Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22144.t1 | XP_003599832.1 | 91.8 | 170 | 14 | 0 | 265 | 434 | 11 | 180 | 1.70E-77 | 300.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22144.t1 | G7IXV5 | 91.8 | 170 | 14 | 0 | 265 | 434 | 11 | 180 | 1.2e-77 | 300.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene22144 | 0.810009 | 1.43E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene22144 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene22144 | 0.843581 | 1.28E-58 | -1.69E-46 |
| MS.gene049404 | MS.gene22144 | 0.82877 | 7.47E-55 | -1.69E-46 |
| MS.gene049435 | MS.gene22144 | 0.810049 | 1.40E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene22144 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene22144 | 0.820295 | 7.40E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene22144 | 0.814525 | 1.47E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene22144 | 0.81727 | 3.60E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene22144 | 0.821319 | 4.30E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene22144 | 0.810427 | 1.16E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene22144 | 0.820475 | 6.73E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene22144 | 0.817935 | 2.55E-52 | -1.69E-46 |
| MS.gene051181 | MS.gene22144 | 0.804542 | 2.05E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene22144 | 0.82473 | 6.89E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene22144 | 0.832608 | 8.58E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene22144 | 0.834495 | 2.90E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene22144 | 0.837543 | 4.89E-57 | -1.69E-46 |
| MS.gene052239 | MS.gene22144 | -0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene052488 | MS.gene22144 | 0.80003 | 1.74E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene22144 | 0.819055 | 1.42E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene22144 | 0.829376 | 5.33E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene22144 | 0.833035 | 6.72E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene22144 | 0.83203 | 1.19E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene22144 | 0.801619 | 8.27E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene22144 | 0.814364 | 1.60E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene22144 | 0.804108 | 2.53E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene22144 | 0.828401 | 9.17E-55 | -1.69E-46 |
| MS.gene053883 | MS.gene22144 | 0.825835 | 3.77E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene22144 | 0.838616 | 2.59E-57 | -1.69E-46 |
| MS.gene054405 | MS.gene22144 | 0.809176 | 2.15E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene22144 | 0.801172 | 1.02E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene22144 | 0.853495 | 2.30E-61 | -1.69E-46 |
| MS.gene054775 | MS.gene22144 | 0.806302 | 8.79E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene22144 | 0.815446 | 9.21E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene22144 | 0.815373 | 9.56E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene22144 | 0.801285 | 9.68E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene22144 | 0.807869 | 4.09E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene22144 | 0.830668 | 2.58E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene22144 | 0.807235 | 5.58E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene22144 | 0.807298 | 5.41E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene22144 | 0.841172 | 5.58E-58 | -1.69E-46 |
| MS.gene05604 | MS.gene22144 | 0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene22144 | 0.822934 | 1.82E-53 | -1.69E-46 |
| MS.gene056162 | MS.gene22144 | 0.807375 | 5.21E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene22144 | 0.801451 | 8.95E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene22144 | 0.847697 | 9.81E-60 | -1.69E-46 |
| MS.gene056252 | MS.gene22144 | 0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene22144 | 0.841469 | 4.66E-58 | -1.69E-46 |
