Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070694.t1 | XP_013466593.1 | 94.2 | 172 | 10 | 0 | 1 | 172 | 1 | 172 | 9.50E-88 | 332.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070694.t1 | A0A072VF21 | 94.2 | 172 | 10 | 0 | 1 | 172 | 1 | 172 | 6.8e-88 | 332.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene070694 | 0.809202 | 2.13E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene070694 | 0.818793 | 1.63E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene070694 | 0.829685 | 4.48E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene070694 | 0.825768 | 3.91E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene070694 | 0.851427 | 8.94E-61 | -1.69E-46 |
| MS.gene049910 | MS.gene070694 | 0.823789 | 1.15E-53 | -1.69E-46 |
| MS.gene049915 | MS.gene070694 | 0.806527 | 7.88E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene070694 | 0.808233 | 3.43E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene070694 | 0.870504 | 1.39E-66 | -1.69E-46 |
| MS.gene050406 | MS.gene070694 | 0.83882 | 2.29E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene070694 | 0.837975 | 3.78E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene070694 | 0.845181 | 4.77E-59 | -1.69E-46 |
| MS.gene050558 | MS.gene070694 | 0.800569 | 1.36E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene070694 | 0.821982 | 3.02E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene070694 | 0.821181 | 4.63E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene070694 | 0.802161 | 6.40E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene070694 | 0.858815 | 6.36E-63 | -1.69E-46 |
| MS.gene051582 | MS.gene070694 | 0.837361 | 5.44E-57 | -1.69E-46 |
| MS.gene051860 | MS.gene070694 | 0.822719 | 2.04E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene070694 | 0.825077 | 5.71E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene070694 | 0.863781 | 1.95E-64 | -1.69E-46 |
| MS.gene052178 | MS.gene070694 | 0.825943 | 3.56E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene070694 | 0.846962 | 1.56E-59 | -1.69E-46 |
| MS.gene052253 | MS.gene070694 | 0.830682 | 2.56E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene070694 | 0.85711 | 2.04E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene070694 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene070694 | 0.806183 | 9.31E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene070694 | 0.839174 | 1.86E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene070694 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene070694 | 0.825639 | 4.20E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene070694 | 0.87202 | 4.38E-67 | -1.69E-46 |
| MS.gene053928 | MS.gene070694 | 0.836867 | 7.28E-57 | -1.69E-46 |
| MS.gene053971 | MS.gene070694 | 0.817342 | 3.47E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene070694 | 0.834113 | 3.62E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene070694 | 0.8217 | 3.51E-53 | -1.69E-46 |
| MS.gene054918 | MS.gene070694 | 0.817629 | 2.99E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene070694 | 0.815733 | 7.95E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene070694 | 0.817229 | 3.67E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene070694 | 0.860764 | 1.64E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene070694 | 0.831483 | 1.63E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene070694 | 0.801871 | 7.34E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene070694 | 0.875024 | 4.27E-68 | -1.69E-46 |
