Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071810.t1 | XP_013444864.1 | 93.6 | 481 | 26 | 2 | 3 | 478 | 16 | 496 | 4.50E-273 | 949.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071810.t1 | B0X1Q4 | 24.4 | 353 | 231 | 8 | 79 | 413 | 68 | 402 | 2.9e-26 | 121.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071810.t1 | A0A072TN43 | 93.6 | 481 | 26 | 2 | 3 | 478 | 16 | 496 | 3.3e-273 | 949.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene071810 | -0.806675 | 7.33E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene071810 | 0.812464 | 4.18E-51 | -1.69E-46 |
| MS.gene049259 | MS.gene071810 | 0.832602 | 8.61E-56 | -1.69E-46 |
| MS.gene049281 | MS.gene071810 | 0.858902 | 5.99E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene071810 | -0.813114 | 3.02E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene071810 | -0.841456 | 4.70E-58 | -1.69E-46 |
| MS.gene049483 | MS.gene071810 | 0.80588 | 1.08E-49 | -1.69E-46 |
| MS.gene049710 | MS.gene071810 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene04986 | MS.gene071810 | 0.809909 | 1.50E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene071810 | -0.802815 | 4.69E-49 | -1.69E-46 |
| MS.gene050129 | MS.gene071810 | 0.800421 | 1.45E-48 | -1.69E-46 |
| MS.gene05015 | MS.gene071810 | 0.811109 | 8.25E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene071810 | -0.821078 | 4.89E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene071810 | -0.826508 | 2.61E-54 | -1.69E-46 |
| MS.gene050173 | MS.gene071810 | 0.840392 | 8.94E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene071810 | -0.800759 | 1.24E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene071810 | 0.824117 | 9.60E-54 | -1.69E-46 |
| MS.gene050493 | MS.gene071810 | 0.819808 | 9.56E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene071810 | -0.842627 | 2.30E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene071810 | -0.856645 | 2.80E-62 | -1.69E-46 |
| MS.gene050675 | MS.gene071810 | -0.819977 | 8.75E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene071810 | -0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene050832 | MS.gene071810 | 0.820027 | 8.52E-53 | -1.69E-46 |
| MS.gene050833 | MS.gene071810 | 0.815171 | 1.06E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene071810 | 0.836784 | 7.64E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene071810 | -0.826483 | 2.65E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene071810 | 0.855731 | 5.18E-62 | -1.69E-46 |
| MS.gene051127 | MS.gene071810 | 0.85316 | 2.87E-61 | -1.69E-46 |
| MS.gene051138 | MS.gene071810 | 0.808022 | 3.80E-50 | -1.69E-46 |
| MS.gene05114 | MS.gene071810 | 0.804238 | 2.38E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene071810 | 0.803942 | 2.74E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene071810 | 0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene071810 | -0.831778 | 1.38E-55 | -1.69E-46 |
| MS.gene052916 | MS.gene071810 | -0.832181 | 1.09E-55 | -1.69E-46 |
| MS.gene053069 | MS.gene071810 | 0.805682 | 1.19E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene071810 | 0.818305 | 2.10E-52 | -1.69E-46 |
| MS.gene053488 | MS.gene071810 | 0.815308 | 9.88E-52 | -1.69E-46 |
| MS.gene053561 | MS.gene071810 | 0.868294 | 7.27E-66 | -1.69E-46 |
| MS.gene054056 | MS.gene071810 | 0.889172 | 3.07E-73 | -1.69E-46 |
| MS.gene054616 | MS.gene071810 | 0.805686 | 1.18E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene071810 | -0.819585 | 1.07E-52 | -1.69E-46 |
| MS.gene054708 | MS.gene071810 | 0.820728 | 5.88E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene071810 | -0.830142 | 3.47E-55 | -1.69E-46 |
| MS.gene054959 | MS.gene071810 | 0.84646 | 2.14E-59 | -1.69E-46 |
| MS.gene055124 | MS.gene071810 | 0.802109 | 6.56E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene071810 | 0.83171 | 1.43E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene071810 | -0.833121 | 6.40E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene071810 | -0.810014 | 1.42E-50 | -1.69E-46 |
| MS.gene055550 | MS.gene071810 | 0.803133 | 4.03E-49 | -1.69E-46 |
| MS.gene055776 | MS.gene071810 | -0.837516 | 4.96E-57 | -1.69E-46 |
| MS.gene055942 | MS.gene071810 | 0.898143 | 7.08E-77 | -1.69E-46 |
| MS.gene055956 | MS.gene071810 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene071810 | -0.818895 | 1.54E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene071810 | -0.821299 | 4.35E-53 | -1.69E-46 |
| MS.gene056761 | MS.gene071810 | 0.95752 | 2.23E-115 | -1.69E-46 |
| MS.gene058099 | MS.gene071810 | 0.804813 | 1.80E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene071810 | 0.804866 | 1.76E-49 | -1.69E-46 |
| MS.gene058268 | MS.gene071810 | 0.836644 | 8.29E-57 | -1.69E-46 |
