Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073894.t1 | XP_003590158.1 | 96.9 | 127 | 4 | 0 | 1 | 127 | 1 | 127 | 2.50E-61 | 244.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073894.t1 | Q9SL05 | 75.9 | 133 | 23 | 4 | 2 | 127 | 3 | 133 | 1.5e-46 | 186.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073894.t1 | G7I6M5 | 96.9 | 127 | 4 | 0 | 1 | 127 | 1 | 127 | 1.8e-61 | 244.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene073894 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene073894 | 0.82456 | 7.55E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene073894 | 0.840209 | 9.98E-58 | -1.69E-46 |
| MS.gene049396 | MS.gene073894 | 0.85506 | 8.13E-62 | -1.69E-46 |
| MS.gene049488 | MS.gene073894 | 0.813661 | 2.29E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene073894 | 0.831987 | 1.22E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene073894 | 0.851086 | 1.12E-60 | -1.69E-46 |
| MS.gene050060 | MS.gene073894 | 0.808203 | 3.48E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene073894 | 0.808118 | 3.62E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene073894 | 0.815685 | 8.15E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene073894 | 0.823172 | 1.60E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene073894 | 0.813501 | 2.48E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene073894 | 0.830471 | 2.88E-55 | -1.69E-46 |
| MS.gene051692 | MS.gene073894 | 0.846137 | 2.62E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene073894 | 0.805941 | 1.05E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene073894 | 0.846738 | 1.80E-59 | -1.69E-46 |
| MS.gene052136 | MS.gene073894 | 0.801058 | 1.08E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene073894 | 0.806092 | 9.73E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene073894 | 0.813239 | 2.83E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene073894 | 0.817249 | 3.64E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene073894 | -0.828684 | 7.84E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene073894 | 0.86394 | 1.74E-64 | -1.69E-46 |
| MS.gene052421 | MS.gene073894 | 0.854387 | 1.27E-61 | -1.69E-46 |
| MS.gene052501 | MS.gene073894 | 0.807455 | 5.01E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene073894 | 0.80338 | 3.58E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene073894 | 0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene073894 | 0.803805 | 2.92E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene073894 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene073894 | 0.813186 | 2.91E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene073894 | 0.823834 | 1.12E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene073894 | 0.872623 | 2.76E-67 | -1.69E-46 |
| MS.gene053505 | MS.gene073894 | 0.817649 | 2.96E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene073894 | 0.817099 | 3.93E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene073894 | 0.800456 | 1.43E-48 | -1.69E-46 |
