Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07979.t1 | XP_013451947.1 | 97 | 361 | 11 | 0 | 1 | 361 | 1 | 361 | 1.20E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07979.t1 | Q9SZ83 | 63.5 | 359 | 131 | 0 | 1 | 359 | 1 | 359 | 1.4e-137 | 490.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07979.t1 | A0A072UJH2 | 97.0 | 361 | 11 | 0 | 1 | 361 | 1 | 361 | 8.7e-202 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene07979 | 0.827367 | 1.63E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene07979 | 0.809351 | 1.97E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene07979 | 0.803381 | 3.58E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene07979 | 0.806911 | 6.53E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene07979 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene07979 | 0.861388 | 1.06E-63 | -1.69E-46 |
| MS.gene049661 | MS.gene07979 | 0.819577 | 1.08E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene07979 | 0.811522 | 6.71E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene07979 | 0.818952 | 1.50E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene07979 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene07979 | 0.820126 | 8.09E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene07979 | 0.808565 | 2.91E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene07979 | 0.832175 | 1.10E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene07979 | 0.834085 | 3.68E-56 | -1.69E-46 |
| MS.gene050783 | MS.gene07979 | 0.811855 | 5.68E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene07979 | 0.837173 | 6.08E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene07979 | 0.815214 | 1.04E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene07979 | 0.812328 | 4.48E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene07979 | 0.822015 | 2.97E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene07979 | 0.853711 | 1.99E-61 | -1.69E-46 |
| MS.gene051692 | MS.gene07979 | 0.833842 | 4.23E-56 | -1.69E-46 |
| MS.gene051877 | MS.gene07979 | 0.805072 | 1.59E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene07979 | 0.824788 | 6.68E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene07979 | 0.814731 | 1.33E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene07979 | 0.812015 | 5.24E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene07979 | 0.823779 | 1.15E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene07979 | 0.825268 | 5.14E-54 | -1.69E-46 |
| MS.gene052326 | MS.gene07979 | 0.821383 | 4.16E-53 | -1.69E-46 |
| MS.gene052414 | MS.gene07979 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene052481 | MS.gene07979 | 0.835536 | 1.58E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene07979 | 0.832857 | 7.44E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene07979 | 0.845521 | 3.86E-59 | -1.69E-46 |
| MS.gene052982 | MS.gene07979 | 0.802136 | 6.47E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene07979 | 0.80982 | 1.57E-50 | -1.69E-46 |
| MS.gene053107 | MS.gene07979 | 0.808635 | 2.81E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene07979 | 0.805729 | 1.16E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene07979 | 0.844786 | 6.09E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene07979 | 0.809865 | 1.53E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene07979 | 0.800163 | 1.64E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene07979 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene07979 | 0.824808 | 6.61E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene07979 | 0.829581 | 4.75E-55 | -1.69E-46 |
| MS.gene054803 | MS.gene07979 | 0.827232 | 1.75E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene07979 | 0.832693 | 8.17E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene07979 | 0.801425 | 9.06E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene07979 | 0.806787 | 6.94E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene07979 | 0.809325 | 2.00E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene07979 | 0.801569 | 8.46E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene07979 | 0.838313 | 3.10E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene07979 | 0.834501 | 2.89E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene07979 | 0.805887 | 1.07E-49 | -1.69E-46 |
| MS.gene05602 | MS.gene07979 | 0.801957 | 7.05E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene07979 | 0.813722 | 2.22E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene07979 | 0.811854 | 5.68E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene07979 | 0.823601 | 1.27E-53 | -1.69E-46 |
| MS.gene056497 | MS.gene07979 | 0.807935 | 3.96E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene07979 | 0.806834 | 6.79E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene07979 | 0.833668 | 4.67E-56 | -1.69E-46 |
| MS.gene056897 | MS.gene07979 | 0.808492 | 3.02E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene07979 | 0.81771 | 2.86E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene07979 | 0.865189 | 7.07E-65 | -1.69E-46 |