| MS.gene055428 | MS.gene070694 | 0.873835 | 1.08E-67 | -1.69E-46 |
| MS.gene055604 | MS.gene070694 | 0.807124 | 5.89E-50 | -1.69E-46 |
| MS.gene055712 | MS.gene070694 | 0.819502 | 1.12E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene070694 | 0.811107 | 8.26E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene070694 | 0.847357 | 1.22E-59 | -1.69E-46 |
| MS.gene056451 | MS.gene070694 | 0.816221 | 6.18E-52 | -1.69E-46 |
| MS.gene056497 | MS.gene070694 | 0.831005 | 2.13E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene070694 | 0.856346 | 3.42E-62 | -1.69E-46 |
| MS.gene056899 | MS.gene070694 | -0.802334 | 5.89E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene070694 | 0.856305 | 3.52E-62 | -1.69E-46 |
| MS.gene057121 | MS.gene070694 | 0.830576 | 2.72E-55 | -1.69E-46 |
| MS.gene057123 | MS.gene070694 | 0.812837 | 3.47E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene070694 | 0.839027 | 2.03E-57 | -1.69E-46 |
| MS.gene057295 | MS.gene070694 | 0.80513 | 1.55E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene070694 | 0.805928 | 1.05E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene070694 | 0.833709 | 4.56E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene070694 | 0.802897 | 4.51E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene070694 | 0.808168 | 3.54E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene070694 | 0.809046 | 2.30E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene070694 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene070694 | 0.867831 | 1.02E-65 | -1.69E-46 |
| MS.gene05811 | MS.gene070694 | 0.838751 | 2.39E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene070694 | 0.839232 | 1.79E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene070694 | 0.840688 | 7.48E-58 | -1.69E-46 |
| MS.gene058276 | MS.gene070694 | 0.810735 | 9.94E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene070694 | 0.849283 | 3.57E-60 | -1.69E-46 |
| MS.gene058660 | MS.gene070694 | 0.853052 | 3.08E-61 | -1.69E-46 |
| MS.gene058710 | MS.gene070694 | 0.81585 | 7.48E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene070694 | 0.818588 | 1.81E-52 | -1.69E-46 |
| MS.gene058845 | MS.gene070694 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene070694 | 0.806807 | 6.88E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene070694 | 0.801447 | 8.97E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene070694 | 0.836237 | 1.05E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene070694 | 0.834464 | 2.95E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene070694 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene070694 | 0.837772 | 4.27E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene070694 | 0.848354 | 6.47E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene070694 | 0.805428 | 1.34E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene070694 | 0.85597 | 4.41E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene070694 | 0.864719 | 9.93E-65 | -1.69E-46 |
| MS.gene059695 | MS.gene070694 | 0.864069 | 1.58E-64 | -1.69E-46 |