| MS.gene053813 | MS.gene073894 | 0.812618 | 3.87E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene073894 | 0.814064 | 1.86E-51 | -1.69E-46 |
| MS.gene053889 | MS.gene073894 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene053912 | MS.gene073894 | 0.871398 | 7.05E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene073894 | 0.837572 | 4.80E-57 | -1.69E-46 |
| MS.gene05494 | MS.gene073894 | 0.814951 | 1.19E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene073894 | 0.834425 | 3.02E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene073894 | 0.806056 | 9.90E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene073894 | 0.820426 | 6.90E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene073894 | 0.82726 | 1.73E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene073894 | 0.829833 | 4.13E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene073894 | 0.837573 | 4.80E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene073894 | 0.836192 | 1.08E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene073894 | 0.827942 | 1.18E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene073894 | 0.833778 | 4.39E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene073894 | 0.840178 | 1.02E-57 | -1.69E-46 |
| MS.gene05664 | MS.gene073894 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene073894 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene073894 | 0.815809 | 7.64E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene073894 | 0.818524 | 1.87E-52 | -1.69E-46 |
| MS.gene057086 | MS.gene073894 | 0.871691 | 5.63E-67 | -1.69E-46 |
| MS.gene057124 | MS.gene073894 | 0.826844 | 2.17E-54 | -1.69E-46 |
| MS.gene057289 | MS.gene073894 | 0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene073894 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene073894 | 0.859457 | 4.08E-63 | -1.69E-46 |
| MS.gene057749 | MS.gene073894 | 0.824852 | 6.45E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene073894 | 0.831832 | 1.33E-55 | -1.69E-46 |
| MS.gene057825 | MS.gene073894 | 0.806993 | 6.28E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene073894 | 0.852848 | 3.53E-61 | -1.69E-46 |
| MS.gene058120 | MS.gene073894 | 0.816264 | 6.05E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene073894 | 0.817643 | 2.96E-52 | -1.69E-46 |
| MS.gene058459 | MS.gene073894 | 0.812906 | 3.35E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene073894 | 0.811393 | 7.16E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene073894 | 0.838259 | 3.20E-57 | -1.69E-46 |
| MS.gene058995 | MS.gene073894 | 0.800868 | 1.18E-48 | -1.69E-46 |
| MS.gene059367 | MS.gene073894 | 0.801821 | 7.51E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene073894 | 0.824587 | 7.45E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene073894 | -0.814252 | 1.69E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene073894 | 0.86054 | 1.92E-63 | -1.69E-46 |
| MS.gene059674 | MS.gene073894 | 0.842848 | 2.01E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene073894 | 0.80482 | 1.80E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene073894 | 0.841548 | 4.44E-58 | -1.69E-46 |