| MS.gene056595 | MS.gene22144 | 0.828357 | 9.41E-55 | -1.69E-46 |
| MS.gene056776 | MS.gene22144 | 0.808581 | 2.89E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene22144 | 0.802382 | 5.76E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene22144 | 0.814186 | 1.75E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene22144 | 0.800988 | 1.11E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene22144 | 0.808807 | 2.58E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene22144 | 0.827704 | 1.35E-54 | -1.69E-46 |
| MS.gene057414 | MS.gene22144 | 0.825869 | 3.70E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene22144 | 0.864617 | 1.07E-64 | -1.69E-46 |
| MS.gene057869 | MS.gene22144 | 0.807615 | 4.64E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene22144 | 0.810752 | 9.86E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene22144 | 0.850493 | 1.64E-60 | -1.69E-46 |
| MS.gene058037 | MS.gene22144 | 0.811788 | 5.88E-51 | -1.69E-46 |
| MS.gene058294 | MS.gene22144 | 0.800917 | 1.15E-48 | -1.69E-46 |
| MS.gene05847 | MS.gene22144 | 0.802169 | 6.37E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene22144 | 0.804348 | 2.26E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene22144 | 0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene22144 | 0.809761 | 1.61E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene22144 | 0.815973 | 7.02E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene22144 | 0.831635 | 1.49E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene22144 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene059584 | MS.gene22144 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene22144 | 0.816499 | 5.36E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene22144 | 0.81478 | 1.29E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene22144 | 0.813663 | 2.28E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene22144 | 0.804562 | 2.04E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene22144 | 0.820148 | 7.99E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene22144 | 0.80629 | 8.84E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene22144 | 0.811762 | 5.95E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene22144 | 0.830262 | 3.24E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene22144 | 0.81283 | 3.48E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene22144 | 0.819803 | 9.58E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22144.t1 | MTR_3g047590 | 91.765 | 170 | 14 | 0 | 265 | 434 | 11 | 180 | 3.67e-109 | 319 |
| MS.gene22144.t1 | MTR_2g437280 | 40.244 | 82 | 49 | 0 | 89 | 170 | 21 | 102 | 3.57e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22144.t1 | AT1G06500 | 40.789 | 152 | 68 | 4 | 281 | 432 | 2 | 131 | 5.94e-28 | 108 |
| MS.gene22144.t1 | AT1G06500 | 40.789 | 152 | 68 | 4 | 281 | 432 | 2 | 131 | 5.94e-28 | 108 |
| MS.gene22144.t1 | AT1G06500 | 40.789 | 152 | 68 | 4 | 281 | 432 | 2 | 131 | 5.94e-28 | 108 |
| MS.gene22144.t1 | AT1G06500 | 40.789 | 152 | 68 | 4 | 281 | 432 | 2 | 131 | 5.94e-28 | 108 |
Find 102 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAATTCCACTGTGTTAT+TGG | 0.168802 | 3.4:-42527817 | None:intergenic |
| ATATTGCTCCATCAAATATT+TGG | 0.194483 | 3.4:+42528754 | MS.gene22144:CDS |
| ACATTGGATGAATTTAAATA+TGG | 0.196305 | 3.4:+42528439 | MS.gene22144:CDS |
| CATGCATCCATCCATGATTT+TGG | 0.208551 | 3.4:-42528787 | None:intergenic |
| TTCCTTGTTGATGTGAATTC+TGG | 0.218734 | 3.4:-42528351 | None:intergenic |
| GCCTCTCCTCCACTTTCTTC+TGG | 0.244916 | 3.4:-42528562 | None:intergenic |
| ATATATGGTCGGTTGGGTTT+TGG | 0.246204 | 3.4:+42527693 | MS.gene22144:CDS |
| GGAAGAGAAACATTTAAATT+AGG | 0.257008 | 3.4:+42528685 | MS.gene22144:CDS |
| GATGCCTTGTGCGAGAAATA+TGG | 0.274158 | 3.4:+42526992 | MS.gene22144:CDS |
| TTCTCAGGTGCATCGTTTAC+AGG | 0.296795 | 3.4:+42527108 | MS.gene22144:CDS |
| TATCGACTACTTCAAATAAA+TGG | 0.302615 | 3.4:+42528479 | MS.gene22144:CDS |