| MS.gene057295 | MS.gene07979 | 0.862899 | 3.65E-64 | -1.69E-46 |
| MS.gene057416 | MS.gene07979 | 0.807175 | 5.75E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene07979 | 0.808784 | 2.61E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene07979 | 0.817249 | 3.64E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene07979 | 0.838992 | 2.07E-57 | -1.69E-46 |
| MS.gene058082 | MS.gene07979 | 0.803695 | 3.08E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene07979 | 0.845773 | 3.29E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene07979 | 0.86515 | 7.27E-65 | -1.69E-46 |
| MS.gene058787 | MS.gene07979 | 0.825712 | 4.04E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene07979 | 0.809267 | 2.06E-50 | -1.69E-46 |
| MS.gene058993 | MS.gene07979 | 0.817063 | 4.00E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene07979 | 0.815459 | 9.14E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene07979 | 0.858909 | 5.96E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene07979 | 0.816282 | 5.99E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene07979 | 0.823777 | 1.15E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene07979 | 0.82952 | 4.92E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene07979 | 0.831954 | 1.25E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene07979 | 0.841065 | 5.96E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene07979 | 0.851398 | 9.11E-61 | -1.69E-46 |
| MS.gene060193 | MS.gene07979 | 0.829217 | 5.82E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene07979 | 0.809794 | 1.59E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene07979 | 0.833711 | 4.56E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene07979 | 0.800346 | 1.50E-48 | -1.69E-46 |
| MS.gene060837 | MS.gene07979 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene07979 | 0.816627 | 5.02E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene07979 | 0.872246 | 3.69E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07979.t1 | MTR_6g038640 | 96.953 | 361 | 11 | 0 | 1 | 361 | 1 | 361 | 0.0 | 724 |
| MS.gene07979.t1 | MTR_6g038650 | 93.352 | 361 | 19 | 2 | 1 | 361 | 1 | 356 | 0.0 | 689 |
| MS.gene07979.t1 | MTR_1g097250 | 70.141 | 355 | 106 | 0 | 7 | 361 | 6 | 360 | 0.0 | 531 |
| MS.gene07979.t1 | MTR_6g038390 | 62.011 | 358 | 136 | 0 | 3 | 360 | 5 | 362 | 7.64e-174 | 488 |
| MS.gene07979.t1 | MTR_6g038350 | 63.408 | 358 | 131 | 0 | 3 | 360 | 5 | 362 | 1.37e-168 | 474 |
| MS.gene07979.t1 | MTR_6g038370 | 63.408 | 358 | 131 | 0 | 3 | 360 | 5 | 362 | 1.37e-168 | 474 |
| MS.gene07979.t1 | MTR_6g066230 | 55.096 | 363 | 158 | 2 | 1 | 359 | 1 | 362 | 2.17e-148 | 423 |
| MS.gene07979.t1 | MTR_3g064900 | 53.994 | 363 | 163 | 2 | 1 | 359 | 1 | 363 | 1.33e-139 | 401 |
| MS.gene07979.t1 | MTR_6g038310 | 63.934 | 122 | 43 | 1 | 3 | 123 | 5 | 126 | 5.52e-42 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07979.t1 | AT4G09670 | 63.510 | 359 | 131 | 0 | 1 | 359 | 1 | 359 | 1.11e-179 | 503 |
| MS.gene07979.t1 | AT1G34200 | 57.263 | 358 | 141 | 2 | 1 | 357 | 1 | 347 | 5.36e-149 | 424 |
| MS.gene07979.t1 | AT1G66130 | 43.478 | 368 | 195 | 7 | 1 | 359 | 1 | 364 | 4.05e-97 | 293 |
Find 97 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGAAAACACAACTGATTT+TGG | 0.144870 | 6.3:+32175228 | MS.gene07979:CDS |
| GGAATGTGGGGTGCAGTTTA+TGG | 0.217349 | 6.3:+32171906 | MS.gene07979:CDS |
| CCCTTCATCACCTCCGTTCT+AGG | 0.227507 | 6.3:-32171952 | None:intergenic |
| TTCATAGGAGCCGTAGATTT+TGG | 0.245108 | 6.3:-32171719 | None:intergenic |
| ACGTAAACAGCGTCAACATT+AGG | 0.295512 | 6.3:-32171757 | None:intergenic |
| CTTGTGGCGCTTCTTTATAT+TGG | 0.296195 | 6.3:+32174891 | MS.gene07979:CDS |
| CAGCAGTTATATCCATTGTT+AGG | 0.316283 | 6.3:-32174958 | None:intergenic |
| TTGATGATCTTGTCACTAGA+TGG | 0.323932 | 6.3:+32175071 | MS.gene07979:CDS |
| TCTCCCTCAGGAGGCTCTTA+TGG | 0.328360 | 6.3:+32175129 | MS.gene07979:CDS |
| TGGAGGATGAGGAGAGGTTT+GGG | 0.333190 | 6.3:+32171980 | MS.gene07979:CDS |
| CCAATCCGTTTCGGCATTCT+CGG | 0.336150 | 6.3:+32171565 | MS.gene07979:CDS |
| TTGGAGGATGAGGAGAGGTT+TGG | 0.340484 | 6.3:+32171979 | MS.gene07979:CDS |
| CTCGACGCTCTTGGCTCTCT+TGG | 0.345356 | 6.3:+32174755 | MS.gene07979:CDS |
| TGCCACCAAATGAGAAAATT+CGG | 0.346134 | 6.3:-32175155 | None:intergenic |
| TTGTGGCGCTTCTTTATATT+GGG | 0.348945 | 6.3:+32174892 | MS.gene07979:CDS |
| GAGCCAAGAGCGTCGAGATC+TGG | 0.364195 | 6.3:-32174749 | None:intergenic |
| ACGCGAAACCGGAGAAGAAA+TGG | 0.375990 | 6.3:+32175194 | MS.gene07979:CDS |
| GGCGGTGGCTGCGGCGAAGA+AGG | 0.377347 | 6.3:+32171810 | MS.gene07979:CDS |
| ATTCACACCTGCTTTACATT+TGG | 0.392125 | 6.3:+32174686 | MS.gene07979:CDS |
| CGTGAAGGCTTCGATTGATA+AGG | 0.397262 | 6.3:+32175255 | MS.gene07979:CDS |
| ATGTCGTTCTCGAGAAAATC+AGG | 0.401057 | 6.3:-32174716 | None:intergenic |
| ATAACTGCTGTTGGGACAAA+AGG | 0.403721 | 6.3:+32174971 | MS.gene07979:CDS |