| MS.gene05984 | MS.gene070694 | 0.844578 | 6.93E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene070694 | 0.852338 | 4.93E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene070694 | 0.835469 | 1.65E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene070694 | 0.814271 | 1.68E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene070694 | 0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene070694 | 0.894246 | 2.95E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070694.t1 | MTR_1g032560 | 94.186 | 172 | 10 | 0 | 1 | 172 | 1 | 172 | 4.45e-112 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070694.t1 | AT2G01755 | 58.475 | 118 | 49 | 0 | 54 | 171 | 56 | 173 | 1.58e-42 | 140 |
| MS.gene070694.t1 | AT2G01755 | 58.475 | 118 | 49 | 0 | 54 | 171 | 62 | 179 | 1.97e-42 | 140 |
Find 46 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTCTATAGATAGAATAAA+AGG | 0.213144 | 1.4:+17086543 | MS.gene070694:CDS |
| ATCAAAGAGGTATAAGCTTT+TGG | 0.314010 | 1.4:+17086032 | MS.gene070694:CDS |
| TAAGTACTTCTACTTCAATT+TGG | 0.331886 | 1.4:-17086198 | None:intergenic |
| GGAAACTTGTCAATTGATAA+TGG | 0.335882 | 1.4:-17085959 | None:intergenic |
| CCATGGCATCATTGTCCATT+TGG | 0.363669 | 1.4:-17085921 | None:intergenic |
| AGAATGCTTCTTGTTGGGTC+AGG | 0.383377 | 1.4:-17086501 | None:intergenic |
| GAAGATAGAGATGATGAGTA+TGG | 0.389990 | 1.4:+17086094 | MS.gene070694:CDS |
| GCTGGAAGAATGCTTCTTGT+TGG | 0.394629 | 1.4:-17086507 | None:intergenic |
| CTTCTGCAGATACTCAATAT+TGG | 0.406034 | 1.4:-17086580 | None:intergenic |
| CTGGAAGAATGCTTCTTGTT+GGG | 0.406470 | 1.4:-17086506 | None:intergenic |
| GACTTTATCACTGCCCTGGC+TGG | 0.412026 | 1.4:-17086525 | None:intergenic |
| TTGTCAATTGATAATGGTAT+AGG | 0.420243 | 1.4:-17085953 | None:intergenic |
| AGTAGAAGTACTTATCTTCA+AGG | 0.426944 | 1.4:+17086207 | MS.gene070694:CDS |
| TGTCCATTTGGCCATACCCT+TGG | 0.430122 | 1.4:-17085909 | None:intergenic |
| TCAATATTGGCAGGGTCAAA+AGG | 0.439860 | 1.4:-17086567 | None:intergenic |
| GTCCATTTGGCCATACCCTT+GGG | 0.442034 | 1.4:-17085908 | None:intergenic |
| CAATGAGGAAATTTCAAAGT+TGG | 0.445765 | 1.4:+17086120 | MS.gene070694:CDS |
| CTCTATCTTCATCCTCATCT+TGG | 0.448503 | 1.4:-17086081 | None:intergenic |
| TGCAGATACTCAATATTGGC+AGG | 0.450870 | 1.4:-17086576 | None:intergenic |
| TTCCCAAGGGTATGGCCAAA+TGG | 0.469349 | 1.4:+17085906 | MS.gene070694:CDS |
| ATACCCTTGGGAAGTGTAGT+AGG | 0.478990 | 1.4:-17085896 | None:intergenic |
| GGACAATGATGCCATGGCCT+AGG | 0.481592 | 1.4:+17085927 | MS.gene070694:CDS |
| CAAGAAGCATTCTTCCAGCC+AGG | 0.483504 | 1.4:+17086511 | MS.gene070694:CDS |
| GAATGCTTCTTGTTGGGTCA+GGG | 0.497042 | 1.4:-17086500 | None:intergenic |
| CACAAGCTTACATTGTGAGT+TGG | 0.506810 | 1.4:-17085980 | None:intergenic |
| AGTCTATAGATAGAATAAAA+GGG | 0.523947 | 1.4:+17086544 | MS.gene070694:CDS |
| AATGCTTCTTGTTGGGTCAG+GGG | 0.544161 | 1.4:-17086499 | None:intergenic |
| TACTACACTTCCCAAGGGTA+TGG | 0.545556 | 1.4:+17085898 | MS.gene070694:CDS |
| TTTGTCTTGAATTCTTCCCA+TGG | 0.554335 | 1.4:-17086609 | None:intergenic |
| ATCTGCAGAAGGATGTTCCA+TGG | 0.555118 | 1.4:+17086592 | MS.gene070694:CDS |
| GATAATGGTATAGGTAGCCT+AGG | 0.559854 | 1.4:-17085944 | None:intergenic |
| TATAGACTTTATCACTGCCC+TGG | 0.571801 | 1.4:-17086529 | None:intergenic |
| ACTCATTGTTCATGCACTTG+TGG | 0.576626 | 1.4:+17086174 | MS.gene070694:CDS |
| GCATCCTACTACACTTCCCA+AGG | 0.594031 | 1.4:+17085892 | MS.gene070694:CDS |
| AAGAAGCATTCTTCCAGCCA+GGG | 0.602074 | 1.4:+17086512 | MS.gene070694:CDS |
| TTCTATAGTCAATCAGCAAG+AGG | 0.607447 | 1.4:+17086145 | MS.gene070694:CDS |
| AGGGGAAGTACCATAGCTCA+AGG | 0.608247 | 1.4:-17086481 | None:intergenic |