| MS.gene058269 | MS.gene071810 | 0.822165 | 2.74E-53 | -1.69E-46 |
| MS.gene058341 | MS.gene071810 | 0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene071810 | -0.813946 | 1.98E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene071810 | 0.823692 | 1.21E-53 | -1.69E-46 |
| MS.gene058629 | MS.gene071810 | 0.822898 | 1.85E-53 | -1.69E-46 |
| MS.gene058630 | MS.gene071810 | 0.815835 | 7.54E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene071810 | -0.801939 | 7.11E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene071810 | -0.860143 | 2.54E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene071810 | -0.840292 | 9.50E-58 | -1.69E-46 |
| MS.gene059690 | MS.gene071810 | 0.816435 | 5.54E-52 | -1.69E-46 |
| MS.gene059691 | MS.gene071810 | 0.805209 | 1.49E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene071810 | 0.821484 | 3.94E-53 | -1.69E-46 |
| MS.gene059697 | MS.gene071810 | 0.82289 | 1.86E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene071810 | -0.840597 | 7.90E-58 | -1.69E-46 |
| MS.gene060337 | MS.gene071810 | 0.854927 | 8.88E-62 | -1.69E-46 |
| MS.gene060703 | MS.gene071810 | -0.824051 | 9.95E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene071810 | -0.8019 | 7.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071810.t1 | MTR_8g031290 | 95.879 | 461 | 18 | 1 | 19 | 478 | 36 | 496 | 0.0 | 932 |
| MS.gene071810.t1 | MTR_7g076890 | 61.463 | 410 | 153 | 3 | 45 | 450 | 18 | 426 | 0.0 | 573 |
| MS.gene071810.t1 | MTR_7g076860 | 64.230 | 383 | 135 | 1 | 70 | 450 | 14 | 396 | 0.0 | 560 |
| MS.gene071810.t1 | MTR_8g031450 | 57.666 | 437 | 181 | 4 | 35 | 470 | 68 | 501 | 0.0 | 558 |
| MS.gene071810.t1 | MTR_8g031470 | 58.102 | 432 | 176 | 5 | 42 | 470 | 55 | 484 | 0.0 | 536 |
| MS.gene071810.t1 | MTR_0014s0440 | 53.882 | 425 | 195 | 1 | 47 | 470 | 59 | 483 | 0.0 | 527 |
| MS.gene071810.t1 | MTR_0014s0440 | 53.882 | 425 | 195 | 1 | 47 | 470 | 70 | 494 | 0.0 | 526 |
| MS.gene071810.t1 | MTR_5g010500 | 51.129 | 487 | 198 | 8 | 8 | 470 | 21 | 491 | 2.78e-177 | 507 |
| MS.gene071810.t1 | MTR_8g031470 | 52.315 | 432 | 164 | 6 | 42 | 470 | 55 | 447 | 6.21e-160 | 461 |
| MS.gene071810.t1 | MTR_3g464000 | 43.829 | 397 | 207 | 7 | 52 | 446 | 81 | 463 | 8.39e-120 | 359 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071810.t1 | AT5G23850 | 55.083 | 423 | 185 | 2 | 47 | 464 | 99 | 521 | 0.0 | 535 |
| MS.gene071810.t1 | AT2G45830 | 50.520 | 481 | 218 | 5 | 6 | 470 | 31 | 507 | 0.0 | 533 |
| MS.gene071810.t1 | AT2G45830 | 50.520 | 481 | 218 | 5 | 6 | 470 | 31 | 507 | 0.0 | 533 |
| MS.gene071810.t1 | AT3G48980 | 48.936 | 470 | 227 | 5 | 14 | 470 | 55 | 524 | 1.07e-179 | 514 |
| MS.gene071810.t1 | AT3G48980 | 48.936 | 470 | 227 | 5 | 14 | 470 | 61 | 530 | 1.38e-179 | 514 |
| MS.gene071810.t1 | AT3G61270 | 49.254 | 469 | 229 | 4 | 5 | 470 | 22 | 484 | 1.43e-179 | 512 |
| MS.gene071810.t1 | AT2G45830 | 56.284 | 366 | 160 | 0 | 105 | 470 | 1 | 366 | 5.65e-169 | 481 |
| MS.gene071810.t1 | AT2G45830 | 56.284 | 366 | 160 | 0 | 105 | 470 | 1 | 366 | 5.65e-169 | 481 |
| MS.gene071810.t1 | AT2G45830 | 56.284 | 366 | 160 | 0 | 105 | 470 | 1 | 366 | 5.65e-169 | 481 |
| MS.gene071810.t1 | AT2G45830 | 56.284 | 366 | 160 | 0 | 105 | 470 | 1 | 366 | 5.65e-169 | 481 |
| MS.gene071810.t1 | AT3G61280 | 51.636 | 428 | 200 | 4 | 49 | 470 | 97 | 523 | 1.01e-166 | 481 |
| MS.gene071810.t1 | AT1G63420 | 52.235 | 425 | 192 | 4 | 56 | 470 | 144 | 567 | 1.95e-164 | 477 |
| MS.gene071810.t1 | AT2G45840 | 49.065 | 428 | 205 | 5 | 50 | 470 | 86 | 507 | 7.90e-160 | 463 |
| MS.gene071810.t1 | AT3G61290 | 50.353 | 425 | 202 | 4 | 51 | 470 | 17 | 437 | 8.38e-160 | 461 |
| MS.gene071810.t1 | AT3G61270 | 54.645 | 366 | 165 | 1 | 105 | 470 | 1 | 365 | 1.17e-157 | 452 |
| MS.gene071810.t1 | AT1G07220 | 45.411 | 414 | 212 | 7 | 68 | 476 | 97 | 501 | 2.38e-131 | 390 |
| MS.gene071810.t1 | AT1G63420 | 55.556 | 315 | 134 | 3 | 56 | 365 | 144 | 457 | 9.79e-126 | 374 |
| MS.gene071810.t1 | AT3G61280 | 50.929 | 269 | 125 | 4 | 49 | 311 | 97 | 364 | 5.96e-96 | 295 |
Find 87 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATCCATTTGAAGTAATT+TGG | 0.125619 | 8.3:-64199833 | None:intergenic |
| ATAGAATACCTTATGCATTT+TGG | 0.203852 | 8.3:+64200748 | MS.gene071810:CDS |
| TGAAGAGTTTGAGTTGTATA+AGG | 0.263143 | 8.3:-64202320 | None:intergenic |
| AAATTTCCAAGACACAAAAT+TGG | 0.265181 | 8.3:+64200982 | MS.gene071810:CDS |
| CAAGGGATGTGTTCACAATA+TGG | 0.273614 | 8.3:+64199990 | MS.gene071810:CDS |
| CCACTATAACTCTTTATTCA+TGG | 0.313202 | 8.3:-64202393 | None:intergenic |
| TGCTACCTTTGCAGCACTAT+TGG | 0.319041 | 8.3:+64201275 | MS.gene071810:CDS |
| GATTAAGTTTGCTGTGGATT+GGG | 0.331917 | 8.3:+64201327 | MS.gene071810:CDS |
