Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23573.t1 | XP_013445033.1 | 86.7 | 399 | 20 | 4 | 1 | 374 | 1 | 391 | 1.90E-181 | 645.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23573.t1 | Q66GR3 | 36.7 | 368 | 166 | 11 | 40 | 371 | 15 | 351 | 4.0e-39 | 163.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23573.t1 | A0A072TQD6 | 86.7 | 399 | 20 | 4 | 1 | 374 | 1 | 391 | 1.3e-181 | 645.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene23573.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene23573 | -0.815438 | 9.25E-52 | -1.69E-46 |
| MS.gene049483 | MS.gene23573 | 0.813738 | 2.20E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene23573 | 0.810785 | 9.70E-51 | -1.69E-46 |
| MS.gene049634 | MS.gene23573 | 0.802173 | 6.36E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene23573 | -0.803577 | 3.26E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene23573 | -0.810448 | 1.15E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene23573 | 0.853229 | 2.74E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene23573 | -0.810968 | 8.85E-51 | -1.69E-46 |
| MS.gene050502 | MS.gene23573 | -0.803245 | 3.82E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene23573 | -0.827399 | 1.60E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene23573 | -0.828597 | 8.23E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene23573 | -0.804578 | 2.02E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene23573 | -0.831884 | 1.30E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene23573 | -0.835088 | 2.06E-56 | -1.69E-46 |
| MS.gene050883 | MS.gene23573 | 0.828104 | 1.08E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene23573 | -0.818305 | 2.10E-52 | -1.69E-46 |
| MS.gene051127 | MS.gene23573 | 0.867674 | 1.15E-65 | -1.69E-46 |
| MS.gene051138 | MS.gene23573 | 0.835838 | 1.33E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene23573 | -0.815004 | 1.15E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene23573 | -0.820612 | 6.26E-53 | -1.69E-46 |
| MS.gene051946 | MS.gene23573 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene23573 | 0.807275 | 5.47E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene23573 | 0.857521 | 1.54E-62 | -1.69E-46 |
| MS.gene053488 | MS.gene23573 | 0.811462 | 6.92E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene23573 | -0.811068 | 8.42E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene23573 | 0.802502 | 5.44E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene23573 | 0.844945 | 5.52E-59 | -1.69E-46 |
| MS.gene055139 | MS.gene23573 | 0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene23573 | 0.837238 | 5.85E-57 | -1.69E-46 |
| MS.gene055202 | MS.gene23573 | 0.849584 | 2.94E-60 | -1.69E-46 |
| MS.gene055240 | MS.gene23573 | 0.806045 | 9.95E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene23573 | -0.835668 | 1.47E-56 | -1.69E-46 |
| MS.gene055959 | MS.gene23573 | 0.810219 | 1.29E-50 | -1.69E-46 |
| MS.gene056224 | MS.gene23573 | 0.808209 | 3.47E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene23573 | 0.816496 | 5.37E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene23573 | 0.823167 | 1.60E-53 | -1.69E-46 |
| MS.gene056311 | MS.gene23573 | 0.808627 | 2.82E-50 | -1.69E-46 |
| MS.gene056313 | MS.gene23573 | 0.818956 | 1.49E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene23573 | -0.849331 | 3.46E-60 | -1.69E-46 |
| MS.gene056856 | MS.gene23573 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene23573 | 0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene23573 | -0.812626 | 3.86E-51 | -1.69E-46 |
| MS.gene057550 | MS.gene23573 | 0.810502 | 1.12E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene23573 | 0.80502 | 1.63E-49 | -1.69E-46 |
| MS.gene058093 | MS.gene23573 | 0.81354 | 2.43E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene23573 | 0.836313 | 1.01E-56 | -1.69E-46 |
| MS.gene058108 | MS.gene23573 | 0.840151 | 1.03E-57 | -1.69E-46 |
| MS.gene058109 | MS.gene23573 | 0.851295 | 9.74E-61 | -1.69E-46 |
| MS.gene058111 | MS.gene23573 | 0.81758 | 3.06E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene23573 | 0.885128 | 1.06E-71 | -1.69E-46 |
| MS.gene058173 | MS.gene23573 | 0.877332 | 6.84E-69 | -1.69E-46 |
| MS.gene058175 | MS.gene23573 | 0.884131 | 2.49E-71 | -1.69E-46 |
| MS.gene058493 | MS.gene23573 | 0.804257 | 2.36E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene23573 | 0.801277 | 9.72E-49 | -1.69E-46 |
| MS.gene058978 | MS.gene23573 | 0.819088 | 1.40E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene23573 | -0.814434 | 1.54E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene23573 | 0.838896 | 2.19E-57 | -1.69E-46 |
| MS.gene059038 | MS.gene23573 | 0.804008 | 2.66E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene23573 | 0.868525 | 6.12E-66 | -1.69E-46 |
| MS.gene059223 | MS.gene23573 | 0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene23573 | -0.820797 | 5.67E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene23573 | -0.85265 | 4.02E-61 | -1.69E-46 |
| MS.gene059916 | MS.gene23573 | 0.808791 | 2.60E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene23573 | 0.807634 | 4.59E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene23573 | -0.808 | 3.84E-50 | -1.69E-46 |
