Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22790.t1 | XP_003626195.1 | 98.2 | 606 | 11 | 0 | 1 | 606 | 74 | 679 | 3.70E-171 | 611.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22790.t1 | Q8RWU5 | 32.1 | 134 | 87 | 2 | 2 | 135 | 45 | 174 | 9.1e-09 | 63.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22790.t1 | G7KWK1 | 98.2 | 606 | 11 | 0 | 1 | 606 | 74 | 679 | 2.7e-171 | 611.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene22790 | 0.824316 | 8.62E-54 | -1.69E-46 |
| MS.gene04918 | MS.gene22790 | 0.819976 | 8.75E-53 | -1.69E-46 |
| MS.gene04919 | MS.gene22790 | 0.800428 | 1.45E-48 | -1.69E-46 |
| MS.gene04920 | MS.gene22790 | 0.815075 | 1.11E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene22790 | 0.851725 | 7.36E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene22790 | 0.833878 | 4.14E-56 | -1.69E-46 |
| MS.gene049499 | MS.gene22790 | 0.818308 | 2.10E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene22790 | 0.858809 | 6.38E-63 | -1.69E-46 |
| MS.gene050085 | MS.gene22790 | 0.80446 | 2.14E-49 | -1.69E-46 |
| MS.gene050213 | MS.gene22790 | 0.838549 | 2.69E-57 | -1.69E-46 |
| MS.gene050384 | MS.gene22790 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene050386 | MS.gene22790 | 0.817295 | 3.55E-52 | -1.69E-46 |
| MS.gene050414 | MS.gene22790 | 0.816949 | 4.25E-52 | -1.69E-46 |
| MS.gene050551 | MS.gene22790 | 0.814213 | 1.73E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene22790 | 0.85191 | 6.52E-61 | -1.69E-46 |
| MS.gene050654 | MS.gene22790 | 0.859637 | 3.60E-63 | -1.69E-46 |
| MS.gene050689 | MS.gene22790 | 0.804565 | 2.03E-49 | -1.69E-46 |
| MS.gene050737 | MS.gene22790 | 0.808967 | 2.39E-50 | -1.69E-46 |
| MS.gene050931 | MS.gene22790 | 0.887561 | 1.28E-72 | -1.69E-46 |
| MS.gene050941 | MS.gene22790 | 0.813152 | 2.96E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene22790 | 0.818795 | 1.63E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene22790 | 0.82967 | 4.52E-55 | -1.69E-46 |
| MS.gene051209 | MS.gene22790 | 0.808089 | 3.68E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene22790 | 0.828977 | 6.66E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene22790 | 0.824544 | 7.62E-54 | -1.69E-46 |
| MS.gene051381 | MS.gene22790 | 0.813334 | 2.70E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene22790 | 0.809574 | 1.77E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene22790 | 0.811337 | 7.36E-51 | -1.69E-46 |
| MS.gene052036 | MS.gene22790 | 0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene22790 | 0.82872 | 7.69E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene22790 | 0.833943 | 3.99E-56 | -1.69E-46 |
| MS.gene052342 | MS.gene22790 | 0.810895 | 9.18E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene22790 | 0.821912 | 3.14E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene22790 | 0.808081 | 3.69E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene22790 | 0.831251 | 1.86E-55 | -1.69E-46 |
| MS.gene052776 | MS.gene22790 | 0.801225 | 9.96E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene22790 | 0.834022 | 3.81E-56 | -1.69E-46 |
| MS.gene053143 | MS.gene22790 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene22790 | 0.803052 | 4.19E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene22790 | 0.808593 | 2.87E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene22790 | 0.810219 | 1.28E-50 | -1.69E-46 |
| MS.gene054004 | MS.gene22790 | 0.815309 | 9.87E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene22790 | 0.817968 | 2.50E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene22790 | 0.800416 | 1.46E-48 | -1.69E-46 |
| MS.gene054892 | MS.gene22790 | 0.817797 | 2.74E-52 | -1.69E-46 |
| MS.gene054893 | MS.gene22790 | 0.822806 | 1.95E-53 | -1.69E-46 |
| MS.gene054957 | MS.gene22790 | 0.811953 | 5.41E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene22790 | 0.800921 | 1.15E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene22790 | 0.822099 | 2.84E-53 | -1.69E-46 |
| MS.gene056045 | MS.gene22790 | 0.82059 | 6.33E-53 | -1.69E-46 |
| MS.gene056097 | MS.gene22790 | 0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene22790 | 0.827319 | 1.67E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene22790 | 0.811708 | 6.12E-51 | -1.69E-46 |
| MS.gene056519 | MS.gene22790 | 0.808929 | 2.43E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene22790 | 0.8214 | 4.12E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene22790 | 0.814104 | 1.83E-51 | -1.69E-46 |
| MS.gene056831 | MS.gene22790 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene22790 | 0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene22790 | 0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene22790 | 0.832769 | 7.82E-56 | -1.69E-46 |
| MS.gene057155 | MS.gene22790 | 0.812674 | 3.76E-51 | -1.69E-46 |
| MS.gene057174 | MS.gene22790 | 0.804817 | 1.80E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene22790 | 0.801894 | 7.26E-49 | -1.69E-46 |
| MS.gene057890 | MS.gene22790 | -0.812203 | 4.77E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene22790 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene058159 | MS.gene22790 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene22790 | 0.825146 | 5.50E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene22790 | 0.804283 | 2.33E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene22790 | 0.830833 | 2.35E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene22790 | 0.803941 | 2.74E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene22790 | 0.844874 | 5.77E-59 | -1.69E-46 |
| MS.gene059170 | MS.gene22790 | 0.819127 | 1.37E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene22790 | 0.840432 | 8.73E-58 | -1.69E-46 |
| MS.gene060244 | MS.gene22790 | 0.800444 | 1.44E-48 | -1.69E-46 |
| MS.gene060259 | MS.gene22790 | 0.82194 | 3.09E-53 | -1.69E-46 |
| MS.gene060435 | MS.gene22790 | 0.812546 | 4.02E-51 | -1.69E-46 |
| MS.gene060522 | MS.gene22790 | 0.825091 | 5.66E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene22790 | 0.803158 | 3.98E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene22790 | 0.865456 | 5.83E-65 | -1.69E-46 |
| MS.gene060935 | MS.gene22790 | 0.862734 | 4.11E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene22790 | 0.873696 | 1.20E-67 | -1.69E-46 |
| MS.gene061100 | MS.gene22790 | 0.854624 | 1.09E-61 | -1.69E-46 |
| MS.gene061160 | MS.gene22790 | 0.841946 | 3.49E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89105 | MS.gene22790 | PPI |
| MS.gene61229 | MS.gene22790 | PPI |
| MS.gene22790 | MS.gene61203 | PPI |
| MS.gene36290 | MS.gene22790 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22790.t1 | MTR_7g112570 | 98.515 | 606 | 9 | 0 | 1 | 606 | 74 | 679 | 0.0 | 1187 |
| MS.gene22790.t1 | MTR_7g112570 | 98.102 | 527 | 10 | 0 | 1 | 527 | 74 | 600 | 0.0 | 1029 |