| AAGGAACATGCCATACTTTC+AGG | 0.348711 | 8.3:-64202218 | None:intergenic |
| AATAGTAGTGCTTGTTACTT+TGG | 0.349075 | 8.3:-64199666 | None:intergenic |
| CAAATTATCTATGATGTACT+TGG | 0.368613 | 8.3:-64202093 | None:intergenic |
| TGGAAAATCAATGTACCTAT+AGG | 0.373614 | 8.3:+64201002 | MS.gene071810:CDS |
| CCCATGGTTTAAGATCTTCA+TGG | 0.374163 | 8.3:-64199853 | None:intergenic |
| TGAGGTTTGTCCTGAAAGTA+TGG | 0.374705 | 8.3:+64202208 | MS.gene071810:CDS |
| CATGTCCAAATTACTTCAAA+TGG | 0.391281 | 8.3:+64199828 | MS.gene071810:CDS |
| CTGATTGGACCTTCTGGGGT+TGG | 0.400885 | 8.3:+64200188 | MS.gene071810:CDS |
| AAATATAATGAGGATGATAA+TGG | 0.407056 | 8.3:-64198942 | None:intergenic |
| AGATTAAGTTTGCTGTGGAT+TGG | 0.407167 | 8.3:+64201326 | MS.gene071810:CDS |
| AGCATTCCAATCATGTTCTT+CGG | 0.418553 | 8.3:-64200826 | None:intergenic |
| TTTCTAATGGGAGATACTGC+TGG | 0.418858 | 8.3:-64200780 | None:intergenic |
| TCATCAATTTCTACAAGAAA+AGG | 0.421386 | 8.3:+64202340 | MS.gene071810:CDS |
| TGTTGCAAGCTCTTTCATCT+TGG | 0.431465 | 8.3:+64198964 | MS.gene071810:CDS |
| AAGGGATGTGTTCACAATAT+GGG | 0.434287 | 8.3:+64199991 | MS.gene071810:CDS |
| TTTCCCTTCCAAAATGCATA+AGG | 0.448374 | 8.3:-64200756 | None:intergenic |
| GTTTCATTGTTGCAATTTAG+TGG | 0.450629 | 8.3:-64199737 | None:intergenic |
| GTGATTCCTGTACTCTCCCA+TGG | 0.451274 | 8.3:-64199869 | None:intergenic |
| CAAACCTCAACCGCTCCTTC+AGG | 0.454990 | 8.3:-64202194 | None:intergenic |
| AGATGGACAAGTTGAGTTTG+AGG | 0.459852 | 8.3:-64199759 | None:intergenic |
| ATGCATCCGAAGAACATGAT+TGG | 0.460625 | 8.3:+64200820 | MS.gene071810:CDS |
| CAACCCCAGAAGGTCCAATC+AGG | 0.463664 | 8.3:-64200187 | None:intergenic |
| AAGGAAACATTTCATGGTTG+AGG | 0.463785 | 8.3:+64202250 | MS.gene071810:CDS |
| ACATTTCATGGTTGAGGGCA+TGG | 0.463967 | 8.3:+64202256 | MS.gene071810:CDS |
| TACAGGAATCACAAGAGAAA+TGG | 0.468277 | 8.3:+64199880 | MS.gene071810:CDS |
| TGAAACATTAGCTCCAAATC+AGG | 0.477112 | 8.3:-64200052 | None:intergenic |
| TTGCGTAATGTTGTTTCCCA+TGG | 0.478952 | 8.3:-64200690 | None:intergenic |
| TTGTTTCCCATGGTCTTATG+TGG | 0.487471 | 8.3:-64200680 | None:intergenic |
| AGGAAACATTTCATGGTTGA+GGG | 0.488331 | 8.3:+64202251 | MS.gene071810:CDS |
| GTTTGAGTTGTATAAGGAGA+AGG | 0.488706 | 8.3:-64202314 | None:intergenic |
| TTTCATTGTTGCAATTTAGT+GGG | 0.508924 | 8.3:-64199736 | None:intergenic |
| AAGGCAACAAGAATGTCAAA+TGG | 0.510499 | 8.3:+64200721 | MS.gene071810:CDS |
| CATTGAGATGAAATGTTGTT+GGG | 0.512315 | 8.3:-64199787 | None:intergenic |
| TCATTGAGATGAAATGTTGT+TGG | 0.516754 | 8.3:-64199788 | None:intergenic |
| GTAAAGAAATCATAGTACTT+AGG | 0.517978 | 8.3:-64201244 | None:intergenic |
| TGGTGCAAGGAAACATTTCA+TGG | 0.530997 | 8.3:+64202244 | MS.gene071810:CDS |
| TTTAGGCTTGTGGTTGTGGA+TGG | 0.532168 | 8.3:+64199929 | MS.gene071810:CDS |
| ATTAAGTTTGCTGTGGATTG+GGG | 0.532995 | 8.3:+64201328 | MS.gene071810:CDS |
| AATACCTGAAGGAGCGGTTG+AGG | 0.538729 | 8.3:+64202190 | MS.gene071810:CDS |
| TTTCCTGATTGGACCTTCTG+GGG | 0.541065 | 8.3:+64200184 | MS.gene071810:CDS |
| AATGTTGTTGGGTAGGAAGA+TGG | 0.541971 | 8.3:-64199776 | None:intergenic |
| GGTACAAGATTTATGCAGAA+GGG | 0.544570 | 8.3:+64201158 | MS.gene071810:intron |
| AAGAAAAGGAGAATTTAATA+CGG | 0.545091 | 8.3:+64202354 | MS.gene071810:CDS |
| ATGTTTCCTTGCACCACGCA+AGG | 0.545435 | 8.3:-64202237 | None:intergenic |
| CCATGAATAAAGAGTTATAG+TGG | 0.549650 | 8.3:+64202393 | MS.gene071810:CDS |
| ACAAGAGAAATGGTTGAAAG+AGG | 0.550127 | 8.3:+64199890 | MS.gene071810:CDS |
| TTGCAATTTAGTGGGAATTG+AGG | 0.550148 | 8.3:-64199728 | None:intergenic |
| AGAATATGGTTACTTTGTCA+AGG | 0.554555 | 8.3:-64201360 | None:intergenic |
| CTTAAACCATGGGAGAGTAC+AGG | 0.560350 | 8.3:+64199863 | MS.gene071810:CDS |
| TCCATGAAGATCTTAAACCA+TGG | 0.568320 | 8.3:+64199852 | MS.gene071810:CDS |
| ATGCAAAATCTTATCAAACA+AGG | 0.570824 | 8.3:+64199972 | MS.gene071810:CDS |
| TAAGGAGAAGGCATTGTGCA+TGG | 0.571719 | 8.3:-64202302 | None:intergenic |
| GAAGTAATTTGGACATGATG+AGG | 0.572075 | 8.3:-64199822 | None:intergenic |
| CAACAAGAATGTCAAATGGA+AGG | 0.574995 | 8.3:+64200725 | MS.gene071810:CDS |
| TGCAAAATCTTATCAAACAA+GGG | 0.578981 | 8.3:+64199973 | MS.gene071810:CDS |
| ATAGGCCAATAGTGCTGCAA+AGG | 0.583181 | 8.3:-64201280 | None:intergenic |
| CCATGAAGATCTTAAACCAT+GGG | 0.585334 | 8.3:+64199853 | MS.gene071810:CDS |
| AGGTACAAGATTTATGCAGA+AGG | 0.585736 | 8.3:+64201157 | MS.gene071810:intron |
| AATGAGGATGATAATGGAGA+AGG | 0.589688 | 8.3:-64198936 | None:intergenic |
| CTGAGCTCCACATAAGACCA+TGG | 0.593513 | 8.3:+64200673 | MS.gene071810:CDS |
| TGAAGAGATTAAGTTTGCTG+TGG | 0.597774 | 8.3:+64201321 | MS.gene071810:CDS |
| AGGCTCTATGAACATAGTCA+TGG | 0.599927 | 8.3:-64201224 | None:intergenic |
| AGCTTGCAACAAATATAATG+AGG | 0.602790 | 8.3:-64198952 | None:intergenic |