| ACACCGTGTTCGGAAAATTC+TGG | 0.307317 | 3.4:-42528399 | None:intergenic |
| ATCCAATGTTGTCATTCCTT+TGG | 0.364028 | 3.4:-42528425 | None:intergenic |
| CATTGGATGAATTTAAATAT+GGG | 0.366867 | 3.4:+42528440 | MS.gene22144:CDS |
| TGAAGTAGTCGATAAGCTTT+CGG | 0.377284 | 3.4:-42528470 | None:intergenic |
| GATCGCTCGTGCAGTTTGTC+AGG | 0.395520 | 3.4:+42526855 | MS.gene22144:CDS |
| AAGGGATAAAAGACCGTTTA+CGG | 0.400335 | 3.4:+42527170 | MS.gene22144:CDS |
| GATCTTCATTGCCAAAATCA+TGG | 0.401657 | 3.4:+42528776 | MS.gene22144:CDS |
| CCTTTGGCTAACACCGTGTT+CGG | 0.405151 | 3.4:-42528409 | None:intergenic |
| TGGAGGAGAGGCAGAGAAGA+AGG | 0.410731 | 3.4:+42528573 | MS.gene22144:CDS |
| TGCGCATCCGACAGCTTCTC+AGG | 0.410922 | 3.4:-42527771 | None:intergenic |
| ATGCCTTGTGCGAGAAATAT+GGG | 0.421654 | 3.4:+42526993 | MS.gene22144:CDS |
| GTACGAGTCTTTAGTTTCTC+AGG | 0.423024 | 3.4:+42527093 | MS.gene22144:CDS |
| AGATGCTGTGCCATGAAAAC+TGG | 0.430285 | 3.4:+42527748 | MS.gene22144:CDS |
| CGCAGGAGAAGAAATGGAAC+TGG | 0.438759 | 3.4:+42527263 | MS.gene22144:CDS |
| TGGATACGCAGGAGAAGAAA+TGG | 0.441199 | 3.4:+42527257 | MS.gene22144:CDS |
| CACCGTGTTCGGAAAATTCT+GGG | 0.447219 | 3.4:-42528398 | None:intergenic |
| AACAGCATAACAGTCATATA+TGG | 0.451995 | 3.4:+42527678 | MS.gene22144:intron |
| ATGAAGATCCAAATATTTGA+TGG | 0.453836 | 3.4:-42528762 | None:intergenic |
| TTATCCCTTTCTCGTGTCCA+TGG | 0.454238 | 3.4:-42527156 | None:intergenic |
| GTTGACTCTTGCCTCCGTCT+TGG | 0.455211 | 3.4:-42528540 | None:intergenic |
| GTGTAAACAAGCTAGGCAAA+AGG | 0.464270 | 3.4:+42528725 | MS.gene22144:CDS |
| GTTTGTCAGGACAGAACTAT+AGG | 0.467257 | 3.4:+42526868 | MS.gene22144:CDS |
| AACAGTCATATATGGTCGGT+TGG | 0.473831 | 3.4:+42527686 | MS.gene22144:CDS |
| CTCTCTGTGTTACAACAAGA+TGG | 0.474414 | 3.4:+42527046 | MS.gene22144:CDS |
| TCACAATCAAGTTCCGTAAA+CGG | 0.476630 | 3.4:-42527183 | None:intergenic |
| TTCATCCATGGACACGAGAA+AGG | 0.480661 | 3.4:+42527151 | MS.gene22144:CDS |
| AGGAAAAGAGCTGTAGAAGA+AGG | 0.487958 | 3.4:+42528664 | MS.gene22144:CDS |
| TTACGGAACTTGATTGTGAT+GGG | 0.498055 | 3.4:+42527187 | MS.gene22144:CDS |
| TCTGACATGGGAAAAGTTGA+AGG | 0.498075 | 3.4:+42526970 | MS.gene22144:CDS |
| TTAGGTGTTCTCCGAGGCTA+TGG | 0.498800 | 3.4:+42528703 | MS.gene22144:CDS |
| GACAAAAGCACAAGGTGTTA+CGG | 0.499816 | 3.4:+42528324 | MS.gene22144:CDS |
| GACTACTTCAAATAAATGGT+GGG | 0.503994 | 3.4:+42528483 | MS.gene22144:CDS |
| CATAGCACTAGCAGTGGAGA+TGG | 0.508492 | 3.4:+42527237 | MS.gene22144:CDS |
| GAGAAGAAGGAATGTGAAAC+CGG | 0.508809 | 3.4:+42528586 | MS.gene22144:CDS |
| TTTACGGAACTTGATTGTGA+TGG | 0.509459 | 3.4:+42527186 | MS.gene22144:CDS |
| GGAAATAAAAGCGTTGAAAG+TGG | 0.510593 | 3.4:+42528370 | MS.gene22144:CDS |
| ACAGTCATATATGGTCGGTT+GGG | 0.511607 | 3.4:+42527687 | MS.gene22144:CDS |
| GATGCGTGTGCAAGCTGCGC+AGG | 0.515921 | 3.4:+42526648 | MS.gene22144:CDS |
| ATTATTACTCGAAGCTGTGC+AGG | 0.519575 | 3.4:+42526691 | MS.gene22144:CDS |
| CTTCAAATAAATGGTGGGGA+TGG | 0.520192 | 3.4:+42528488 | MS.gene22144:CDS |
| AACGTTAGACGGCGACGACC+TGG | 0.520612 | 3.4:+42526825 | MS.gene22144:intron |
| ATGGCACAGCATCTCTAGCA+TGG | 0.527660 | 3.4:-42527739 | None:intergenic |
| GCAACAAGCTTAACATGTCC+TGG | 0.527680 | 3.4:-42527287 | None:intergenic |
| CACGAGCGATCAATCTTGCC+AGG | 0.529769 | 3.4:-42526843 | None:intergenic |
| AGAAGAAATGGAACTGGACC+AGG | 0.534568 | 3.4:+42527269 | MS.gene22144:CDS |
| ACCCAAGAAGATGGAGGCTA+AGG | 0.535086 | 3.4:+42526576 | None:intergenic |
| TGTAAACAAGCTAGGCAAAA+GGG | 0.535406 | 3.4:+42528726 | MS.gene22144:CDS |
| TTCATTGCCAAAATCATGGA+TGG | 0.547716 | 3.4:+42528780 | MS.gene22144:CDS |
| TGCGCAGGATCATGAGCGGT+TGG | 0.548184 | 3.4:+42526663 | MS.gene22144:CDS |
| TCATCCATGGACACGAGAAA+GGG | 0.549296 | 3.4:+42527152 | MS.gene22144:CDS |
| GAACTTGATTGTGATGGGTC+TGG | 0.549406 | 3.4:+42527192 | MS.gene22144:CDS |
| TTTCTGGAAGATTTCTAAGG+TGG | 0.549720 | 3.4:+42527405 | MS.gene22144:CDS |
| GATTTCTAAGGTGGATGTGG+TGG | 0.550698 | 3.4:+42527414 | MS.gene22144:CDS |
| CGACTACTTCAAATAAATGG+TGG | 0.553601 | 3.4:+42528482 | MS.gene22144:CDS |