| MS.gene060372 | MS.gene073894 | 0.872956 | 2.13E-67 | -1.69E-46 |
| MS.gene060403 | MS.gene073894 | 0.830597 | 2.68E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene073894 | 0.804681 | 1.92E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene073894 | 0.8382 | 3.31E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene073894 | 0.843635 | 1.24E-58 | -1.69E-46 |
| MS.gene06097 | MS.gene073894 | 0.859959 | 2.88E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073894.t1 | MTR_1g045140 | 96.850 | 127 | 4 | 0 | 1 | 127 | 1 | 127 | 3.94e-89 | 254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073894.t1 | AT2G05620 | 75.940 | 133 | 23 | 4 | 2 | 127 | 3 | 133 | 8.71e-66 | 196 |
| MS.gene073894.t1 | AT2G05620 | 75.940 | 133 | 23 | 4 | 2 | 127 | 3 | 133 | 8.71e-66 | 196 |
Find 29 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGTTTCAATCAGCTTAG+AGG | 0.319386 | 1.3:-26742516 | MS.gene073894:CDS |
| TCATTAACATTCTTCATCAT+AGG | 0.355579 | 1.3:+26742594 | None:intergenic |
| ACTGAATTCTGCAAATCAAT+AGG | 0.397917 | 1.3:-26741340 | MS.gene073894:CDS |
| AACAGAGACAAGGGCTGATT+AGG | 0.411490 | 1.3:-26741306 | MS.gene073894:CDS |
| TGTGTTGGTTCATCATTCTA+TGG | 0.416628 | 1.3:-26742720 | MS.gene073894:CDS |
| GCCACTTCAATCTCTGCAAC+AGG | 0.418962 | 1.3:-26742744 | MS.gene073894:CDS |
| ATCTCTGCAACAGGTTGTGT+TGG | 0.422671 | 1.3:-26742735 | MS.gene073894:CDS |
| TTACGAGTAACCACAACAAT+TGG | 0.430918 | 1.3:+26742552 | None:intergenic |
| AGCCATTGCTTTACACTCTC+AGG | 0.432190 | 1.3:-26742490 | MS.gene073894:intron |
| GTTCATCATTCTATGGAAGC+TGG | 0.445752 | 1.3:-26742713 | MS.gene073894:CDS |
| GTTTCTTCGCAAGTTCGTAT+TGG | 0.470806 | 1.3:-26742645 | MS.gene073894:CDS |
| GTGGTTACTCGTAATATTGT+TGG | 0.474864 | 1.3:-26742543 | MS.gene073894:CDS |
| ATCATAGGTTGCAACCTCAC+TGG | 0.491055 | 1.3:+26742609 | None:intergenic |
| TTCATCATTCTATGGAAGCT+GGG | 0.491238 | 1.3:-26742712 | MS.gene073894:CDS |
| ATTAGGTTGGCTAAGAAGAA+TGG | 0.501313 | 1.3:-26741289 | MS.gene073894:CDS |
| ATGATGAAGAATGTTAATGA+AGG | 0.502442 | 1.3:-26742591 | MS.gene073894:CDS |
| AGCTGGGGAACATCTATAGT+TGG | 0.521344 | 1.3:-26742696 | MS.gene073894:CDS |
| AAGAAGAATGGAGAATGGCT+TGG | 0.545873 | 1.3:-26741277 | MS.gene073894:CDS |
| AAGAATGTTAATGAAGGGAA+AGG | 0.566696 | 1.3:-26742585 | MS.gene073894:CDS |
| GAGACAAGGGCTGATTAGGT+TGG | 0.587941 | 1.3:-26741302 | MS.gene073894:CDS |
| TGGTGAAGATTACAGCATGT+TGG | 0.600796 | 1.3:-26742676 | MS.gene073894:CDS |
| TGGCTAAGAAGAATGGAGAA+TGG | 0.601122 | 1.3:-26741282 | MS.gene073894:CDS |
| TGATGAAGAATGTTAATGAA+GGG | 0.601637 | 1.3:-26742590 | MS.gene073894:CDS |
| CACCTGAGAGTGTAAAGCAA+TGG | 0.607087 | 1.3:+26742488 | None:intergenic |
| ACCTGTTGCAGAGATTGAAG+TGG | 0.616422 | 1.3:+26742743 | None:intergenic |
| TCATCATTCTATGGAAGCTG+GGG | 0.629743 | 1.3:-26742711 | MS.gene073894:CDS |
| GCAGATGCAAAACAGAGACA+AGG | 0.641927 | 1.3:-26741316 | MS.gene073894:CDS |
| CAGATGCAAAACAGAGACAA+GGG | 0.659781 | 1.3:-26741315 | MS.gene073894:CDS |