| GAGATGAAATGTTGTTGGGT+AGG | 0.604359 | 8.3:-64199783 | None:intergenic |
| GTACAAGATTTATGCAGAAG+GGG | 0.604983 | 8.3:+64201159 | MS.gene071810:CDS |
| AGGGATGTGTTCACAATATG+GGG | 0.609928 | 8.3:+64199992 | MS.gene071810:CDS |
| CATGTTCCTTGCGTGGTGCA+AGG | 0.615342 | 8.3:+64202231 | MS.gene071810:CDS |
| ACATTACGCAATATACAAGA+AGG | 0.621681 | 8.3:+64200702 | MS.gene071810:CDS |
| TAATACGGCAAGTGAAGACA+AGG | 0.621694 | 8.3:+64202369 | MS.gene071810:CDS |
| GAAGCTTTACCAACCCCAGA+AGG | 0.627314 | 8.3:-64200197 | None:intergenic |
| TGTTGAACATAATGACGAGA+TGG | 0.629125 | 8.3:+64198909 | None:intergenic |
| TGAGCTCCACATAAGACCAT+GGG | 0.632573 | 8.3:+64200674 | MS.gene071810:CDS |
| TAATTTGGACATGATGAGGA+TGG | 0.632954 | 8.3:-64199818 | None:intergenic |
| TTTATGCAGAAGGGGCAACA+TGG | 0.637122 | 8.3:+64201167 | MS.gene071810:CDS |
| GTGCATGGAGGTGTATCACT+TGG | 0.687133 | 8.3:-64202287 | None:intergenic |
| AGTATGGCATGTTCCTTGCG+TGG | 0.688064 | 8.3:+64202224 | MS.gene071810:CDS |
| GGAGAAGGCATTGTGCATGG+AGG | 0.725676 | 8.3:-64202299 | None:intergenic |
| TTGGAGCTAATGTTTCAATG+TGG | 0.748673 | 8.3:+64200058 | MS.gene071810:CDS |
| AATACGGCAAGTGAAGACAA+GGG | 0.753746 | 8.3:+64202370 | MS.gene071810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATAATATTTTAAAATT+TGG | + | chr8.3:64200444-64200463 | MS.gene071810:intron | 0.0% |
| !! | TAAAATGATGAATTAATATT+GGG | + | chr8.3:64199254-64199273 | MS.gene071810:intron | 10.0% |
| !! | TTAAAATGATGAATTAATAT+TGG | + | chr8.3:64199253-64199272 | MS.gene071810:intron | 10.0% |
| !!! | AAACTTTTTTTTTTTAAACT+CGG | - | chr8.3:64201844-64201863 | None:intergenic | 10.0% |
| !!! | ATATTAATTCATCATTTTAA+TGG | - | chr8.3:64199253-64199272 | None:intergenic | 10.0% |
| !!! | TTTACATTTTTTTCTTTTTA+GGG | + | chr8.3:64200650-64200669 | MS.gene071810:intron | 10.0% |
| !! | AAAATGATGAATTAATATTG+GGG | + | chr8.3:64199255-64199274 | MS.gene071810:intron | 15.0% |
| !! | ATACATTTAATTCCAATTAA+AGG | - | chr8.3:64200228-64200247 | None:intergenic | 15.0% |
| !! | ATTATTAAAGATATGAATGA+AGG | - | chr8.3:64199116-64199135 | None:intergenic | 15.0% |
| !! | TACATTTAATTCCAATTAAA+GGG | - | chr8.3:64200227-64200246 | None:intergenic | 15.0% |
| !! | TTATTAAAGATATGAATGAA+GGG | - | chr8.3:64199115-64199134 | None:intergenic | 15.0% |
| !!! | ATCTTTAATAATCTTTTTCT+TGG | + | chr8.3:64199124-64199143 | MS.gene071810:intron | 15.0% |
| !!! | GTTTACATTTTTTTCTTTTT+AGG | + | chr8.3:64200649-64200668 | MS.gene071810:intron | 15.0% |
| !!! | TTATAATATAGTTTTGTTCT+GGG | + | chr8.3:64201498-64201517 | MS.gene071810:intron | 15.0% |
| !!! | TTTATAATATAGTTTTGTTC+TGG | + | chr8.3:64201497-64201516 | MS.gene071810:intron | 15.0% |
| !! | AAAATTATTTGCATACCTAT+AGG | - | chr8.3:64201020-64201039 | None:intergenic | 20.0% |
| !! | AAACATAACCTTAGTTTAAT+TGG | + | chr8.3:64201909-64201928 | MS.gene071810:intron | 20.0% |
| !! | AAATATAATGAGGATGATAA+TGG | - | chr8.3:64198945-64198964 | None:intergenic | 20.0% |
| !! | AAGAAAAGGAGAATTTAATA+CGG | + | chr8.3:64202354-64202373 | MS.gene071810:CDS | 20.0% |
| !! | ACCTAAAATCAAAATGATTT+AGG | + | chr8.3:64200391-64200410 | MS.gene071810:intron | 20.0% |
| !! | AGTAATTAACCAGTAAATAT+TGG | - | chr8.3:64201952-64201971 | None:intergenic | 20.0% |
| !! | GTTTGTGTTGAAATTATTTA+TGG | - | chr8.3:64200488-64200507 | None:intergenic | 20.0% |
| !! | TCTAATTAAAGTGAAATAGA+AGG | + | chr8.3:64200611-64200630 | MS.gene071810:intron | 20.0% |
| !!! | GCAAGTCATATTTTTTTTTT+TGG | + | chr8.3:64200253-64200272 | MS.gene071810:intron | 20.0% |
| !!! | TAAATCATTTTGATTTTAGG+TGG | - | chr8.3:64200392-64200411 | None:intergenic | 20.0% |
| !!! | TTTTTATGATTATTTGTGCA+TGG | + | chr8.3:64200546-64200565 | MS.gene071810:intron | 20.0% |
| ! | AAATTTCCAAGACACAAAAT+TGG | + | chr8.3:64200982-64201001 | MS.gene071810:CDS | 25.0% |
| ! | AATTGAGTCCAATTAAACTA+AGG | - | chr8.3:64201920-64201939 | None:intergenic | 25.0% |
| ! | ATCAATATGTCACATACTAA+TGG | - | chr8.3:64199190-64199209 | None:intergenic | 25.0% |
| ! | ATGCAAAATCTTATCAAACA+AGG | + | chr8.3:64199972-64199991 | MS.gene071810:CDS | 25.0% |
| ! | ATTGGAATTAAATGTATCAC+TGG | + | chr8.3:64200231-64200250 | MS.gene071810:intron | 25.0% |
| ! | CAAATTATCTATGATGTACT+TGG | - | chr8.3:64202096-64202115 | None:intergenic | 25.0% |
| ! | GTAAAGAAATCATAGTACTT+AGG | - | chr8.3:64201247-64201266 | None:intergenic | 25.0% |
| ! | GTAACCTATATATAGATCAA+AGG | + | chr8.3:64199460-64199479 | MS.gene071810:intron | 25.0% |
| ! | TAGAACATTGAGAAAGAATA+TGG | - | chr8.3:64201377-64201396 | None:intergenic | 25.0% |
| ! | TCAACCTTTGATCTATATAT+AGG | - | chr8.3:64199467-64199486 | None:intergenic | 25.0% |
| ! | TCAATATGTCACATACTAAT+GGG | - | chr8.3:64199189-64199208 | None:intergenic | 25.0% |