| CCGAACACGGTGTTAGCCAA+AGG | 0.554812 | 3.4:+42528409 | MS.gene22144:CDS |
| TATGTTCAGTACTTCATCCA+TGG | 0.556949 | 3.4:+42527139 | MS.gene22144:CDS |
| ACCAGAAGAAAGTGGAGGAG+AGG | 0.572132 | 3.4:+42528561 | MS.gene22144:CDS |
| GTTTCACACACATACGCTGT+TGG | 0.574077 | 3.4:-42527848 | None:intergenic |
| TCGACTGTGTTTGCTACCAT+CGG | 0.586233 | 3.4:-42527380 | None:intergenic |
| TGGCACAGCATCTCTAGCAT+GGG | 0.586694 | 3.4:-42527738 | None:intergenic |
| GAAGATTTCTAAGGTGGATG+TGG | 0.587273 | 3.4:+42527411 | MS.gene22144:CDS |
| CTTGCACACGCATCTCAGCA+AGG | 0.588107 | 3.4:-42526639 | None:intergenic |
| AGCAAGGGTTTGCTTGAGCG+TGG | 0.588444 | 3.4:-42526623 | None:intergenic |
| AATAACACAGTGGAATTGAT+CGG | 0.588935 | 3.4:+42527819 | MS.gene22144:CDS |
| TTGCACACGCATCTCAGCAA+GGG | 0.591574 | 3.4:-42526638 | None:intergenic |
| AGGACGATCAATATCTGACA+TGG | 0.601903 | 3.4:+42526957 | MS.gene22144:CDS |
| GCTTGTTTACACCATAGCCT+CGG | 0.602789 | 3.4:-42528714 | None:intergenic |
| GGCTATGGTGTAAACAAGCT+AGG | 0.604381 | 3.4:+42528718 | MS.gene22144:CDS |
| AAGAGTCAACCAGAAGAAAG+TGG | 0.608610 | 3.4:+42528553 | MS.gene22144:CDS |
| TCTCTGTGTTACAACAAGAT+GGG | 0.614747 | 3.4:+42527047 | MS.gene22144:CDS |
| TGCCTTGTGCGAGAAATATG+GGG | 0.617144 | 3.4:+42526994 | MS.gene22144:CDS |
| ACTACTTCAAATAAATGGTG+GGG | 0.619643 | 3.4:+42528484 | MS.gene22144:CDS |
| AGCAGTGGAGATGGATACGC+AGG | 0.631881 | 3.4:+42527246 | MS.gene22144:CDS |
| TGCAACAAGCAAATGATGGG+AGG | 0.634860 | 3.4:+42528302 | MS.gene22144:CDS |
| AGCCAAAGGAATGACAACAT+TGG | 0.640708 | 3.4:+42528423 | MS.gene22144:CDS |
| CACCAGAATTCACATCAACA+AGG | 0.644361 | 3.4:+42528349 | MS.gene22144:CDS |
| GCATAACAGTCATATATGGT+CGG | 0.652762 | 3.4:+42527682 | MS.gene22144:intron |
| TGTGATGGGTCTGGTCACAC+AGG | 0.660798 | 3.4:+42527201 | MS.gene22144:CDS |
| GGACGATCAATATCTGACAT+GGG | 0.665239 | 3.4:+42526958 | MS.gene22144:CDS |
| GTAGTCGATAAGCTTTCGGA+CGG | 0.669763 | 3.4:-42528466 | None:intergenic |
| GTTGAACATAGCACTAGCAG+TGG | 0.672584 | 3.4:+42527231 | MS.gene22144:CDS |
| CATCTTTGTTGAGATCTGTG+AGG | 0.675369 | 3.4:+42528644 | MS.gene22144:CDS |
| AAGCTGCGCAGGATCATGAG+CGG | 0.675501 | 3.4:+42526659 | MS.gene22144:CDS |
| AGTCAACCAGAAGAAAGTGG+AGG | 0.675616 | 3.4:+42528556 | MS.gene22144:CDS |
| AGTAGTGAAGAAACTCGTCA+AGG | 0.678227 | 3.4:+42528619 | MS.gene22144:CDS |
| GCCTTGTGCGAGAAATATGG+GGG | 0.682618 | 3.4:+42526995 | MS.gene22144:CDS |
| CGTACTGACACAAACCAAGA+CGG | 0.693330 | 3.4:+42528526 | MS.gene22144:CDS |
| AAACTGGCCTGAGAAGCTGT+CGG | 0.710195 | 3.4:+42527764 | MS.gene22144:CDS |
| GATGGGAGGACAAAAGCACA+AGG | 0.714490 | 3.4:+42528316 | MS.gene22144:CDS |
| TTTAAATTAGGTGTTCTCCG+AGG | 0.721425 | 3.4:+42528697 | MS.gene22144:CDS |
| ACTGACACAAACCAAGACGG+AGG | 0.740979 | 3.4:+42528529 | MS.gene22144:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAATTACAAATTCTATA+TGG | - | chr3.4:42528137-42528156 | None:intergenic | 15.0% |
| !! | ACATTGGATGAATTTAAATA+TGG | + | chr3.4:42528439-42528458 | MS.gene22144:CDS | 20.0% |
| !! | ACGATAAATGTTAATTGATA+TGG | + | chr3.4:42528199-42528218 | MS.gene22144:intron | 20.0% |
| !! | CATTGGATGAATTTAAATAT+GGG | + | chr3.4:42528440-42528459 | MS.gene22144:CDS | 20.0% |
| ! | AAAAAAATCCAATAACACAG+TGG | + | chr3.4:42527809-42527828 | MS.gene22144:CDS | 25.0% |
| ! | AAAAGATGTGGATAGAAAAT+AGG | + | chr3.4:42527954-42527973 | MS.gene22144:intron | 25.0% |
| ! | AAATGGAACATAGAATGTTT+AGG | + | chr3.4:42527984-42528003 | MS.gene22144:intron | 25.0% |
| ! | ATATTGCTCCATCAAATATT+TGG | + | chr3.4:42528754-42528773 | MS.gene22144:CDS | 25.0% |
| ! | ATGAAGATCCAAATATTTGA+TGG | - | chr3.4:42528765-42528784 | None:intergenic | 25.0% |
| ! | ATTCTATATGGTATCATAGT+AGG | - | chr3.4:42528125-42528144 | None:intergenic | 25.0% |
| ! | GGAAGAGAAACATTTAAATT+AGG | + | chr3.4:42528685-42528704 | MS.gene22144:CDS | 25.0% |
| !! | TATCGACTACTTCAAATAAA+TGG | + | chr3.4:42528479-42528498 | MS.gene22144:CDS | 25.0% |
| !!! | ACTGTGTTATTGGATTTTTT+TGG | - | chr3.4:42527810-42527829 | None:intergenic | 25.0% |