| MS.gene22790.t1 | MTR_7g112570 | 27.423 | 423 | 249 | 5 | 203 | 571 | 149 | 567 | 1.15e-31 | 130 |
| MS.gene22790.t1 | MTR_7g112570 | 97.913 | 527 | 11 | 0 | 1 | 527 | 74 | 600 | 0.0 | 1027 |
| MS.gene22790.t1 | MTR_7g112570 | 27.423 | 423 | 249 | 5 | 203 | 571 | 149 | 567 | 1.30e-31 | 130 |
| MS.gene22790.t1 | MTR_4g013255 | 40.198 | 607 | 352 | 7 | 2 | 605 | 48 | 646 | 1.82e-128 | 392 |
| MS.gene22790.t1 | MTR_2g021030 | 29.741 | 464 | 319 | 7 | 124 | 582 | 127 | 588 | 2.11e-44 | 167 |
| MS.gene22790.t1 | MTR_2g021030 | 27.800 | 500 | 324 | 8 | 21 | 515 | 132 | 599 | 8.29e-38 | 148 |
| MS.gene22790.t1 | MTR_2g021030 | 24.214 | 318 | 197 | 6 | 1 | 287 | 297 | 601 | 2.56e-11 | 67.0 |
| MS.gene22790.t1 | MTR_1g012520 | 28.884 | 457 | 286 | 15 | 111 | 541 | 163 | 606 | 3.05e-29 | 123 |
| MS.gene22790.t1 | MTR_1g012520 | 27.549 | 461 | 271 | 11 | 19 | 470 | 205 | 611 | 4.01e-25 | 110 |
| MS.gene22790.t1 | MTR_1g012520 | 27.652 | 264 | 178 | 6 | 326 | 580 | 174 | 433 | 2.17e-18 | 89.4 |
| MS.gene22790.t1 | MTR_2g021030 | 29.377 | 337 | 209 | 6 | 124 | 457 | 127 | 437 | 3.12e-27 | 115 |
| MS.gene22790.t1 | MTR_2g021030 | 27.928 | 333 | 204 | 7 | 225 | 549 | 126 | 430 | 3.36e-25 | 109 |
| MS.gene22790.t1 | MTR_2g021030 | 27.463 | 335 | 207 | 7 | 21 | 351 | 132 | 434 | 2.56e-20 | 94.7 |
| MS.gene22790.t1 | MTR_4g114640 | 29.279 | 444 | 298 | 12 | 104 | 532 | 144 | 586 | 1.42e-25 | 112 |
| MS.gene22790.t1 | MTR_4g114640 | 30.000 | 260 | 176 | 5 | 326 | 580 | 165 | 423 | 7.19e-18 | 87.8 |
| MS.gene22790.t1 | MTR_4g114640 | 25.641 | 507 | 280 | 16 | 62 | 528 | 182 | 631 | 2.34e-16 | 83.2 |
| MS.gene22790.t1 | MTR_4g114640 | 26.562 | 320 | 203 | 8 | 277 | 590 | 167 | 460 | 4.54e-16 | 82.0 |
| MS.gene22790.t1 | MTR_1g114610 | 27.597 | 308 | 214 | 7 | 87 | 385 | 83 | 390 | 4.33e-25 | 108 |
| MS.gene22790.t1 | MTR_1g114610 | 28.896 | 308 | 184 | 7 | 255 | 529 | 101 | 406 | 8.22e-25 | 107 |
| MS.gene22790.t1 | MTR_1g114610 | 30.396 | 227 | 153 | 4 | 328 | 549 | 95 | 321 | 1.05e-18 | 89.4 |
| MS.gene22790.t1 | MTR_3g107280 | 26.402 | 428 | 268 | 13 | 117 | 516 | 169 | 577 | 1.84e-24 | 108 |
| MS.gene22790.t1 | MTR_3g107280 | 25.377 | 398 | 230 | 15 | 29 | 390 | 213 | 579 | 4.32e-18 | 88.6 |
| MS.gene22790.t1 | MTR_3g107280 | 24.473 | 237 | 149 | 4 | 326 | 532 | 172 | 408 | 1.60e-15 | 80.5 |
| MS.gene22790.t1 | MTR_3g107280 | 24.267 | 375 | 238 | 11 | 29 | 390 | 265 | 606 | 1.43e-14 | 77.4 |
| MS.gene22790.t1 | MTR_4g114650 | 27.802 | 464 | 256 | 12 | 132 | 547 | 166 | 598 | 3.93e-22 | 101 |
| MS.gene22790.t1 | MTR_4g114650 | 23.168 | 505 | 312 | 14 | 62 | 547 | 173 | 620 | 6.44e-13 | 72.0 |
| MS.gene22790.t1 | MTR_4g114650 | 27.802 | 464 | 256 | 12 | 132 | 547 | 162 | 594 | 4.01e-22 | 101 |
| MS.gene22790.t1 | MTR_4g114650 | 23.168 | 505 | 312 | 14 | 62 | 547 | 169 | 616 | 6.47e-13 | 72.0 |
| MS.gene22790.t1 | MTR_4g114650 | 27.802 | 464 | 256 | 12 | 132 | 547 | 217 | 649 | 5.39e-22 | 101 |
| MS.gene22790.t1 | MTR_4g114650 | 23.168 | 505 | 312 | 14 | 62 | 547 | 224 | 671 | 7.75e-13 | 72.0 |
| MS.gene22790.t1 | MTR_1g054625 | 33.498 | 203 | 129 | 3 | 320 | 517 | 84 | 285 | 1.41e-20 | 94.0 |
| MS.gene22790.t1 | MTR_1g054625 | 29.907 | 214 | 145 | 3 | 276 | 488 | 121 | 330 | 9.66e-18 | 85.5 |
| MS.gene22790.t1 | MTR_1g054625 | 29.565 | 345 | 191 | 12 | 48 | 380 | 25 | 329 | 1.40e-15 | 79.0 |
| MS.gene22790.t1 | MTR_1g054625 | 25.100 | 251 | 173 | 6 | 25 | 264 | 75 | 321 | 1.11e-12 | 70.1 |
| MS.gene22790.t1 | MTR_4g019320 | 26.303 | 422 | 279 | 11 | 111 | 508 | 105 | 518 | 4.00e-20 | 94.7 |
| MS.gene22790.t1 | MTR_1g015450 | 26.809 | 470 | 280 | 15 | 69 | 516 | 343 | 770 | 4.22e-20 | 95.5 |
| MS.gene22790.t1 | MTR_1g015480 | 27.293 | 447 | 244 | 14 | 113 | 516 | 180 | 588 | 6.24e-20 | 94.7 |
| MS.gene22790.t1 | MTR_1g054625 | 34.463 | 177 | 114 | 2 | 342 | 517 | 13 | 188 | 1.01e-19 | 89.4 |
| MS.gene22790.t1 | MTR_1g054625 | 29.907 | 214 | 145 | 3 | 276 | 488 | 24 | 233 | 7.06e-18 | 84.0 |
| MS.gene22790.t1 | MTR_1g054625 | 26.106 | 226 | 153 | 5 | 50 | 264 | 2 | 224 | 1.87e-11 | 65.1 |
| MS.gene22790.t1 | MTR_1g054625 | 29.839 | 248 | 139 | 7 | 139 | 380 | 14 | 232 | 1.98e-11 | 65.1 |
| MS.gene22790.t1 | MTR_8g028140 | 32.934 | 167 | 83 | 3 | 369 | 534 | 17 | 155 | 4.47e-19 | 89.0 |
| MS.gene22790.t1 | MTR_8g028140 | 29.078 | 282 | 169 | 5 | 107 | 386 | 37 | 289 | 8.54e-18 | 85.1 |
| MS.gene22790.t1 | MTR_8g028140 | 27.778 | 252 | 156 | 7 | 290 | 516 | 15 | 265 | 7.79e-16 | 79.3 |
| MS.gene22790.t1 | MTR_8g028140 | 26.441 | 295 | 177 | 8 | 24 | 288 | 10 | 294 | 1.54e-15 | 78.2 |
| MS.gene22790.t1 | MTR_8g028140 | 30.928 | 194 | 104 | 4 | 342 | 534 | 71 | 235 | 4.73e-19 | 90.1 |
| MS.gene22790.t1 | MTR_8g028140 | 28.025 | 314 | 194 | 6 | 76 | 386 | 85 | 369 | 1.21e-17 | 85.9 |
| MS.gene22790.t1 | MTR_8g028140 | 27.778 | 252 | 156 | 7 | 290 | 516 | 95 | 345 | 2.51e-15 | 78.6 |
| MS.gene22790.t1 | MTR_8g028140 | 26.441 | 295 | 177 | 8 | 24 | 288 | 90 | 374 | 3.17e-15 | 78.2 |
| MS.gene22790.t1 | MTR_8g028140 | 26.471 | 340 | 210 | 7 | 101 | 410 | 39 | 368 | 1.74e-11 | 66.6 |
| MS.gene22790.t1 | MTR_1g029500 | 28.968 | 252 | 138 | 5 | 255 | 494 | 84 | 306 | 2.28e-18 | 87.4 |
| MS.gene22790.t1 | MTR_1g029500 | 24.865 | 370 | 186 | 13 | 76 | 415 | 29 | 336 | 7.21e-14 | 73.9 |
| MS.gene22790.t1 | MTR_4g133640 | 23.050 | 564 | 343 | 13 | 1 | 526 | 63 | 573 | 9.77e-18 | 87.4 |
| MS.gene22790.t1 | MTR_6g016905 | 21.807 | 509 | 322 | 11 | 31 | 535 | 108 | 544 | 1.69e-17 | 86.3 |
| MS.gene22790.t1 | MTR_3g088895 | 34.437 | 151 | 97 | 2 | 314 | 462 | 127 | 277 | 1.98e-17 | 84.7 |
| MS.gene22790.t1 | MTR_3g088895 | 34.731 | 167 | 106 | 3 | 330 | 493 | 117 | 283 | 3.10e-13 | 72.0 |
| MS.gene22790.t1 | MTR_3g088895 | 25.723 | 311 | 172 | 11 | 139 | 416 | 77 | 361 | 5.62e-13 | 71.2 |
| MS.gene22790.t1 | MTR_3g074570 | 25.405 | 370 | 222 | 11 | 191 | 531 | 72 | 416 | 5.88e-17 | 84.0 |
| MS.gene22790.t1 | MTR_2g007590 | 22.735 | 585 | 350 | 14 | 1 | 541 | 63 | 589 | 7.08e-16 | 81.3 |
| MS.gene22790.t1 | MTR_4g006450 | 26.735 | 490 | 276 | 21 | 20 | 458 | 63 | 520 | 1.59e-15 | 80.1 |
| MS.gene22790.t1 | MTR_8g045150 | 24.625 | 333 | 198 | 6 | 198 | 478 | 119 | 450 | 1.61e-15 | 80.1 |
| MS.gene22790.t1 | MTR_5g075860 | 23.422 | 491 | 293 | 16 | 18 | 442 | 62 | 535 | 1.80e-15 | 80.1 |
| MS.gene22790.t1 | MTR_3g465770 | 23.188 | 414 | 283 | 11 | 155 | 543 | 149 | 552 | 2.42e-15 | 79.7 |
| MS.gene22790.t1 | MTR_4g094932 | 26.741 | 359 | 196 | 12 | 106 | 431 | 110 | 434 | 1.37e-14 | 77.0 |
| MS.gene22790.t1 | MTR_4g094932 | 28.125 | 320 | 214 | 12 | 200 | 508 | 120 | 434 | 1.95e-11 | 67.0 |
| MS.gene22790.t1 | MTR_5g095830 | 24.879 | 414 | 260 | 11 | 157 | 526 | 177 | 583 | 2.95e-14 | 76.3 |
| MS.gene22790.t1 | MTR_5g095830 | 23.506 | 502 | 301 | 19 | 1 | 431 | 76 | 565 | 5.79e-11 | 65.9 |