| TCTGCAGAAGGATGTTCCAT+GGG | 0.613447 | 1.4:+17086593 | MS.gene070694:CDS |
| CAATATTGAGTATCTGCAGA+AGG | 0.617485 | 1.4:+17086581 | MS.gene070694:CDS |
| CATCCTACTACACTTCCCAA+GGG | 0.625588 | 1.4:+17085893 | MS.gene070694:CDS |
| CCAAATGGACAATGATGCCA+TGG | 0.626699 | 1.4:+17085921 | MS.gene070694:CDS |
| GGTATAGGTAGCCTAGGCCA+TGG | 0.632885 | 1.4:-17085938 | None:intergenic |
| GCAAATTAGATACCAAGATG+AGG | 0.635629 | 1.4:+17086069 | MS.gene070694:CDS |
| TTAGATTTGAGCAATCAAAG+AGG | 0.645074 | 1.4:+17086019 | MS.gene070694:CDS |
| GCAGATACTCAATATTGGCA+GGG | 0.648369 | 1.4:-17086575 | None:intergenic |
| TGATGAGTATGGACACAATG+AGG | 0.651393 | 1.4:+17086105 | MS.gene070694:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATTTGTTTGTTTTAT+TGG | - | chr1.4:17086286-17086305 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCTAATTAGAAAA+AGG | + | chr1.4:17086327-17086346 | MS.gene070694:intron | 10.0% |
| !! | AAGTCTATAGATAGAATAAA+AGG | + | chr1.4:17086543-17086562 | MS.gene070694:CDS | 20.0% |
| !! | AGTCTATAGATAGAATAAAA+GGG | + | chr1.4:17086544-17086563 | MS.gene070694:CDS | 20.0% |
| !!! | TTGTTTGTTTTATTGGTTAT+TGG | - | chr1.4:17086279-17086298 | None:intergenic | 20.0% |
| ! | CCATTTGCAAAACAAAAATT+TGG | - | chr1.4:17086384-17086403 | None:intergenic | 25.0% |
| ! | TAAGTACTTCTACTTCAATT+TGG | - | chr1.4:17086201-17086220 | None:intergenic | 25.0% |
| !!! | CCAAATTTTTGTTTTGCAAA+TGG | + | chr1.4:17086381-17086400 | MS.gene070694:intron | 25.0% |
| !!! | TTGTCAATTGATAATGGTAT+AGG | - | chr1.4:17085956-17085975 | None:intergenic | 25.0% |
| ACTTATCTTCAAGGTAAGTT+TGG | + | chr1.4:17086216-17086235 | MS.gene070694:intron | 30.0% | |
| CAATGAGGAAATTTCAAAGT+TGG | + | chr1.4:17086120-17086139 | MS.gene070694:CDS | 30.0% | |
| GGAAACTTGTCAATTGATAA+TGG | - | chr1.4:17085962-17085981 | None:intergenic | 30.0% | |
| TGACAAACCATTTCATTTCA+GGG | + | chr1.4:17086447-17086466 | MS.gene070694:intron | 30.0% | |
| TTAGATTTGAGCAATCAAAG+AGG | + | chr1.4:17086019-17086038 | MS.gene070694:CDS | 30.0% | |
| !! | AGTAGAAGTACTTATCTTCA+AGG | + | chr1.4:17086207-17086226 | MS.gene070694:CDS | 30.0% |
| !! | ATCAAAGAGGTATAAGCTTT+TGG | + | chr1.4:17086032-17086051 | MS.gene070694:CDS | 30.0% |
| AGAAAACCCCTGAAATGAAA+TGG | - | chr1.4:17086457-17086476 | None:intergenic | 35.0% | |
| CAATATTGAGTATCTGCAGA+AGG | + | chr1.4:17086581-17086600 | MS.gene070694:CDS | 35.0% | |
| CTTCTGCAGATACTCAATAT+TGG | - | chr1.4:17086583-17086602 | None:intergenic | 35.0% | |
| GAAGATAGAGATGATGAGTA+TGG | + | chr1.4:17086094-17086113 | MS.gene070694:CDS | 35.0% | |
| GACAAACCATTTCATTTCAG+GGG | + | chr1.4:17086448-17086467 | MS.gene070694:intron | 35.0% | |
| GCAAATTAGATACCAAGATG+AGG | + | chr1.4:17086069-17086088 | MS.gene070694:CDS | 35.0% | |
| GTGACAAACCATTTCATTTC+AGG | + | chr1.4:17086446-17086465 | MS.gene070694:intron | 35.0% | |
| TTCTATAGTCAATCAGCAAG+AGG | + | chr1.4:17086145-17086164 | MS.gene070694:CDS | 35.0% | |
| TTTGTCTTGAATTCTTCCCA+TGG | - | chr1.4:17086612-17086631 | None:intergenic | 35.0% | |
| ! | TTTTCTTCATCCTTGAGCTA+TGG | + | chr1.4:17086471-17086490 | MS.gene070694:CDS | 35.0% |
| ACTCATTGTTCATGCACTTG+TGG | + | chr1.4:17086174-17086193 | MS.gene070694:CDS | 40.0% | |
| CACAAGCTTACATTGTGAGT+TGG | - | chr1.4:17085983-17086002 | None:intergenic | 40.0% | |
| CTCTATCTTCATCCTCATCT+TGG | - | chr1.4:17086084-17086103 | None:intergenic | 40.0% | |