| !!! | CTGTGTTATTGGATTTTTTT+GGG | - | chr3.4:42527809-42527828 | None:intergenic | 25.0% |
| AAACAACAAAGTTGTAGCTA+TGG | + | chr3.4:42527339-42527358 | MS.gene22144:intron | 30.0% | |
| AACAGCATAACAGTCATATA+TGG | + | chr3.4:42527678-42527697 | MS.gene22144:intron | 30.0% | |
| AATAACACAGTGGAATTGAT+CGG | + | chr3.4:42527819-42527838 | MS.gene22144:CDS | 30.0% | |
| ACTACTTCAAATAAATGGTG+GGG | + | chr3.4:42528484-42528503 | MS.gene22144:CDS | 30.0% | |
| AGAAAATAGGCTATTGGAAA+TGG | + | chr3.4:42527967-42527986 | MS.gene22144:intron | 30.0% | |
| GACTACTTCAAATAAATGGT+GGG | + | chr3.4:42528483-42528502 | MS.gene22144:CDS | 30.0% | |
| TGAAGTGATCATAAAAGATG+TGG | + | chr3.4:42527942-42527961 | MS.gene22144:intron | 30.0% | |
| TTTCGATAATGTAATCAGTG+AGG | - | chr3.4:42528102-42528121 | None:intergenic | 30.0% | |
| ! | TTCACTACTTTCAACTTTTC+CGG | - | chr3.4:42528608-42528627 | None:intergenic | 30.0% |
| ! | TTTTGCAACAAGCAAATGAT+GGG | + | chr3.4:42528299-42528318 | MS.gene22144:CDS | 30.0% |
| !! | AGTTTTCTGGAAGATTTCTA+AGG | + | chr3.4:42527402-42527421 | MS.gene22144:CDS | 30.0% |
| AAAGCTGTTATGGTGACATT+CGG | + | chr3.4:42528060-42528079 | MS.gene22144:intron | 35.0% | |
| AACTCTGTCATTAGGTAGAT+TGG | + | chr3.4:42527868-42527887 | MS.gene22144:intron | 35.0% | |
| AACTTGTCAGAAAGCTGTTA+TGG | + | chr3.4:42528050-42528069 | MS.gene22144:intron | 35.0% | |
| AAGGGATAAAAGACCGTTTA+CGG | + | chr3.4:42527170-42527189 | MS.gene22144:CDS | 35.0% | |
| AATAGATGAGTTTCGTCAAG+CGG | + | chr3.4:42526772-42526791 | MS.gene22144:intron | 35.0% | |
| ATATTGATCGTCCTCTGATA+AGG | - | chr3.4:42526951-42526970 | None:intergenic | 35.0% | |
| ATCCAATGTTGTCATTCCTT+TGG | - | chr3.4:42528428-42528447 | None:intergenic | 35.0% | |
| ATTGAACTTCCAACGTTAGA+CGG | + | chr3.4:42526814-42526833 | MS.gene22144:intron | 35.0% | |
| CCTGCTGAGAAAATTTAGTT+TGG | - | chr3.4:42527600-42527619 | None:intergenic | 35.0% | |
| CGACTACTTCAAATAAATGG+TGG | + | chr3.4:42528482-42528501 | MS.gene22144:CDS | 35.0% | |
| GATCAATTCCACTGTGTTAT+TGG | - | chr3.4:42527820-42527839 | None:intergenic | 35.0% | |
| GATCTTCATTGCCAAAATCA+TGG | + | chr3.4:42528776-42528795 | MS.gene22144:CDS | 35.0% | |
| GCATAACAGTCATATATGGT+CGG | + | chr3.4:42527682-42527701 | MS.gene22144:intron | 35.0% | |
| GTGGATAGAAAATAGGCTAT+TGG | + | chr3.4:42527961-42527980 | MS.gene22144:intron | 35.0% | |
| GTTAGAGATAGAAGTGAATG+TGG | - | chr3.4:42528175-42528194 | None:intergenic | 35.0% | |
| TATGTTCAGTACTTCATCCA+TGG | + | chr3.4:42527139-42527158 | MS.gene22144:CDS | 35.0% | |
| TCACAATCAAGTTCCGTAAA+CGG | - | chr3.4:42527186-42527205 | None:intergenic | 35.0% | |
| TCTAACGTTGGAAGTTCAAT+TGG | - | chr3.4:42526814-42526833 | None:intergenic | 35.0% | |
| TCTCTGTGTTACAACAAGAT+GGG | + | chr3.4:42527047-42527066 | MS.gene22144:CDS | 35.0% | |
| TGAAGTAGTCGATAAGCTTT+CGG | - | chr3.4:42528473-42528492 | None:intergenic | 35.0% | |
| TGTAAACAAGCTAGGCAAAA+GGG | + | chr3.4:42528726-42528745 | MS.gene22144:CDS | 35.0% | |
| TTACGGAACTTGATTGTGAT+GGG | + | chr3.4:42527187-42527206 | MS.gene22144:CDS | 35.0% | |
| TTCATTGCCAAAATCATGGA+TGG | + | chr3.4:42528780-42528799 | MS.gene22144:CDS | 35.0% | |
| TTCCTTGTTGATGTGAATTC+TGG | - | chr3.4:42528354-42528373 | None:intergenic | 35.0% | |
| TTGTAATCCCATCCATGAAA+AGG | - | chr3.4:42526913-42526932 | None:intergenic | 35.0% | |
| TTTAAATTAGGTGTTCTCCG+AGG | + | chr3.4:42528697-42528716 | MS.gene22144:CDS | 35.0% | |
| TTTACGGAACTTGATTGTGA+TGG | + | chr3.4:42527186-42527205 | MS.gene22144:CDS | 35.0% | |
| ! | ATTGTTTCAGTCTTGTAGGA+AGG | + | chr3.4:42527505-42527524 | MS.gene22144:intron | 35.0% |
| ! | CCAAACTAAATTTTCTCAGC+AGG | + | chr3.4:42527597-42527616 | MS.gene22144:intron | 35.0% |
| ! | GTTTTGCAACAAGCAAATGA+TGG | + | chr3.4:42528298-42528317 | MS.gene22144:CDS | 35.0% |
| ! | TCGAATTGTTTCAGTCTTGT+AGG | + | chr3.4:42527501-42527520 | MS.gene22144:intron | 35.0% |
| ! | TTAGATATTTTCGTCAGCCT+TGG | + | chr3.4:42526735-42526754 | MS.gene22144:intron | 35.0% |