| MS.gene22790.t1 | MTR_8g017160 | 23.126 | 467 | 328 | 10 | 88 | 531 | 94 | 552 | 4.63e-13 | 72.4 |
| MS.gene22790.t1 | MTR_8g017160 | 22.566 | 452 | 295 | 10 | 65 | 469 | 150 | 593 | 2.05e-12 | 70.5 |
| MS.gene22790.t1 | MTR_6g016725 | 22.932 | 532 | 337 | 18 | 1 | 497 | 103 | 596 | 5.10e-13 | 72.4 |
| MS.gene22790.t1 | MTR_3g006050 | 23.056 | 360 | 243 | 6 | 200 | 526 | 218 | 576 | 6.62e-13 | 72.0 |
| MS.gene22790.t1 | MTR_3g110740 | 23.168 | 423 | 251 | 11 | 112 | 465 | 136 | 553 | 7.00e-13 | 72.0 |
| MS.gene22790.t1 | MTR_8g037780 | 23.265 | 490 | 307 | 15 | 31 | 469 | 116 | 587 | 3.54e-12 | 69.7 |
| MS.gene22790.t1 | MTR_4g009030 | 24.000 | 475 | 301 | 11 | 88 | 510 | 65 | 531 | 4.67e-12 | 69.3 |
| MS.gene22790.t1 | MTR_4g021765 | 24.516 | 310 | 183 | 6 | 184 | 466 | 45 | 330 | 7.89e-12 | 67.4 |
| MS.gene22790.t1 | MTR_1g114010 | 26.062 | 353 | 194 | 11 | 200 | 531 | 150 | 456 | 2.64e-11 | 67.0 |
| MS.gene22790.t1 | MTR_3g083280 | 23.596 | 445 | 279 | 14 | 21 | 458 | 82 | 472 | 3.03e-11 | 66.6 |
| MS.gene22790.t1 | MTR_1g114010 | 26.062 | 353 | 194 | 11 | 200 | 531 | 80 | 386 | 3.17e-11 | 66.2 |
| MS.gene22790.t1 | MTR_1g050478 | 25.685 | 292 | 204 | 6 | 185 | 465 | 197 | 486 | 3.40e-11 | 66.6 |
| MS.gene22790.t1 | MTR_4g006240 | 23.729 | 531 | 332 | 14 | 19 | 532 | 58 | 532 | 4.01e-11 | 66.2 |
| MS.gene22790.t1 | MTR_1g114010 | 26.062 | 353 | 194 | 11 | 200 | 531 | 71 | 377 | 4.10e-11 | 65.9 |
| MS.gene22790.t1 | MTR_8g098695 | 24.353 | 464 | 290 | 16 | 113 | 548 | 105 | 535 | 5.06e-11 | 65.9 |
| MS.gene22790.t1 | MTR_1g114010 | 26.062 | 353 | 194 | 11 | 200 | 531 | 231 | 537 | 5.23e-11 | 65.9 |
| MS.gene22790.t1 | MTR_4g435338 | 26.705 | 176 | 106 | 2 | 317 | 469 | 144 | 319 | 6.88e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22790.t1 | AT5G27920 | 57.825 | 607 | 254 | 2 | 1 | 606 | 37 | 642 | 0.0 | 633 |
| MS.gene22790.t1 | AT5G01720 | 40.165 | 605 | 354 | 6 | 2 | 605 | 45 | 642 | 9.72e-117 | 362 |
| MS.gene22790.t1 | AT4G15475 | 29.399 | 466 | 318 | 8 | 124 | 582 | 127 | 588 | 1.83e-43 | 165 |
| MS.gene22790.t1 | AT4G15475 | 28.713 | 505 | 323 | 9 | 21 | 520 | 132 | 604 | 3.73e-38 | 149 |
| MS.gene22790.t1 | AT4G15475 | 25.436 | 401 | 218 | 7 | 238 | 559 | 116 | 514 | 4.71e-23 | 103 |
| MS.gene22790.t1 | AT2G25490 | 27.962 | 422 | 248 | 11 | 124 | 526 | 190 | 574 | 4.44e-28 | 119 |
| MS.gene22790.t1 | AT2G25490 | 29.658 | 263 | 176 | 6 | 258 | 513 | 145 | 405 | 1.14e-20 | 96.7 |
| MS.gene22790.t1 | AT2G25490 | 26.521 | 411 | 259 | 12 | 62 | 433 | 205 | 611 | 7.55e-20 | 94.0 |
| MS.gene22790.t1 | AT2G25490 | 27.715 | 267 | 162 | 5 | 345 | 580 | 155 | 421 | 1.58e-17 | 86.7 |
| MS.gene22790.t1 | AT2G25490 | 25.176 | 425 | 204 | 10 | 77 | 388 | 194 | 617 | 2.75e-14 | 76.6 |
| MS.gene22790.t1 | AT5G25350 | 28.082 | 438 | 278 | 12 | 124 | 549 | 154 | 566 | 1.26e-26 | 115 |
| MS.gene22790.t1 | AT5G25350 | 24.724 | 453 | 272 | 12 | 31 | 470 | 195 | 591 | 1.92e-22 | 102 |
| MS.gene22790.t1 | AT5G25350 | 26.426 | 333 | 197 | 8 | 272 | 587 | 117 | 418 | 1.80e-15 | 80.1 |
| MS.gene22790.t1 | AT5G25350 | 24.941 | 425 | 252 | 11 | 19 | 431 | 235 | 604 | 1.09e-13 | 74.7 |
| MS.gene22790.t1 | AT5G23340 | 28.889 | 315 | 210 | 9 | 87 | 393 | 73 | 381 | 6.21e-25 | 107 |
| MS.gene22790.t1 | AT5G23340 | 29.104 | 268 | 157 | 7 | 255 | 517 | 91 | 330 | 4.43e-19 | 90.5 |
| MS.gene22790.t1 | AT5G23340 | 29.596 | 223 | 152 | 5 | 354 | 571 | 85 | 307 | 2.10e-16 | 82.0 |
| MS.gene22790.t1 | AT5G23340 | 34.132 | 167 | 102 | 3 | 359 | 517 | 58 | 224 | 1.05e-14 | 77.0 |
| MS.gene22790.t1 | AT5G23340 | 25.397 | 378 | 236 | 11 | 1 | 363 | 37 | 383 | 3.53e-14 | 75.1 |
| MS.gene22790.t1 | AT3G58530 | 34.715 | 193 | 124 | 2 | 276 | 467 | 123 | 314 | 3.91e-21 | 95.9 |
| MS.gene22790.t1 | AT3G58530 | 29.064 | 203 | 138 | 3 | 320 | 517 | 86 | 287 | 3.46e-16 | 80.9 |
| MS.gene22790.t1 | AT3G58530 | 26.022 | 269 | 148 | 6 | 113 | 380 | 113 | 331 | 1.19e-15 | 79.3 |
| MS.gene22790.t1 | AT3G58530 | 28.099 | 242 | 166 | 5 | 185 | 421 | 109 | 347 | 3.17e-11 | 65.9 |
| MS.gene22790.t1 | AT1G77000 | 31.429 | 210 | 117 | 3 | 269 | 476 | 96 | 280 | 4.85e-19 | 89.7 |
| MS.gene22790.t1 | AT1G77000 | 30.178 | 169 | 115 | 2 | 200 | 365 | 104 | 272 | 3.36e-15 | 78.2 |
| MS.gene22790.t1 | AT1G77000 | 33.333 | 156 | 101 | 3 | 389 | 541 | 114 | 269 | 4.50e-12 | 68.6 |
| MS.gene22790.t1 | AT1G77000 | 31.429 | 210 | 117 | 3 | 269 | 476 | 96 | 280 | 4.85e-19 | 89.7 |
| MS.gene22790.t1 | AT1G77000 | 30.178 | 169 | 115 | 2 | 200 | 365 | 104 | 272 | 3.36e-15 | 78.2 |
| MS.gene22790.t1 | AT1G77000 | 33.333 | 156 | 101 | 3 | 389 | 541 | 114 | 269 | 4.50e-12 | 68.6 |
| MS.gene22790.t1 | AT1G21410 | 31.683 | 202 | 111 | 3 | 270 | 469 | 97 | 273 | 1.95e-18 | 87.8 |
| MS.gene22790.t1 | AT1G21410 | 32.584 | 178 | 115 | 5 | 369 | 541 | 92 | 269 | 1.03e-13 | 73.6 |
| MS.gene22790.t1 | AT1G21410 | 25.862 | 232 | 118 | 6 | 138 | 365 | 91 | 272 | 4.54e-12 | 68.6 |
| MS.gene22790.t1 | AT1G21410 | 24.615 | 260 | 156 | 7 | 20 | 250 | 81 | 329 | 1.41e-11 | 67.0 |
| MS.gene22790.t1 | AT1G21410 | 31.683 | 202 | 111 | 3 | 270 | 469 | 97 | 273 | 1.95e-18 | 87.8 |
| MS.gene22790.t1 | AT1G21410 | 32.584 | 178 | 115 | 5 | 369 | 541 | 92 | 269 | 1.03e-13 | 73.6 |
| MS.gene22790.t1 | AT1G21410 | 25.862 | 232 | 118 | 6 | 138 | 365 | 91 | 272 | 4.54e-12 | 68.6 |
| MS.gene22790.t1 | AT1G21410 | 24.615 | 260 | 156 | 7 | 20 | 250 | 81 | 329 | 1.41e-11 | 67.0 |
| MS.gene22790.t1 | AT4G33210 | 25.714 | 490 | 290 | 20 | 69 | 530 | 352 | 795 | 6.59e-18 | 88.6 |
| MS.gene22790.t1 | AT4G33210 | 25.705 | 319 | 203 | 10 | 211 | 511 | 265 | 567 | 4.47e-12 | 69.7 |
| MS.gene22790.t1 | AT1G80630 | 25.053 | 475 | 296 | 11 | 88 | 544 | 90 | 522 | 1.72e-17 | 86.7 |
| MS.gene22790.t1 | AT1G47056 | 24.784 | 347 | 219 | 11 | 120 | 457 | 113 | 426 | 5.87e-17 | 84.7 |
| MS.gene22790.t1 | AT4G07400 | 27.762 | 353 | 208 | 12 | 120 | 461 | 147 | 463 | 4.86e-16 | 82.0 |
| MS.gene22790.t1 | AT1G77000 | 38.931 | 131 | 78 | 2 | 330 | 458 | 106 | 236 | 4.78e-15 | 75.9 |
| MS.gene22790.t1 | AT1G77000 | 31.515 | 165 | 86 | 3 | 269 | 431 | 96 | 235 | 6.81e-12 | 66.6 |
| MS.gene22790.t1 | AT1G77000 | 38.931 | 131 | 78 | 2 | 330 | 458 | 106 | 236 | 4.78e-15 | 75.9 |
| MS.gene22790.t1 | AT1G77000 | 31.515 | 165 | 86 | 3 | 269 | 431 | 96 | 235 | 6.81e-12 | 66.6 |
| MS.gene22790.t1 | AT5G67250 | 25.982 | 331 | 208 | 7 | 120 | 443 | 116 | 416 | 8.08e-15 | 77.8 |
| MS.gene22790.t1 | AT3G07550 | 28.889 | 270 | 157 | 9 | 277 | 516 | 78 | 342 | 2.38e-14 | 75.9 |
| MS.gene22790.t1 | AT3G07550 | 28.889 | 270 | 157 | 9 | 277 | 516 | 78 | 342 | 2.38e-14 | 75.9 |
| MS.gene22790.t1 | AT3G07550 | 29.046 | 241 | 139 | 6 | 317 | 529 | 92 | 328 | 2.50e-14 | 75.5 |
| MS.gene22790.t1 | AT1G55590 | 26.446 | 242 | 163 | 6 | 303 | 531 | 298 | 537 | 1.33e-13 | 74.3 |
| MS.gene22790.t1 | AT1G55590 | 28.512 | 242 | 156 | 7 | 239 | 466 | 311 | 549 | 2.21e-13 | 73.6 |