| MS.gene060593 | MS.gene23573 | 0.815827 | 7.57E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene23573 | 0.831624 | 1.50E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene23573 | -0.850026 | 2.22E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene23573 | -0.825086 | 5.68E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene23573 | -0.821197 | 4.59E-53 | -1.69E-46 |
| MS.gene061157 | MS.gene23573 | 0.80775 | 4.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23573.t1 | MTR_8g036235 | 86.717 | 399 | 20 | 4 | 1 | 374 | 1 | 391 | 0.0 | 668 |
| MS.gene23573.t1 | MTR_8g036235 | 85.912 | 362 | 18 | 4 | 1 | 337 | 1 | 354 | 0.0 | 596 |
| MS.gene23573.t1 | MTR_3g028520 | 51.574 | 413 | 117 | 15 | 18 | 373 | 10 | 396 | 1.19e-113 | 337 |
| MS.gene23573.t1 | MTR_3g027650 | 51.574 | 413 | 117 | 15 | 18 | 373 | 10 | 396 | 1.19e-113 | 337 |
| MS.gene23573.t1 | MTR_3g027650 | 51.122 | 401 | 113 | 15 | 18 | 361 | 10 | 384 | 6.08e-108 | 322 |
| MS.gene23573.t1 | MTR_3g027650 | 49.868 | 379 | 103 | 16 | 18 | 337 | 10 | 360 | 3.11e-94 | 286 |
| MS.gene23573.t1 | MTR_1g052470 | 38.338 | 373 | 191 | 10 | 28 | 371 | 8 | 370 | 1.89e-57 | 192 |
| MS.gene23573.t1 | MTR_2g098310 | 34.963 | 409 | 185 | 12 | 32 | 371 | 8 | 404 | 7.70e-51 | 175 |
| MS.gene23573.t1 | MTR_4g065870 | 41.065 | 263 | 120 | 10 | 130 | 372 | 181 | 428 | 6.58e-49 | 171 |
| MS.gene23573.t1 | MTR_2g098310 | 34.491 | 403 | 179 | 13 | 32 | 363 | 8 | 396 | 2.72e-47 | 166 |
| MS.gene23573.t1 | MTR_2g098310 | 32.287 | 446 | 182 | 14 | 32 | 371 | 8 | 439 | 1.06e-43 | 157 |
| MS.gene23573.t1 | MTR_4g065870 | 41.036 | 251 | 113 | 10 | 130 | 360 | 181 | 416 | 2.28e-43 | 155 |
| MS.gene23573.t1 | MTR_7g092540 | 33.978 | 362 | 180 | 7 | 22 | 371 | 1 | 315 | 2.09e-41 | 148 |
| MS.gene23573.t1 | MTR_7g092540 | 38.776 | 245 | 108 | 4 | 130 | 362 | 92 | 306 | 4.28e-38 | 139 |
| MS.gene23573.t1 | MTR_4g033295 | 67.045 | 88 | 27 | 1 | 285 | 372 | 106 | 191 | 4.10e-34 | 125 |
| MS.gene23573.t1 | MTR_2g098310 | 33.067 | 375 | 170 | 13 | 32 | 337 | 8 | 370 | 6.95e-34 | 130 |
| MS.gene23573.t1 | MTR_1g116790 | 51.562 | 128 | 43 | 3 | 246 | 371 | 227 | 337 | 5.67e-32 | 123 |
| MS.gene23573.t1 | MTR_4g065870 | 38.596 | 228 | 105 | 10 | 130 | 337 | 181 | 393 | 1.39e-31 | 124 |
| MS.gene23573.t1 | MTR_4g033295 | 69.231 | 78 | 22 | 1 | 285 | 362 | 106 | 181 | 1.58e-30 | 115 |
| MS.gene23573.t1 | MTR_1g052470 | 34.700 | 317 | 168 | 10 | 28 | 315 | 8 | 314 | 6.45e-30 | 117 |
| MS.gene23573.t1 | MTR_2g098310 | 30.141 | 355 | 163 | 12 | 32 | 315 | 8 | 348 | 6.32e-23 | 99.0 |
| MS.gene23573.t1 | MTR_4g033295 | 75.472 | 53 | 11 | 1 | 285 | 337 | 106 | 156 | 3.31e-19 | 84.7 |
| MS.gene23573.t1 | MTR_6g052280 | 52.500 | 80 | 38 | 0 | 258 | 337 | 13 | 92 | 4.66e-18 | 80.1 |
| MS.gene23573.t1 | MTR_4g131160 | 55.072 | 69 | 30 | 1 | 298 | 366 | 195 | 262 | 1.01e-16 | 81.3 |
| MS.gene23573.t1 | MTR_4g131160 | 55.072 | 69 | 30 | 1 | 298 | 366 | 198 | 265 | 1.06e-16 | 81.3 |
| MS.gene23573.t1 | MTR_1g080890 | 53.623 | 69 | 31 | 1 | 298 | 366 | 192 | 259 | 5.08e-15 | 75.9 |
| MS.gene23573.t1 | MTR_3g116770 | 46.753 | 77 | 41 | 0 | 287 | 363 | 179 | 255 | 2.09e-13 | 71.2 |
| MS.gene23573.t1 | MTR_3g116770 | 46.753 | 77 | 41 | 0 | 287 | 363 | 179 | 255 | 2.18e-13 | 71.2 |
| MS.gene23573.t1 | MTR_7g053410 | 49.231 | 65 | 33 | 0 | 299 | 363 | 317 | 381 | 3.07e-13 | 71.2 |
| MS.gene23573.t1 | MTR_7g053410 | 49.231 | 65 | 33 | 0 | 299 | 363 | 317 | 381 | 3.18e-13 | 71.2 |
| MS.gene23573.t1 | MTR_1g017350 | 41.860 | 86 | 42 | 1 | 278 | 363 | 247 | 324 | 3.87e-13 | 70.5 |
| MS.gene23573.t1 | MTR_1g017350 | 41.860 | 86 | 42 | 1 | 278 | 363 | 247 | 324 | 3.98e-13 | 70.5 |
| MS.gene23573.t1 | MTR_3g498825 | 50.769 | 65 | 32 | 0 | 299 | 363 | 147 | 211 | 4.13e-13 | 70.1 |
| MS.gene23573.t1 | MTR_8g012290 | 49.231 | 65 | 33 | 0 | 299 | 363 | 291 | 355 | 4.25e-13 | 70.9 |
| MS.gene23573.t1 | MTR_8g012290 | 49.231 | 65 | 33 | 0 | 299 | 363 | 291 | 355 | 4.34e-13 | 70.9 |
| MS.gene23573.t1 | MTR_1g017350 | 41.860 | 86 | 42 | 1 | 278 | 363 | 247 | 324 | 4.42e-13 | 70.5 |
| MS.gene23573.t1 | MTR_1g017350 | 41.860 | 86 | 42 | 1 | 278 | 363 | 247 | 324 | 4.59e-13 | 70.5 |
| MS.gene23573.t1 | MTR_8g065740 | 49.231 | 65 | 33 | 0 | 299 | 363 | 305 | 369 | 9.02e-13 | 69.7 |
| MS.gene23573.t1 | MTR_5g048860 | 43.590 | 78 | 36 | 1 | 286 | 363 | 360 | 429 | 2.15e-12 | 68.6 |
| MS.gene23573.t1 | MTR_8g062240 | 47.692 | 65 | 34 | 0 | 299 | 363 | 151 | 215 | 3.90e-12 | 66.6 |
| MS.gene23573.t1 | MTR_4g070320 | 47.692 | 65 | 34 | 0 | 299 | 363 | 143 | 207 | 4.00e-12 | 67.0 |
| MS.gene23573.t1 | MTR_5g037250 | 47.692 | 65 | 34 | 0 | 299 | 363 | 112 | 176 | 1.39e-11 | 64.3 |
| MS.gene23573.t1 | MTR_7g092510 | 43.284 | 67 | 38 | 0 | 297 | 363 | 171 | 237 | 1.92e-11 | 65.1 |
| MS.gene23573.t1 | MTR_8g099880 | 46.154 | 65 | 35 | 0 | 299 | 363 | 145 | 209 | 2.95e-11 | 64.3 |
| MS.gene23573.t1 | MTR_5g005110 | 48.485 | 66 | 33 | 1 | 298 | 363 | 223 | 287 | 3.05e-11 | 64.3 |
| MS.gene23573.t1 | MTR_1g018090 | 48.485 | 66 | 33 | 1 | 298 | 363 | 273 | 337 | 3.53e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23573.t1 | AT2G42280 | 36.141 | 368 | 168 | 11 | 40 | 371 | 15 | 351 | 8.54e-51 | 174 |
| MS.gene23573.t1 | AT2G42280 | 35.754 | 358 | 163 | 11 | 40 | 361 | 15 | 341 | 9.68e-46 | 160 |
| MS.gene23573.t1 | AT1G51140 | 31.771 | 384 | 200 | 12 | 32 | 373 | 15 | 378 | 1.02e-40 | 147 |