| ! | TCATCAATTTCTACAAGAAA+AGG | + | chr8.3:64202340-64202359 | MS.gene071810:CDS | 25.0% |
| ! | TCTCCACAATAATGAAAAAT+AGG | - | chr8.3:64200142-64200161 | None:intergenic | 25.0% |
| ! | TGAAATATGATAGACTTACA+AGG | - | chr8.3:64198997-64199016 | None:intergenic | 25.0% |
| ! | TGCAAAATCTTATCAAACAA+GGG | + | chr8.3:64199973-64199992 | MS.gene071810:CDS | 25.0% |
| ! | TGGACAAGAAAAAATTTCAA+GGG | + | chr8.3:64200095-64200114 | MS.gene071810:CDS | 25.0% |
| ! | TTAAATTCTCTTGCTTACTA+AGG | + | chr8.3:64201998-64202017 | MS.gene071810:intron | 25.0% |
| ! | TTTCATTGTTGCAATTTAGT+GGG | - | chr8.3:64199739-64199758 | None:intergenic | 25.0% |
| !! | ATAGAATACCTTATGCATTT+TGG | + | chr8.3:64200748-64200767 | MS.gene071810:CDS | 25.0% |
| !! | ATGTGTCATGTTTTATGTTA+AGG | + | chr8.3:64201137-64201156 | MS.gene071810:intron | 25.0% |
| !! | GAAAAAACATGTCACATTTT+AGG | + | chr8.3:64199912-64199931 | MS.gene071810:CDS | 25.0% |
| !! | TGAATTTCGTCTTTGAAAAA+TGG | - | chr8.3:64200915-64200934 | None:intergenic | 25.0% |
| !!! | GCCTAAATCATTTTGATTTT+AGG | - | chr8.3:64200395-64200414 | None:intergenic | 25.0% |
| !!! | TTAGCATTACATTTTGATGT+AGG | + | chr8.3:64199497-64199516 | MS.gene071810:intron | 25.0% |
| !!! | TTTTCGAGTTCTTTTCTAAT+GGG | - | chr8.3:64200795-64200814 | None:intergenic | 25.0% |
| AAGCTTCTATTCCCTTTAAT+TGG | + | chr8.3:64200213-64200232 | MS.gene071810:intron | 30.0% | |
| AAGGTTATGTTTGTGTATGT+AGG | - | chr8.3:64201901-64201920 | None:intergenic | 30.0% | |
| AATTATGACAATTGAGGGAA+AGG | - | chr8.3:64199164-64199183 | None:intergenic | 30.0% | |
| ACATTACGCAATATACAAGA+AGG | + | chr8.3:64200702-64200721 | MS.gene071810:CDS | 30.0% | |
| ACATTCTAGCCAATATTTAC+TGG | + | chr8.3:64201940-64201959 | MS.gene071810:intron | 30.0% | |
| ACCAGATTGAAAAAATCTCA+CGG | + | chr8.3:64199301-64199320 | MS.gene071810:intron | 30.0% | |
| ACTAGAAACAAAAACAAGCA+TGG | - | chr8.3:64199084-64199103 | None:intergenic | 30.0% | |
| AGCTTGCAACAAATATAATG+AGG | - | chr8.3:64198955-64198974 | None:intergenic | 30.0% | |
| CAATAATGAAAAATAGGTGG+AGG | - | chr8.3:64200136-64200155 | None:intergenic | 30.0% | |
| CATGTCCAAATTACTTCAAA+TGG | + | chr8.3:64199828-64199847 | MS.gene071810:CDS | 30.0% | |
| CATTGAGATGAAATGTTGTT+GGG | - | chr8.3:64199790-64199809 | None:intergenic | 30.0% | |
| CCAACAATATTATTAACTGC+AGG | + | chr8.3:64202046-64202065 | MS.gene071810:intron | 30.0% | |
| CCACAATAATGAAAAATAGG+TGG | - | chr8.3:64200139-64200158 | None:intergenic | 30.0% | |
| CCTGCAGTTAATAATATTGT+TGG | - | chr8.3:64202049-64202068 | None:intergenic | 30.0% | |
| GTGGACAAGAAAAAATTTCA+AGG | + | chr8.3:64200094-64200113 | MS.gene071810:CDS | 30.0% | |
| GTTATAGATGTTACATGCTT+TGG | + | chr8.3:64199058-64199077 | MS.gene071810:intron | 30.0% | |
| GTTTCATTGTTGCAATTTAG+TGG | - | chr8.3:64199740-64199759 | None:intergenic | 30.0% | |
| TATGAACAGACTAATATGAG+TGG | - | chr8.3:64201812-64201831 | None:intergenic | 30.0% | |
| TCAATGTGGTGATAAAAATG+TGG | + | chr8.3:64200072-64200091 | MS.gene071810:CDS | 30.0% | |
| TCATTGAGATGAAATGTTGT+TGG | - | chr8.3:64199791-64199810 | None:intergenic | 30.0% | |
| TGGAAAATCAATGTACCTAT+AGG | + | chr8.3:64201002-64201021 | MS.gene071810:CDS | 30.0% | |
| TGTTCCACAATAACCAATTT+GGG | + | chr8.3:64201635-64201654 | MS.gene071810:intron | 30.0% | |
| TTACTAAGGAAAACAACACT+TGG | + | chr8.3:64202012-64202031 | MS.gene071810:intron | 30.0% | |
| TTCAAACCAAAAATACCTGA+AGG | + | chr8.3:64202179-64202198 | MS.gene071810:CDS | 30.0% | |
| TTGTTCCACAATAACCAATT+TGG | + | chr8.3:64201634-64201653 | MS.gene071810:intron | 30.0% | |
| ! | AATACCTTATGCATTTTGGA+AGG | + | chr8.3:64200752-64200771 | MS.gene071810:CDS | 30.0% |
| ! | AATAGTAGTGCTTGTTACTT+TGG | - | chr8.3:64199669-64199688 | None:intergenic | 30.0% |
| ! | AATCTCTTCACACATGTTTT+TGG | - | chr8.3:64201311-64201330 | None:intergenic | 30.0% |
| ! | AGAATATGGTTACTTTGTCA+AGG | - | chr8.3:64201363-64201382 | None:intergenic | 30.0% |
| ! | GATTTTCCAATTTTGTGTCT+TGG | - | chr8.3:64200991-64201010 | None:intergenic | 30.0% |
| ! | GGGGAATTTTACAACTTTTA+AGG | + | chr8.3:64200011-64200030 | MS.gene071810:CDS | 30.0% |
| ! | TGGATCCATTTGAAGTAATT+TGG | - | chr8.3:64199836-64199855 | None:intergenic | 30.0% |
| !! | ATACCTTATGCATTTTGGAA+GGG | + | chr8.3:64200753-64200772 | MS.gene071810:CDS | 30.0% |
| !! | CCACCTATTTTTCATTATTG+TGG | + | chr8.3:64200136-64200155 | MS.gene071810:CDS | 30.0% |
| !! | TGAAGAGTTTGAGTTGTATA+AGG | - | chr8.3:64202323-64202342 | None:intergenic | 30.0% |
| !! | TTGACATTGTTTTTCCTGAT+TGG | + | chr8.3:64200173-64200192 | MS.gene071810:CDS | 30.0% |
| !!! | CTTTTCGAGTTCTTTTCTAA+TGG | - | chr8.3:64200796-64200815 | None:intergenic | 30.0% |
| AAGGAAACATTTCATGGTTG+AGG | + | chr8.3:64202250-64202269 | MS.gene071810:CDS | 35.0% | |