| CGTAAACAGCGTCAACATTA+GGG | 0.406747 | 6.3:-32171756 | None:intergenic |
| GGCGGTGGGAGGGAAGTTGT+TGG | 0.426867 | 6.3:-32171698 | None:intergenic |
| TGATGATCTTGTCACTAGAT+GGG | 0.427776 | 6.3:+32175072 | MS.gene07979:CDS |
| GTGAAGGCTTCGATTGATAA+GGG | 0.430595 | 6.3:+32175256 | MS.gene07979:CDS |
| AAGCCAGATCTCGACGCTCT+TGG | 0.439470 | 6.3:+32174746 | MS.gene07979:CDS |
| GTGTGCGAAGGTGGTTGCTT+TGG | 0.448592 | 6.3:-32171674 | None:intergenic |
| GCGGTGGCTGCGGCGAAGAA+GGG | 0.452911 | 6.3:+32171811 | MS.gene07979:CDS |
| ATAGTCGGCCATTTCTTCTC+CGG | 0.455501 | 6.3:-32175202 | None:intergenic |
| TCCTAGAACGGAGGTGATGA+AGG | 0.459813 | 6.3:+32171951 | MS.gene07979:CDS |
| TGAAGGTGTGTGAGGAATGT+GGG | 0.467660 | 6.3:+32171893 | MS.gene07979:CDS |
| TGTGAAGTGGGCGGTGGCTG+CGG | 0.469619 | 6.3:+32171801 | MS.gene07979:CDS |
| CTTATCAATCGAAGCCTTCA+CGG | 0.476737 | 6.3:-32175254 | None:intergenic |
| GAATGGCGCGTGAGAGTTTG+CGG | 0.478095 | 6.3:-32171603 | None:intergenic |
| GCGGCTGCCGACGGCGGAGA+TGG | 0.479896 | 6.3:-32171644 | None:intergenic |
| GCTCTCTTGGCGACGAAGGA+TGG | 0.484511 | 6.3:+32174768 | MS.gene07979:CDS |
| AGAAATGGCCGACTATTAGT+AGG | 0.490131 | 6.3:+32175209 | MS.gene07979:CDS |
| GAGGTTTGGGAAGGTTAAAT+CGG | 0.493508 | 6.3:+32171993 | MS.gene07979:CDS |
| TGAGAGTTTGCGGGCTATGT+CGG | 0.497589 | 6.3:-32171593 | None:intergenic |
| ATCAGCACCAAATGTAAAGC+AGG | 0.503357 | 6.3:-32174693 | None:intergenic |
| TGTGGGGTGCAGTTTATGGA+TGG | 0.503410 | 6.3:+32171910 | MS.gene07979:CDS |
| CCGAGAATGCCGAAACGGAT+TGG | 0.507642 | 6.3:-32171565 | None:intergenic |
| GATGATCTTGTCACTAGATG+GGG | 0.507725 | 6.3:+32175073 | MS.gene07979:CDS |
| GGAGAGAGTGCGGCTGCCGA+CGG | 0.508254 | 6.3:-32171653 | None:intergenic |
| ACAATGGATATAACTGCTGT+TGG | 0.509647 | 6.3:+32174962 | MS.gene07979:CDS |
| GACGGCGGAGATGGTGGCGG+TGG | 0.510369 | 6.3:-32171635 | None:intergenic |
| CGGTGGCTGCGGCGAAGAAG+GGG | 0.510716 | 6.3:+32171812 | MS.gene07979:CDS |
| AATGCCGAAACGGATTGGTT+CGG | 0.512845 | 6.3:-32171560 | None:intergenic |
| GTTGTTGGAGTGTGCGAAGG+TGG | 0.515969 | 6.3:-32171683 | None:intergenic |
| GTGAAGGTGTGTGAGGAATG+TGG | 0.518546 | 6.3:+32171892 | MS.gene07979:CDS |
| CAATGGATATAACTGCTGTT+GGG | 0.519696 | 6.3:+32174963 | MS.gene07979:CDS |
| CAAACCGAACCAATCCGTTT+CGG | 0.521658 | 6.3:+32171556 | MS.gene07979:CDS |
| CTTGGCTCTCTTGGCGACGA+AGG | 0.521752 | 6.3:+32174764 | MS.gene07979:CDS |
| TCCTTCACACTAACCGCCAC+AGG | 0.522525 | 6.3:-32171856 | None:intergenic |
| TTTCATTCCTGAATCTGTAC+AGG | 0.527130 | 6.3:-32175286 | None:intergenic |
| CACAGCCGAGAATGCCGAAA+CGG | 0.527316 | 6.3:-32171570 | None:intergenic |
| GCTTCTTTATATTGGGAAGA+TGG | 0.528569 | 6.3:+32174899 | MS.gene07979:CDS |
| GCCTGTGGCGGTTAGTGTGA+AGG | 0.531923 | 6.3:+32171855 | MS.gene07979:CDS |
| GCCGACGGCGGAGATGGTGG+CGG | 0.536667 | 6.3:-32171638 | None:intergenic |
| ACTCCAGCTTTATTAAGCAC+TGG | 0.541763 | 6.3:-32174860 | None:intergenic |
| GCTGCCGACGGCGGAGATGG+TGG | 0.542916 | 6.3:-32171641 | None:intergenic |
| ACATGCAACGTCGTCGGTAA+CGG | 0.555872 | 6.3:-32171781 | None:intergenic |
| AATGGCGCGTGAGAGTTTGC+GGG | 0.557508 | 6.3:-32171602 | None:intergenic |
| GGATGAGGAGAGGTTTGGGA+AGG | 0.557687 | 6.3:+32171984 | MS.gene07979:CDS |
| TTTCTTATCTAACCTAACAA+TGG | 0.559985 | 6.3:+32174946 | MS.gene07979:CDS |
| AATAGAAAACGATCTCCCTC+AGG | 0.562369 | 6.3:+32175117 | MS.gene07979:CDS |
| AGATGGTGGCGGTGGAAGAG+AGG | 0.563398 | 6.3:-32171627 | None:intergenic |
| CGACGACGTTGCATGTGAAG+TGG | 0.565201 | 6.3:+32171788 | MS.gene07979:CDS |
| ACCGCCACCATCTCCGCCGT+CGG | 0.570452 | 6.3:+32171637 | MS.gene07979:CDS |
| CCTAGAACGGAGGTGATGAA+GGG | 0.571024 | 6.3:+32171952 | MS.gene07979:CDS |
| GTTGCATGTGAAGTGGGCGG+TGG | 0.573707 | 6.3:+32171795 | MS.gene07979:CDS |
| CCTCCCACCGCCAAAATCTA+CGG | 0.577677 | 6.3:+32171709 | MS.gene07979:CDS |
| GAGCCAGTGCTTAATAAAGC+TGG | 0.580556 | 6.3:+32174857 | MS.gene07979:CDS |
| GGCGGTGGAAGAGAGGAGAA+TGG | 0.589254 | 6.3:-32171620 | None:intergenic |
| ATTGTGTTAGAGCAATTCTG+TGG | 0.595898 | 6.3:+32174792 | MS.gene07979:CDS |
| GAAGTTGTTGGAGTGTGCGA+AGG | 0.598345 | 6.3:-32171686 | None:intergenic |
| GTCGTCAAGAACTTCTTCAT+AGG | 0.601925 | 6.3:-32171734 | None:intergenic |
| GTGGGGTGCAGTTTATGGAT+GGG | 0.617072 | 6.3:+32171911 | MS.gene07979:CDS |
| GACGACGTTGCATGTGAAGT+GGG | 0.624741 | 6.3:+32171789 | MS.gene07979:CDS |
| CACTTCACATGCAACGTCGT+CGG | 0.627560 | 6.3:-32171787 | None:intergenic |
| GGAGTTTGATGAGATTGTGA+AGG | 0.628031 | 6.3:+32171876 | MS.gene07979:CDS |
| GAGAGTGCGGCTGCCGACGG+CGG | 0.628307 | 6.3:-32171650 | None:intergenic |
| GTGGATGCATCATCCTAGAA+CGG | 0.629139 | 6.3:+32171939 | MS.gene07979:CDS |
| TGAGATTGTGAAGGTGTGTG+AGG | 0.632007 | 6.3:+32171885 | MS.gene07979:CDS |
| GCTGGAGTGATTCTATCTTG+TGG | 0.635997 | 6.3:+32174875 | MS.gene07979:CDS |
| GAAGGTGTGTGAGGAATGTG+GGG | 0.637070 | 6.3:+32171894 | MS.gene07979:CDS |
| TTGTGTTAGAGCAATTCTGT+GGG | 0.638125 | 6.3:+32174793 | MS.gene07979:CDS |
| AGAAAACGATCTCCCTCAGG+AGG | 0.651262 | 6.3:+32175120 | MS.gene07979:CDS |