| MS.gene23573.t1 | AT2G43140 | 40.234 | 256 | 123 | 7 | 122 | 371 | 72 | 303 | 6.75e-39 | 141 |
| MS.gene23573.t1 | AT2G43140 | 43.784 | 185 | 79 | 4 | 188 | 371 | 46 | 206 | 1.77e-37 | 134 |
| MS.gene23573.t1 | AT1G05805 | 32.368 | 380 | 172 | 11 | 36 | 371 | 17 | 355 | 1.08e-36 | 136 |
| MS.gene23573.t1 | AT1G35460 | 63.218 | 87 | 30 | 1 | 285 | 371 | 169 | 253 | 6.46e-32 | 121 |
| MS.gene23573.t1 | AT4G09180 | 53.153 | 111 | 52 | 0 | 261 | 371 | 146 | 256 | 2.89e-31 | 119 |
| MS.gene23573.t1 | AT2G42280 | 31.731 | 312 | 146 | 11 | 40 | 315 | 15 | 295 | 1.18e-22 | 97.1 |
| MS.gene23573.t1 | AT2G24260 | 55.072 | 69 | 30 | 1 | 298 | 366 | 34 | 101 | 4.95e-17 | 80.1 |
| MS.gene23573.t1 | AT2G24260 | 55.072 | 69 | 30 | 1 | 298 | 366 | 137 | 204 | 1.12e-16 | 80.9 |
| MS.gene23573.t1 | AT4G30980 | 53.623 | 69 | 31 | 1 | 298 | 366 | 129 | 196 | 3.10e-16 | 79.0 |
| MS.gene23573.t1 | AT1G35460 | 64.286 | 56 | 18 | 1 | 285 | 340 | 169 | 222 | 4.29e-16 | 77.4 |
| MS.gene23573.t1 | AT4G30980 | 53.623 | 69 | 31 | 1 | 298 | 366 | 177 | 244 | 5.23e-16 | 79.0 |
| MS.gene23573.t1 | AT5G58010 | 52.174 | 69 | 32 | 1 | 298 | 366 | 98 | 165 | 6.50e-16 | 77.8 |
| MS.gene23573.t1 | AT4G34530 | 52.308 | 65 | 31 | 0 | 299 | 363 | 172 | 236 | 4.06e-14 | 73.2 |
| MS.gene23573.t1 | AT1G68920 | 43.011 | 93 | 48 | 1 | 276 | 363 | 274 | 366 | 1.64e-13 | 72.0 |
| MS.gene23573.t1 | AT1G68920 | 43.011 | 93 | 48 | 1 | 276 | 363 | 275 | 367 | 1.66e-13 | 72.0 |
| MS.gene23573.t1 | AT1G68920 | 43.011 | 93 | 48 | 1 | 276 | 363 | 275 | 367 | 1.66e-13 | 72.0 |
| MS.gene23573.t1 | AT1G68920 | 43.011 | 93 | 48 | 1 | 276 | 363 | 275 | 367 | 1.66e-13 | 72.0 |
| MS.gene23573.t1 | AT3G07340 | 49.231 | 65 | 33 | 0 | 299 | 363 | 258 | 322 | 8.88e-13 | 69.7 |
| MS.gene23573.t1 | AT3G07340 | 49.231 | 65 | 33 | 0 | 299 | 363 | 258 | 322 | 9.35e-13 | 69.7 |
| MS.gene23573.t1 | AT1G10120 | 41.379 | 87 | 43 | 1 | 277 | 363 | 192 | 270 | 1.11e-12 | 68.9 |
| MS.gene23573.t1 | AT1G10120 | 41.379 | 87 | 43 | 1 | 277 | 363 | 192 | 270 | 1.11e-12 | 68.9 |
| MS.gene23573.t1 | AT1G26260 | 50.769 | 65 | 32 | 0 | 299 | 363 | 201 | 265 | 1.12e-12 | 68.9 |
| MS.gene23573.t1 | AT1G26260 | 50.769 | 65 | 32 | 0 | 299 | 363 | 223 | 287 | 1.16e-12 | 68.9 |
| MS.gene23573.t1 | AT1G26260 | 50.769 | 65 | 32 | 0 | 299 | 363 | 223 | 287 | 1.16e-12 | 68.9 |
| MS.gene23573.t1 | AT1G26260 | 50.769 | 65 | 32 | 0 | 299 | 363 | 223 | 287 | 1.16e-12 | 68.9 |
| MS.gene23573.t1 | AT1G26260 | 50.769 | 65 | 32 | 0 | 299 | 363 | 223 | 287 | 1.16e-12 | 68.9 |
| MS.gene23573.t1 | AT1G26260 | 50.769 | 65 | 32 | 0 | 299 | 363 | 172 | 236 | 1.24e-12 | 68.6 |
| MS.gene23573.t1 | AT5G50915 | 47.692 | 65 | 34 | 0 | 299 | 363 | 136 | 200 | 2.17e-12 | 67.4 |
| MS.gene23573.t1 | AT5G50915 | 47.692 | 65 | 34 | 0 | 299 | 363 | 136 | 200 | 2.17e-12 | 67.4 |
| MS.gene23573.t1 | AT5G50915 | 47.692 | 65 | 34 | 0 | 299 | 363 | 136 | 200 | 2.22e-12 | 67.0 |
| MS.gene23573.t1 | AT5G50915 | 47.692 | 65 | 34 | 0 | 299 | 363 | 136 | 200 | 2.22e-12 | 67.0 |
| MS.gene23573.t1 | AT5G48560 | 47.692 | 65 | 34 | 0 | 299 | 363 | 301 | 365 | 2.53e-12 | 68.6 |
| MS.gene23573.t1 | AT5G48560 | 47.692 | 65 | 34 | 0 | 299 | 363 | 301 | 365 | 2.59e-12 | 68.2 |
| MS.gene23573.t1 | AT4G33880 | 45.349 | 86 | 42 | 2 | 278 | 363 | 249 | 329 | 3.01e-12 | 67.8 |
| MS.gene23573.t1 | AT4G36540 | 40.476 | 84 | 50 | 0 | 280 | 363 | 122 | 205 | 4.46e-12 | 66.6 |
| MS.gene23573.t1 | AT4G36540 | 40.476 | 84 | 50 | 0 | 280 | 363 | 122 | 205 | 4.53e-12 | 66.6 |
| MS.gene23573.t1 | AT3G57800 | 44.776 | 67 | 37 | 0 | 297 | 363 | 202 | 268 | 4.58e-12 | 67.4 |
| MS.gene23573.t1 | AT2G42300 | 44.776 | 67 | 37 | 0 | 297 | 363 | 183 | 249 | 4.71e-12 | 67.0 |
| MS.gene23573.t1 | AT3G23690 | 46.154 | 65 | 35 | 0 | 299 | 363 | 191 | 255 | 4.98e-12 | 67.0 |
| MS.gene23573.t1 | AT2G42300 | 44.776 | 67 | 37 | 0 | 297 | 363 | 183 | 249 | 5.34e-12 | 66.2 |
| MS.gene23573.t1 | AT2G18300 | 46.154 | 65 | 35 | 0 | 299 | 363 | 185 | 249 | 6.46e-12 | 66.6 |
| MS.gene23573.t1 | AT2G18300 | 46.154 | 65 | 35 | 0 | 299 | 363 | 185 | 249 | 6.48e-12 | 66.6 |
| MS.gene23573.t1 | AT2G18300 | 46.154 | 65 | 35 | 0 | 299 | 363 | 185 | 249 | 7.01e-12 | 66.6 |
| MS.gene23573.t1 | AT1G59640 | 47.692 | 65 | 34 | 0 | 299 | 363 | 136 | 200 | 9.35e-12 | 65.1 |
| MS.gene23573.t1 | AT1G59640 | 47.692 | 65 | 34 | 0 | 299 | 363 | 136 | 200 | 1.41e-11 | 65.5 |
| MS.gene23573.t1 | AT1G27740 | 47.143 | 70 | 36 | 1 | 294 | 363 | 162 | 230 | 1.43e-11 | 64.7 |
| MS.gene23573.t1 | AT1G73830 | 46.154 | 65 | 35 | 0 | 299 | 363 | 147 | 211 | 1.73e-11 | 64.3 |
| MS.gene23573.t1 | AT1G73830 | 46.154 | 65 | 35 | 0 | 299 | 363 | 147 | 211 | 1.86e-11 | 64.3 |
| MS.gene23573.t1 | AT1G25330 | 43.243 | 74 | 41 | 1 | 299 | 371 | 104 | 177 | 2.37e-11 | 63.5 |
Find 62 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGAAATGGATTCAAAATT+TGG | 0.143373 | 8.4:+61136848 | MS.gene23573:CDS |
| ACACTTCCTACCTCTCTTAA+TGG | 0.183445 | 8.4:-61138593 | None:intergenic |
| AGTTGCCAGAATGTAGATTT+TGG | 0.208118 | 8.4:+61139437 | MS.gene23573:intron |
| ACCCTCTCTGCAATGCTTCT+AGG | 0.208569 | 8.4:-61139596 | None:intergenic |
| TATTGTATTCCATGTGAAAA+AGG | 0.235273 | 8.4:-61137109 | None:intergenic |
| ACCACTATCAACCGAATAAT+TGG | 0.239497 | 8.4:-61137296 | None:intergenic |
| GGATTTCCAAATGGTTCTTT+AGG | 0.260650 | 8.4:+61137190 | MS.gene23573:CDS |