| AAGGCAACAAGAATGTCAAA+TGG | + | chr8.3:64200721-64200740 | MS.gene071810:CDS | 35.0% | |
| AAGGGATGTGTTCACAATAT+GGG | + | chr8.3:64199991-64200010 | MS.gene071810:CDS | 35.0% | |
| ACAAGAGAAATGGTTGAAAG+AGG | + | chr8.3:64199890-64199909 | MS.gene071810:CDS | 35.0% | |
| ACTACTGAAATTGACACTAG+GGG | - | chr8.3:64201724-64201743 | None:intergenic | 35.0% | |
| AGCATTCCAATCATGTTCTT+CGG | - | chr8.3:64200829-64200848 | None:intergenic | 35.0% | |
| AGGAAACATTTCATGGTTGA+GGG | + | chr8.3:64202251-64202270 | MS.gene071810:CDS | 35.0% | |
| AGGTACAAGATTTATGCAGA+AGG | + | chr8.3:64201157-64201176 | MS.gene071810:intron | 35.0% | |
| ATGTGGTGATAAAAATGTGG+TGG | + | chr8.3:64200075-64200094 | MS.gene071810:CDS | 35.0% | |
| ATTCTCTTCAGTGCCAATTT+AGG | + | chr8.3:64201577-64201596 | MS.gene071810:intron | 35.0% | |
| CAACAAGAATGTCAAATGGA+AGG | + | chr8.3:64200725-64200744 | MS.gene071810:CDS | 35.0% | |
| CCATGAAGATCTTAAACCAT+GGG | + | chr8.3:64199853-64199872 | MS.gene071810:CDS | 35.0% | |
| CTAAATTAGCCCACCTAAAT+TGG | - | chr8.3:64201593-64201612 | None:intergenic | 35.0% | |
| GAAGTAATTTGGACATGATG+AGG | - | chr8.3:64199825-64199844 | None:intergenic | 35.0% | |
| GACTACTGAAATTGACACTA+GGG | - | chr8.3:64201725-64201744 | None:intergenic | 35.0% | |
| GATTGAAAAAATCTCACGGT+CGG | + | chr8.3:64199305-64199324 | MS.gene071810:intron | 35.0% | |
| GGGAGAATTATGACAATTGA+GGG | - | chr8.3:64199169-64199188 | None:intergenic | 35.0% | |
| GGTACAAGATTTATGCAGAA+GGG | + | chr8.3:64201158-64201177 | MS.gene071810:intron | 35.0% | |
| GTACAAGATTTATGCAGAAG+GGG | + | chr8.3:64201159-64201178 | MS.gene071810:CDS | 35.0% | |
| GTTCCACAATAACCAATTTG+GGG | + | chr8.3:64201636-64201655 | MS.gene071810:intron | 35.0% | |
| GTTGCGACTGTTAATTAGTA+TGG | + | chr8.3:64199438-64199457 | MS.gene071810:intron | 35.0% | |
| TAACTGCAGGCACAAAAAAT+TGG | + | chr8.3:64202059-64202078 | MS.gene071810:intron | 35.0% | |
| TAATTTGGACATGATGAGGA+TGG | - | chr8.3:64199821-64199840 | None:intergenic | 35.0% | |
| TACAGGAATCACAAGAGAAA+TGG | + | chr8.3:64199880-64199899 | MS.gene071810:CDS | 35.0% | |
| TCCATGAAGATCTTAAACCA+TGG | + | chr8.3:64199852-64199871 | MS.gene071810:CDS | 35.0% | |
| TCTTTAGTTACATTTCGTCG+TGG | + | chr8.3:64199416-64199435 | MS.gene071810:intron | 35.0% | |
| TGAAACATTAGCTCCAAATC+AGG | - | chr8.3:64200055-64200074 | None:intergenic | 35.0% | |
| TGACATATTGATGAAGAGAG+TGG | + | chr8.3:64199198-64199217 | MS.gene071810:intron | 35.0% | |
| TGACTACTGAAATTGACACT+AGG | - | chr8.3:64201726-64201745 | None:intergenic | 35.0% | |
| TGGGAGAATTATGACAATTG+AGG | - | chr8.3:64199170-64199189 | None:intergenic | 35.0% | |
| TTGCAATTTAGTGGGAATTG+AGG | - | chr8.3:64199731-64199750 | None:intergenic | 35.0% | |
| TTGGAGCTAATGTTTCAATG+TGG | + | chr8.3:64200058-64200077 | MS.gene071810:CDS | 35.0% | |
| TTTCCCTTCCAAAATGCATA+AGG | - | chr8.3:64200759-64200778 | None:intergenic | 35.0% | |
| ! | AGAAGCAGTTAAGATTTGCT+TGG | + | chr8.3:64200363-64200382 | MS.gene071810:intron | 35.0% |
| ! | CCAAATCAGGTATTTTTCCA+GGG | - | chr8.3:64200042-64200061 | None:intergenic | 35.0% |
| ! | TCCAAATCAGGTATTTTTCC+AGG | - | chr8.3:64200043-64200062 | None:intergenic | 35.0% |
| ! | TGCATGGTTCAACTTCATTT+TGG | - | chr8.3:64201871-64201890 | None:intergenic | 35.0% |
| ! | TTTTTGCTCCTTTTCAGCAA+TGG | + | chr8.3:64200942-64200961 | MS.gene071810:intron | 35.0% |
| !! | AATGAGGATGATAATGGAGA+AGG | - | chr8.3:64198939-64198958 | None:intergenic | 35.0% |
| !! | AGATTAAGTTTGCTGTGGAT+TGG | + | chr8.3:64201326-64201345 | MS.gene071810:CDS | 35.0% |
| !! | ATTAAGTTTGCTGTGGATTG+GGG | + | chr8.3:64201328-64201347 | MS.gene071810:CDS | 35.0% |
| !! | GATTAAGTTTGCTGTGGATT+GGG | + | chr8.3:64201327-64201346 | MS.gene071810:CDS | 35.0% |
| !! | GTTTGAGTTGTATAAGGAGA+AGG | - | chr8.3:64202317-64202336 | None:intergenic | 35.0% |
| !! | TGAAGAGATTAAGTTTGCTG+TGG | + | chr8.3:64201321-64201340 | MS.gene071810:CDS | 35.0% |
| !!! | ACCGTGAGATTTTTTCAATC+TGG | - | chr8.3:64199305-64199324 | None:intergenic | 35.0% |
| AACCTCTTGTCTCTATCTCA+GGG | - | chr8.3:64199353-64199372 | None:intergenic | 40.0% | |
| AAGATCTCAAACCAACCACT+AGG | - | chr8.3:64201666-64201685 | None:intergenic | 40.0% | |
| AAGGAACATGCCATACTTTC+AGG | - | chr8.3:64202221-64202240 | None:intergenic | 40.0% | |
| AATACGGCAAGTGAAGACAA+GGG | + | chr8.3:64202370-64202389 | MS.gene071810:CDS | 40.0% | |
| AATATTGGGGCAATCTGAGA+GGG | + | chr8.3:64199268-64199287 | MS.gene071810:intron | 40.0% | |
| AATGTTGTTGGGTAGGAAGA+TGG | - | chr8.3:64199779-64199798 | None:intergenic | 40.0% | |
| ACCAAAAATACCTGAAGGAG+CGG | + | chr8.3:64202184-64202203 | MS.gene071810:CDS | 40.0% | |
| AGGCTCTATGAACATAGTCA+TGG | - | chr8.3:64201227-64201246 | None:intergenic | 40.0% | |