| TTACCATAAGAGCCTCCTGA+GGG | 0.654472 | 6.3:-32175132 | None:intergenic |
| AGTTTATGGATGGGACTATG+TGG | 0.660551 | 6.3:+32171920 | MS.gene07979:CDS |
| GATGCATCATCCTAGAACGG+AGG | 0.667515 | 6.3:+32171942 | MS.gene07979:CDS |
| CTAGAACGGAGGTGATGAAG+GGG | 0.676280 | 6.3:+32171953 | MS.gene07979:CDS |
| TTTGCTTGAGAAGCCTGTGG+CGG | 0.688730 | 6.3:+32171843 | MS.gene07979:CDS |
| TGGTTGCTTTGGAGAGAGTG+CGG | 0.689611 | 6.3:-32171663 | None:intergenic |
| GTTACCATAAGAGCCTCCTG+AGG | 0.717914 | 6.3:-32175133 | None:intergenic |
| GACGTTGCATGTGAAGTGGG+CGG | 0.734438 | 6.3:+32171792 | MS.gene07979:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACTTAATGTTTAAGATT+GGG | - | chr6.3:32174576-32174595 | None:intergenic | 15.0% |
| !!! | AGATTATTTTTTAGAGATTT+AGG | + | chr6.3:32172614-32172633 | MS.gene07979:intron | 15.0% |
| !!! | GATTATTTTTTAGAGATTTA+GGG | + | chr6.3:32172615-32172634 | MS.gene07979:intron | 15.0% |
| !!! | TGATTATCTAAAATTATTAG+CGG | + | chr6.3:32172160-32172179 | MS.gene07979:intron | 15.0% |
| !! | ATAATGTTGATGTATAAACT+AGG | + | chr6.3:32172038-32172057 | MS.gene07979:intron | 20.0% |
| !! | ATTAATGTATGAAGCTAAAA+GGG | + | chr6.3:32172900-32172919 | MS.gene07979:intron | 20.0% |
| !! | CCTCTTTATTAAATTATCAT+CGG | - | chr6.3:32172261-32172280 | None:intergenic | 20.0% |
| !! | TAAGAAAATAGAAGTGATTT+GGG | + | chr6.3:32172845-32172864 | MS.gene07979:intron | 20.0% |
| !! | TGTATAAATAATGAGAATGT+AGG | + | chr6.3:32173090-32173109 | MS.gene07979:intron | 20.0% |
| !! | TTAAGAAAATAGAAGTGATT+TGG | + | chr6.3:32172844-32172863 | MS.gene07979:intron | 20.0% |
| !! | TTGAAATTATAAGAGTTAGA+CGG | + | chr6.3:32173533-32173552 | MS.gene07979:intron | 20.0% |
| !!! | GAAAACTTAATGTTTAAGAT+TGG | - | chr6.3:32174577-32174596 | None:intergenic | 20.0% |
| !!! | GAAACATGATTTTAATGTTA+TGG | + | chr6.3:32172951-32172970 | MS.gene07979:intron | 20.0% |
| !!! | TATGATATTGATGATGATTT+AGG | + | chr6.3:32172530-32172549 | MS.gene07979:intron | 20.0% |
| !!! | TTTTCATTTCGTAAATTTGA+AGG | + | chr6.3:32174018-32174037 | MS.gene07979:intron | 20.0% |
| !!! | TTTTGGTTATCTAAATTCTA+TGG | - | chr6.3:32174058-32174077 | None:intergenic | 20.0% |
| ! | AAAGGGACTAAATTGATTAT+CGG | + | chr6.3:32173974-32173993 | MS.gene07979:intron | 25.0% |
| ! | AAGAAAATAGAAGCGATTTA+GGG | + | chr6.3:32172426-32172445 | MS.gene07979:intron | 25.0% |
| ! | AAGAAAATAGAAGTGATTTG+GGG | + | chr6.3:32172846-32172865 | MS.gene07979:intron | 25.0% |
| ! | AGAAGAGTTAAAAAAAATCC+TGG | + | chr6.3:32174178-32174197 | MS.gene07979:intron | 25.0% |
| ! | AGGTACAAAAAACAATTCAA+AGG | - | chr6.3:32173205-32173224 | None:intergenic | 25.0% |
| ! | ATTATCTATACTCATCCAAT+GGG | + | chr6.3:32173423-32173442 | MS.gene07979:intron | 25.0% |
| ! | CAGTAAATTCTGATGAATTT+GGG | + | chr6.3:32173842-32173861 | MS.gene07979:intron | 25.0% |
| ! | CATTAATGTATGAAGCTAAA+AGG | + | chr6.3:32172899-32172918 | MS.gene07979:intron | 25.0% |
| ! | CCGATGATAATTTAATAAAG+AGG | + | chr6.3:32172258-32172277 | MS.gene07979:intron | 25.0% |
| ! | GAAAGATGATACTTGATATT+TGG | + | chr6.3:32173114-32173133 | MS.gene07979:intron | 25.0% |
| ! | TAAGAAAATAGAAGCGATTT+AGG | + | chr6.3:32172425-32172444 | MS.gene07979:intron | 25.0% |
| ! | TAATACAACCTTCATATACT+TGG | - | chr6.3:32173568-32173587 | None:intergenic | 25.0% |
| ! | TCAGTAAATTCTGATGAATT+TGG | + | chr6.3:32173841-32173860 | MS.gene07979:intron | 25.0% |
| ! | TTATTGGATGAAATTCATGT+GGG | - | chr6.3:32172363-32172382 | None:intergenic | 25.0% |
| ! | TTTATCCAGTTAGATAGAAA+GGG | + | chr6.3:32173957-32173976 | MS.gene07979:intron | 25.0% |
| ! | TTTATTGGATGAAATTCATG+TGG | - | chr6.3:32172364-32172383 | None:intergenic | 25.0% |
| ! | TTTCTTATCTAACCTAACAA+TGG | + | chr6.3:32174946-32174965 | MS.gene07979:CDS | 25.0% |
| !! | ATGATTTAGGATAATAGAAG+TGG | + | chr6.3:32172543-32172562 | MS.gene07979:intron | 25.0% |
| !! | TGTCACGTAATTTTTCATTT+TGG | + | chr6.3:32174205-32174224 | MS.gene07979:intron | 25.0% |
| !! | TTAAGAGTAACTGAACATTT+TGG | - | chr6.3:32174075-32174094 | None:intergenic | 25.0% |
| !! | TTTTATCCAGTTAGATAGAA+AGG | + | chr6.3:32173956-32173975 | MS.gene07979:intron | 25.0% |
| !!! | GAGATTAGATCACTTTTATA+CGG | + | chr6.3:32172985-32173004 | MS.gene07979:intron | 25.0% |
| !!! | TTTCTGTTGGTTCTTAATTT+TGG | - | chr6.3:32174488-32174507 | None:intergenic | 25.0% |
| AAAATTACGTGACATTAACC+AGG | - | chr6.3:32174199-32174218 | None:intergenic | 30.0% | |
| ACGAGTACATTTGATATGTT+GGG | - | chr6.3:32173329-32173348 | None:intergenic | 30.0% | |
| AGGATAATAGAAGTGGTTTA+GGG | + | chr6.3:32172550-32172569 | MS.gene07979:intron | 30.0% | |
| AGTTTCTGTACCACATAAAA+TGG | + | chr6.3:32173392-32173411 | MS.gene07979:intron | 30.0% | |
| ATTCAGTGTAATTATCTGTG+TGG | - | chr6.3:32172136-32172155 | None:intergenic | 30.0% | |
| CACTGATATATGGTTTGATT+TGG | + | chr6.3:32174653-32174672 | MS.gene07979:intron | 30.0% | |
| CATTATCTATACTCATCCAA+TGG | + | chr6.3:32173422-32173441 | MS.gene07979:intron | 30.0% | |
| GATTAACAAAAGGACTACAT+TGG | - | chr6.3:32173615-32173634 | None:intergenic | 30.0% | |