| CAATACAATGATTACTCTTA+TGG | 0.263413 | 8.4:+61137127 | MS.gene23573:CDS |
| TATATTACCTTATCTGCATT+TGG | 0.272226 | 8.4:-61139766 | None:intergenic |
| CAATTTGCTTGAAGAGCTTC+AGG | 0.284637 | 8.4:-61138719 | None:intergenic |
| AGAGAGGTAGGAAGTGTAAA+TGG | 0.308528 | 8.4:+61138599 | MS.gene23573:CDS |
| TTCTTCCAAGATGGCTACTA+TGG | 0.309052 | 8.4:+61139505 | MS.gene23573:CDS |
| GCGTTAAGCCGGAATTGTTT+TGG | 0.328492 | 8.4:-61136898 | None:intergenic |
| GTGAGTGGCAAAGCCTCTTT+TGG | 0.336425 | 8.4:-61139573 | None:intergenic |
| ATATTACCTTATCTGCATTT+GGG | 0.367954 | 8.4:-61139765 | None:intergenic |
| TCCAATTATTCGGTTGATAG+TGG | 0.369287 | 8.4:+61137295 | MS.gene23573:CDS |
| CCCTCTCTGCAATGCTTCTA+GGG | 0.373214 | 8.4:-61139595 | None:intergenic |
| CTTCTCCATAGTAGCCATCT+TGG | 0.374024 | 8.4:-61139510 | None:intergenic |
| CCTTATCTGCATTTGGGAAA+AGG | 0.380651 | 8.4:-61139759 | None:intergenic |
| ACTACATCATCTAGTGGATA+TGG | 0.382484 | 8.4:+61138629 | MS.gene23573:CDS |
| CATTGTCTCCAAAACAATTC+CGG | 0.388810 | 8.4:+61136890 | MS.gene23573:CDS |
| CACTGACAAAGATTCAGAAT+TGG | 0.412608 | 8.4:-61137068 | None:intergenic |
| AGAAACATGGGAAATGATAA+TGG | 0.418925 | 8.4:+61138752 | MS.gene23573:CDS |
| TTCAAATGCTTTGGAAAGTC+AGG | 0.424743 | 8.4:+61138886 | MS.gene23573:CDS |
| TCAACACCTAAAGAACCATT+TGG | 0.425199 | 8.4:-61137196 | None:intergenic |
| AATGGTTCTTTAGGTGTTGA+AGG | 0.428511 | 8.4:+61137199 | MS.gene23573:CDS |
| GTCAGTGAAACAAGAAGAAA+AGG | 0.437216 | 8.4:+61137084 | MS.gene23573:CDS |
| TTCAATGAAGAACACAGAAA+TGG | 0.438657 | 8.4:+61136835 | MS.gene23573:CDS |
| CCCTAGAAGCATTGCAGAGA+GGG | 0.444514 | 8.4:+61139595 | MS.gene23573:CDS |
| TGTAAAATTCGTGCCAAAAG+AGG | 0.450273 | 8.4:+61139560 | MS.gene23573:CDS |
| ATAATTGCTCCAATCTCATT+AGG | 0.465778 | 8.4:+61137245 | MS.gene23573:CDS |
| CTAGCTTCACCAATGACTAC+TGG | 0.472078 | 8.4:+61138795 | MS.gene23573:CDS |
| AACCTATGTTTGTGTCTACA+AGG | 0.486036 | 8.4:-61136955 | None:intergenic |
| AGCTAGGCAGACTCAAATGA+TGG | 0.490931 | 8.4:-61139481 | None:intergenic |
| CATAATCAAGGATTTCCAAA+TGG | 0.493678 | 8.4:+61137181 | MS.gene23573:CDS |
| AGAACTATCCCAGTAGTCAT+TGG | 0.496050 | 8.4:-61138804 | None:intergenic |
| AACTAGCACTGCTGATATGT+TGG | 0.496568 | 8.4:+61140010 | MS.gene23573:CDS |
| AGAGCTCAGGAAACAACTTA+AGG | 0.497819 | 8.4:+61140055 | MS.gene23573:CDS |
| TTGAGTACATTAAAGAGCTC+AGG | 0.507440 | 8.4:+61140042 | MS.gene23573:CDS |
| TATCAAACTCAACATAATCA+AGG | 0.521491 | 8.4:+61137169 | MS.gene23573:CDS |
| GCAGATACTAACAGAGACTA+AGG | 0.529764 | 8.4:+61140536 | MS.gene23573:intron |
| GCCTAGCTCTTCTTCCAAGA+TGG | 0.534945 | 8.4:+61139496 | MS.gene23573:CDS |
| ACTTTCCAAAGCATTTGAAG+TGG | 0.539932 | 8.4:-61138882 | None:intergenic |
| TTTGCACCATTAAGAGAGGT+AGG | 0.543973 | 8.4:+61138587 | MS.gene23573:CDS |
| TGAACGATACCGCGTTAAGC+CGG | 0.550117 | 8.4:-61136909 | None:intergenic |
| TGTATTAAAAGTAGAAACAT+GGG | 0.555635 | 8.4:+61138740 | MS.gene23573:CDS |
| TAGCTTCACCAATGACTACT+GGG | 0.565945 | 8.4:+61138796 | MS.gene23573:CDS |
| AGATTCAGAATTGGTAAACA+TGG | 0.566542 | 8.4:-61137059 | None:intergenic |
| TTGTATTAAAAGTAGAAACA+TGG | 0.569384 | 8.4:+61138739 | MS.gene23573:CDS |
| CAGTAGTCATTGGTGAAGCT+AGG | 0.577944 | 8.4:-61138794 | None:intergenic |
| AGGCTTGTAAGTAACGAGCT+TGG | 0.582153 | 8.4:-61136935 | None:intergenic |
| TGGCATCTTGATAGAGCAAG+AGG | 0.582833 | 8.4:-61138678 | None:intergenic |
| CAAGCTTTCAACTACTCTGA+AGG | 0.588993 | 8.4:+61136809 | MS.gene23573:CDS |
| TGCAATGCTTCTAGGGTGAG+TGG | 0.590036 | 8.4:-61139588 | None:intergenic |
| CAAGCTACTACATCATCTAG+TGG | 0.611174 | 8.4:+61138623 | MS.gene23573:CDS |
| AAAACAATTCCGGCTTAACG+CGG | 0.617284 | 8.4:+61136900 | MS.gene23573:CDS |
| GCCATCTTGGAAGAAGAGCT+AGG | 0.619465 | 8.4:-61139497 | None:intergenic |
| ATCTTGATAGAGCAAGAGGA+TGG | 0.627820 | 8.4:-61138674 | None:intergenic |
| GCTAGGCAGACTCAAATGAT+GGG | 0.628666 | 8.4:-61139480 | None:intergenic |
| GCTTTCAACTACTCTGAAGG+TGG | 0.629565 | 8.4:+61136812 | MS.gene23573:CDS |
| AGCCTTGTAGACACAAACAT+AGG | 0.644549 | 8.4:+61136953 | MS.gene23573:CDS |
| ACCCTAGAAGCATTGCAGAG+AGG | 0.691130 | 8.4:+61139594 | MS.gene23573:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGCAAAAAATTTATTTT+TGG | + | chr8.4:61140096-61140115 | MS.gene23573:intron | 10.0% |
| !!! | AAAAGTATATTTTACTTTGT+AGG | + | chr8.4:61138534-61138553 | MS.gene23573:intron | 15.0% |
| !!! | AAAGTATATTTTACTTTGTA+GGG | + | chr8.4:61138535-61138554 | MS.gene23573:intron | 15.0% |
| !!! | AAATATATGCATATTTTTCT+AGG | + | chr8.4:61138075-61138094 | MS.gene23573:intron | 15.0% |
| !!! | AGTAAAATATACTTTTTCAA+TGG | - | chr8.4:61138530-61138549 | None:intergenic | 15.0% |
| !!! | ATACTAAAATTTAGTTTAGA+AGG | + | chr8.4:61138038-61138057 | MS.gene23573:intron | 15.0% |
| !!! | TATGTTTTTTTTATCTTACT+TGG | + | chr8.4:61137318-61137337 | MS.gene23573:intron | 15.0% |
| !! | CTAAGTATAATCTTTACAAA+AGG | - | chr8.4:61138953-61138972 | None:intergenic | 20.0% |
| !! | GAATAGACAATTAATTATCT+TGG | + | chr8.4:61137929-61137948 | MS.gene23573:intron | 20.0% |
| !! | GATAATATAGTAAAGCAATT+GGG | + | chr8.4:61137802-61137821 | MS.gene23573:intron | 20.0% |
| !! | GTAAAAGTAGTTTATACATA+AGG | - | chr8.4:61138293-61138312 | None:intergenic | 20.0% |
| !! | TAATTAAAATGTTCTAGTGA+GGG | - | chr8.4:61140341-61140360 | None:intergenic | 20.0% |