| ! | TTGTTTCAGTCTTGTAGGAA+GGG | + | chr3.4:42527506-42527525 | MS.gene22144:intron | 35.0% |
| ! | TTTCTGGAAGATTTCTAAGG+TGG | + | chr3.4:42527405-42527424 | MS.gene22144:CDS | 35.0% |
| ! | TTTTGTCAGCAGTTAAGTAG+TGG | + | chr3.4:42527918-42527937 | MS.gene22144:intron | 35.0% |
| !! | ACATGTTAAGCTTGTTGCAA+TGG | + | chr3.4:42527292-42527311 | MS.gene22144:intron | 35.0% |
| !! | ATGTGGTGGTTTTTAGGAAT+AGG | + | chr3.4:42527428-42527447 | MS.gene22144:CDS | 35.0% |
| !! | CATGTTAAGCTTGTTGCAAT+GGG | + | chr3.4:42527293-42527312 | MS.gene22144:intron | 35.0% |
| !! | CCATTGTTTCTCTTTTCCAT+CGG | - | chr3.4:42527572-42527591 | None:intergenic | 35.0% |
| !! | GGAAATAAAAGCGTTGAAAG+TGG | + | chr3.4:42528370-42528389 | MS.gene22144:CDS | 35.0% |
| !! | GTAGAAGCGCTGAAATAATA+TGG | + | chr3.4:42528026-42528045 | MS.gene22144:intron | 35.0% |
| !! | GTTTTTCAAAGCCTTATCAG+AGG | + | chr3.4:42526937-42526956 | MS.gene22144:intron | 35.0% |
| !!! | ATTTTTTTGGGTCTCTTGCA+TGG | - | chr3.4:42527797-42527816 | None:intergenic | 35.0% |
| AACAGTCATATATGGTCGGT+TGG | + | chr3.4:42527686-42527705 | MS.gene22144:CDS | 40.0% | |
| AAGAGTCAACCAGAAGAAAG+TGG | + | chr3.4:42528553-42528572 | MS.gene22144:CDS | 40.0% | |
| ACAGTCATATATGGTCGGTT+GGG | + | chr3.4:42527687-42527706 | MS.gene22144:CDS | 40.0% | |
| ACTATAGGTGAAGGTGAGTT+TGG | + | chr3.4:42526883-42526902 | MS.gene22144:intron | 40.0% | |
| AGCCAAAGGAATGACAACAT+TGG | + | chr3.4:42528423-42528442 | MS.gene22144:CDS | 40.0% | |
| AGGAAAAGAGCTGTAGAAGA+AGG | + | chr3.4:42528664-42528683 | MS.gene22144:CDS | 40.0% | |
| AGGACGATCAATATCTGACA+TGG | + | chr3.4:42526957-42526976 | MS.gene22144:CDS | 40.0% | |
| AGTAGTGAAGAAACTCGTCA+AGG | + | chr3.4:42528619-42528638 | MS.gene22144:CDS | 40.0% | |
| ATGCCTTGTGCGAGAAATAT+GGG | + | chr3.4:42526993-42527012 | MS.gene22144:CDS | 40.0% | |
| ATTATTACTCGAAGCTGTGC+AGG | + | chr3.4:42526691-42526710 | MS.gene22144:CDS | 40.0% | |
| CAACAAAGTTGTAGCTATGG+TGG | + | chr3.4:42527342-42527361 | MS.gene22144:intron | 40.0% | |
| CACCAGAATTCACATCAACA+AGG | + | chr3.4:42528349-42528368 | MS.gene22144:CDS | 40.0% | |
| CATCTTTGTTGAGATCTGTG+AGG | + | chr3.4:42528644-42528663 | MS.gene22144:CDS | 40.0% | |
| CCGATGGAAAAGAGAAACAA+TGG | + | chr3.4:42527569-42527588 | MS.gene22144:intron | 40.0% | |
| CTCTCTGTGTTACAACAAGA+TGG | + | chr3.4:42527046-42527065 | MS.gene22144:CDS | 40.0% | |
| CTGTCATTAGGTAGATTGGA+AGG | + | chr3.4:42527872-42527891 | MS.gene22144:intron | 40.0% | |
| GAGAAGAAGGAATGTGAAAC+CGG | + | chr3.4:42528586-42528605 | MS.gene22144:CDS | 40.0% | |
| GCTTGACGAAACTCATCTAT+TGG | - | chr3.4:42526773-42526792 | None:intergenic | 40.0% | |
| GGACGATCAATATCTGACAT+GGG | + | chr3.4:42526958-42526977 | MS.gene22144:CDS | 40.0% | |
| GTGTAAACAAGCTAGGCAAA+AGG | + | chr3.4:42528725-42528744 | MS.gene22144:CDS | 40.0% | |
| GTGTGTGAAACTCTGTCATT+AGG | + | chr3.4:42527860-42527879 | MS.gene22144:intron | 40.0% | |
| GTTTGTCAGGACAGAACTAT+AGG | + | chr3.4:42526868-42526887 | MS.gene22144:CDS | 40.0% | |
| TCTGACATGGGAAAAGTTGA+AGG | + | chr3.4:42526970-42526989 | MS.gene22144:CDS | 40.0% | |
| ! | ATATATGGTCGGTTGGGTTT+TGG | + | chr3.4:42527693-42527712 | MS.gene22144:CDS | 40.0% |
| ! | CATGCATCCATCCATGATTT+TGG | - | chr3.4:42528790-42528809 | None:intergenic | 40.0% |
| ! | CTTCAAATAAATGGTGGGGA+TGG | + | chr3.4:42528488-42528507 | MS.gene22144:CDS | 40.0% |
| ! | GACAAAAGCACAAGGTGTTA+CGG | + | chr3.4:42528324-42528343 | MS.gene22144:CDS | 40.0% |
| ! | GTACGAGTCTTTAGTTTCTC+AGG | + | chr3.4:42527093-42527112 | MS.gene22144:CDS | 40.0% |
| ! | TATATGGTCGGTTGGGTTTT+GGG | + | chr3.4:42527694-42527713 | MS.gene22144:CDS | 40.0% |
| !! | GAAGATTTCTAAGGTGGATG+TGG | + | chr3.4:42527411-42527430 | MS.gene22144:CDS | 40.0% |
| AAGGAGTTGCTTCTGATGAC+AGG | + | chr3.4:42527891-42527910 | MS.gene22144:intron | 45.0% | |
| ACACCGTGTTCGGAAAATTC+TGG | - | chr3.4:42528402-42528421 | None:intergenic | 45.0% | |
| AGAAGAAATGGAACTGGACC+AGG | + | chr3.4:42527269-42527288 | MS.gene22144:CDS | 45.0% | |