| GTTCAATAATGAGTCTCTAA+GGG | - | chr6.3:32174405-32174424 | None:intergenic | 30.0% | |
| GTTTCTGTACCACATAAAAT+GGG | + | chr6.3:32173393-32173412 | MS.gene07979:intron | 30.0% | |
| GTTTGATACTCAAGAAACAT+AGG | + | chr6.3:32173023-32173042 | MS.gene07979:intron | 30.0% | |
| TAACACAGCATAATAACTGT+TGG | - | chr6.3:32174602-32174621 | None:intergenic | 30.0% | |
| TACGAGTACATTTGATATGT+TGG | - | chr6.3:32173330-32173349 | None:intergenic | 30.0% | |
| TACTGAATTAGCTGAAGAAA+GGG | - | chr6.3:32173827-32173846 | None:intergenic | 30.0% | |
| TAGGATAATAGAAGTGGTTT+AGG | + | chr6.3:32172549-32172568 | MS.gene07979:intron | 30.0% | |
| TATGAAGCTAAAAGGGATTT+AGG | + | chr6.3:32172907-32172926 | MS.gene07979:intron | 30.0% | |
| TCAATACTATAGCTTTCTGT+TGG | - | chr6.3:32174501-32174520 | None:intergenic | 30.0% | |
| TCCAATAAAATAGTGAGTGT+TGG | + | chr6.3:32172375-32172394 | MS.gene07979:intron | 30.0% | |
| TGTTCAATAATGAGTCTCTA+AGG | - | chr6.3:32174406-32174425 | None:intergenic | 30.0% | |
| TTACTGAATTAGCTGAAGAA+AGG | - | chr6.3:32173828-32173847 | None:intergenic | 30.0% | |
| TTCAGTGTAATTATCTGTGT+GGG | - | chr6.3:32172135-32172154 | None:intergenic | 30.0% | |
| TTGGCTTAGTGTATAGATAA+TGG | + | chr6.3:32174131-32174150 | MS.gene07979:intron | 30.0% | |
| ! | ATTATCGGTTATCAACTTCA+TGG | + | chr6.3:32173989-32174008 | MS.gene07979:intron | 30.0% |
| ! | GATGCTTTCTTTTCTTCATA+AGG | - | chr6.3:32175025-32175044 | None:intergenic | 30.0% |
| ! | GATTTAGGGTTCATTTGTTA+TGG | + | chr6.3:32172629-32172648 | MS.gene07979:intron | 30.0% |
| ! | TCCAACACTCACTATTTTAT+TGG | - | chr6.3:32172379-32172398 | None:intergenic | 30.0% |
| ! | TCGCTTCTATTTTCTTAAAG+AGG | - | chr6.3:32172422-32172441 | None:intergenic | 30.0% |
| ! | TGTGTTTTCCTACTAATAGT+CGG | - | chr6.3:32175220-32175239 | None:intergenic | 30.0% |
| ! | TTTTCTATTACGTGCTTACT+CGG | - | chr6.3:32175106-32175125 | None:intergenic | 30.0% |
| !! | TAGGAAAACACAACTGATTT+TGG | + | chr6.3:32175228-32175247 | MS.gene07979:CDS | 30.0% |
| !!! | GAATTGTTTTTTGTACCTAG+CGG | + | chr6.3:32173207-32173226 | MS.gene07979:intron | 30.0% |
| AAAGAAACCCAAAGATGCAA+AGG | - | chr6.3:32173728-32173747 | None:intergenic | 35.0% | |
| AAAGAACTGCAAAAAGGCAA+GGG | - | chr6.3:32173755-32173774 | None:intergenic | 35.0% | |
| AAGTTCACACACACTAATTG+CGG | + | chr6.3:32173264-32173283 | MS.gene07979:intron | 35.0% | |
| ACAATGGATATAACTGCTGT+TGG | + | chr6.3:32174962-32174981 | MS.gene07979:CDS | 35.0% | |
| ATAATGTCATCAAATCCACG+CGG | - | chr6.3:32172314-32172333 | None:intergenic | 35.0% | |
| ATATCAGTGCAGAACATGTA+CGG | - | chr6.3:32174642-32174661 | None:intergenic | 35.0% | |
| ATTCACACCTGCTTTACATT+TGG | + | chr6.3:32174686-32174705 | MS.gene07979:CDS | 35.0% | |
| ATTGACTGAGCTGCAATTAT+AGG | + | chr6.3:32173357-32173376 | MS.gene07979:intron | 35.0% | |
| ATTGTGTTAGAGCAATTCTG+TGG | + | chr6.3:32174792-32174811 | MS.gene07979:CDS | 35.0% | |
| CAAATTCAAAAACGCGAAAC+CGG | + | chr6.3:32175183-32175202 | MS.gene07979:CDS | 35.0% | |
| CAATAGTCGCAAGTTTAAGT+TGG | + | chr6.3:32174112-32174131 | MS.gene07979:intron | 35.0% | |
| CAATGGATATAACTGCTGTT+GGG | + | chr6.3:32174963-32174982 | MS.gene07979:CDS | 35.0% | |
| CAGCAGTTATATCCATTGTT+AGG | - | chr6.3:32174961-32174980 | None:intergenic | 35.0% | |
| CGAGTACATTTGATATGTTG+GGG | - | chr6.3:32173328-32173347 | None:intergenic | 35.0% | |
| GCTTCTTTATATTGGGAAGA+TGG | + | chr6.3:32174899-32174918 | MS.gene07979:CDS | 35.0% | |
| GGTTATCTAAATTCTATGGC+AGG | - | chr6.3:32174054-32174073 | None:intergenic | 35.0% | |
| TACAACCTTCATATACTTGG+CGG | - | chr6.3:32173565-32173584 | None:intergenic | 35.0% | |
| TGATGATCTTGTCACTAGAT+GGG | + | chr6.3:32175072-32175091 | MS.gene07979:CDS | 35.0% | |
| TGCCACCAAATGAGAAAATT+CGG | - | chr6.3:32175158-32175177 | None:intergenic | 35.0% | |
| TTAGTCCCTTTCTATCTAAC+TGG | - | chr6.3:32173965-32173984 | None:intergenic | 35.0% | |
| TTATTCCGCCAAGTATATGA+AGG | + | chr6.3:32173557-32173576 | MS.gene07979:intron | 35.0% | |
| TTCACTCATTTGATAAGCTC+AGG | - | chr6.3:32173498-32173517 | None:intergenic | 35.0% | |
| TTGTGGCGCTTCTTTATATT+GGG | + | chr6.3:32174892-32174911 | MS.gene07979:CDS | 35.0% | |
| TTGTGTTAGAGCAATTCTGT+GGG | + | chr6.3:32174793-32174812 | MS.gene07979:CDS | 35.0% | |
| ! | AACCGAATTTTCTCATTTGG+TGG | + | chr6.3:32175153-32175172 | MS.gene07979:CDS | 35.0% |
| ! | ACATGTTCTGCACTGATATA+TGG | + | chr6.3:32174643-32174662 | MS.gene07979:intron | 35.0% |
| ! | ATAATGAGTCTCTAAGGGAA+AGG | - | chr6.3:32174400-32174419 | None:intergenic | 35.0% |
| ! | CGATACGCTAATACTGTTTT+AGG | - | chr6.3:32174836-32174855 | None:intergenic | 35.0% |
| ! | GAAGTGATTTGGGGTTAAAA+CGG | + | chr6.3:32172855-32172874 | MS.gene07979:intron | 35.0% |
| ! | GGTAACCGAATTTTCTCATT+TGG | + | chr6.3:32175150-32175169 | MS.gene07979:CDS | 35.0% |
| ! | GTAGTCCTTTTGTTAATCAG+CGG | + | chr6.3:32173617-32173636 | MS.gene07979:intron | 35.0% |
| ! | TAGTCCTTTTGTTAATCAGC+GGG | + | chr6.3:32173618-32173637 | MS.gene07979:intron | 35.0% |