| !! | TAATTAATTGTCTATTCATC+AGG | - | chr8.4:61137926-61137945 | None:intergenic | 20.0% |
| !! | TAATTATCTTGGACATTATT+AGG | + | chr8.4:61137940-61137959 | MS.gene23573:intron | 20.0% |
| !! | TCAACAATGATAAAAGTTTA+AGG | - | chr8.4:61139403-61139422 | None:intergenic | 20.0% |
| !! | TCTAAAAAAACTTGTACTAA+TGG | + | chr8.4:61138559-61138578 | MS.gene23573:intron | 20.0% |
| !! | TGAAATTTGTGATTATAGAA+AGG | - | chr8.4:61139632-61139651 | None:intergenic | 20.0% |
| !! | TGATAATATAGTAAAGCAAT+TGG | + | chr8.4:61137801-61137820 | MS.gene23573:intron | 20.0% |
| !! | TGTATTAAAAGTAGAAACAT+GGG | + | chr8.4:61138740-61138759 | MS.gene23573:CDS | 20.0% |
| !! | TTAATTAAAATGTTCTAGTG+AGG | - | chr8.4:61140342-61140361 | None:intergenic | 20.0% |
| !! | TTGTATTAAAAGTAGAAACA+TGG | + | chr8.4:61138739-61138758 | MS.gene23573:CDS | 20.0% |
| !! | TTTCCATAAAAAATAAGAAC+AGG | - | chr8.4:61137679-61137698 | None:intergenic | 20.0% |
| !!! | AACTTTTTGAGTAAAAATTC+TGG | - | chr8.4:61139149-61139168 | None:intergenic | 20.0% |
| !!! | AGATTCAAAATTTTGGTTTT+TGG | - | chr8.4:61139327-61139346 | None:intergenic | 20.0% |
| !!! | ATACCTGTTCTTATTTTTTA+TGG | + | chr8.4:61137673-61137692 | MS.gene23573:intron | 20.0% |
| !!! | ATTTCTTTTTTGATAATGCT+TGG | + | chr8.4:61137399-61137418 | MS.gene23573:intron | 20.0% |
| !!! | ATTTTTTAGTAGAGAATAGT+AGG | + | chr8.4:61139356-61139375 | MS.gene23573:intron | 20.0% |
| !!! | CAAAATGAGATTCAAAATTT+TGG | - | chr8.4:61139334-61139353 | None:intergenic | 20.0% |
| !!! | TCTAAGAAAAGTAATTTTGT+AGG | + | chr8.4:61137642-61137661 | MS.gene23573:intron | 20.0% |
| !!! | TTACTTGGTAATATCTATTA+TGG | + | chr8.4:61137333-61137352 | MS.gene23573:intron | 20.0% |
| ! | AAACAAGACATGTATTGTTA+AGG | - | chr8.4:61138249-61138268 | None:intergenic | 25.0% |
| ! | AACAAGACATGTATTGTTAA+GGG | - | chr8.4:61138248-61138267 | None:intergenic | 25.0% |
| ! | ACACCACATTTAAATTTGAT+AGG | + | chr8.4:61140122-61140141 | MS.gene23573:intron | 25.0% |
| ! | ACATAACACATCATATTGTT+GGG | + | chr8.4:61139931-61139950 | MS.gene23573:intron | 25.0% |
| ! | AGTCCTATCAAATTTAAATG+TGG | - | chr8.4:61140128-61140147 | None:intergenic | 25.0% |
| ! | ATATTACCTTATCTGCATTT+GGG | - | chr8.4:61139768-61139787 | None:intergenic | 25.0% |
| ! | ATCAAGCTCAAATCTATTAT+CGG | + | chr8.4:61137423-61137442 | MS.gene23573:intron | 25.0% |
| ! | CAATAATACTGCACAAAATA+GGG | - | chr8.4:61137783-61137802 | None:intergenic | 25.0% |
| ! | CAATACAATGATTACTCTTA+TGG | + | chr8.4:61137127-61137146 | MS.gene23573:CDS | 25.0% |
| ! | CCAAAAAATGCTACTAATAA+GGG | + | chr8.4:61138845-61138864 | MS.gene23573:CDS | 25.0% |
| ! | CTCTCTTTAGATTCAAAATT+CGG | - | chr8.4:61139183-61139202 | None:intergenic | 25.0% |
| ! | GGATCAACTAAAAATTTAAG+AGG | + | chr8.4:61137569-61137588 | MS.gene23573:intron | 25.0% |
| ! | TATATTACCTTATCTGCATT+TGG | - | chr8.4:61139769-61139788 | None:intergenic | 25.0% |
| ! | TATATTTACTTAACACACGA+TGG | + | chr8.4:61138124-61138143 | MS.gene23573:intron | 25.0% |
| ! | TATCAAACTCAACATAATCA+AGG | + | chr8.4:61137169-61137188 | MS.gene23573:CDS | 25.0% |
| ! | TATTGTATTCCATGTGAAAA+AGG | - | chr8.4:61137112-61137131 | None:intergenic | 25.0% |
| ! | TCAATAATACTGCACAAAAT+AGG | - | chr8.4:61137784-61137803 | None:intergenic | 25.0% |
| ! | TCCAAAAAATGCTACTAATA+AGG | + | chr8.4:61138844-61138863 | MS.gene23573:CDS | 25.0% |
| ! | TCTCTTTAGATTCAAAATTC+GGG | - | chr8.4:61139182-61139201 | None:intergenic | 25.0% |
| !! | AAATCAGGTCTTTTCTTTTA+CGG | - | chr8.4:61137534-61137553 | None:intergenic | 25.0% |
| !! | ACAGAAATGGATTCAAAATT+TGG | + | chr8.4:61136848-61136867 | MS.gene23573:CDS | 25.0% |
| !! | CTTGATCATAGATTTGAAAT+CGG | + | chr8.4:61140300-61140319 | MS.gene23573:intron | 25.0% |
| !! | TAATTGAGTGTTACTCTAAA+TGG | - | chr8.4:61140265-61140284 | None:intergenic | 25.0% |
| !! | TGAGTTTTTCTCCAATTATT+CGG | + | chr8.4:61137285-61137304 | MS.gene23573:CDS | 25.0% |
| !! | TTAACAATACATGTCTTGTT+TGG | + | chr8.4:61138248-61138267 | MS.gene23573:intron | 25.0% |
| !!! | CTTGTTTTAGGTAAAATAGT+GGG | - | chr8.4:61139051-61139070 | None:intergenic | 25.0% |
| !!! | GAATTTCCATTTTAACCAAT+TGG | + | chr8.4:61138927-61138946 | MS.gene23573:intron | 25.0% |
| !!! | GTTGATTTTATAAACTATCC+TGG | + | chr8.4:61138358-61138377 | MS.gene23573:intron | 25.0% |
| !!! | TCTTGTTTTAGGTAAAATAG+TGG | - | chr8.4:61139052-61139071 | None:intergenic | 25.0% |
| !!! | TTGAGTAAAAATTCTGGTTT+TGG | - | chr8.4:61139143-61139162 | None:intergenic | 25.0% |
| AAAAAACTTGTACTAATGGC+AGG | + | chr8.4:61138563-61138582 | MS.gene23573:intron | 30.0% | |
| AAAAGGCCAATTGGTTAAAA+TGG | - | chr8.4:61138936-61138955 | None:intergenic | 30.0% | |
| AATCTTTACAAAAGGCCAAT+TGG | - | chr8.4:61138945-61138964 | None:intergenic | 30.0% | |
| ACAAAACATTATCACTTTCG+AGG | + | chr8.4:61139206-61139225 | MS.gene23573:intron | 30.0% | |
| AGAAACATGGGAAATGATAA+TGG | + | chr8.4:61138752-61138771 | MS.gene23573:CDS | 30.0% | |
| AGATTCAGAATTGGTAAACA+TGG | - | chr8.4:61137062-61137081 | None:intergenic | 30.0% | |
| AGCACTAACAATTACACAAA+AGG | - | chr8.4:61137364-61137383 | None:intergenic | 30.0% | |
| ATAATTGCTCCAATCTCATT+AGG | + | chr8.4:61137245-61137264 | MS.gene23573:CDS | 30.0% | |
| ATTACGACAATGTGTGAAAT+TGG | + | chr8.4:61139297-61139316 | MS.gene23573:intron | 30.0% | |
| CAAAAAATTGTGAAATCGAG+GGG | - | chr8.4:61139110-61139129 | None:intergenic | 30.0% | |