| AGATGCTGTGCCATGAAAAC+TGG | + | chr3.4:42527748-42527767 | MS.gene22144:CDS | 45.0% | |
| AGTCAACCAGAAGAAAGTGG+AGG | + | chr3.4:42528556-42528575 | MS.gene22144:CDS | 45.0% | |
| CACCGTGTTCGGAAAATTCT+GGG | - | chr3.4:42528401-42528420 | None:intergenic | 45.0% | |
| CAGGACAGAACTATAGGTGA+AGG | + | chr3.4:42526874-42526893 | MS.gene22144:intron | 45.0% | |
| CTAGCGATGATTCAACTACC+AGG | - | chr3.4:42527532-42527551 | None:intergenic | 45.0% | |
| GAAATTTGCAGTGTAGCCGA+TGG | + | chr3.4:42527364-42527383 | MS.gene22144:intron | 45.0% | |
| GATGCCTTGTGCGAGAAATA+TGG | + | chr3.4:42526992-42527011 | MS.gene22144:CDS | 45.0% | |
| GCAACAAGCTTAACATGTCC+TGG | - | chr3.4:42527290-42527309 | None:intergenic | 45.0% | |
| GCTTGTTTACACCATAGCCT+CGG | - | chr3.4:42528717-42528736 | None:intergenic | 45.0% | |
| GGCTATGGTGTAAACAAGCT+AGG | + | chr3.4:42528718-42528737 | MS.gene22144:CDS | 45.0% | |
| GTAGTCGATAAGCTTTCGGA+CGG | - | chr3.4:42528469-42528488 | None:intergenic | 45.0% | |
| GTTGAACATAGCACTAGCAG+TGG | + | chr3.4:42527231-42527250 | MS.gene22144:CDS | 45.0% | |
| GTTTCACACACATACGCTGT+TGG | - | chr3.4:42527851-42527870 | None:intergenic | 45.0% | |
| TCATCCATGGACACGAGAAA+GGG | + | chr3.4:42527152-42527171 | MS.gene22144:CDS | 45.0% | |
| TGCCTTGTGCGAGAAATATG+GGG | + | chr3.4:42526994-42527013 | MS.gene22144:CDS | 45.0% | |
| TGGATACGCAGGAGAAGAAA+TGG | + | chr3.4:42527257-42527276 | MS.gene22144:CDS | 45.0% | |
| TTATCCCTTTCTCGTGTCCA+TGG | - | chr3.4:42527159-42527178 | None:intergenic | 45.0% | |
| TTCATCCATGGACACGAGAA+AGG | + | chr3.4:42527151-42527170 | MS.gene22144:CDS | 45.0% | |
| TTCTCAGGTGCATCGTTTAC+AGG | + | chr3.4:42527108-42527127 | MS.gene22144:CDS | 45.0% | |
| ! | AGGTGGATGTGGTGGTTTTT+AGG | + | chr3.4:42527422-42527441 | MS.gene22144:CDS | 45.0% |
| ! | CGTACTGACACAAACCAAGA+CGG | + | chr3.4:42528526-42528545 | MS.gene22144:CDS | 45.0% |
| ! | GCAAACACAGTCGAGTTTTC+TGG | + | chr3.4:42527389-42527408 | MS.gene22144:CDS | 45.0% |
| ! | TCGACTGTGTTTGCTACCAT+CGG | - | chr3.4:42527383-42527402 | None:intergenic | 45.0% |
| ! | TGCAACAAGCAAATGATGGG+AGG | + | chr3.4:42528302-42528321 | MS.gene22144:CDS | 45.0% |
| ! | TGCTAAGAGAAGTACACCGA+TGG | + | chr3.4:42527553-42527572 | MS.gene22144:intron | 45.0% |
| ! | TGGCTCACCTTTTCATGGAT+GGG | + | chr3.4:42526903-42526922 | MS.gene22144:intron | 45.0% |
| ! | TTGGCTCACCTTTTCATGGA+TGG | + | chr3.4:42526902-42526921 | MS.gene22144:intron | 45.0% |
| !! | ATTGGTCGTCAAGTTGACCA+AGG | - | chr3.4:42526755-42526774 | None:intergenic | 45.0% |
| !! | GAACTTGATTGTGATGGGTC+TGG | + | chr3.4:42527192-42527211 | MS.gene22144:CDS | 45.0% |
| !! | GAGTTTGGCTCACCTTTTCA+TGG | + | chr3.4:42526898-42526917 | MS.gene22144:intron | 45.0% |
| !! | GATTTCTAAGGTGGATGTGG+TGG | + | chr3.4:42527414-42527433 | MS.gene22144:CDS | 45.0% |
| !! | GTTAAGCTTGTTGCAATGGG+TGG | + | chr3.4:42527296-42527315 | MS.gene22144:intron | 45.0% |
| ACCAGAAGAAAGTGGAGGAG+AGG | + | chr3.4:42528561-42528580 | MS.gene22144:CDS | 50.0% | |
| ACTGACACAAACCAAGACGG+AGG | + | chr3.4:42528529-42528548 | MS.gene22144:CDS | 50.0% | |
| AGAAACTGTAGCGCATGAGC+TGG | + | chr3.4:42527460-42527479 | MS.gene22144:intron | 50.0% | |
| ATGGCACAGCATCTCTAGCA+TGG | - | chr3.4:42527742-42527761 | None:intergenic | 50.0% | |
| CATAGCACTAGCAGTGGAGA+TGG | + | chr3.4:42527237-42527256 | MS.gene22144:CDS | 50.0% | |
| CCTTTGGCTAACACCGTGTT+CGG | - | chr3.4:42528412-42528431 | None:intergenic | 50.0% | |
| CGCAGGAGAAGAAATGGAAC+TGG | + | chr3.4:42527263-42527282 | MS.gene22144:CDS | 50.0% | |
| GAAATATGGGGGACTCAGAG+AGG | + | chr3.4:42527006-42527025 | MS.gene22144:CDS | 50.0% | |
| GCCTTGTGCGAGAAATATGG+GGG | + | chr3.4:42526995-42527014 | MS.gene22144:CDS | 50.0% | |
| GCTGTTGTGCACATCACGTT+AGG | - | chr3.4:42527664-42527683 | None:intergenic | 50.0% | |
| GTTATGGTGACATTCGGCTG+CGG | + | chr3.4:42528066-42528085 | MS.gene22144:intron | 50.0% | |
| TCCCCCATATTTCTCGCACA+AGG | - | chr3.4:42526999-42527018 | None:intergenic | 50.0% | |