| GAAGAGTTAGTAAGCCAGTG+AGG | 0.661265 | 1.3:-26742623 | MS.gene073894:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTATTTAAAAAATTTGT+GGG | - | chr1.3:26741790-26741809 | MS.gene073894:intron | 10.0% |
| !! | TTACTTATTTAAAAAATTTG+TGG | - | chr1.3:26741789-26741808 | MS.gene073894:intron | 10.0% |
| !! | ATTCAAAAAAACACATTTCT+AGG | - | chr1.3:26741932-26741951 | MS.gene073894:intron | 20.0% |
| !! | ATTTGTGTGAATAAAATTGA+TGG | - | chr1.3:26742589-26742608 | MS.gene073894:CDS | 20.0% |
| !! | TAAAACTAAAGAATTTGAGA+TGG | - | chr1.3:26741974-26741993 | MS.gene073894:intron | 20.0% |
| !! | TCAAGTACAATATATCAAAA+GGG | - | chr1.3:26741748-26741767 | MS.gene073894:intron | 20.0% |
| !! | TTCAAAAAAACACATTTCTA+GGG | - | chr1.3:26741933-26741952 | MS.gene073894:intron | 20.0% |
| !! | TTCAAGTACAATATATCAAA+AGG | - | chr1.3:26741747-26741766 | MS.gene073894:intron | 20.0% |
| !! | TTGTTAATTAAAGTGATACT+AGG | - | chr1.3:26741826-26741845 | MS.gene073894:intron | 20.0% |
| !!! | AAACTAAATTTTTTCTCTCA+AGG | - | chr1.3:26741850-26741869 | MS.gene073894:intron | 20.0% |
| !!! | TAGTTTATAGTTGATATTTG+CGG | - | chr1.3:26742033-26742052 | MS.gene073894:intron | 20.0% |
| !!! | TTATATGATTCTCTAGAATT+AGG | - | chr1.3:26741654-26741673 | MS.gene073894:intron | 20.0% |
| !!! | TTTCATATTTTGAAATCTGT+AGG | - | chr1.3:26742643-26742662 | MS.gene073894:CDS | 20.0% |
| ! | ATGATGAAGAATGTTAATGA+AGG | - | chr1.3:26741420-26741439 | MS.gene073894:intron | 25.0% |
| ! | ATGTGGTTTATATGTTTCAA+TGG | - | chr1.3:26741682-26741701 | MS.gene073894:intron | 25.0% |
| ! | CTAACATATGATAAGAGATT+GGG | - | chr1.3:26742401-26742420 | MS.gene073894:intron | 25.0% |
| ! | GAAATTTATTGTCACAACTT+AGG | - | chr1.3:26741620-26741639 | MS.gene073894:intron | 25.0% |
| ! | GAATAAAATTGATGGAAGAA+TGG | - | chr1.3:26742597-26742616 | MS.gene073894:CDS | 25.0% |
| ! | TAACATATGATAAGAGATTG+GGG | - | chr1.3:26742402-26742421 | MS.gene073894:intron | 25.0% |
| ! | TCATTAACATTCTTCATCAT+AGG | + | chr1.3:26741420-26741439 | None:intergenic | 25.0% |
| ! | TCTAACATATGATAAGAGAT+TGG | - | chr1.3:26742400-26742419 | MS.gene073894:intron | 25.0% |
| ! | TGATGAAATATGTTGAAAAG+AGG | - | chr1.3:26741724-26741743 | MS.gene073894:intron | 25.0% |
| ! | TGATGAAGAATGTTAATGAA+GGG | - | chr1.3:26741421-26741440 | MS.gene073894:intron | 25.0% |
| !! | TCAAAAAAACACATTTCTAG+GGG | - | chr1.3:26741934-26741953 | MS.gene073894:intron | 25.0% |
| !! | TCTAGAATTAGGATTATATG+TGG | - | chr1.3:26741665-26741684 | MS.gene073894:intron | 25.0% |
| !!! | ATAATTAGTGCTTTCTAGTT+GGG | + | chr1.3:26742381-26742400 | None:intergenic | 25.0% |
| !!! | GCATAGCTTTTTTTTTTTTG+AGG | - | chr1.3:26741592-26741611 | MS.gene073894:intron | 25.0% |
| !!! | TTTTTTCTCTCAAGGTTATA+AGG | - | chr1.3:26741858-26741877 | MS.gene073894:intron | 25.0% |
| AAGAATGTTAATGAAGGGAA+AGG | - | chr1.3:26741426-26741445 | MS.gene073894:intron | 30.0% | |
| ACTGAATTCTGCAAATCAAT+AGG | - | chr1.3:26742671-26742690 | MS.gene073894:CDS | 30.0% | |
| GATTTGAACTTCATCTCTTA+AGG | + | chr1.3:26742507-26742526 | None:intergenic | 30.0% | |