| CAAACAATGTAGAGTTTAGT+GGG | - | chr8.4:61140494-61140513 | None:intergenic | 30.0% | |
| CAAATCAAGCATATCAAAGT+GGG | + | chr8.4:61140227-61140246 | MS.gene23573:intron | 30.0% | |
| CACATAACACATCATATTGT+TGG | + | chr8.4:61139930-61139949 | MS.gene23573:intron | 30.0% | |
| CACTTTGATATGCTTGATTT+GGG | - | chr8.4:61140228-61140247 | None:intergenic | 30.0% | |
| CATAATCAAGGATTTCCAAA+TGG | + | chr8.4:61137181-61137200 | MS.gene23573:CDS | 30.0% | |
| CCATATTGTTTACCCAAAAT+TGG | - | chr8.4:61139265-61139284 | None:intergenic | 30.0% | |
| GCAAAAAATTGTGAAATCGA+GGG | - | chr8.4:61139111-61139130 | None:intergenic | 30.0% | |
| TAAAACACAACCAAAAAGCA+GGG | - | chr8.4:61139837-61139856 | None:intergenic | 30.0% | |
| TAGAGTAACACTCAATTACA+TGG | + | chr8.4:61140267-61140286 | MS.gene23573:intron | 30.0% | |
| TCAAACAATGTAGAGTTTAG+TGG | - | chr8.4:61140495-61140514 | None:intergenic | 30.0% | |
| TCAAGCTCAAATCTATTATC+GGG | + | chr8.4:61137424-61137443 | MS.gene23573:intron | 30.0% | |
| TGCAAAAAATTGTGAAATCG+AGG | - | chr8.4:61139112-61139131 | None:intergenic | 30.0% | |
| TTAAAACACAACCAAAAAGC+AGG | - | chr8.4:61139838-61139857 | None:intergenic | 30.0% | |
| TTAATTGTCTATTCATCAGG+AGG | - | chr8.4:61137923-61137942 | None:intergenic | 30.0% | |
| TTACGACAATGTGTGAAATT+GGG | + | chr8.4:61139298-61139317 | MS.gene23573:intron | 30.0% | |
| TTCAATGAAGAACACAGAAA+TGG | + | chr8.4:61136835-61136854 | MS.gene23573:CDS | 30.0% | |
| TTGGGTAAACAATATGGATT+GGG | + | chr8.4:61139268-61139287 | MS.gene23573:intron | 30.0% | |
| TTTGGGTAAACAATATGGAT+TGG | + | chr8.4:61139267-61139286 | MS.gene23573:intron | 30.0% | |
| ! | AACTTTTACTAAAACCATGG+TGG | + | chr8.4:61139863-61139882 | MS.gene23573:intron | 30.0% |
| ! | AGACAAAAGTTGCCAATTTT+GGG | + | chr8.4:61139250-61139269 | MS.gene23573:intron | 30.0% |
| ! | AGGTCTTATCTCATCAAATA+TGG | - | chr8.4:61137509-61137528 | None:intergenic | 30.0% |
| ! | CGTAACTTTTACTAAAACCA+TGG | + | chr8.4:61139860-61139879 | MS.gene23573:intron | 30.0% |
| ! | GAAAAGTAATTTTGTAGGAG+TGG | + | chr8.4:61137647-61137666 | MS.gene23573:intron | 30.0% |
| ! | GATTTTGGATACCAAAAACT+TGG | + | chr8.4:61139452-61139471 | MS.gene23573:CDS | 30.0% |
| ! | GGTTCATTTTCAACAATTTG+TGG | - | chr8.4:61138701-61138720 | None:intergenic | 30.0% |
| ! | TTCACACATTGTCGTAATTT+TGG | - | chr8.4:61139295-61139314 | None:intergenic | 30.0% |
| !! | CCAATTTTGGGTAAACAATA+TGG | + | chr8.4:61139262-61139281 | MS.gene23573:intron | 30.0% |
| !! | GTTGAAGGAAATGTTTTTGA+TGG | + | chr8.4:61137214-61137233 | MS.gene23573:CDS | 30.0% |
| !!! | CCCTTATTAGTAGCATTTTT+TGG | - | chr8.4:61138848-61138867 | None:intergenic | 30.0% |
| !!! | GAGGACTAAAATCTTGTTTT+AGG | - | chr8.4:61139063-61139082 | None:intergenic | 30.0% |
| !!! | TTTTTTGATTTGCACATTGC+AGG | + | chr8.4:61139693-61139712 | MS.gene23573:intron | 30.0% |
| AACCTATGTTTGTGTCTACA+AGG | - | chr8.4:61136958-61136977 | None:intergenic | 35.0% | |
| AATAGTCAACTCTCTTAGCA+AGG | - | chr8.4:61137869-61137888 | None:intergenic | 35.0% | |
| ACCACTATCAACCGAATAAT+TGG | - | chr8.4:61137299-61137318 | None:intergenic | 35.0% | |
| AGGTACAATGCTACAAACAT+TGG | - | chr8.4:61139383-61139402 | None:intergenic | 35.0% | |
| CACTGACAAAGATTCAGAAT+TGG | - | chr8.4:61137071-61137090 | None:intergenic | 35.0% | |
| CATTGTCTCCAAAACAATTC+CGG | + | chr8.4:61136890-61136909 | MS.gene23573:CDS | 35.0% | |
| CCAAATCAAGCATATCAAAG+TGG | + | chr8.4:61140226-61140245 | MS.gene23573:intron | 35.0% | |
| CCACTTTGATATGCTTGATT+TGG | - | chr8.4:61140229-61140248 | None:intergenic | 35.0% | |
| GAAGAGAAGAGGGTAAAAAT+GGG | + | chr8.4:61137966-61137985 | MS.gene23573:intron | 35.0% | |
| GAATGAGAAGAACACTTAGA+CGG | - | chr8.4:61140439-61140458 | None:intergenic | 35.0% | |
| GAGGGTAAAAATGGGATATT+AGG | + | chr8.4:61137974-61137993 | MS.gene23573:intron | 35.0% | |
| GGATTTCCAAATGGTTCTTT+AGG | + | chr8.4:61137190-61137209 | MS.gene23573:CDS | 35.0% | |
| GGTATCCAAAATCTACATTC+TGG | - | chr8.4:61139445-61139464 | None:intergenic | 35.0% | |
| GTCAGTGAAACAAGAAGAAA+AGG | + | chr8.4:61137084-61137103 | MS.gene23573:CDS | 35.0% | |
| TAATTGGAGAAAAACTCAGC+AGG | - | chr8.4:61137283-61137302 | None:intergenic | 35.0% | |
| TACGACAATGTGTGAAATTG+GGG | + | chr8.4:61139299-61139318 | MS.gene23573:intron | 35.0% | |
| TACTCTAAATGGAGAACTCT+GGG | - | chr8.4:61140254-61140273 | None:intergenic | 35.0% | |
| TATCTTGGACATTATTAGGC+TGG | + | chr8.4:61137944-61137963 | MS.gene23573:intron | 35.0% | |
| TCAACACCTAAAGAACCATT+TGG | - | chr8.4:61137199-61137218 | None:intergenic | 35.0% | |
| TCCATTTCTGAACTTGTAGA+GGG | - | chr8.4:61137037-61137056 | None:intergenic | 35.0% | |
| TGGTACGTGTGTTAAAAGTA+AGG | + | chr8.4:61140164-61140183 | MS.gene23573:intron | 35.0% | |
| TGTAAAATTCGTGCCAAAAG+AGG | + | chr8.4:61139560-61139579 | MS.gene23573:CDS | 35.0% | |
| TTACTCTAAATGGAGAACTC+TGG | - | chr8.4:61140255-61140274 | None:intergenic | 35.0% | |
| TTCCATTTCTGAACTTGTAG+AGG | - | chr8.4:61137038-61137057 | None:intergenic | 35.0% | |
| TTGAGTACATTAAAGAGCTC+AGG | + | chr8.4:61140042-61140061 | MS.gene23573:CDS | 35.0% | |
| TTTAATTGCCTCTTTGTGAG+AGG | - | chr8.4:61139003-61139022 | None:intergenic | 35.0% | |
| ! | ACTACATCATCTAGTGGATA+TGG | + | chr8.4:61138629-61138648 | MS.gene23573:CDS | 35.0% |
| ! | ACTCTTTTGCCTAATGAGAT+TGG | - | chr8.4:61137257-61137276 | None:intergenic | 35.0% |