| MS.gene22790.t1 | AT1G80570 | 25.676 | 370 | 206 | 8 | 274 | 577 | 94 | 460 | 1.11e-12 | 70.9 |
| MS.gene22790.t1 | AT1G80570 | 24.937 | 397 | 210 | 11 | 124 | 462 | 97 | 463 | 1.63e-11 | 67.4 |
| MS.gene22790.t1 | AT1G80570 | 25.676 | 370 | 206 | 8 | 274 | 577 | 81 | 447 | 1.50e-12 | 70.5 |
| MS.gene22790.t1 | AT1G80570 | 24.937 | 397 | 210 | 11 | 124 | 462 | 84 | 450 | 2.07e-11 | 67.0 |
| MS.gene22790.t1 | AT1G80570 | 25.676 | 370 | 206 | 8 | 274 | 577 | 81 | 447 | 1.50e-12 | 70.5 |
| MS.gene22790.t1 | AT1G80570 | 24.937 | 397 | 210 | 11 | 124 | 462 | 84 | 450 | 2.07e-11 | 67.0 |
| MS.gene22790.t1 | AT2G17020 | 27.052 | 329 | 185 | 12 | 200 | 517 | 72 | 356 | 2.88e-12 | 69.7 |
| MS.gene22790.t1 | AT2G17020 | 27.052 | 329 | 185 | 12 | 200 | 517 | 213 | 497 | 3.23e-12 | 70.1 |
| MS.gene22790.t1 | AT2G17020 | 27.052 | 329 | 185 | 12 | 200 | 517 | 246 | 530 | 8.78e-12 | 68.6 |
| MS.gene22790.t1 | AT3G50080 | 24.927 | 341 | 225 | 9 | 120 | 458 | 114 | 425 | 3.02e-11 | 66.6 |
| MS.gene22790.t1 | AT5G07670 | 26.996 | 263 | 172 | 6 | 257 | 511 | 180 | 430 | 7.15e-11 | 65.5 |
Find 140 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTCAAGTTCGGTCAATTT+TGG | 0.193845 | 7.2:-4300024 | None:intergenic |
| TGTTTAGGAGTTACTGATAT+TGG | 0.241724 | 7.2:+4298290 | MS.gene22790:CDS |
| GTTTCCCATTGTTGGGGTTT+TGG | 0.243732 | 7.2:+4298206 | MS.gene22790:CDS |
| TTGGTTTAAGCAAATGTATT+GGG | 0.257235 | 7.2:+4299553 | MS.gene22790:CDS |
| TCCGACCACAACAAGATATA+AGG | 0.274694 | 7.2:-4301612 | None:intergenic |
| ATTAATATTGATAAGTGTTT+AGG | 0.282985 | 7.2:+4298275 | MS.gene22790:CDS |
| TTGCATCCTGGAGGCGCTTC+AGG | 0.298755 | 7.2:-4301543 | None:intergenic |
| AATTGACGGTGTTCGAGTTT+CGG | 0.311508 | 7.2:+4299482 | MS.gene22790:CDS |
| TGACCTTGCACCCTCGTTCA+TGG | 0.325451 | 7.2:-4301699 | None:intergenic |
| CTGAGTCGAGTTACCGGGTT+AGG | 0.331335 | 7.2:+4298128 | MS.gene22790:CDS |
| GGGTTGCAGTTTCTTGAAAA+AGG | 0.333034 | 7.2:+4299044 | MS.gene22790:CDS |
| CGGTTGATGTTTCCCATTGT+TGG | 0.333947 | 7.2:+4298198 | MS.gene22790:CDS |
| AACTTCAGACTTGCAAGGTT+TGG | 0.334817 | 7.2:-4299690 | None:intergenic |
| GGTTGATGTTTCCCATTGTT+GGG | 0.335725 | 7.2:+4298199 | MS.gene22790:CDS |
| GTTTAGGAGTTACTGATATT+GGG | 0.356827 | 7.2:+4298291 | MS.gene22790:CDS |
| AAACTTGTAAGATTGAAGTT+AGG | 0.368296 | 7.2:+4299949 | MS.gene22790:CDS |
| CCCTTATATCTTGTTGTGGT+CGG | 0.373630 | 7.2:+4301611 | MS.gene22790:CDS |
| GTTTGGAGATTTCTGATCTT+GGG | 0.385615 | 7.2:+4298369 | MS.gene22790:CDS |
| TGTGATATGGTTACTGAGAT+TGG | 0.386765 | 7.2:+4299720 | MS.gene22790:CDS |
| TGCAGTCAGTTGCAAGAGAT+TGG | 0.388377 | 7.2:+4300345 | MS.gene22790:CDS |
| GTTGAGTTTGAAATGGTGTT+TGG | 0.390364 | 7.2:+4298352 | MS.gene22790:CDS |
| CTTGGTTTAAGCAAATGTAT+TGG | 0.391377 | 7.2:+4299552 | MS.gene22790:CDS |
| TTGATACTGAGTCGAGTTAC+CGG | 0.396382 | 7.2:+4298122 | MS.gene22790:CDS |
| TGCTATTTAGTGGATGATGT+GGG | 0.402586 | 7.2:+4299023 | MS.gene22790:CDS |
| CTTGTTAATGTCACCATACA+AGG | 0.409638 | 7.2:+4301577 | MS.gene22790:CDS |
| TGTTTGGAGATTTCTGATCT+TGG | 0.412657 | 7.2:+4298368 | MS.gene22790:CDS |
| GAAGTTAGAGTCTTGTGATA+TGG | 0.414100 | 7.2:+4299707 | MS.gene22790:CDS |
| ACTACACCCAACAGCAATCT+TGG | 0.422148 | 7.2:-4298318 | None:intergenic |
| TGCTGTTGGGTGTAGTAAGT+TGG | 0.422629 | 7.2:+4298325 | MS.gene22790:CDS |
| TGCAATTGGAGCCGATGATC+TGG | 0.424186 | 7.2:-4299515 | None:intergenic |
| TTGGTCATCGAGTTGGACTC+TGG | 0.427056 | 7.2:+4298088 | MS.gene22790:CDS |
| TTTGACTAAAGATTTGCAAT+TGG | 0.432024 | 7.2:-4299529 | None:intergenic |
| TTGTTGTGGTCGGATTAAAA+AGG | 0.435833 | 7.2:+4301621 | MS.gene22790:CDS |
| CTTGACCTTACTGACTGTTC+TGG | 0.436002 | 7.2:+4299783 | MS.gene22790:CDS |
| TCAACCTAGCATATTGCAAT+AGG | 0.436371 | 7.2:+4300221 | MS.gene22790:CDS |
| TGCAAATCTTTAGTCAAACT+TGG | 0.441255 | 7.2:+4299534 | MS.gene22790:CDS |
| TGGGTTGGAGATGTTGATTA+AGG | 0.442315 | 7.2:+4298157 | MS.gene22790:CDS |
| CCGACCACAACAAGATATAA+GGG | 0.451659 | 7.2:-4301611 | None:intergenic |
| TTGATCTTTCCGTTTGTCCA+TGG | 0.452761 | 7.2:+4298030 | MS.gene22790:CDS |
| TGTATTGGGGTGACCAACTT+GGG | 0.454831 | 7.2:+4299567 | MS.gene22790:CDS |
| GGCTTGTCCGTTGTTGGAAG+CGG | 0.457675 | 7.2:+4298178 | MS.gene22790:CDS |
| TGAGTAACAAACCTTGAGAT+AGG | 0.460510 | 7.2:-4298441 | None:intergenic |
| TAGTATGCAAGGAGTTTCTC+CGG | 0.462272 | 7.2:+4297919 | None:intergenic |
| TAAAGTTCAATTACCGATAG+AGG | 0.463621 | 7.2:-4300044 | None:intergenic |
| GACTTTATCCTCCAGATCAT+CGG | 0.466196 | 7.2:+4299504 | MS.gene22790:CDS |
| TAATGTCACCATACAAGGAT+TGG | 0.466254 | 7.2:+4301582 | MS.gene22790:CDS |
| TTGGGGATTATGCAGGTAGT+AGG | 0.470531 | 7.2:+4299585 | MS.gene22790:CDS |
| GAGTAACCTGAAGCGCCTCC+AGG | 0.471725 | 7.2:+4301537 | MS.gene22790:CDS |
| ATGTATTGGGGTGACCAACT+TGG | 0.482642 | 7.2:+4299566 | MS.gene22790:CDS |
| CTTTCAAACATCACGAGCAT+TGG | 0.483716 | 7.2:+4300310 | MS.gene22790:CDS |
| ATCACCAAAACCCCAACAAT+GGG | 0.485994 | 7.2:-4298210 | None:intergenic |
| TGTAACTGCGTTAGCCCATC+CGG | 0.488352 | 7.2:+4299231 | MS.gene22790:CDS |
| AACGAGGGTGCAAGGTCAGA+TGG | 0.489471 | 7.2:+4301704 | MS.gene22790:CDS |
| GGGCTAGCAGCACTCACAAC+CGG | 0.492449 | 7.2:+4300178 | MS.gene22790:CDS |
| TGTGTACGCATAGGAGATGA+TGG | 0.493543 | 7.2:+4300157 | MS.gene22790:CDS |
| CGGGTTAGGGTACGTTGGGT+TGG | 0.493821 | 7.2:+4298142 | MS.gene22790:CDS |
| TGGAGAAGTTGAGTTTGAAA+TGG | 0.494463 | 7.2:+4298345 | MS.gene22790:CDS |
| ATCCTCGATCCATGGACAAA+CGG | 0.494791 | 7.2:-4298039 | None:intergenic |
| AACTTGATCCAATCTGATAC+AGG | 0.498440 | 7.2:-4299743 | None:intergenic |
| TTGAGCGTAATTAGAATTGA+CGG | 0.500560 | 7.2:+4299468 | MS.gene22790:CDS |
| TATGGTGGGATGCTATTTAG+TGG | 0.503476 | 7.2:+4299013 | MS.gene22790:CDS |
| GGCTTATTATCAGTAATTAG+TGG | 0.504182 | 7.2:+4299252 | MS.gene22790:CDS |
| GAGATTGGCCTGTATCAGAT+TGG | 0.508552 | 7.2:+4299735 | MS.gene22790:CDS |
| GGAAAACCATTCGGATTCTC+CGG | 0.511234 | 7.2:+4297958 | MS.gene22790:CDS |
| GGCAAGCTCCAATCCTTGTA+TGG | 0.516053 | 7.2:-4301590 | None:intergenic |
| GGGTTGGCCAAGATTGCTGT+TGG | 0.516666 | 7.2:+4298311 | MS.gene22790:CDS |
| TCTCGATGTTTCCTATCTCA+AGG | 0.517096 | 7.2:+4298430 | MS.gene22790:CDS |
| TTATTCACAAAACCTACTGC+AGG | 0.517744 | 7.2:+4300429 | MS.gene22790:CDS |
| TGACCGAACTTGACCTCTAT+CGG | 0.517917 | 7.2:+4300031 | MS.gene22790:CDS |
| CAACAACCCGGAAAACCATT+CGG | 0.518160 | 7.2:+4297949 | MS.gene22790:CDS |
| TTACCGGGTTAGGGTACGTT+GGG | 0.518958 | 7.2:+4298138 | MS.gene22790:CDS |
| GATTAAGGCTTGTCCGTTGT+TGG | 0.519624 | 7.2:+4298172 | MS.gene22790:CDS |
| GTTTGTCCATGGATCGAGGA+TGG | 0.519956 | 7.2:+4298041 | MS.gene22790:CDS |
| TATCGACTTTACTGAACCAT+TGG | 0.520255 | 7.2:+4298069 | MS.gene22790:CDS |
| ATGCTATTTAGTGGATGATG+TGG | 0.521818 | 7.2:+4299022 | MS.gene22790:CDS |
| CATGGCCAACTTGTTGCATC+CGG | 0.523833 | 7.2:-4300197 | None:intergenic |