| ! | TGGATTTGATGACATTATGC+CGG | + | chr6.3:32172316-32172335 | MS.gene07979:intron | 35.0% |
| ! | TGTATTTGTTGACGATGTCT+TGG | + | chr6.3:32174371-32174390 | MS.gene07979:intron | 35.0% |
| ! | TTGATGATCTTGTCACTAGA+TGG | + | chr6.3:32175071-32175090 | MS.gene07979:CDS | 35.0% |
| ! | TTTTTGCAGTTCTTTGTGCT+GGG | + | chr6.3:32173760-32173779 | MS.gene07979:intron | 35.0% |
| !! | GATTTAGGCTCTGTTTTTCA+CGG | + | chr6.3:32172922-32172941 | MS.gene07979:intron | 35.0% |
| AATAGAAAACGATCTCCCTC+AGG | + | chr6.3:32175117-32175136 | MS.gene07979:CDS | 40.0% | |
| ACGTAAACAGCGTCAACATT+AGG | - | chr6.3:32171760-32171779 | None:intergenic | 40.0% | |
| AGAAATGGCCGACTATTAGT+AGG | + | chr6.3:32175209-32175228 | MS.gene07979:CDS | 40.0% | |
| AGTTTATGGATGGGACTATG+TGG | + | chr6.3:32171920-32171939 | MS.gene07979:CDS | 40.0% | |
| ATAACTGCTGTTGGGACAAA+AGG | + | chr6.3:32174971-32174990 | MS.gene07979:CDS | 40.0% | |
| ATCAGCACCAAATGTAAAGC+AGG | - | chr6.3:32174696-32174715 | None:intergenic | 40.0% | |
| ATGTCGTTCTCGAGAAAATC+AGG | - | chr6.3:32174719-32174738 | None:intergenic | 40.0% | |
| CAAAGAACTGCAAAAAGGCA+AGG | - | chr6.3:32173756-32173775 | None:intergenic | 40.0% | |
| CAGCACAAAGAACTGCAAAA+AGG | - | chr6.3:32173761-32173780 | None:intergenic | 40.0% | |
| CGTAAACAGCGTCAACATTA+GGG | - | chr6.3:32171759-32171778 | None:intergenic | 40.0% | |
| CTATCTGTCAGTATCATGTC+AGG | - | chr6.3:32172802-32172821 | None:intergenic | 40.0% | |
| CTTATCAATCGAAGCCTTCA+CGG | - | chr6.3:32175257-32175276 | None:intergenic | 40.0% | |
| CTTGTGGCGCTTCTTTATAT+TGG | + | chr6.3:32174891-32174910 | MS.gene07979:CDS | 40.0% | |
| GAGGTTTGGGAAGGTTAAAT+CGG | + | chr6.3:32171993-32172012 | MS.gene07979:CDS | 40.0% | |
| GATGATCTTGTCACTAGATG+GGG | + | chr6.3:32175073-32175092 | MS.gene07979:CDS | 40.0% | |
| GCAACGACAGCAAAAACAAT+AGG | - | chr6.3:32173668-32173687 | None:intergenic | 40.0% | |
| GCATAATAGAGATCAGCAGA+AGG | + | chr6.3:32173867-32173886 | MS.gene07979:intron | 40.0% | |
| GGAGTTTGATGAGATTGTGA+AGG | + | chr6.3:32171876-32171895 | MS.gene07979:CDS | 40.0% | |
| GGCGTTTCTTCTGAATCAAA+TGG | + | chr6.3:32174341-32174360 | MS.gene07979:intron | 40.0% | |
| GTCGTCAAGAACTTCTTCAT+AGG | - | chr6.3:32171737-32171756 | None:intergenic | 40.0% | |
| GTGAAGGCTTCGATTGATAA+GGG | + | chr6.3:32175256-32175275 | MS.gene07979:CDS | 40.0% | |
| TTAATGTCTGTACGAGCAAG+AGG | + | chr6.3:32173139-32173158 | MS.gene07979:intron | 40.0% | |
| TTTGATTCAGAAGAAACGCC+AGG | - | chr6.3:32174341-32174360 | None:intergenic | 40.0% | |
| ! | AGTCCTTTTGTTAATCAGCG+GGG | + | chr6.3:32173619-32173638 | MS.gene07979:intron | 40.0% |
| ! | ATGCACAAGCCCATTTTATG+TGG | - | chr6.3:32173405-32173424 | None:intergenic | 40.0% |
| ! | CTTTTTGCAGTTCTTTGTGC+TGG | + | chr6.3:32173759-32173778 | MS.gene07979:intron | 40.0% |
| ! | TTCATAGGAGCCGTAGATTT+TGG | - | chr6.3:32171722-32171741 | None:intergenic | 40.0% |
| ! | TTTTGAGCCTGTACAGATTC+AGG | + | chr6.3:32175279-32175298 | MS.gene07979:CDS | 40.0% |
| !! | ACTCCAGCTTTATTAAGCAC+TGG | - | chr6.3:32174863-32174882 | None:intergenic | 40.0% |
| !! | ATCCAATGGGCTATTGTTTG+GGG | + | chr6.3:32173436-32173455 | MS.gene07979:intron | 40.0% |
| !! | CACACACTTTTTGTACCTAG+CGG | + | chr6.3:32173239-32173258 | MS.gene07979:intron | 40.0% |
| !! | CATCCAATGGGCTATTGTTT+GGG | + | chr6.3:32173435-32173454 | MS.gene07979:intron | 40.0% |
| !! | CTTGTTTTCACCAAGTGTGT+TGG | + | chr6.3:32173702-32173721 | MS.gene07979:intron | 40.0% |
| !! | TCATCCAATGGGCTATTGTT+TGG | + | chr6.3:32173434-32173453 | MS.gene07979:intron | 40.0% |
| AAGCAGAAGCTGTGTTTGTG+TGG | + | chr6.3:32172707-32172726 | MS.gene07979:intron | 45.0% | |
| ACATTTGATATGTTGGGGCG+CGG | - | chr6.3:32173323-32173342 | None:intergenic | 45.0% | |
| ATAGTCGGCCATTTCTTCTC+CGG | - | chr6.3:32175205-32175224 | None:intergenic | 45.0% | |
| CAAACCGAACCAATCCGTTT+CGG | + | chr6.3:32171556-32171575 | MS.gene07979:CDS | 45.0% | |
| CCACATTTCAGAAATGGGTC+CGG | - | chr6.3:32172338-32172357 | None:intergenic | 45.0% | |
| CGTGAAGGCTTCGATTGATA+AGG | + | chr6.3:32175255-32175274 | MS.gene07979:CDS | 45.0% | |
| CTCTTTCTAACAAATCCGCG+TGG | + | chr6.3:32172296-32172315 | MS.gene07979:intron | 45.0% | |
| CTTCGTGTCAGTGTCTACAT+TGG | - | chr6.3:32172227-32172246 | None:intergenic | 45.0% | |
| GAGCCAGTGCTTAATAAAGC+TGG | + | chr6.3:32174857-32174876 | MS.gene07979:CDS | 45.0% | |
| GCTGGAGTGATTCTATCTTG+TGG | + | chr6.3:32174875-32174894 | MS.gene07979:CDS | 45.0% | |
| GCTGTAAGCGTAAACTAGTG+AGG | - | chr6.3:32173165-32173184 | None:intergenic | 45.0% | |
| GGGTCCCACATTTCAGAAAT+GGG | - | chr6.3:32172343-32172362 | None:intergenic | 45.0% | |
| GTGGATGCATCATCCTAGAA+CGG | + | chr6.3:32171939-32171958 | MS.gene07979:CDS | 45.0% | |
| TAGGAAAGACTGACACTCCT+CGG | + | chr6.3:32172057-32172076 | MS.gene07979:intron | 45.0% | |
| TGGGTCCCACATTTCAGAAA+TGG | - | chr6.3:32172344-32172363 | None:intergenic | 45.0% | |
| TGGTGAAAACAAGCACCAGT+AGG | - | chr6.3:32173695-32173714 | None:intergenic | 45.0% | |