| ! | ACTTTCCAAAGCATTTGAAG+TGG | - | chr8.4:61138885-61138904 | None:intergenic | 35.0% |
| ! | ACTTTTAACACACGTACCAT+CGG | - | chr8.4:61140163-61140182 | None:intergenic | 35.0% |
| ! | AGGTCTTTTCTTTTACGGTT+AGG | - | chr8.4:61137529-61137548 | None:intergenic | 35.0% |
| ! | AGTTGCCAGAATGTAGATTT+TGG | + | chr8.4:61139437-61139456 | MS.gene23573:intron | 35.0% |
| ! | CAAAATCCGGATTTTCGAAT+GGG | - | chr8.4:61139085-61139104 | None:intergenic | 35.0% |
| ! | CTTTTGGCACGAATTTTACA+TGG | - | chr8.4:61139560-61139579 | None:intergenic | 35.0% |
| ! | GAAAAGACCTGATTTTGTAG+CGG | + | chr8.4:61137539-61137558 | MS.gene23573:intron | 35.0% |
| ! | GAGAAGTTTTTACACGTTCA+AGG | + | chr8.4:61139527-61139546 | MS.gene23573:CDS | 35.0% |
| ! | GAGACAAAAGTTGCCAATTT+TGG | + | chr8.4:61139249-61139268 | MS.gene23573:intron | 35.0% |
| ! | GTTTTCCACTTCAAATGCTT+TGG | + | chr8.4:61138877-61138896 | MS.gene23573:CDS | 35.0% |
| ! | GTTTTCTTCAAGAGAAGCTT+GGG | + | chr8.4:61138182-61138201 | MS.gene23573:intron | 35.0% |
| ! | TCAAAATCCGGATTTTCGAA+TGG | - | chr8.4:61139086-61139105 | None:intergenic | 35.0% |
| ! | TGGTTGGTCAATATTGATCA+TGG | - | chr8.4:61137711-61137730 | None:intergenic | 35.0% |
| ! | TGTTTTCTTCAAGAGAAGCT+TGG | + | chr8.4:61138181-61138200 | MS.gene23573:intron | 35.0% |
| ! | TTGCTTGCTAGTTGTTAACT+AGG | + | chr8.4:61137735-61137754 | MS.gene23573:intron | 35.0% |
| !! | AATGGTTCTTTAGGTGTTGA+AGG | + | chr8.4:61137199-61137218 | MS.gene23573:CDS | 35.0% |
| !! | ACACTCCAAGATGTTAGTTT+TGG | + | chr8.4:61137458-61137477 | MS.gene23573:intron | 35.0% |
| !! | GAAAAGGATCCTTTTTCACA+TGG | + | chr8.4:61137100-61137119 | MS.gene23573:CDS | 35.0% |
| !! | GACTTGTGAATTTTAACCGA+TGG | + | chr8.4:61140144-61140163 | MS.gene23573:intron | 35.0% |
| !! | GATGTGTTATGTGCTAGTTT+TGG | - | chr8.4:61139923-61139942 | None:intergenic | 35.0% |
| !! | TCCAATTATTCGGTTGATAG+TGG | + | chr8.4:61137295-61137314 | MS.gene23573:CDS | 35.0% |
| !! | TTCAAATGCTTTGGAAAGTC+AGG | + | chr8.4:61138886-61138905 | MS.gene23573:CDS | 35.0% |
| !!! | CACTCCAAGATGTTAGTTTT+GGG | + | chr8.4:61137459-61137478 | MS.gene23573:intron | 35.0% |
| !!! | CTTATTTTTGTAAGCTCTCC+AGG | - | chr8.4:61138379-61138398 | None:intergenic | 35.0% |
| !!! | GTTATGTGCTAGTTTTGGAT+TGG | - | chr8.4:61139918-61139937 | None:intergenic | 35.0% |
| AAAACAATTCCGGCTTAACG+CGG | + | chr8.4:61136900-61136919 | MS.gene23573:CDS | 40.0% | |
| AAATCGAGGGGATCAAAATC+CGG | - | chr8.4:61139098-61139117 | None:intergenic | 40.0% | |
| AAATCTATTATCGGGCCACT+CGG | + | chr8.4:61137432-61137451 | MS.gene23573:intron | 40.0% | |
| AACAACTAGCAAGCAAGCTT+TGG | - | chr8.4:61137731-61137750 | None:intergenic | 40.0% | |
| AACTAGCACTGCTGATATGT+TGG | + | chr8.4:61140010-61140029 | MS.gene23573:CDS | 40.0% | |
| ACACTTCCTACCTCTCTTAA+TGG | - | chr8.4:61138596-61138615 | None:intergenic | 40.0% | |
| ACGACAATGTGTGAAATTGG+GGG | + | chr8.4:61139300-61139319 | MS.gene23573:intron | 40.0% | |
| AGAACTATCCCAGTAGTCAT+TGG | - | chr8.4:61138807-61138826 | None:intergenic | 40.0% | |
| AGAGCTCAGGAAACAACTTA+AGG | + | chr8.4:61140055-61140074 | MS.gene23573:CDS | 40.0% | |
| ATCTTGATAGAGCAAGAGGA+TGG | - | chr8.4:61138677-61138696 | None:intergenic | 40.0% | |
| CAAGCTACTACATCATCTAG+TGG | + | chr8.4:61138623-61138642 | MS.gene23573:CDS | 40.0% | |
| CAAGCTTTCAACTACTCTGA+AGG | + | chr8.4:61136809-61136828 | MS.gene23573:CDS | 40.0% | |
| CCTTATCTGCATTTGGGAAA+AGG | - | chr8.4:61139762-61139781 | None:intergenic | 40.0% | |
| GAACAAGAAGAACCATGCTT+AGG | - | chr8.4:61138981-61139000 | None:intergenic | 40.0% | |
| GCAGATACTAACAGAGACTA+AGG | + | chr8.4:61140536-61140555 | MS.gene23573:intron | 40.0% | |
| GGAAGAGAAGAGGGTAAAAA+TGG | + | chr8.4:61137965-61137984 | MS.gene23573:intron | 40.0% | |
| GGAGAGAATCTGTGAAAAGA+AGG | + | chr8.4:61137995-61138014 | MS.gene23573:intron | 40.0% | |
| TAATCCACCGCTACAAAATC+AGG | - | chr8.4:61137549-61137568 | None:intergenic | 40.0% | |
| TACGCCCAAAACTAACATCT+TGG | - | chr8.4:61137466-61137485 | None:intergenic | 40.0% | |
| TACTTAGATACGCCTAAGCA+TGG | + | chr8.4:61138966-61138985 | MS.gene23573:intron | 40.0% | |
| TAGCTTCACCAATGACTACT+GGG | + | chr8.4:61138796-61138815 | MS.gene23573:CDS | 40.0% | |
| TATTAGGCTGGAAGAGAAGA+GGG | + | chr8.4:61137956-61137975 | MS.gene23573:intron | 40.0% | |
| TCCCTCTACAAGTTCAGAAA+TGG | + | chr8.4:61137033-61137052 | MS.gene23573:intron | 40.0% | |
| TCTTGAGTCCTAACTCCTAA+GGG | + | chr8.4:61138147-61138166 | MS.gene23573:intron | 40.0% | |
| TGATGATACTACTTCCCTCT+TGG | + | chr8.4:61139982-61140001 | MS.gene23573:intron | 40.0% | |
| TTATTAGGCTGGAAGAGAAG+AGG | + | chr8.4:61137955-61137974 | MS.gene23573:intron | 40.0% | |
| TTCTTCCAAGATGGCTACTA+TGG | + | chr8.4:61139505-61139524 | MS.gene23573:CDS | 40.0% | |
| TTCTTGTTCCTCTCACAAAG+AGG | + | chr8.4:61138992-61139011 | MS.gene23573:intron | 40.0% | |
| TTTGCACCATTAAGAGAGGT+AGG | + | chr8.4:61138587-61138606 | MS.gene23573:CDS | 40.0% | |
| ! | AACAGAGATCTTTTGCCCTT+AGG | - | chr8.4:61138165-61138184 | None:intergenic | 40.0% |
| ! | AGAGAGGTAGGAAGTGTAAA+TGG | + | chr8.4:61138599-61138618 | MS.gene23573:CDS | 40.0% |
| ! | AGCCTTGTAGACACAAACAT+AGG | + | chr8.4:61136953-61136972 | MS.gene23573:CDS | 40.0% |
| ! | AGGTTTTGCACCATTAAGAG+AGG | + | chr8.4:61138583-61138602 | MS.gene23573:intron | 40.0% |