| TGAACCATTGGTCATCGAGT+TGG | 0.523846 | 7.2:+4298081 | MS.gene22790:CDS |
| TATTGATCGTAAAGATTCGT+TGG | 0.528475 | 7.2:-4298961 | None:intergenic |
| GGTTGGCCAAGATTGCTGTT+GGG | 0.532427 | 7.2:+4298312 | MS.gene22790:CDS |
| GGTCTTGAGCAGATCAATGC+AGG | 0.536313 | 7.2:+4299282 | MS.gene22790:CDS |
| ACTAATTACTGATAATAAGC+CGG | 0.542644 | 7.2:-4299250 | None:intergenic |
| ACTGCTCCATCCTCGATCCA+TGG | 0.542978 | 7.2:-4298047 | None:intergenic |
| AGGAGTTACTGATATTGGGT+TGG | 0.548267 | 7.2:+4298295 | MS.gene22790:CDS |
| TTGAAGTGTATCAGCAATCT+CGG | 0.548402 | 7.2:+4300259 | MS.gene22790:CDS |
| TAATCCTATTGCAATATGCT+AGG | 0.548407 | 7.2:-4300225 | None:intergenic |
| GTTGATGTTTCCCATTGTTG+GGG | 0.555403 | 7.2:+4298200 | MS.gene22790:CDS |
| GCTGCTGCGTTATCGTGCGG+TGG | 0.555465 | 7.2:+4298239 | MS.gene22790:CDS |
| ACTCTAACTTCAGACTTGCA+AGG | 0.556844 | 7.2:-4299695 | None:intergenic |
| CTGCTGCGTTATCGTGCGGT+GGG | 0.557202 | 7.2:+4298240 | MS.gene22790:CDS |
| AGAGTTTGCTATAGTAGAGA+TGG | 0.560482 | 7.2:-4299664 | None:intergenic |
| TGGTCATCGAGTTGGACTCT+GGG | 0.561826 | 7.2:+4298089 | MS.gene22790:CDS |
| TTCCGTTTGTCCATGGATCG+AGG | 0.563226 | 7.2:+4298037 | MS.gene22790:CDS |
| TTACCGATAGAGGTCAAGTT+CGG | 0.565963 | 7.2:-4300034 | None:intergenic |
| ATCGTGCGGTGGGAAGTTGA+AGG | 0.566046 | 7.2:+4298250 | MS.gene22790:CDS |
| TATCACCAAAACCCCAACAA+TGG | 0.566383 | 7.2:-4298211 | None:intergenic |
| CTTGCCCTTATATCTTGTTG+TGG | 0.567087 | 7.2:+4301607 | MS.gene22790:CDS |
| ATCAGTAATTAGTGGACATG+AGG | 0.567675 | 7.2:+4299260 | MS.gene22790:CDS |
| TCCGGGTTGTTGATTCGACC+CGG | 0.568378 | 7.2:-4297938 | None:intergenic |
| GATTGTTTCGAGTATTTCTG+AGG | 0.574227 | 7.2:-4301677 | None:intergenic |
| AATCCATGAACGAGGGTGCA+AGG | 0.578850 | 7.2:+4301696 | MS.gene22790:CDS |
| AGTATGCAAGGAGTTTCTCC+GGG | 0.580560 | 7.2:+4297920 | None:intergenic |
| TAGAAAAGTACCTTGAGTAG+TGG | 0.582573 | 7.2:-4299071 | None:intergenic |
| TGATACTGAGTCGAGTTACC+GGG | 0.582599 | 7.2:+4298123 | MS.gene22790:CDS |
| AAACATATCAGACATAGGAT+TGG | 0.583300 | 7.2:+4299981 | MS.gene22790:CDS |
| GACCAACTTGGGGATTATGC+AGG | 0.583311 | 7.2:+4299578 | MS.gene22790:CDS |
| GCAATAGGATTACAGACGCA+GGG | 0.586052 | 7.2:+4300236 | MS.gene22790:CDS |
| TTCTTCAAGCCGTTAGTGAG+AGG | 0.587612 | 7.2:-4299435 | None:intergenic |
| TTACGCCAGAACAGTCAGTA+AGG | 0.589278 | 7.2:-4299788 | None:intergenic |
| ACATCAACCGCTTCCAACAA+CGG | 0.589589 | 7.2:-4298185 | None:intergenic |
| AAGTGAGTAAGAATTCAATC+CGG | 0.590350 | 7.2:-4297977 | None:intergenic |
| CACAACCGGATGCAACAAGT+TGG | 0.590752 | 7.2:+4300192 | MS.gene22790:CDS |
| TGGTTTAAGCAAATGTATTG+GGG | 0.591699 | 7.2:+4299554 | MS.gene22790:CDS |
| AAAAGGATGTCCACTACTCA+AGG | 0.592117 | 7.2:+4299061 | MS.gene22790:CDS |
| CTTTCAGCACCTCTCACTAA+CGG | 0.592218 | 7.2:+4299426 | MS.gene22790:CDS |
| TGCAGGCAATTGATGTATCA+AGG | 0.592534 | 7.2:+4299208 | MS.gene22790:intron |
| TGCAATAGGATTACAGACGC+AGG | 0.597246 | 7.2:+4300235 | MS.gene22790:CDS |
| TGTTCTGGCGTAAATGACAT+AGG | 0.598214 | 7.2:+4299798 | MS.gene22790:CDS |
| GAGTCCAACTCGATGACCAA+TGG | 0.598813 | 7.2:-4298085 | None:intergenic |
| ATTACTGATAATAAGCCGGA+TGG | 0.599380 | 7.2:-4299246 | None:intergenic |
| ACGAGGGTGCAAGGTCAGAT+GGG | 0.601675 | 7.2:+4301705 | MS.gene22790:CDS |
| AATTGCAGCTGTGTACGCAT+AGG | 0.603745 | 7.2:+4300148 | MS.gene22790:intron |
| TGAGTCGAGTTACCGGGTTA+GGG | 0.607957 | 7.2:+4298129 | MS.gene22790:CDS |
| TACCTGCATAATCCCCAAGT+TGG | 0.609296 | 7.2:-4299580 | None:intergenic |
| TTACTGATAATAAGCCGGAT+GGG | 0.610945 | 7.2:-4299245 | None:intergenic |
| CAACCCAACGTACCCTAACC+CGG | 0.612237 | 7.2:-4298141 | None:intergenic |
| GCAATATGCTAGGTTGAGCA+TGG | 0.616920 | 7.2:-4300215 | None:intergenic |
| TTCAATCCGGAGAATCCGAA+TGG | 0.621223 | 7.2:-4297964 | None:intergenic |
| CTCGAAACAATCCATGAACG+AGG | 0.626001 | 7.2:+4301688 | MS.gene22790:CDS |
| GTTACCGGGTTAGGGTACGT+TGG | 0.627895 | 7.2:+4298137 | MS.gene22790:CDS |
| TGATACCACTGACCTGCAGT+AGG | 0.633428 | 7.2:-4300441 | None:intergenic |
| GTATTGGGGTGACCAACTTG+GGG | 0.634312 | 7.2:+4299568 | MS.gene22790:CDS |
| GCTATTTAGTGGATGATGTG+GGG | 0.635421 | 7.2:+4299024 | MS.gene22790:CDS |
| TCAGTAATTAGTGGACATGA+GGG | 0.638404 | 7.2:+4299261 | MS.gene22790:CDS |
| TGCACAAACATATCAGACAT+AGG | 0.640787 | 7.2:+4299976 | MS.gene22790:CDS |
| GTGTACGCATAGGAGATGAT+GGG | 0.645765 | 7.2:+4300158 | MS.gene22790:CDS |
| AATTGGAGCCGATGATCTGG+AGG | 0.656827 | 7.2:-4299512 | None:intergenic |
| ACGTGTCAGATCATGTGTTG+TGG | 0.671433 | 7.2:+4301506 | MS.gene22790:CDS |
| TCCGGGTCGAATCAACAACC+CGG | 0.677782 | 7.2:+4297937 | MS.gene22790:CDS |
| GAGGCTGCTGCGTTATCGTG+CGG | 0.680487 | 7.2:+4298236 | MS.gene22790:CDS |
| TCGAAACAATCCATGAACGA+GGG | 0.712359 | 7.2:+4301689 | MS.gene22790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTTATAACAGTAAAATA+AGG | - | chr7.2:4299365-4299384 | None:intergenic | 15.0% |
| !! | ATTAATATTGATAAGTGTTT+AGG | + | chr7.2:4298275-4298294 | MS.gene22790:CDS | 15.0% |
| !! | TAATATCATAATATGAGAAA+CGG | - | chr7.2:4301103-4301122 | None:intergenic | 15.0% |
| !!! | TCATTTTGTTCTTTATAAAT+CGG | + | chr7.2:4301026-4301045 | MS.gene22790:intron | 15.0% |
| !! | AAATTAATAAAGTTTGACCA+AGG | + | chr7.2:4299125-4299144 | MS.gene22790:intron | 20.0% |
| !! | AATGTTGGAGATAAAATAAT+CGG | - | chr7.2:4299889-4299908 | None:intergenic | 20.0% |
| !! | AGAACAAAATGATATGATAT+TGG | - | chr7.2:4301018-4301037 | None:intergenic | 20.0% |
| !! | ATTCATTAAAATTGTAGACA+AGG | + | chr7.2:4300090-4300109 | MS.gene22790:intron | 20.0% |
| !! | TATCCATTAATTTAATGATG+TGG | + | chr7.2:4298546-4298565 | MS.gene22790:intron | 20.0% |
| !! | TATTCGTAAAGAAATATATG+TGG | + | chr7.2:4298757-4298776 | MS.gene22790:intron | 20.0% |
| !!! | ATGTTAATTTTCGTTCAAAT+AGG | + | chr7.2:4301357-4301376 | MS.gene22790:intron | 20.0% |
| !!! | CATCATTAAATTAATGGATA+TGG | - | chr7.2:4298546-4298565 | None:intergenic | 20.0% |
| !!! | GGCATATATTCAATTTTTAT+AGG | - | chr7.2:4300518-4300537 | None:intergenic | 20.0% |
| !!! | TGAGTTTTTATCTAAAGTTT+TGG | + | chr7.2:4299319-4299338 | MS.gene22790:intron | 20.0% |
| ! | AAAAACAGAATGAACAAAAC+AGG | - | chr7.2:4300123-4300142 | None:intergenic | 25.0% |
| ! | AAAATTGAATATATGCCTCA+AGG | + | chr7.2:4300521-4300540 | MS.gene22790:intron | 25.0% |
| ! | AAACTTGTAAGATTGAAGTT+AGG | + | chr7.2:4299949-4299968 | MS.gene22790:CDS | 25.0% |
| ! | ACTAATTACTGATAATAAGC+CGG | - | chr7.2:4299253-4299272 | None:intergenic | 25.0% |
| ! | ATATGTGGTAATAATGCTTA+TGG | + | chr7.2:4298772-4298791 | MS.gene22790:intron | 25.0% |
| ! | GATTGAAAAATTTATAGCCA+CGG | + | chr7.2:4300609-4300628 | MS.gene22790:intron | 25.0% |
| ! | GTCTTGTATAAAATTGATGA+TGG | + | chr7.2:4299861-4299880 | MS.gene22790:intron | 25.0% |
| ! | TATTGACATCTTACATCATT+AGG | + | chr7.2:4298935-4298954 | MS.gene22790:intron | 25.0% |
| ! | TGCAATCAATGTTATGTATT+AGG | + | chr7.2:4301425-4301444 | MS.gene22790:intron | 25.0% |