| TTACCATAAGAGCCTCCTGA+GGG | - | chr6.3:32175135-32175154 | None:intergenic | 45.0% | |
| ! | AAGCCCCGCTGATTAACAAA+AGG | - | chr6.3:32173625-32173644 | None:intergenic | 45.0% |
| ! | ATAGGAGCCGTAGATTTTGG+CGG | - | chr6.3:32171719-32171738 | None:intergenic | 45.0% |
| ! | GATTAGACGTGTCTTGGTGT+CGG | + | chr6.3:32172079-32172098 | MS.gene07979:intron | 45.0% |
| ! | TGAAGGTGTGTGAGGAATGT+GGG | + | chr6.3:32171893-32171912 | MS.gene07979:CDS | 45.0% |
| ! | TGAGATTGTGAAGGTGTGTG+AGG | + | chr6.3:32171885-32171904 | MS.gene07979:CDS | 45.0% |
| ! | TGTTTTGCTTGAGAAGCCTG+TGG | + | chr6.3:32171840-32171859 | MS.gene07979:CDS | 45.0% |
| !! | AAAAGAAGCATTGCGGGTTG+CGG | + | chr6.3:32173289-32173308 | MS.gene07979:intron | 45.0% |
| !! | AATGCCGAAACGGATTGGTT+CGG | - | chr6.3:32171563-32171582 | None:intergenic | 45.0% |
| !! | ACTGATTTTGGATGCCGTGA+AGG | + | chr6.3:32175240-32175259 | MS.gene07979:CDS | 45.0% |
| !! | CGGACCCATTTCTGAAATGT+GGG | + | chr6.3:32172336-32172355 | MS.gene07979:intron | 45.0% |
| !! | GTGTTGGCCTTTGCATCTTT+GGG | + | chr6.3:32173718-32173737 | MS.gene07979:intron | 45.0% |
| !! | TATTGTTTGGGGGGTTGGTT+AGG | + | chr6.3:32173447-32173466 | MS.gene07979:intron | 45.0% |
| !! | TCCAATGGGCTATTGTTTGG+GGG | + | chr6.3:32173437-32173456 | MS.gene07979:intron | 45.0% |
| !! | TGCGGAGAAAAGAAGCATTG+CGG | + | chr6.3:32173282-32173301 | MS.gene07979:intron | 45.0% |
| !! | TGTGTTGGCCTTTGCATCTT+TGG | + | chr6.3:32173717-32173736 | MS.gene07979:intron | 45.0% |
| ACATGCAACGTCGTCGGTAA+CGG | - | chr6.3:32171784-32171803 | None:intergenic | 50.0% | |
| ACCAAGACACGTCTAATCCG+AGG | - | chr6.3:32172077-32172096 | None:intergenic | 50.0% | |
| ACGCGAAACCGGAGAAGAAA+TGG | + | chr6.3:32175194-32175213 | MS.gene07979:CDS | 50.0% | |
| AGAAAACGATCTCCCTCAGG+AGG | + | chr6.3:32175120-32175139 | MS.gene07979:CDS | 50.0% | |
| AGCTGTGTTTGTGTGGAGGA+TGG | + | chr6.3:32172714-32172733 | MS.gene07979:intron | 50.0% | |
| CACTTCACATGCAACGTCGT+CGG | - | chr6.3:32171790-32171809 | None:intergenic | 50.0% | |
| CAGAAGCTGTGTTTGTGTGG+AGG | + | chr6.3:32172710-32172729 | MS.gene07979:intron | 50.0% | |
| CCAATCCGTTTCGGCATTCT+CGG | + | chr6.3:32171565-32171584 | MS.gene07979:CDS | 50.0% | |
| CCTAGAACGGAGGTGATGAA+GGG | + | chr6.3:32171952-32171971 | MS.gene07979:CDS | 50.0% | |
| CTAGAACGGAGGTGATGAAG+GGG | + | chr6.3:32171953-32171972 | MS.gene07979:CDS | 50.0% | |
| CTGTGTTTGTGTGGAGGATG+GGG | + | chr6.3:32172716-32172735 | MS.gene07979:intron | 50.0% | |
| GAAGTTGTTGGAGTGTGCGA+AGG | - | chr6.3:32171689-32171708 | None:intergenic | 50.0% | |
| GACGACGTTGCATGTGAAGT+GGG | + | chr6.3:32171789-32171808 | MS.gene07979:CDS | 50.0% | |
| GATGCAAAGGCCAACACACT+TGG | - | chr6.3:32173715-32173734 | None:intergenic | 50.0% | |
| GATGCATCATCCTAGAACGG+AGG | + | chr6.3:32171942-32171961 | MS.gene07979:CDS | 50.0% | |
| GCTGTGTTTGTGTGGAGGAT+GGG | + | chr6.3:32172715-32172734 | MS.gene07979:intron | 50.0% | |
| GGAATGTGGGGTGCAGTTTA+TGG | + | chr6.3:32171906-32171925 | MS.gene07979:CDS | 50.0% | |
| GTGGGGTGCAGTTTATGGAT+GGG | + | chr6.3:32171911-32171930 | MS.gene07979:CDS | 50.0% | |
| GTTACCATAAGAGCCTCCTG+AGG | - | chr6.3:32175136-32175155 | None:intergenic | 50.0% | |
| TCCTAGAACGGAGGTGATGA+AGG | + | chr6.3:32171951-32171970 | MS.gene07979:CDS | 50.0% | |
| TGGAGGATGAGGAGAGGTTT+GGG | + | chr6.3:32171980-32171999 | MS.gene07979:CDS | 50.0% | |
| TGTGGGGTGCAGTTTATGGA+TGG | + | chr6.3:32171910-32171929 | MS.gene07979:CDS | 50.0% | |
| TTGGAGGATGAGGAGAGGTT+TGG | + | chr6.3:32171979-32171998 | MS.gene07979:CDS | 50.0% | |
| TTTGCTTGAGAAGCCTGTGG+CGG | + | chr6.3:32171843-32171862 | MS.gene07979:CDS | 50.0% | |
| ! | GAAGGTGTGTGAGGAATGTG+GGG | + | chr6.3:32171894-32171913 | MS.gene07979:CDS | 50.0% |
| ! | GGAGGTGATGAAGGGGTTTT+TGG | + | chr6.3:32171960-32171979 | MS.gene07979:CDS | 50.0% |
| ! | GTGAAGGTGTGTGAGGAATG+TGG | + | chr6.3:32171892-32171911 | MS.gene07979:CDS | 50.0% |
| ! | TCCTCGGATTAGACGTGTCT+TGG | + | chr6.3:32172073-32172092 | MS.gene07979:intron | 50.0% |
| ! | TGAGAGTTTGCGGGCTATGT+CGG | - | chr6.3:32171596-32171615 | None:intergenic | 50.0% |
| !! | AAAGAAGCATTGCGGGTTGC+GGG | + | chr6.3:32173290-32173309 | MS.gene07979:intron | 50.0% |
| !! | CCAATGGGCTATTGTTTGGG+GGG | + | chr6.3:32173438-32173457 | MS.gene07979:intron | 50.0% |
| !! | CCGGACCCATTTCTGAAATG+TGG | + | chr6.3:32172335-32172354 | MS.gene07979:intron | 50.0% |
| !! | GAAGGGGTTTTTGGAGGATG+AGG | + | chr6.3:32171969-32171988 | MS.gene07979:CDS | 50.0% |
| !! | GCGGAGAAAAGAAGCATTGC+GGG | + | chr6.3:32173283-32173302 | MS.gene07979:intron | 50.0% |
| !! | GGTGATGAAGGGGTTTTTGG+AGG | + | chr6.3:32171963-32171982 | MS.gene07979:CDS | 50.0% |
| !! | GGTTTTTGGAGGATGAGGAG+AGG | + | chr6.3:32171974-32171993 | MS.gene07979:CDS | 50.0% |
| !! | TGGTTGCTTTGGAGAGAGTG+CGG | - | chr6.3:32171666-32171685 | None:intergenic | 50.0% |
| AAGCCAGATCTCGACGCTCT+TGG | + | chr6.3:32174746-32174765 | MS.gene07979:CDS | 55.0% | |
| AATGGCGCGTGAGAGTTTGC+GGG | - | chr6.3:32171605-32171624 | None:intergenic | 55.0% | |