| TGGCACAGCATCTCTAGCAT+GGG | - | chr3.4:42527741-42527760 | None:intergenic | 50.0% | |
| TTAGGTGTTCTCCGAGGCTA+TGG | + | chr3.4:42528703-42528722 | MS.gene22144:CDS | 50.0% | |
| TTGCACACGCATCTCAGCAA+GGG | - | chr3.4:42526641-42526660 | None:intergenic | 50.0% | |
| ! | AAACTGGCCTGAGAAGCTGT+CGG | + | chr3.4:42527764-42527783 | MS.gene22144:CDS | 50.0% |
| ! | CGCCCAGAATTTTCCGAACA+CGG | + | chr3.4:42528396-42528415 | MS.gene22144:CDS | 50.0% |
| ! | GATGGGAGGACAAAAGCACA+AGG | + | chr3.4:42528316-42528335 | MS.gene22144:CDS | 50.0% |
| ! | GCTTCTCAGGCCAGTTTTCA+TGG | - | chr3.4:42527761-42527780 | None:intergenic | 50.0% |
| AAGCTGCGCAGGATCATGAG+CGG | + | chr3.4:42526659-42526678 | MS.gene22144:CDS | 55.0% | |
| AGCAGTGGAGATGGATACGC+AGG | + | chr3.4:42527246-42527265 | MS.gene22144:CDS | 55.0% | |
| CACGAGCGATCAATCTTGCC+AGG | - | chr3.4:42526846-42526865 | None:intergenic | 55.0% | |
| CTTGCACACGCATCTCAGCA+AGG | - | chr3.4:42526642-42526661 | None:intergenic | 55.0% | |
| GATCGCTCGTGCAGTTTGTC+AGG | + | chr3.4:42526855-42526874 | MS.gene22144:CDS | 55.0% | |
| GCCTCTCCTCCACTTTCTTC+TGG | - | chr3.4:42528565-42528584 | None:intergenic | 55.0% | |
| TGGAGGAGAGGCAGAGAAGA+AGG | + | chr3.4:42528573-42528592 | MS.gene22144:CDS | 55.0% | |
| ! | AGCAAGGGTTTGCTTGAGCG+TGG | - | chr3.4:42526626-42526645 | None:intergenic | 55.0% |
| ! | CCGAACACGGTGTTAGCCAA+AGG | + | chr3.4:42528409-42528428 | MS.gene22144:CDS | 55.0% |
| ! | GTTGACTCTTGCCTCCGTCT+TGG | - | chr3.4:42528543-42528562 | None:intergenic | 55.0% |
| ! | TCAGTCTTGTAGGAAGGGCC+TGG | + | chr3.4:42527511-42527530 | MS.gene22144:intron | 55.0% |
| !! | TGTGATGGGTCTGGTCACAC+AGG | + | chr3.4:42527201-42527220 | MS.gene22144:CDS | 55.0% |
| !!! | GTTGGGTTTTGGGAGTGGCT+GGG | + | chr3.4:42527704-42527723 | MS.gene22144:CDS | 55.0% |
| AACGTTAGACGGCGACGACC+TGG | + | chr3.4:42526825-42526844 | MS.gene22144:intron | 60.0% | |
| AGGTCGTCGCCGTCTAACGT+TGG | - | chr3.4:42526826-42526845 | None:intergenic | 60.0% | |
| TGCGCAGGATCATGAGCGGT+TGG | + | chr3.4:42526663-42526682 | MS.gene22144:CDS | 60.0% | |
| TGCGCATCCGACAGCTTCTC+AGG | - | chr3.4:42527774-42527793 | None:intergenic | 60.0% | |
| TGGGGGACTCAGAGAGGCTA+AGG | + | chr3.4:42527012-42527031 | MS.gene22144:CDS | 60.0% | |
| !!! | GGTCGGTTGGGTTTTGGGAG+TGG | + | chr3.4:42527699-42527718 | MS.gene22144:CDS | 60.0% |
| !!! | GGTTGGGTTTTGGGAGTGGC+TGG | + | chr3.4:42527703-42527722 | MS.gene22144:CDS | 60.0% |
| !!! | GTTTTGGGAGTGGCTGGGCA+TGG | + | chr3.4:42527709-42527728 | MS.gene22144:CDS | 60.0% |
| GATGCGTGTGCAAGCTGCGC+AGG | + | chr3.4:42526648-42526667 | MS.gene22144:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 42526586 | 42528810 | 42526586 | ID=MS.gene22144 |
| chr3.4 | mRNA | 42526586 | 42528810 | 42526586 | ID=MS.gene22144.t1;Parent=MS.gene22144 |
| chr3.4 | exon | 42526586 | 42526733 | 42526586 | ID=MS.gene22144.t1.exon1;Parent=MS.gene22144.t1 |
| chr3.4 | CDS | 42526586 | 42526733 | 42526586 | ID=cds.MS.gene22144.t1;Parent=MS.gene22144.t1 |
| chr3.4 | exon | 42526833 | 42526889 | 42526833 | ID=MS.gene22144.t1.exon2;Parent=MS.gene22144.t1 |
| chr3.4 | CDS | 42526833 | 42526889 | 42526833 | ID=cds.MS.gene22144.t1;Parent=MS.gene22144.t1 |
| chr3.4 | exon | 42526957 | 42527295 | 42526957 | ID=MS.gene22144.t1.exon3;Parent=MS.gene22144.t1 |
| chr3.4 | CDS | 42526957 | 42527295 | 42526957 | ID=cds.MS.gene22144.t1;Parent=MS.gene22144.t1 |
| chr3.4 | exon | 42527380 | 42527449 | 42527380 | ID=MS.gene22144.t1.exon4;Parent=MS.gene22144.t1 |
| chr3.4 | CDS | 42527380 | 42527449 | 42527380 | ID=cds.MS.gene22144.t1;Parent=MS.gene22144.t1 |
| chr3.4 | exon | 42527683 | 42527859 | 42527683 | ID=MS.gene22144.t1.exon5;Parent=MS.gene22144.t1 |
| chr3.4 | CDS | 42527683 | 42527859 | 42527683 | ID=cds.MS.gene22144.t1;Parent=MS.gene22144.t1 |
| chr3.4 | exon | 42528297 | 42528810 | 42528297 | ID=MS.gene22144.t1.exon6;Parent=MS.gene22144.t1 |
| chr3.4 | CDS | 42528297 | 42528810 | 42528297 | ID=cds.MS.gene22144.t1;Parent=MS.gene22144.t1 |
| Gene Sequence |
| Protein sequence |