| GTTTAAAGATTGATGGAAGA+TGG | - | chr1.3:26742140-26742159 | MS.gene073894:intron | 30.0% | |
| TGTGGTTGTTTAAAGATTGA+TGG | - | chr1.3:26742133-26742152 | MS.gene073894:intron | 30.0% | |
| TTGATATTTGCGGAGAATTA+TGG | - | chr1.3:26742043-26742062 | MS.gene073894:intron | 30.0% | |
| ! | GATAATTAGTGCTTTCTAGT+TGG | + | chr1.3:26742382-26742401 | None:intergenic | 30.0% |
| !! | TAATTAGTGCTTTCTAGTTG+GGG | + | chr1.3:26742380-26742399 | None:intergenic | 30.0% |
| !! | TATTTTTGCTCCAATTGTTG+TGG | - | chr1.3:26741449-26741468 | MS.gene073894:intron | 30.0% |
| !! | TCAATGGTTTGTTAGATTGA+AGG | - | chr1.3:26741698-26741717 | MS.gene073894:intron | 30.0% |
| !!! | TTTGAGATGGTTTTGAATCA+AGG | - | chr1.3:26741987-26742006 | MS.gene073894:intron | 30.0% |
| AAACGTTTCAATCAGCTTAG+AGG | - | chr1.3:26741495-26741514 | MS.gene073894:intron | 35.0% | |
| AGTTGGGGAAATACTTGATT+GGG | + | chr1.3:26742365-26742384 | None:intergenic | 35.0% | |
| ATGTTCGGTAATTATCCACA+AGG | - | chr1.3:26742448-26742467 | MS.gene073894:intron | 35.0% | |
| GTGGTTACTCGTAATATTGT+TGG | - | chr1.3:26741468-26741487 | MS.gene073894:intron | 35.0% | |
| TAGTTGGGGAAATACTTGAT+TGG | + | chr1.3:26742366-26742385 | None:intergenic | 35.0% | |
| TCGGGATGTTTCAAAATGTT+CGG | - | chr1.3:26742433-26742452 | MS.gene073894:intron | 35.0% | |
| TCTATGAGATGTCATCTCAA+TGG | + | chr1.3:26741895-26741914 | None:intergenic | 35.0% | |
| TTACGAGTAACCACAACAAT+TGG | + | chr1.3:26741462-26741481 | None:intergenic | 35.0% | |
| TTCATCATTCTATGGAAGCT+GGG | - | chr1.3:26741299-26741318 | MS.gene073894:CDS | 35.0% | |
| TTGAGATGACATCTCATAGA+TGG | - | chr1.3:26741895-26741914 | MS.gene073894:intron | 35.0% | |
| !! | ATTAGGTTGGCTAAGAAGAA+TGG | - | chr1.3:26742722-26742741 | MS.gene073894:CDS | 35.0% |
| !! | TGTGTTGGTTCATCATTCTA+TGG | - | chr1.3:26741291-26741310 | MS.gene073894:CDS | 35.0% |
| AAGAAGAATGGAGAATGGCT+TGG | - | chr1.3:26742734-26742753 | MS.gene073894:CDS | 40.0% | |
| ACCACATACAAGAGACATCA+AGG | + | chr1.3:26742119-26742138 | None:intergenic | 40.0% | |
| ACCTTGATGTCTCTTGTATG+TGG | - | chr1.3:26742115-26742134 | MS.gene073894:intron | 40.0% | |
| AGATGACATCTCATAGATGG+AGG | - | chr1.3:26741898-26741917 | MS.gene073894:intron | 40.0% | |
| AGTTCAAATCACCTCAGAGA+TGG | - | chr1.3:26742517-26742536 | MS.gene073894:CDS | 40.0% | |
| CAAGGACGTGGTAATATTCA+TGG | - | chr1.3:26742005-26742024 | MS.gene073894:intron | 40.0% | |
| CAGATGCAAAACAGAGACAA+GGG | - | chr1.3:26742696-26742715 | MS.gene073894:CDS | 40.0% | |
| CTAGAAGAGAAAGTCTTGCT+TGG | - | chr1.3:26742204-26742223 | MS.gene073894:intron | 40.0% | |
| CTGCAATTATTGTCGTGTTG+CGG | - | chr1.3:26742076-26742095 | MS.gene073894:intron | 40.0% | |
| GCAAGACTTTCTCTTCTAGT+TGG | + | chr1.3:26742203-26742222 | None:intergenic | 40.0% | |
| GTTCATCATTCTATGGAAGC+TGG | - | chr1.3:26741298-26741317 | MS.gene073894:CDS | 40.0% | |
| GTTTCTTCGCAAGTTCGTAT+TGG | - | chr1.3:26741366-26741385 | MS.gene073894:intron | 40.0% | |
| TCATCATTCTATGGAAGCTG+GGG | - | chr1.3:26741300-26741319 | MS.gene073894:CDS | 40.0% | |
| TGGCTAAGAAGAATGGAGAA+TGG | - | chr1.3:26742729-26742748 | MS.gene073894:CDS | 40.0% | |