| AGGGATGTGTTCACAATATG+GGG | + | chr8.3:64199992-64200011 | MS.gene071810:CDS | 40.0% | |
| ATGCATCCGAAGAACATGAT+TGG | + | chr8.3:64200820-64200839 | MS.gene071810:CDS | 40.0% | |
| CAACCCCAAATTGGTTATTG+TGG | - | chr8.3:64201642-64201661 | None:intergenic | 40.0% | |
| CAAGGGATGTGTTCACAATA+TGG | + | chr8.3:64199990-64200009 | MS.gene071810:CDS | 40.0% | |
| CAGGCACAAAAAATTGGAGA+AGG | + | chr8.3:64202065-64202084 | MS.gene071810:intron | 40.0% | |
| CATATTGATGAAGAGAGTGG+AGG | + | chr8.3:64199201-64199220 | MS.gene071810:intron | 40.0% | |
| CCCTGGAAAAATACCTGATT+TGG | + | chr8.3:64200039-64200058 | MS.gene071810:CDS | 40.0% | |
| CTACTGAAATTGACACTAGG+GGG | - | chr8.3:64201723-64201742 | None:intergenic | 40.0% | |
| GAGATGAAATGTTGTTGGGT+AGG | - | chr8.3:64199786-64199805 | None:intergenic | 40.0% | |
| GCACAAAAAATTGGAGAAGG+AGG | + | chr8.3:64202068-64202087 | MS.gene071810:CDS | 40.0% | |
| GTATGTAGGAACAAAGTGCA+TGG | - | chr8.3:64201887-64201906 | None:intergenic | 40.0% | |
| TAATACGGCAAGTGAAGACA+AGG | + | chr8.3:64202369-64202388 | MS.gene071810:CDS | 40.0% | |
| TAATATTGGGGCAATCTGAG+AGG | + | chr8.3:64199267-64199286 | MS.gene071810:intron | 40.0% | |
| TCTTCAGTGCCAATTTAGGT+GGG | + | chr8.3:64201581-64201600 | MS.gene071810:intron | 40.0% | |
| TGACAATTGAGGGAAAGGAA+AGG | - | chr8.3:64199159-64199178 | None:intergenic | 40.0% | |
| TGAGGTTTGTCCTGAAAGTA+TGG | + | chr8.3:64202208-64202227 | MS.gene071810:CDS | 40.0% | |
| TGGTGCAAGGAAACATTTCA+TGG | + | chr8.3:64202244-64202263 | MS.gene071810:CDS | 40.0% | |
| TGTTGCAAGCTCTTTCATCT+TGG | + | chr8.3:64198964-64198983 | MS.gene071810:CDS | 40.0% | |
| TTACTCGAAACAAAAGCGAG+AGG | - | chr8.3:64200886-64200905 | None:intergenic | 40.0% | |
| TTTCTAATGGGAGATACTGC+TGG | - | chr8.3:64200783-64200802 | None:intergenic | 40.0% | |
| ! | ACATTTTAGGCTTGTGGTTG+TGG | + | chr8.3:64199925-64199944 | MS.gene071810:CDS | 40.0% |
| ! | AGATGGACAAGTTGAGTTTG+AGG | - | chr8.3:64199762-64199781 | None:intergenic | 40.0% |
| ! | CATGTCACATTTTAGGCTTG+TGG | + | chr8.3:64199919-64199938 | MS.gene071810:CDS | 40.0% |
| ! | CCCATGGTTTAAGATCTTCA+TGG | - | chr8.3:64199856-64199875 | None:intergenic | 40.0% |
| ! | CTTGGAGTTTGTTTCTCTCA+AGG | + | chr8.3:64201683-64201702 | MS.gene071810:intron | 40.0% |
| ! | TTTTCCTGATTGGACCTTCT+GGG | + | chr8.3:64200183-64200202 | MS.gene071810:CDS | 40.0% |
| ! | TTTTTCCTGATTGGACCTTC+TGG | + | chr8.3:64200182-64200201 | MS.gene071810:CDS | 40.0% |
| !! | TAGTGGTTGGTTTGAGATCT+TGG | + | chr8.3:64201665-64201684 | MS.gene071810:intron | 40.0% |
| !! | TTGCGTAATGTTGTTTCCCA+TGG | - | chr8.3:64200693-64200712 | None:intergenic | 40.0% |
| !! | TTGTTTCCCATGGTCTTATG+TGG | - | chr8.3:64200683-64200702 | None:intergenic | 40.0% |
| !!! | ATAGTTTTGTTCTGGGAGTG+TGG | + | chr8.3:64201505-64201524 | MS.gene071810:intron | 40.0% |
| !!! | CAACTTTTAAGGTTGTACCC+TGG | + | chr8.3:64200022-64200041 | MS.gene071810:CDS | 40.0% |
| !!! | CACATGTTTTTGGCACTGAT+AGG | - | chr8.3:64201301-64201320 | None:intergenic | 40.0% |
| !!! | GAATCGATTTTGAGACCTCA+AGG | - | chr8.3:64201561-64201580 | None:intergenic | 40.0% |
| AAAAAATCTCACGGTCGGTG+AGG | + | chr8.3:64199310-64199329 | MS.gene071810:intron | 45.0% | |
| AAAAATCTCACGGTCGGTGA+GGG | + | chr8.3:64199311-64199330 | MS.gene071810:intron | 45.0% | |
| ACATTTCATGGTTGAGGGCA+TGG | + | chr8.3:64202256-64202275 | MS.gene071810:CDS | 45.0% | |
| ATAGGCCAATAGTGCTGCAA+AGG | - | chr8.3:64201283-64201302 | None:intergenic | 45.0% | |
| CTCTTCAGTGCCAATTTAGG+TGG | + | chr8.3:64201580-64201599 | MS.gene071810:intron | 45.0% | |
| GAACCTCTTGTCTCTATCTC+AGG | - | chr8.3:64199354-64199373 | None:intergenic | 45.0% | |
| TCCTGTTGCCATTGCTGAAA+AGG | - | chr8.3:64200953-64200972 | None:intergenic | 45.0% | |
| TGAGCTCCACATAAGACCAT+GGG | + | chr8.3:64200674-64200693 | MS.gene071810:CDS | 45.0% | |
| TGCTACCTTTGCAGCACTAT+TGG | + | chr8.3:64201275-64201294 | MS.gene071810:CDS | 45.0% | |
| TTAATGGGGCTCCTACAAGT+GGG | + | chr8.3:64201773-64201792 | MS.gene071810:intron | 45.0% | |
| TTTAATGGGGCTCCTACAAG+TGG | + | chr8.3:64201772-64201791 | MS.gene071810:intron | 45.0% | |
| TTTAGGCTTGTGGTTGTGGA+TGG | + | chr8.3:64199929-64199948 | MS.gene071810:CDS | 45.0% | |
| TTTATGCAGAAGGGGCAACA+TGG | + | chr8.3:64201167-64201186 | MS.gene071810:CDS | 45.0% | |
| TTTCCTGATTGGACCTTCTG+GGG | + | chr8.3:64200184-64200203 | MS.gene071810:CDS | 45.0% | |
| ! | ACCGCTCCTTCAGGTATTTT+TGG | - | chr8.3:64202188-64202207 | None:intergenic | 45.0% |
| ! | CTTAAACCATGGGAGAGTAC+AGG | + | chr8.3:64199863-64199882 | MS.gene071810:CDS | 45.0% |
| ! | TCCTTTTCAGCAATGGCAAC+AGG | + | chr8.3:64200949-64200968 | MS.gene071810:intron | 45.0% |
| !! | TAAGGAGAAGGCATTGTGCA+TGG | - | chr8.3:64202305-64202324 | None:intergenic | 45.0% |