| ! | TTGCCACATCATTAAATTAA+TGG | - | chr7.2:4298552-4298571 | None:intergenic | 25.0% |
| ! | TTGGTTTAAGCAAATGTATT+GGG | + | chr7.2:4299553-4299572 | MS.gene22790:CDS | 25.0% |
| ! | TTTGACTAAAGATTTGCAAT+TGG | - | chr7.2:4299532-4299551 | None:intergenic | 25.0% |
| !! | AGCGTCTATTTATATTTTGT+AGG | + | chr7.2:4301327-4301346 | MS.gene22790:intron | 25.0% |
| !! | GTAAAGTAGTTTTTGCATTT+CGG | + | chr7.2:4298665-4298684 | MS.gene22790:intron | 25.0% |
| !! | TCATCAATTTTATACAAGAC+TGG | - | chr7.2:4299861-4299880 | None:intergenic | 25.0% |
| !! | TTTGAAATAACATGTAAAGC+TGG | + | chr7.2:4300884-4300903 | MS.gene22790:intron | 25.0% |
| !! | TTTTATAGGATGATGATTGT+TGG | - | chr7.2:4300504-4300523 | None:intergenic | 25.0% |
| !!! | TCTTTCTTTCGTTTTTCTTT+TGG | - | chr7.2:4300947-4300966 | None:intergenic | 25.0% |
| !!! | TGGCTATAAATTTTTCAATC+AGG | - | chr7.2:4300609-4300628 | None:intergenic | 25.0% |
| AAACATATCAGACATAGGAT+TGG | + | chr7.2:4299981-4300000 | MS.gene22790:CDS | 30.0% | |
| AAGCGTATTGTCATTGAAAT+AGG | - | chr7.2:4298831-4298850 | None:intergenic | 30.0% | |
| AAGTGAGTAAGAATTCAATC+CGG | - | chr7.2:4297980-4297999 | None:intergenic | 30.0% | |
| ACTGGTATCTGATATACTTA+CGG | - | chr7.2:4299843-4299862 | None:intergenic | 30.0% | |
| CATTAAAATTGTAGACAAGG+TGG | + | chr7.2:4300093-4300112 | MS.gene22790:intron | 30.0% | |
| CTTAGAAAGTAACAAATCCA+AGG | - | chr7.2:4300563-4300582 | None:intergenic | 30.0% | |
| CTTGGTTTAAGCAAATGTAT+TGG | + | chr7.2:4299552-4299571 | MS.gene22790:CDS | 30.0% | |
| GATAGTATTACAGTGTACTT+GGG | - | chr7.2:4298698-4298717 | None:intergenic | 30.0% | |
| GGCTTATTATCAGTAATTAG+TGG | + | chr7.2:4299252-4299271 | MS.gene22790:CDS | 30.0% | |
| GTCTAAAAAAATGTCACCTT+TGG | + | chr7.2:4298624-4298643 | MS.gene22790:intron | 30.0% | |
| GTTTAGGAGTTACTGATATT+GGG | + | chr7.2:4298291-4298310 | MS.gene22790:CDS | 30.0% | |
| TAAAGTTCAATTACCGATAG+AGG | - | chr7.2:4300047-4300066 | None:intergenic | 30.0% | |
| TAATCCTATTGCAATATGCT+AGG | - | chr7.2:4300228-4300247 | None:intergenic | 30.0% | |
| TAATTGAACTTTAGTCAACG+TGG | + | chr7.2:4300054-4300073 | MS.gene22790:intron | 30.0% | |
| TATAGACTAATACTGTTCCT+CGG | + | chr7.2:4299387-4299406 | MS.gene22790:intron | 30.0% | |
| TATTCTTGCATTCTCATAGA+AGG | + | chr7.2:4301137-4301156 | MS.gene22790:intron | 30.0% | |
| TATTGATCGTAAAGATTCGT+TGG | - | chr7.2:4298964-4298983 | None:intergenic | 30.0% | |
| TGATAGTATTACAGTGTACT+TGG | - | chr7.2:4298699-4298718 | None:intergenic | 30.0% | |
| TGCAAATCTTTAGTCAAACT+TGG | + | chr7.2:4299534-4299553 | MS.gene22790:CDS | 30.0% | |
| TGGTTTAAGCAAATGTATTG+GGG | + | chr7.2:4299554-4299573 | MS.gene22790:CDS | 30.0% | |
| TGTTTAGGAGTTACTGATAT+TGG | + | chr7.2:4298290-4298309 | MS.gene22790:CDS | 30.0% | |
| TTAATAAAGTTTGACCAAGG+TGG | + | chr7.2:4299128-4299147 | MS.gene22790:intron | 30.0% | |
| TTAGATAAAAACTCACTGAG+AGG | - | chr7.2:4299314-4299333 | None:intergenic | 30.0% | |
| TTGAGCGTAATTAGAATTGA+CGG | + | chr7.2:4299468-4299487 | MS.gene22790:CDS | 30.0% | |
| TTGATAAACCAAACTGGAAA+CGG | + | chr7.2:4301261-4301280 | MS.gene22790:intron | 30.0% | |
| TTTGTATGAACTATGCACTA+TGG | + | chr7.2:4298469-4298488 | MS.gene22790:intron | 30.0% | |
| ! | AAAGCTCGAAGTTTTCATTA+TGG | + | chr7.2:4298995-4299014 | MS.gene22790:CDS | 30.0% |
| ! | GGACATACTTTTCTTTTAGA+AGG | - | chr7.2:4300483-4300502 | None:intergenic | 30.0% |
| ! | TTGCGAAAAACTTGATGATA+CGG | + | chr7.2:4300387-4300406 | MS.gene22790:CDS | 30.0% |
| ! | TTGTTCTTTTAATGTGTTGC+AGG | + | chr7.2:4299191-4299210 | MS.gene22790:intron | 30.0% |
| ! | TTTTACATTATCACCTTGCT+CGG | + | chr7.2:4298856-4298875 | MS.gene22790:intron | 30.0% |
| !! | CTTGGATTTGTTACTTTCTA+AGG | + | chr7.2:4300561-4300580 | MS.gene22790:intron | 30.0% |
| AACTTGATCCAATCTGATAC+AGG | - | chr7.2:4299746-4299765 | None:intergenic | 35.0% | |
| AAGCACCACCTTAGATTATT+CGG | - | chr7.2:4301184-4301203 | None:intergenic | 35.0% | |
| ACACTCTTGATAAACCAAAC+TGG | + | chr7.2:4301255-4301274 | MS.gene22790:intron | 35.0% | |
| ACATTTGCACAACTATTGAC+TGG | + | chr7.2:4300989-4301008 | MS.gene22790:intron | 35.0% | |
| AGTGTCAATTATGTTCCTTG+AGG | - | chr7.2:4300539-4300558 | None:intergenic | 35.0% | |
| AGTTAAACTTGTGACAGCAA+AGG | - | chr7.2:4300778-4300797 | None:intergenic | 35.0% | |
| ATAGACTAATACTGTTCCTC+GGG | + | chr7.2:4299388-4299407 | MS.gene22790:intron | 35.0% | |
| ATTACTGATAATAAGCCGGA+TGG | - | chr7.2:4299249-4299268 | None:intergenic | 35.0% | |
| CACTTCTAGTCAAAAACCAA+AGG | - | chr7.2:4298643-4298662 | None:intergenic | 35.0% | |
| CTTGTTAATGTCACCATACA+AGG | + | chr7.2:4301577-4301596 | MS.gene22790:CDS | 35.0% | |
| GAACATAATTGACACTACCT+TGG | + | chr7.2:4300543-4300562 | MS.gene22790:intron | 35.0% | |
| GAGAATGCAAGAATAAGAGT+TGG | - | chr7.2:4301132-4301151 | None:intergenic | 35.0% | |
| GGTACATTTAAATACAGACG+AGG | - | chr7.2:4300692-4300711 | None:intergenic | 35.0% | |
| GTTTGGAGATTTCTGATCTT+GGG | + | chr7.2:4298369-4298388 | MS.gene22790:CDS | 35.0% | |
| TAATGTCACCATACAAGGAT+TGG | + | chr7.2:4301582-4301601 | MS.gene22790:CDS | 35.0% | |
| TATAAAAGCCGTTTCCAGTT+TGG | - | chr7.2:4301272-4301291 | None:intergenic | 35.0% | |
| TCAACCTAGCATATTGCAAT+AGG | + | chr7.2:4300221-4300240 | MS.gene22790:CDS | 35.0% | |
| TGAGTAACAAACCTTGAGAT+AGG | - | chr7.2:4298444-4298463 | None:intergenic | 35.0% | |
| TGCACAAACATATCAGACAT+AGG | + | chr7.2:4299976-4299995 | MS.gene22790:CDS | 35.0% | |
| TGGAGAAGTTGAGTTTGAAA+TGG | + | chr7.2:4298345-4298364 | MS.gene22790:CDS | 35.0% | |
| TGGATATGGATATGACAATG+TGG | - | chr7.2:4298532-4298551 | None:intergenic | 35.0% | |
| TGTGATATGGTTACTGAGAT+TGG | + | chr7.2:4299720-4299739 | MS.gene22790:CDS | 35.0% | |
| TGTTTGGAGATTTCTGATCT+TGG | + | chr7.2:4298368-4298387 | MS.gene22790:CDS | 35.0% | |
| TTACTGATAATAAGCCGGAT+GGG | - | chr7.2:4299248-4299267 | None:intergenic | 35.0% | |
| TTATTCACAAAACCTACTGC+AGG | + | chr7.2:4300429-4300448 | MS.gene22790:CDS | 35.0% | |
| TTGAAGTGTATCAGCAATCT+CGG | + | chr7.2:4300259-4300278 | MS.gene22790:CDS | 35.0% | |
| TTGCTTCACCGAATAATCTA+AGG | + | chr7.2:4301173-4301192 | MS.gene22790:intron | 35.0% | |
| TTGTTGTGGTCGGATTAAAA+AGG | + | chr7.2:4301621-4301640 | MS.gene22790:CDS | 35.0% | |
| ! | ACTGGAAACGGCTTTTATAT+TGG | + | chr7.2:4301273-4301292 | MS.gene22790:intron | 35.0% |
| ! | ATCAGTAATTAGTGGACATG+AGG | + | chr7.2:4299260-4299279 | MS.gene22790:CDS | 35.0% |
| ! | ATGCTATTTAGTGGATGATG+TGG | + | chr7.2:4299022-4299041 | MS.gene22790:CDS | 35.0% |
| ! | CTCGAAGTTTTCATTATGGT+GGG | + | chr7.2:4298999-4299018 | MS.gene22790:CDS | 35.0% |
| ! | GAAGTTAGAGTCTTGTGATA+TGG | + | chr7.2:4299707-4299726 | MS.gene22790:CDS | 35.0% |
| ! | GATTGTTTCGAGTATTTCTG+AGG | - | chr7.2:4301680-4301699 | None:intergenic | 35.0% |
| ! | GTTGAGTTTGAAATGGTGTT+TGG | + | chr7.2:4298352-4298371 | MS.gene22790:CDS | 35.0% |