| CTGGAAGAATGCTTCTTGTT+GGG | - | chr1.4:17086509-17086528 | None:intergenic | 40.0% | |
| GCAGATACTCAATATTGGCA+GGG | - | chr1.4:17086578-17086597 | None:intergenic | 40.0% | |
| TATAGACTTTATCACTGCCC+TGG | - | chr1.4:17086532-17086551 | None:intergenic | 40.0% | |
| TCAATATTGGCAGGGTCAAA+AGG | - | chr1.4:17086570-17086589 | None:intergenic | 40.0% | |
| TGATGAGTATGGACACAATG+AGG | + | chr1.4:17086105-17086124 | MS.gene070694:CDS | 40.0% | |
| TGCAGATACTCAATATTGGC+AGG | - | chr1.4:17086579-17086598 | None:intergenic | 40.0% | |
| ! | GATAATGGTATAGGTAGCCT+AGG | - | chr1.4:17085947-17085966 | None:intergenic | 40.0% |
| !! | AGAGGTATAAGCTTTTGGTG+TGG | + | chr1.4:17086037-17086056 | MS.gene070694:CDS | 40.0% |
| AATGCTTCTTGTTGGGTCAG+GGG | - | chr1.4:17086502-17086521 | None:intergenic | 45.0% | |
| AGAATGCTTCTTGTTGGGTC+AGG | - | chr1.4:17086504-17086523 | None:intergenic | 45.0% | |
| ATCTGCAGAAGGATGTTCCA+TGG | + | chr1.4:17086592-17086611 | MS.gene070694:CDS | 45.0% | |
| CATCCTACTACACTTCCCAA+GGG | + | chr1.4:17085893-17085912 | MS.gene070694:CDS | 45.0% | |
| CCAAATGGACAATGATGCCA+TGG | + | chr1.4:17085921-17085940 | MS.gene070694:CDS | 45.0% | |
| CCATGGCATCATTGTCCATT+TGG | - | chr1.4:17085924-17085943 | None:intergenic | 45.0% | |
| GAATGCTTCTTGTTGGGTCA+GGG | - | chr1.4:17086503-17086522 | None:intergenic | 45.0% | |
| GCTGGAAGAATGCTTCTTGT+TGG | - | chr1.4:17086510-17086529 | None:intergenic | 45.0% | |
| TACTACACTTCCCAAGGGTA+TGG | + | chr1.4:17085898-17085917 | MS.gene070694:CDS | 45.0% | |
| TCTGCAGAAGGATGTTCCAT+GGG | + | chr1.4:17086593-17086612 | MS.gene070694:CDS | 45.0% | |
| ! | ATACCCTTGGGAAGTGTAGT+AGG | - | chr1.4:17085899-17085918 | None:intergenic | 45.0% |
| !! | AAGAAGCATTCTTCCAGCCA+GGG | + | chr1.4:17086512-17086531 | MS.gene070694:CDS | 45.0% |
| !! | TAAGCTTTTGGTGTGGAGCA+AGG | + | chr1.4:17086044-17086063 | MS.gene070694:CDS | 45.0% |
| GCATCCTACTACACTTCCCA+AGG | + | chr1.4:17085892-17085911 | MS.gene070694:CDS | 50.0% | |
| GTCCATTTGGCCATACCCTT+GGG | - | chr1.4:17085911-17085930 | None:intergenic | 50.0% | |
| TGTCCATTTGGCCATACCCT+TGG | - | chr1.4:17085912-17085931 | None:intergenic | 50.0% | |
| ! | TTCCCAAGGGTATGGCCAAA+TGG | + | chr1.4:17085906-17085925 | MS.gene070694:CDS | 50.0% |
| !! | AGGGGAAGTACCATAGCTCA+AGG | - | chr1.4:17086484-17086503 | None:intergenic | 50.0% |
| !! | CAAGAAGCATTCTTCCAGCC+AGG | + | chr1.4:17086511-17086530 | MS.gene070694:CDS | 50.0% |
| GACTTTATCACTGCCCTGGC+TGG | - | chr1.4:17086528-17086547 | None:intergenic | 55.0% | |
| GGACAATGATGCCATGGCCT+AGG | + | chr1.4:17085927-17085946 | MS.gene070694:CDS | 55.0% | |
| GGTATAGGTAGCCTAGGCCA+TGG | - | chr1.4:17085941-17085960 | None:intergenic | 55.0% | |
| !! | GCTTTTGGTGTGGAGCAAGG+AGG | + | chr1.4:17086047-17086066 | MS.gene070694:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 17085890 | 17086647 | 17085890 | ID=MS.gene070694 |
| chr1.4 | mRNA | 17085890 | 17086647 | 17085890 | ID=MS.gene070694.t1;Parent=MS.gene070694 |
| chr1.4 | exon | 17085890 | 17086228 | 17085890 | ID=MS.gene070694.t1.exon1;Parent=MS.gene070694.t1 |
| chr1.4 | CDS | 17085890 | 17086228 | 17085890 | ID=cds.MS.gene070694.t1;Parent=MS.gene070694.t1 |
| chr1.4 | exon | 17086468 | 17086647 | 17086468 | ID=MS.gene070694.t1.exon2;Parent=MS.gene070694.t1 |
| chr1.4 | CDS | 17086468 | 17086647 | 17086468 | ID=cds.MS.gene070694.t1;Parent=MS.gene070694.t1 |
| Gene Sequence |
| Protein sequence |