| TGGTGAAGATTACAGCATGT+TGG | - | chr1.3:26741335-26741354 | MS.gene073894:CDS | 40.0% | |
| TTTGTGTGTGAATGCCTAAG+TGG | + | chr1.3:26742249-26742268 | None:intergenic | 40.0% | |
| !! | ACTTTTTGAGCACACCACTT+AGG | - | chr1.3:26742232-26742251 | MS.gene073894:intron | 40.0% |
| !!! | ATGGTTTTGAATCAAGGACG+TGG | - | chr1.3:26741993-26742012 | MS.gene073894:intron | 40.0% |
| AACAGAGACAAGGGCTGATT+AGG | - | chr1.3:26742705-26742724 | MS.gene073894:CDS | 45.0% | |
| ACCTGTTGCAGAGATTGAAG+TGG | + | chr1.3:26741271-26741290 | None:intergenic | 45.0% | |
| AGCCATTGCTTTACACTCTC+AGG | - | chr1.3:26741521-26741540 | MS.gene073894:intron | 45.0% | |
| AGCTGGGGAACATCTATAGT+TGG | - | chr1.3:26741315-26741334 | MS.gene073894:CDS | 45.0% | |
| ATCATAGGTTGCAACCTCAC+TGG | + | chr1.3:26741405-26741424 | None:intergenic | 45.0% | |
| ATCTCTGCAACAGGTTGTGT+TGG | - | chr1.3:26741276-26741295 | MS.gene073894:CDS | 45.0% | |
| GAAGAGTTAGTAAGCCAGTG+AGG | - | chr1.3:26741388-26741407 | MS.gene073894:intron | 45.0% | |
| GACATCTCATAGATGGAGGA+GGG | - | chr1.3:26741902-26741921 | MS.gene073894:intron | 45.0% | |
| GATAAGAGATTGGGGATGTG+TGG | - | chr1.3:26742410-26742429 | MS.gene073894:intron | 45.0% | |
| GCAGATGCAAAACAGAGACA+AGG | - | chr1.3:26742695-26742714 | MS.gene073894:CDS | 45.0% | |
| TGACATCTCATAGATGGAGG+AGG | - | chr1.3:26741901-26741920 | MS.gene073894:intron | 45.0% | |
| ! | CACCTGAGAGTGTAAAGCAA+TGG | + | chr1.3:26741526-26741545 | None:intergenic | 45.0% |
| !! | TTTCTAGGGGTGTTGAGACA+TGG | - | chr1.3:26741947-26741966 | MS.gene073894:intron | 45.0% |
| AGAGATTGGGGATGTGTGGT+CGG | - | chr1.3:26742414-26742433 | MS.gene073894:intron | 50.0% | |
| CCATCATACGACCATCTCTG+AGG | + | chr1.3:26742531-26742550 | None:intergenic | 50.0% | |
| CCTCAGAGATGGTCGTATGA+TGG | - | chr1.3:26742528-26742547 | MS.gene073894:CDS | 50.0% | |
| GAGACAAGGGCTGATTAGGT+TGG | - | chr1.3:26742709-26742728 | MS.gene073894:CDS | 50.0% | |
| GCCACTTCAATCTCTGCAAC+AGG | - | chr1.3:26741267-26741286 | MS.gene073894:CDS | 50.0% | |
| ACCACTGAGCTGACACCTTG+TGG | + | chr1.3:26742466-26742485 | None:intergenic | 55.0% | |
| GAGATTGGGGATGTGTGGTC+GGG | - | chr1.3:26742415-26742434 | MS.gene073894:intron | 55.0% | |
| ! | TCCACAAGGTGTCAGCTCAG+TGG | - | chr1.3:26742462-26742481 | MS.gene073894:intron | 55.0% |
| !! | CTAGGGGTGTTGAGACATGG+AGG | - | chr1.3:26741950-26741969 | MS.gene073894:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 26741264 | 26742769 | 26741264 | ID=MS.gene073894 |
| chr1.3 | mRNA | 26741264 | 26742769 | 26741264 | ID=MS.gene073894.t1;Parent=MS.gene073894 |
| chr1.3 | exon | 26742491 | 26742769 | 26742491 | ID=MS.gene073894.t1.exon1;Parent=MS.gene073894.t1 |
| chr1.3 | CDS | 26742491 | 26742769 | 26742491 | ID=cds.MS.gene073894.t1;Parent=MS.gene073894.t1 |
| chr1.3 | exon | 26741264 | 26741368 | 26741264 | ID=MS.gene073894.t1.exon2;Parent=MS.gene073894.t1 |
| chr1.3 | CDS | 26741264 | 26741368 | 26741264 | ID=cds.MS.gene073894.t1;Parent=MS.gene073894.t1 |
| Gene Sequence |
| Protein sequence |