| ! | TCAGTAATTAGTGGACATGA+GGG | + | chr7.2:4299261-4299280 | MS.gene22790:CDS | 35.0% |
| ! | TGCGAAAAACTTGATGATAC+GGG | + | chr7.2:4300388-4300407 | MS.gene22790:CDS | 35.0% |
| ! | TGCTATTTAGTGGATGATGT+GGG | + | chr7.2:4299023-4299042 | MS.gene22790:CDS | 35.0% |
| !! | AACTTGATGATACGGGTTTT+CGG | + | chr7.2:4300395-4300414 | MS.gene22790:CDS | 35.0% |
| !! | AGAGTTTGCTATAGTAGAGA+TGG | - | chr7.2:4299667-4299686 | None:intergenic | 35.0% |
| !! | CTGTGCTTTTATTTGTCTTC+AGG | - | chr7.2:4300817-4300836 | None:intergenic | 35.0% |
| !! | TAGAAAAGTACCTTGAGTAG+TGG | - | chr7.2:4299074-4299093 | None:intergenic | 35.0% |
| !! | TATCGACTTTACTGAACCAT+TGG | + | chr7.2:4298069-4298088 | MS.gene22790:CDS | 35.0% |
| AAAAGGATGTCCACTACTCA+AGG | + | chr7.2:4299061-4299080 | MS.gene22790:CDS | 40.0% | |
| AACTTCAGACTTGCAAGGTT+TGG | - | chr7.2:4299693-4299712 | None:intergenic | 40.0% | |
| ACCCAAACAAGACACAAACT+AGG | - | chr7.2:4300654-4300673 | None:intergenic | 40.0% | |
| ACTCTAACTTCAGACTTGCA+AGG | - | chr7.2:4299698-4299717 | None:intergenic | 40.0% | |
| AGCATGTTTATTACCGAGCA+AGG | - | chr7.2:4298872-4298891 | None:intergenic | 40.0% | |
| AGGAGTTACTGATATTGGGT+TGG | + | chr7.2:4298295-4298314 | MS.gene22790:CDS | 40.0% | |
| ATCACCAAAACCCCAACAAT+GGG | - | chr7.2:4298213-4298232 | None:intergenic | 40.0% | |
| ATGTACCACTTCTCTATGCA+TGG | + | chr7.2:4300705-4300724 | MS.gene22790:intron | 40.0% | |
| CCCAAACAAGACACAAACTA+GGG | - | chr7.2:4300653-4300672 | None:intergenic | 40.0% | |
| CCGACCACAACAAGATATAA+GGG | - | chr7.2:4301614-4301633 | None:intergenic | 40.0% | |
| CTTCACCGAATAATCTAAGG+TGG | + | chr7.2:4301176-4301195 | MS.gene22790:intron | 40.0% | |
| CTTGCCCTTATATCTTGTTG+TGG | + | chr7.2:4301607-4301626 | MS.gene22790:CDS | 40.0% | |
| CTTTCAAACATCACGAGCAT+TGG | + | chr7.2:4300310-4300329 | MS.gene22790:CDS | 40.0% | |
| GACTTTATCCTCCAGATCAT+CGG | + | chr7.2:4299504-4299523 | MS.gene22790:CDS | 40.0% | |
| GGGTTGCAGTTTCTTGAAAA+AGG | + | chr7.2:4299044-4299063 | MS.gene22790:CDS | 40.0% | |
| GTTGATGTTTCCCATTGTTG+GGG | + | chr7.2:4298200-4298219 | MS.gene22790:CDS | 40.0% | |
| TATCACCAAAACCCCAACAA+TGG | - | chr7.2:4298214-4298233 | None:intergenic | 40.0% | |
| TCATTGAAATAGGCTCCTGT+TGG | - | chr7.2:4298821-4298840 | None:intergenic | 40.0% | |
| TCCGACCACAACAAGATATA+AGG | - | chr7.2:4301615-4301634 | None:intergenic | 40.0% | |
| TCGAAACAATCCATGAACGA+GGG | + | chr7.2:4301689-4301708 | MS.gene22790:CDS | 40.0% | |
| TCTCGATGTTTCCTATCTCA+AGG | + | chr7.2:4298430-4298449 | MS.gene22790:CDS | 40.0% | |
| TCTTGCATTCTCATAGAAGG+TGG | + | chr7.2:4301140-4301159 | MS.gene22790:intron | 40.0% | |
| TGCAGGCAATTGATGTATCA+AGG | + | chr7.2:4299208-4299227 | MS.gene22790:intron | 40.0% | |
| TGTACCACTTCTCTATGCAT+GGG | + | chr7.2:4300706-4300725 | MS.gene22790:intron | 40.0% | |
| TGTTCTGGCGTAAATGACAT+AGG | + | chr7.2:4299798-4299817 | MS.gene22790:CDS | 40.0% | |
| TTACCGATAGAGGTCAAGTT+CGG | - | chr7.2:4300037-4300056 | None:intergenic | 40.0% | |
| TTGATACTGAGTCGAGTTAC+CGG | + | chr7.2:4298122-4298141 | MS.gene22790:CDS | 40.0% | |
| TTGATCTTTCCGTTTGTCCA+TGG | + | chr7.2:4298030-4298049 | MS.gene22790:CDS | 40.0% | |
| ! | AATTGACGGTGTTCGAGTTT+CGG | + | chr7.2:4299482-4299501 | MS.gene22790:CDS | 40.0% |
| ! | ACCCTAGTTTGTGTCTTGTT+TGG | + | chr7.2:4300649-4300668 | MS.gene22790:intron | 40.0% |
| ! | AGGTCAAGTTCGGTCAATTT+TGG | - | chr7.2:4300027-4300046 | None:intergenic | 40.0% |
| ! | CCCTTATATCTTGTTGTGGT+CGG | + | chr7.2:4301611-4301630 | MS.gene22790:CDS | 40.0% |
| ! | GATACACAAGTTTTGCATCC+TGG | - | chr7.2:4301558-4301577 | None:intergenic | 40.0% |
| ! | GCTATTTAGTGGATGATGTG+GGG | + | chr7.2:4299024-4299043 | MS.gene22790:CDS | 40.0% |
| ! | GCTCGAAGTTTTCATTATGG+TGG | + | chr7.2:4298998-4299017 | MS.gene22790:CDS | 40.0% |
| ! | GGTCAAGTTCGGTCAATTTT+GGG | - | chr7.2:4300026-4300045 | None:intergenic | 40.0% |
| ! | GGTTGATGTTTCCCATTGTT+GGG | + | chr7.2:4298199-4298218 | MS.gene22790:CDS | 40.0% |
| ! | TATGGTGGGATGCTATTTAG+TGG | + | chr7.2:4299013-4299032 | MS.gene22790:CDS | 40.0% |
| ! | TGGGTTGGAGATGTTGATTA+AGG | + | chr7.2:4298157-4298176 | MS.gene22790:CDS | 40.0% |
| !! | ACTTGATGATACGGGTTTTC+GGG | + | chr7.2:4300396-4300415 | MS.gene22790:CDS | 40.0% |
| !! | CCCTAGTTTGTGTCTTGTTT+GGG | + | chr7.2:4300650-4300669 | MS.gene22790:intron | 40.0% |
| !!! | TCTCTGATTTTGAGTTGCGT+GGG | + | chr7.2:4300287-4300306 | MS.gene22790:CDS | 40.0% |
| AAACTAGGGTTCTTCGCCTT+TGG | - | chr7.2:4300639-4300658 | None:intergenic | 45.0% | |
| AATTGCAGCTGTGTACGCAT+AGG | + | chr7.2:4300148-4300167 | MS.gene22790:intron | 45.0% | |
| ACATCAACCGCTTCCAACAA+CGG | - | chr7.2:4298188-4298207 | None:intergenic | 45.0% | |
| ACGTGTCAGATCATGTGTTG+TGG | + | chr7.2:4301506-4301525 | MS.gene22790:CDS | 45.0% | |
| ACTACACCCAACAGCAATCT+TGG | - | chr7.2:4298321-4298340 | None:intergenic | 45.0% | |
| ATCCTCGATCCATGGACAAA+CGG | - | chr7.2:4298042-4298061 | None:intergenic | 45.0% | |
| ATGTATTGGGGTGACCAACT+TGG | + | chr7.2:4299566-4299585 | MS.gene22790:CDS | 45.0% | |
| CAAACTCCACAAAACCACCT+TGG | - | chr7.2:4299145-4299164 | None:intergenic | 45.0% | |
| CAACAACCCGGAAAACCATT+CGG | + | chr7.2:4297949-4297968 | MS.gene22790:CDS | 45.0% | |
| CTCGAAACAATCCATGAACG+AGG | + | chr7.2:4301688-4301707 | MS.gene22790:CDS | 45.0% | |
| CTGTTGGCAAGCGATAAGAA+CGG | - | chr7.2:4298805-4298824 | None:intergenic | 45.0% | |
| CTTTCAGCACCTCTCACTAA+CGG | + | chr7.2:4299426-4299445 | MS.gene22790:CDS | 45.0% | |
| GATTAAGGCTTGTCCGTTGT+TGG | + | chr7.2:4298172-4298191 | MS.gene22790:CDS | 45.0% | |
| GCAATAGGATTACAGACGCA+GGG | + | chr7.2:4300236-4300255 | MS.gene22790:CDS | 45.0% | |
| GGAAAACCATTCGGATTCTC+CGG | + | chr7.2:4297958-4297977 | MS.gene22790:CDS | 45.0% | |
| GTGTACGCATAGGAGATGAT+GGG | + | chr7.2:4300158-4300177 | MS.gene22790:CDS | 45.0% | |
| TACCTGCATAATCCCCAAGT+TGG | - | chr7.2:4299583-4299602 | None:intergenic | 45.0% | |
| TGAACCATTGGTCATCGAGT+TGG | + | chr7.2:4298081-4298100 | MS.gene22790:CDS | 45.0% | |
| TGACCGAACTTGACCTCTAT+CGG | + | chr7.2:4300031-4300050 | MS.gene22790:CDS | 45.0% | |
| TGATACTGAGTCGAGTTACC+GGG | + | chr7.2:4298123-4298142 | MS.gene22790:CDS | 45.0% | |
| TGCAATAGGATTACAGACGC+AGG | + | chr7.2:4300235-4300254 | MS.gene22790:CDS | 45.0% | |
| TGCAGTCAGTTGCAAGAGAT+TGG | + | chr7.2:4300345-4300364 | MS.gene22790:CDS | 45.0% | |
| TGCTGTTGGGTGTAGTAAGT+TGG | + | chr7.2:4298325-4298344 | MS.gene22790:CDS | 45.0% | |
| TGTATTGGGGTGACCAACTT+GGG | + | chr7.2:4299567-4299586 | MS.gene22790:CDS | 45.0% | |
| TGTGTACGCATAGGAGATGA+TGG | + | chr7.2:4300157-4300176 | MS.gene22790:CDS | 45.0% | |
| TTACGCCAGAACAGTCAGTA+AGG | - | chr7.2:4299791-4299810 | None:intergenic | 45.0% | |
| TTATAGCCACGGTCTTCCAA+AGG | + | chr7.2:4300620-4300639 | MS.gene22790:intron | 45.0% | |