| CACAGCCGAGAATGCCGAAA+CGG | - | chr6.3:32171573-32171592 | None:intergenic | 55.0% | |
| CCCCCCAAACAATAGCCCAT+TGG | - | chr6.3:32173441-32173460 | None:intergenic | 55.0% | |
| CCCTTCATCACCTCCGTTCT+AGG | - | chr6.3:32171955-32171974 | None:intergenic | 55.0% | |
| CCGAGAATGCCGAAACGGAT+TGG | - | chr6.3:32171568-32171587 | None:intergenic | 55.0% | |
| CCTCCCACCGCCAAAATCTA+CGG | + | chr6.3:32171709-32171728 | MS.gene07979:CDS | 55.0% | |
| CGACGACGTTGCATGTGAAG+TGG | + | chr6.3:32171788-32171807 | MS.gene07979:CDS | 55.0% | |
| GAATGGCGCGTGAGAGTTTG+CGG | - | chr6.3:32171606-32171625 | None:intergenic | 55.0% | |
| GACGTTGCATGTGAAGTGGG+CGG | + | chr6.3:32171792-32171811 | MS.gene07979:CDS | 55.0% | |
| GGATGAGGAGAGGTTTGGGA+AGG | + | chr6.3:32171984-32172003 | MS.gene07979:CDS | 55.0% | |
| GTGTGCGAAGGTGGTTGCTT+TGG | - | chr6.3:32171677-32171696 | None:intergenic | 55.0% | |
| GTTGTTGGAGTGTGCGAAGG+TGG | - | chr6.3:32171686-32171705 | None:intergenic | 55.0% | |
| TCCTTCACACTAACCGCCAC+AGG | - | chr6.3:32171859-32171878 | None:intergenic | 55.0% | |
| TCTCCCTCAGGAGGCTCTTA+TGG | + | chr6.3:32175129-32175148 | MS.gene07979:CDS | 55.0% | |
| TGGAGGATGGGGAGAGGTTT+GGG | + | chr6.3:32172727-32172746 | MS.gene07979:intron | 55.0% | |
| TGGGCTATTGTTTGGGGGGT+TGG | + | chr6.3:32173442-32173461 | MS.gene07979:intron | 55.0% | |
| TGTGTGTGAACTTCGCCGCT+AGG | - | chr6.3:32173225-32173244 | None:intergenic | 55.0% | |
| TTGAAACCCTGCTGCATGCC+TGG | + | chr6.3:32174320-32174339 | MS.gene07979:intron | 55.0% | |
| TTTGTGTGGAGGATGGGGAG+AGG | + | chr6.3:32172721-32172740 | MS.gene07979:intron | 55.0% | |
| ! | GCTGTCGTTGCTTTGCCTAC+TGG | + | chr6.3:32173677-32173696 | MS.gene07979:intron | 55.0% |
| ! | TATCTGTGTGGGTGTCGTGC+TGG | - | chr6.3:32172124-32172143 | None:intergenic | 55.0% |
| !! | CGTAGATTTTGGCGGTGGGA+GGG | - | chr6.3:32171711-32171730 | None:intergenic | 55.0% |
| !! | GAGCCGTAGATTTTGGCGGT+GGG | - | chr6.3:32171715-32171734 | None:intergenic | 55.0% |
| AGAAACGCCAGGCATGCAGC+AGG | - | chr6.3:32174330-32174349 | None:intergenic | 60.0% | |
| GAAACGCCAGGCATGCAGCA+GGG | - | chr6.3:32174329-32174348 | None:intergenic | 60.0% | |
| GCCTGTGGCGGTTAGTGTGA+AGG | + | chr6.3:32171855-32171874 | MS.gene07979:CDS | 60.0% | |
| GCTCTCTTGGCGACGAAGGA+TGG | + | chr6.3:32174768-32174787 | MS.gene07979:CDS | 60.0% | |
| GGCGGTGGAAGAGAGGAGAA+TGG | - | chr6.3:32171623-32171642 | None:intergenic | 60.0% | |
| GTGGAGGATGGGGAGAGGTT+TGG | + | chr6.3:32172726-32172745 | MS.gene07979:intron | 60.0% | |
| GTTGCATGTGAAGTGGGCGG+TGG | + | chr6.3:32171795-32171814 | MS.gene07979:CDS | 60.0% | |
| ! | CTCGACGCTCTTGGCTCTCT+TGG | + | chr6.3:32174755-32174774 | MS.gene07979:CDS | 60.0% |
| ! | CTTGGCTCTCTTGGCGACGA+AGG | + | chr6.3:32174764-32174783 | MS.gene07979:CDS | 60.0% |
| ! | TGTGGGTGTCGTGCTGGTGT+CGG | - | chr6.3:32172118-32172137 | None:intergenic | 60.0% |
| !! | AGATGGTGGCGGTGGAAGAG+AGG | - | chr6.3:32171630-32171649 | None:intergenic | 60.0% |
| !! | CCGTAGATTTTGGCGGTGGG+AGG | - | chr6.3:32171712-32171731 | None:intergenic | 60.0% |
| !! | GAGCCAAGAGCGTCGAGATC+TGG | - | chr6.3:32174752-32174771 | None:intergenic | 60.0% |
| !! | GGAGCCGTAGATTTTGGCGG+TGG | - | chr6.3:32171716-32171735 | None:intergenic | 60.0% |
| GGATGGGGAGAGGTTTGGGC+AGG | + | chr6.3:32172731-32172750 | MS.gene07979:intron | 65.0% | |
| GGCGGTGGGAGGGAAGTTGT+TGG | - | chr6.3:32171701-32171720 | None:intergenic | 65.0% | |
| TGTGAAGTGGGCGGTGGCTG+CGG | + | chr6.3:32171801-32171820 | MS.gene07979:CDS | 65.0% | |
| ACCGCCACCATCTCCGCCGT+CGG | + | chr6.3:32171637-32171656 | MS.gene07979:CDS | 70.0% | |
| CGGTGGCTGCGGCGAAGAAG+GGG | + | chr6.3:32171812-32171831 | MS.gene07979:CDS | 70.0% | |
| GCGGTGGCTGCGGCGAAGAA+GGG | + | chr6.3:32171811-32171830 | MS.gene07979:CDS | 70.0% | |
| ! | GGAGAGAGTGCGGCTGCCGA+CGG | - | chr6.3:32171656-32171675 | None:intergenic | 70.0% |
| GCTGCCGACGGCGGAGATGG+TGG | - | chr6.3:32171644-32171663 | None:intergenic | 75.0% | |
| GGCGGTGGCTGCGGCGAAGA+AGG | + | chr6.3:32171810-32171829 | MS.gene07979:CDS | 75.0% | |
| ! | GAGAGTGCGGCTGCCGACGG+CGG | - | chr6.3:32171653-32171672 | None:intergenic | 75.0% |
| ! | GCCGACGGCGGAGATGGTGG+CGG | - | chr6.3:32171641-32171660 | None:intergenic | 75.0% |
| !! | GACGGCGGAGATGGTGGCGG+TGG | - | chr6.3:32171638-32171657 | None:intergenic | 75.0% |
| ! | GCGGCTGCCGACGGCGGAGA+TGG | - | chr6.3:32171647-32171666 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 32171550 | 32175306 | 32171550 | ID=MS.gene07979 |
| chr6.3 | mRNA | 32171550 | 32175306 | 32171550 | ID=MS.gene07979.t1;Parent=MS.gene07979 |
| chr6.3 | exon | 32171550 | 32172014 | 32171550 | ID=MS.gene07979.t1.exon1;Parent=MS.gene07979.t1 |
| chr6.3 | CDS | 32171550 | 32172014 | 32171550 | ID=cds.MS.gene07979.t1;Parent=MS.gene07979.t1 |
| chr6.3 | exon | 32174686 | 32175306 | 32174686 | ID=MS.gene07979.t1.exon2;Parent=MS.gene07979.t1 |
| chr6.3 | CDS | 32174686 | 32175306 | 32174686 | ID=cds.MS.gene07979.t1;Parent=MS.gene07979.t1 |
| Gene Sequence |
| Protein sequence |