| ! | ATCTTTTGCCCTTAGGAGTT+AGG | - | chr8.4:61138158-61138177 | None:intergenic | 40.0% |
| ! | CAATTTGCTTGAAGAGCTTC+AGG | - | chr8.4:61138722-61138741 | None:intergenic | 40.0% |
| ! | CCTTTTCCCAAATGCAGATA+AGG | + | chr8.4:61139759-61139778 | MS.gene23573:CDS | 40.0% |
| ! | GATGGGTCAAACCAAGTTTT+TGG | - | chr8.4:61139466-61139485 | None:intergenic | 40.0% |
| !! | TGATTTTGTAGCGGTGGATT+AGG | + | chr8.4:61137548-61137567 | MS.gene23573:intron | 40.0% |
| !!! | AGACGGATTTTGATTCTGCA+CGG | - | chr8.4:61140422-61140441 | None:intergenic | 40.0% |
| !!! | ATGTGCTAGTTTTGGATTGG+TGG | - | chr8.4:61139915-61139934 | None:intergenic | 40.0% |
| !!! | GATGTTAGTTTTGGGCGTAA+TGG | + | chr8.4:61137467-61137486 | MS.gene23573:intron | 40.0% |
| AACATTACAGTGTGCCACCA+TGG | - | chr8.4:61139880-61139899 | None:intergenic | 45.0% | |
| AGCATTGCAGAGAGGGTAAA+AGG | + | chr8.4:61139602-61139621 | MS.gene23573:intron | 45.0% | |
| AGCTAGGCAGACTCAAATGA+TGG | - | chr8.4:61139484-61139503 | None:intergenic | 45.0% | |
| AGGCTTGTAAGTAACGAGCT+TGG | - | chr8.4:61136938-61136957 | None:intergenic | 45.0% | |
| AGTCCTCCCATTCGAAAATC+CGG | + | chr8.4:61139076-61139095 | MS.gene23573:intron | 45.0% | |
| CAGTAGTCATTGGTGAAGCT+AGG | - | chr8.4:61138797-61138816 | None:intergenic | 45.0% | |
| CTAGCTTCACCAATGACTAC+TGG | + | chr8.4:61138795-61138814 | MS.gene23573:CDS | 45.0% | |
| CTTCTCCATAGTAGCCATCT+TGG | - | chr8.4:61139513-61139532 | None:intergenic | 45.0% | |
| GCAATTGGGAGTGACTTGAA+TGG | + | chr8.4:61137816-61137835 | MS.gene23573:intron | 45.0% | |
| GCTAGGCAGACTCAAATGAT+GGG | - | chr8.4:61139483-61139502 | None:intergenic | 45.0% | |
| GTCTTGAGTCCTAACTCCTA+AGG | + | chr8.4:61138146-61138165 | MS.gene23573:intron | 45.0% | |
| TCTTCAAGAGAAGCTTGGGA+GGG | + | chr8.4:61138186-61138205 | MS.gene23573:intron | 45.0% | |
| TGGCATCTTGATAGAGCAAG+AGG | - | chr8.4:61138681-61138700 | None:intergenic | 45.0% | |
| TTCTTCAAGAGAAGCTTGGG+AGG | + | chr8.4:61138185-61138204 | MS.gene23573:intron | 45.0% | |
| ! | AAGACCTGATTTTGTAGCGG+TGG | + | chr8.4:61137542-61137561 | MS.gene23573:intron | 45.0% |
| ! | AATCCGGATTTTCGAATGGG+AGG | - | chr8.4:61139082-61139101 | None:intergenic | 45.0% |
| ! | ACTAGCAAGCAAGCTTTGGT+TGG | - | chr8.4:61137727-61137746 | None:intergenic | 45.0% |
| ! | GCGTTAAGCCGGAATTGTTT+TGG | - | chr8.4:61136901-61136920 | None:intergenic | 45.0% |
| ! | GCTTTCAACTACTCTGAAGG+TGG | + | chr8.4:61136812-61136831 | MS.gene23573:CDS | 45.0% |
| ACCCTCTCTGCAATGCTTCT+AGG | - | chr8.4:61139599-61139618 | None:intergenic | 50.0% | |
| AGCTTGGGAGGGTCTTTGAT+TGG | + | chr8.4:61138197-61138216 | MS.gene23573:intron | 50.0% | |
| ATCTTGGAGTGTGATCCGAG+TGG | - | chr8.4:61137450-61137469 | None:intergenic | 50.0% | |
| CCCTCTCTGCAATGCTTCTA+GGG | - | chr8.4:61139598-61139617 | None:intergenic | 50.0% | |
| GCCATCTTGGAAGAAGAGCT+AGG | - | chr8.4:61139500-61139519 | None:intergenic | 50.0% | |
| TGAACGATACCGCGTTAAGC+CGG | - | chr8.4:61136912-61136931 | None:intergenic | 50.0% | |
| ! | GCCTAGCTCTTCTTCCAAGA+TGG | + | chr8.4:61139496-61139515 | MS.gene23573:CDS | 50.0% |
| ! | GTGAGTGGCAAAGCCTCTTT+TGG | - | chr8.4:61139576-61139595 | None:intergenic | 50.0% |
| !! | ACCCTAGAAGCATTGCAGAG+AGG | + | chr8.4:61139594-61139613 | MS.gene23573:CDS | 50.0% |
| !! | AGTGCTAGTTTGCTGCCAAG+AGG | - | chr8.4:61140000-61140019 | None:intergenic | 50.0% |
| !! | CACGATGACACCCTGCTTTT+TGG | + | chr8.4:61139824-61139843 | MS.gene23573:intron | 50.0% |
| !! | CCCTAGAAGCATTGCAGAGA+GGG | + | chr8.4:61139595-61139614 | MS.gene23573:CDS | 50.0% |
| !! | GTGCTAGTTTGCTGCCAAGA+GGG | - | chr8.4:61139999-61140018 | None:intergenic | 50.0% |
| !! | TGCAATGCTTCTAGGGTGAG+TGG | - | chr8.4:61139591-61139610 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 61136791 | 61140584 | 61136791 | ID=MS.gene23573 |
| chr8.4 | mRNA | 61136791 | 61140584 | 61136791 | ID=MS.gene23573.t1;Parent=MS.gene23573 |
| chr8.4 | exon | 61136791 | 61136974 | 61136791 | ID=MS.gene23573.t1.exon1;Parent=MS.gene23573.t1 |
| chr8.4 | CDS | 61136791 | 61136974 | 61136791 | ID=cds.MS.gene23573.t1;Parent=MS.gene23573.t1 |
| chr8.4 | exon | 61137050 | 61137316 | 61137050 | ID=MS.gene23573.t1.exon2;Parent=MS.gene23573.t1 |
| chr8.4 | CDS | 61137050 | 61137316 | 61137050 | ID=cds.MS.gene23573.t1;Parent=MS.gene23573.t1 |
| chr8.4 | exon | 61138585 | 61138907 | 61138585 | ID=MS.gene23573.t1.exon3;Parent=MS.gene23573.t1 |
| chr8.4 | CDS | 61138585 | 61138907 | 61138585 | ID=cds.MS.gene23573.t1;Parent=MS.gene23573.t1 |
| chr8.4 | exon | 61139446 | 61139616 | 61139446 | ID=MS.gene23573.t1.exon4;Parent=MS.gene23573.t1 |
| chr8.4 | CDS | 61139446 | 61139616 | 61139446 | ID=cds.MS.gene23573.t1;Parent=MS.gene23573.t1 |
| chr8.4 | exon | 61139715 | 61139780 | 61139715 | ID=MS.gene23573.t1.exon5;Parent=MS.gene23573.t1 |
| chr8.4 | CDS | 61139715 | 61139780 | 61139715 | ID=cds.MS.gene23573.t1;Parent=MS.gene23573.t1 |
| chr8.4 | exon | 61140008 | 61140076 | 61140008 | ID=MS.gene23573.t1.exon6;Parent=MS.gene23573.t1 |
| chr8.4 | CDS | 61140008 | 61140076 | 61140008 | ID=cds.MS.gene23573.t1;Parent=MS.gene23573.t1 |
| chr8.4 | exon | 61140540 | 61140584 | 61140540 | ID=MS.gene23573.t1.exon7;Parent=MS.gene23573.t1 |
| chr8.4 | CDS | 61140540 | 61140584 | 61140540 | ID=cds.MS.gene23573.t1;Parent=MS.gene23573.t1 |
| Gene Sequence |
| Protein sequence |