| TTCAATCCGGAGAATCCGAA+TGG | - | chr7.2:4297967-4297986 | None:intergenic | 45.0% | |
| TTCTTCAAGCCGTTAGTGAG+AGG | - | chr7.2:4299438-4299457 | None:intergenic | 45.0% | |
| TTGGGGATTATGCAGGTAGT+AGG | + | chr7.2:4299585-4299604 | MS.gene22790:CDS | 45.0% | |
| ! | ACACAAGTTTTGCATCCTGG+AGG | - | chr7.2:4301555-4301574 | None:intergenic | 45.0% |
| ! | CGGTTGATGTTTCCCATTGT+TGG | + | chr7.2:4298198-4298217 | MS.gene22790:CDS | 45.0% |
| ! | CTTGACCTTACTGACTGTTC+TGG | + | chr7.2:4299783-4299802 | MS.gene22790:CDS | 45.0% |
| ! | GAGAATCCGAATGGTTTTCC+GGG | - | chr7.2:4297958-4297977 | None:intergenic | 45.0% |
| ! | GCAATATGCTAGGTTGAGCA+TGG | - | chr7.2:4300218-4300237 | None:intergenic | 45.0% |
| ! | GGAGAATCCGAATGGTTTTC+CGG | - | chr7.2:4297959-4297978 | None:intergenic | 45.0% |
| ! | GTTTCCCATTGTTGGGGTTT+TGG | + | chr7.2:4298206-4298225 | MS.gene22790:CDS | 45.0% |
| !! | GAGATTGGCCTGTATCAGAT+TGG | + | chr7.2:4299735-4299754 | MS.gene22790:CDS | 45.0% |
| !! | GTTTGACCAAGGTGGTTTTG+TGG | + | chr7.2:4299136-4299155 | MS.gene22790:intron | 45.0% |
| !! | TTGGGGTTTTGGTGATAGAG+AGG | + | chr7.2:4298217-4298236 | MS.gene22790:CDS | 45.0% |
| !!! | CTCTCTGATTTTGAGTTGCG+TGG | + | chr7.2:4300286-4300305 | MS.gene22790:CDS | 45.0% |
| AATTGGAGCCGATGATCTGG+AGG | - | chr7.2:4299515-4299534 | None:intergenic | 50.0% | |
| CAAAACCTACTGCAGGTCAG+TGG | + | chr7.2:4300436-4300455 | MS.gene22790:intron | 50.0% | |
| CACAACCGGATGCAACAAGT+TGG | + | chr7.2:4300192-4300211 | MS.gene22790:CDS | 50.0% | |
| CGAACCCATGCATAGAGAAG+TGG | - | chr7.2:4300713-4300732 | None:intergenic | 50.0% | |
| CGTTCTTATCGCTTGCCAAC+AGG | + | chr7.2:4298803-4298822 | MS.gene22790:intron | 50.0% | |
| GACCAACTTGGGGATTATGC+AGG | + | chr7.2:4299578-4299597 | MS.gene22790:CDS | 50.0% | |
| GAGTCCAACTCGATGACCAA+TGG | - | chr7.2:4298088-4298107 | None:intergenic | 50.0% | |
| GCTGCACGAAGACAGAATGT+TGG | - | chr7.2:4299904-4299923 | None:intergenic | 50.0% | |
| GGCAAGCTCCAATCCTTGTA+TGG | - | chr7.2:4301593-4301612 | None:intergenic | 50.0% | |
| GGTCTTGAGCAGATCAATGC+AGG | + | chr7.2:4299282-4299301 | MS.gene22790:CDS | 50.0% | |
| GTATTGGGGTGACCAACTTG+GGG | + | chr7.2:4299568-4299587 | MS.gene22790:CDS | 50.0% | |
| GTGCAAGGTCAGATGGGATT+AGG | + | chr7.2:4301711-4301730 | MS.gene22790:CDS | 50.0% | |
| GTTTGTCCATGGATCGAGGA+TGG | + | chr7.2:4298041-4298060 | MS.gene22790:CDS | 50.0% | |
| TGAGTCGAGTTACCGGGTTA+GGG | + | chr7.2:4298129-4298148 | MS.gene22790:CDS | 50.0% | |
| TGATACCACTGACCTGCAGT+AGG | - | chr7.2:4300444-4300463 | None:intergenic | 50.0% | |
| TGCAATTGGAGCCGATGATC+TGG | - | chr7.2:4299518-4299537 | None:intergenic | 50.0% | |
| TGTAACTGCGTTAGCCCATC+CGG | + | chr7.2:4299231-4299250 | MS.gene22790:CDS | 50.0% | |
| TTCCGTTTGTCCATGGATCG+AGG | + | chr7.2:4298037-4298056 | MS.gene22790:CDS | 50.0% | |
| ! | AATCCATGAACGAGGGTGCA+AGG | + | chr7.2:4301696-4301715 | MS.gene22790:CDS | 50.0% |
| ! | GGTTGGCCAAGATTGCTGTT+GGG | + | chr7.2:4298312-4298331 | MS.gene22790:CDS | 50.0% |
| ! | GTTCCTCGGGCATTTTCTGA+AGG | + | chr7.2:4299401-4299420 | MS.gene22790:intron | 50.0% |
| ! | TTACCGGGTTAGGGTACGTT+GGG | + | chr7.2:4298138-4298157 | MS.gene22790:CDS | 50.0% |
| !! | CATGGCCAACTTGTTGCATC+CGG | - | chr7.2:4300200-4300219 | None:intergenic | 50.0% |
| !! | TGGTCATCGAGTTGGACTCT+GGG | + | chr7.2:4298089-4298108 | MS.gene22790:CDS | 50.0% |
| !! | TTGGTCATCGAGTTGGACTC+TGG | + | chr7.2:4298088-4298107 | MS.gene22790:CDS | 50.0% |
| ACTGCTCCATCCTCGATCCA+TGG | - | chr7.2:4298050-4298069 | None:intergenic | 55.0% | |
| ATCGTGCGGTGGGAAGTTGA+AGG | + | chr7.2:4298250-4298269 | MS.gene22790:CDS | 55.0% | |
| CAACCCAACGTACCCTAACC+CGG | - | chr7.2:4298144-4298163 | None:intergenic | 55.0% | |
| CTGAGTCGAGTTACCGGGTT+AGG | + | chr7.2:4298128-4298147 | MS.gene22790:CDS | 55.0% | |
| GCTCCTTCAGAAAATGCCCG+AGG | - | chr7.2:4299407-4299426 | None:intergenic | 55.0% | |
| GGCTTGTCCGTTGTTGGAAG+CGG | + | chr7.2:4298178-4298197 | MS.gene22790:CDS | 55.0% | |
| TCCGGGTCGAATCAACAACC+CGG | + | chr7.2:4297937-4297956 | MS.gene22790:CDS | 55.0% | |
| TGACCTTGCACCCTCGTTCA+TGG | - | chr7.2:4301702-4301721 | None:intergenic | 55.0% | |
| ! | AACGAGGGTGCAAGGTCAGA+TGG | + | chr7.2:4301704-4301723 | MS.gene22790:CDS | 55.0% |
| ! | ACGAGGGTGCAAGGTCAGAT+GGG | + | chr7.2:4301705-4301724 | MS.gene22790:CDS | 55.0% |
| ! | GTTACCGGGTTAGGGTACGT+TGG | + | chr7.2:4298137-4298156 | MS.gene22790:CDS | 55.0% |
| ! | TCTTCGCCTTTGGAAGACCG+TGG | - | chr7.2:4300629-4300648 | None:intergenic | 55.0% |
| !! | GGGTTGGCCAAGATTGCTGT+TGG | + | chr7.2:4298311-4298330 | MS.gene22790:CDS | 55.0% |
| !! | TCCGGGTTGTTGATTCGACC+CGG | - | chr7.2:4297941-4297960 | None:intergenic | 55.0% |
| CTGCTGCGTTATCGTGCGGT+GGG | + | chr7.2:4298240-4298259 | MS.gene22790:CDS | 60.0% | |
| GAGGCTGCTGCGTTATCGTG+CGG | + | chr7.2:4298236-4298255 | MS.gene22790:CDS | 60.0% | |
| ! | CGGGTTAGGGTACGTTGGGT+TGG | + | chr7.2:4298142-4298161 | MS.gene22790:CDS | 60.0% |
| ! | GAGTAACCTGAAGCGCCTCC+AGG | + | chr7.2:4301537-4301556 | MS.gene22790:CDS | 60.0% |
| ! | GGGCTAGCAGCACTCACAAC+CGG | + | chr7.2:4300178-4300197 | MS.gene22790:CDS | 60.0% |
| !! | TTGCATCCTGGAGGCGCTTC+AGG | - | chr7.2:4301546-4301565 | None:intergenic | 60.0% |
| GCTGCTGCGTTATCGTGCGG+TGG | + | chr7.2:4298239-4298258 | MS.gene22790:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 4297930 | 4301732 | 4297930 | ID=MS.gene22790 |
| chr7.2 | mRNA | 4297930 | 4301732 | 4297930 | ID=MS.gene22790.t1;Parent=MS.gene22790 |
| chr7.2 | exon | 4297930 | 4298451 | 4297930 | ID=MS.gene22790.t1.exon1;Parent=MS.gene22790.t1 |
| chr7.2 | CDS | 4297930 | 4298451 | 4297930 | ID=cds.MS.gene22790.t1;Parent=MS.gene22790.t1 |
| chr7.2 | exon | 4298957 | 4299082 | 4298957 | ID=MS.gene22790.t1.exon2;Parent=MS.gene22790.t1 |
| chr7.2 | CDS | 4298957 | 4299082 | 4298957 | ID=cds.MS.gene22790.t1;Parent=MS.gene22790.t1 |
| chr7.2 | exon | 4299213 | 4299317 | 4299213 | ID=MS.gene22790.t1.exon3;Parent=MS.gene22790.t1 |
| chr7.2 | CDS | 4299213 | 4299317 | 4299213 | ID=cds.MS.gene22790.t1;Parent=MS.gene22790.t1 |
| chr7.2 | exon | 4299423 | 4299819 | 4299423 | ID=MS.gene22790.t1.exon4;Parent=MS.gene22790.t1 |
| chr7.2 | CDS | 4299423 | 4299819 | 4299423 | ID=cds.MS.gene22790.t1;Parent=MS.gene22790.t1 |
| chr7.2 | exon | 4299923 | 4300052 | 4299923 | ID=MS.gene22790.t1.exon5;Parent=MS.gene22790.t1 |
| chr7.2 | CDS | 4299923 | 4300052 | 4299923 | ID=cds.MS.gene22790.t1;Parent=MS.gene22790.t1 |
| chr7.2 | exon | 4300156 | 4300450 | 4300156 | ID=MS.gene22790.t1.exon6;Parent=MS.gene22790.t1 |
| chr7.2 | CDS | 4300156 | 4300450 | 4300156 | ID=cds.MS.gene22790.t1;Parent=MS.gene22790.t1 |
| chr7.2 | exon | 4301487 | 4301732 | 4301487 | ID=MS.gene22790.t1.exon7;Parent=MS.gene22790.t1 |
| chr7.2 | CDS | 4301487 | 4301732 | 4301487 | ID=cds.MS.gene22790.t1;Parent=MS.gene22790.t1 |
| Gene Sequence |
| Protein sequence |