| !!! | TATTATAGTTTTTTTTTTTT+TGG | - | chr8.3:64200332-64200351 | None:intergenic | 5.0% |
| AAAATCTCACGGTCGGTGAG+GGG | + | chr8.3:64199312-64199331 | MS.gene071810:intron | 50.0% | |
| AATACCTGAAGGAGCGGTTG+AGG | + | chr8.3:64202190-64202209 | MS.gene071810:CDS | 50.0% | |
| AGCCCTGAGATAGAGACAAG+AGG | + | chr8.3:64199348-64199367 | MS.gene071810:intron | 50.0% | |
| AGTATGGCATGTTCCTTGCG+TGG | + | chr8.3:64202224-64202243 | MS.gene071810:CDS | 50.0% | |
| ATGTTTCCTTGCACCACGCA+AGG | - | chr8.3:64202240-64202259 | None:intergenic | 50.0% | |
| CCACTAGGTCAACCCCAAAT+TGG | - | chr8.3:64201651-64201670 | None:intergenic | 50.0% | |
| CCCCATTAAAAGCCAGAGCA+GGG | - | chr8.3:64201762-64201781 | None:intergenic | 50.0% | |
| CTGAGCTCCACATAAGACCA+TGG | + | chr8.3:64200673-64200692 | MS.gene071810:CDS | 50.0% | |
| GAAGCTTTACCAACCCCAGA+AGG | - | chr8.3:64200200-64200219 | None:intergenic | 50.0% | |
| GTGATTCCTGTACTCTCCCA+TGG | - | chr8.3:64199872-64199891 | None:intergenic | 50.0% | |
| ! | CCAATTTGGGGTTGACCTAG+TGG | + | chr8.3:64201648-64201667 | MS.gene071810:intron | 50.0% |
| ! | GGTGGAGGTGACACATTTTC+TGG | - | chr8.3:64200121-64200140 | None:intergenic | 50.0% |
| ! | GTGCATGGAGGTGTATCACT+TGG | - | chr8.3:64202290-64202309 | None:intergenic | 50.0% |
| ! | TGAGAGTGTGCTCTTCCTTG+AGG | + | chr8.3:64201543-64201562 | MS.gene071810:intron | 50.0% |
| ! | TTTGGGGTTGACCTAGTGGT+TGG | + | chr8.3:64201652-64201671 | MS.gene071810:intron | 50.0% |
| !!! | AGCCCTGCTCTGGCTTTTAA+TGG | + | chr8.3:64201757-64201776 | MS.gene071810:intron | 50.0% |
| !!! | CCCTGCTCTGGCTTTTAATG+GGG | + | chr8.3:64201759-64201778 | MS.gene071810:intron | 50.0% |
| !!! | GCCCTGCTCTGGCTTTTAAT+GGG | + | chr8.3:64201758-64201777 | MS.gene071810:intron | 50.0% |
| CAAACCTCAACCGCTCCTTC+AGG | - | chr8.3:64202197-64202216 | None:intergenic | 55.0% | |
| CAACCCCAGAAGGTCCAATC+AGG | - | chr8.3:64200190-64200209 | None:intergenic | 55.0% | |
| CATGTTCCTTGCGTGGTGCA+AGG | + | chr8.3:64202231-64202250 | MS.gene071810:CDS | 55.0% | |
| GCCCCATTAAAAGCCAGAGC+AGG | - | chr8.3:64201763-64201782 | None:intergenic | 55.0% | |
| !! | CTGATTGGACCTTCTGGGGT+TGG | + | chr8.3:64200188-64200207 | MS.gene071810:CDS | 55.0% |
| !! | GGAGAAGGCATTGTGCATGG+AGG | - | chr8.3:64202302-64202321 | None:intergenic | 55.0% |
| AGCCAGAGCAGGGCTCTGTA+TGG | - | chr8.3:64201752-64201771 | None:intergenic | 60.0% | |
| ATGGGGCTCCTACAAGTGGG+CGG | + | chr8.3:64201776-64201795 | MS.gene071810:intron | 60.0% | |
| CAATCCCACCGCCCACTTGT+AGG | - | chr8.3:64201787-64201806 | None:intergenic | 60.0% | |
| CTACAAGTGGGCGGTGGGAT+TGG | + | chr8.3:64201785-64201804 | MS.gene071810:intron | 60.0% | |
| GTCCATACAGAGCCCTGCTC+TGG | + | chr8.3:64201747-64201766 | MS.gene071810:intron | 60.0% | |
| ATCTCACGGTCGGTGAGGGG+TGG | + | chr8.3:64199315-64199334 | MS.gene071810:intron | 65.0% | |
| GGCTCCTACAAGTGGGCGGT+GGG | + | chr8.3:64201780-64201799 | MS.gene071810:intron | 65.0% | |
| TCTCACGGTCGGTGAGGGGT+GGG | + | chr8.3:64199316-64199335 | MS.gene071810:intron | 65.0% | |
| CTCACGGTCGGTGAGGGGTG+GGG | + | chr8.3:64199317-64199336 | MS.gene071810:intron | 70.0% | |
| GGGCTCCTACAAGTGGGCGG+TGG | + | chr8.3:64201779-64201798 | MS.gene071810:intron | 70.0% | |
| GGTCGGTGAGGGGTGGGGAC+TGG | + | chr8.3:64199322-64199341 | MS.gene071810:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 64198920 | 64202412 | 64198920 | ID=MS.gene071810 |
| chr8.3 | mRNA | 64198920 | 64202412 | 64198920 | ID=MS.gene071810.t1;Parent=MS.gene071810 |
| chr8.3 | exon | 64198920 | 64198997 | 64198920 | ID=MS.gene071810.t1.exon1;Parent=MS.gene071810.t1 |
| chr8.3 | CDS | 64198920 | 64198997 | 64198920 | ID=cds.MS.gene071810.t1;Parent=MS.gene071810.t1 |
| chr8.3 | exon | 64199665 | 64200209 | 64199665 | ID=MS.gene071810.t1.exon2;Parent=MS.gene071810.t1 |
| chr8.3 | CDS | 64199665 | 64200209 | 64199665 | ID=cds.MS.gene071810.t1;Parent=MS.gene071810.t1 |
| chr8.3 | exon | 64200671 | 64200863 | 64200671 | ID=MS.gene071810.t1.exon3;Parent=MS.gene071810.t1 |
| chr8.3 | CDS | 64200671 | 64200863 | 64200671 | ID=cds.MS.gene071810.t1;Parent=MS.gene071810.t1 |
| chr8.3 | exon | 64200959 | 64201023 | 64200959 | ID=MS.gene071810.t1.exon4;Parent=MS.gene071810.t1 |
| chr8.3 | CDS | 64200959 | 64201023 | 64200959 | ID=cds.MS.gene071810.t1;Parent=MS.gene071810.t1 |
| chr8.3 | exon | 64201159 | 64201369 | 64201159 | ID=MS.gene071810.t1.exon5;Parent=MS.gene071810.t1 |
| chr8.3 | CDS | 64201159 | 64201369 | 64201159 | ID=cds.MS.gene071810.t1;Parent=MS.gene071810.t1 |
| chr8.3 | exon | 64202068 | 64202412 | 64202068 | ID=MS.gene071810.t1.exon6;Parent=MS.gene071810.t1 |
| chr8.3 | CDS | 64202068 | 64202412 | 64202068 | ID=cds.MS.gene071810.t1;Parent=MS.gene071810.t1 |
| Gene Sequence |
| Protein sequence |
