Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056298.t1 | XP_024628123.1 | 93.9 | 407 | 21 | 2 | 1 | 406 | 1 | 404 | 4.60E-218 | 766.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056298.t1 | O81816 | 55.0 | 400 | 174 | 2 | 10 | 405 | 8 | 405 | 2.2e-123 | 443.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056298.t1 | A0A396K3F5 | 93.9 | 407 | 21 | 2 | 1 | 406 | 1 | 404 | 3.3e-218 | 766.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053420 | MS.gene056298 | 0.809006 | 2.34E-50 | -1.69E-46 |
| MS.gene055139 | MS.gene056298 | 0.817873 | 2.63E-52 | -1.69E-46 |
| MS.gene055202 | MS.gene056298 | 0.805298 | 1.43E-49 | -1.69E-46 |
| MS.gene056218 | MS.gene056298 | 0.805606 | 1.23E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene058108 | 0.834137 | 3.57E-56 | -1.69E-46 |
| MS.gene056298 | MS.gene058109 | 0.815241 | 1.02E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene058171 | 0.828075 | 1.10E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene058173 | 0.82758 | 1.45E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene058175 | 0.828657 | 7.96E-55 | -1.69E-46 |
| MS.gene056298 | MS.gene062005 | 0.826438 | 2.71E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene063062 | 0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene056298 | MS.gene065012 | 0.913874 | 3.71E-84 | -1.69E-46 |
| MS.gene056298 | MS.gene068633 | 0.821175 | 4.64E-53 | -1.69E-46 |
| MS.gene056298 | MS.gene069095 | 0.825713 | 4.03E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene069166 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene069874 | 0.846163 | 2.58E-59 | -1.69E-46 |
| MS.gene056298 | MS.gene070468 | 0.804546 | 2.05E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene071843 | 0.825599 | 4.29E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene073035 | 0.825037 | 5.83E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene07329 | -0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene056298 | MS.gene073868 | 0.814289 | 1.66E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene20878 | -0.825151 | 5.48E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene21757 | 0.801437 | 9.01E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene21867 | 0.806278 | 8.89E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene21868 | 0.8386 | 2.61E-57 | -1.69E-46 |
| MS.gene056298 | MS.gene21870 | 0.818587 | 1.81E-52 | -1.69E-46 |
| MS.gene056298 | MS.gene22681 | 0.803561 | 3.29E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene23573 | 0.816496 | 5.37E-52 | -1.69E-46 |
| MS.gene056298 | MS.gene24272 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene27779 | 0.801227 | 9.95E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene32652 | -0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene056298 | MS.gene34140 | 0.804732 | 1.88E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene38094 | 0.816331 | 5.84E-52 | -1.69E-46 |
| MS.gene056298 | MS.gene38095 | 0.803883 | 2.82E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene38097 | 0.81344 | 2.56E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene38155 | 0.812251 | 4.66E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene38172 | 0.824619 | 7.32E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene38435 | 0.80189 | 7.27E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene44721 | 0.806617 | 7.54E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene44722 | 0.804188 | 2.44E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene46057 | 0.807434 | 5.06E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene46106 | 0.806524 | 7.89E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene51735 | 0.80669 | 7.28E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene54409 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene54410 | 0.805219 | 1.48E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene54411 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene55697 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene56384 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene57718 | 0.855844 | 4.80E-62 | -1.69E-46 |
| MS.gene056298 | MS.gene59001 | 0.801103 | 1.05E-48 | -1.69E-46 |
| MS.gene056298 | MS.gene59003 | 0.816516 | 5.31E-52 | -1.69E-46 |
| MS.gene056298 | MS.gene61143 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene65822 | 0.810732 | 9.96E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene73688 | 0.805538 | 1.27E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene75393 | 0.80635 | 8.58E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene75472 | 0.801954 | 7.05E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene76539 | 0.833629 | 4.78E-56 | -1.69E-46 |
| MS.gene056298 | MS.gene79221 | 0.810025 | 1.42E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene80744 | 0.812768 | 3.59E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene80904 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene80998 | 0.805368 | 1.38E-49 | -1.69E-46 |
| MS.gene056298 | MS.gene82917 | -0.806794 | 6.92E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene85154 | 0.840012 | 1.12E-57 | -1.69E-46 |
| MS.gene056298 | MS.gene91973 | 0.816779 | 4.64E-52 | -1.69E-46 |
| MS.gene056298 | MS.gene91976 | 0.824747 | 6.83E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene91977 | 0.829858 | 4.07E-55 | -1.69E-46 |
| MS.gene056298 | MS.gene93265 | -0.815051 | 1.13E-51 | -1.69E-46 |
| MS.gene056298 | MS.gene94623 | -0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene056298 | MS.gene97125 | 0.825677 | 4.12E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056298.t1 | MTR_1g112780 | 94.802 | 404 | 17 | 2 | 1 | 403 | 1 | 401 | 0.0 | 765 |
| MS.gene056298.t1 | MTR_1g112780 | 78.283 | 396 | 81 | 3 | 15 | 405 | 401 | 796 | 0.0 | 588 |
| MS.gene056298.t1 | MTR_1g090667 | 76.049 | 405 | 89 | 2 | 6 | 405 | 4 | 405 | 0.0 | 624 |
| MS.gene056298.t1 | MTR_1g112740 | 79.250 | 400 | 79 | 2 | 7 | 405 | 1 | 397 | 0.0 | 620 |
| MS.gene056298.t1 | MTR_1g112750 | 74.201 | 407 | 101 | 3 | 1 | 405 | 1 | 405 | 0.0 | 558 |
| MS.gene056298.t1 | MTR_5g013260 | 42.636 | 387 | 210 | 5 | 2 | 386 | 37 | 413 | 3.39e-99 | 302 |
| MS.gene056298.t1 | MTR_5g013250 | 40.049 | 407 | 229 | 6 | 4 | 406 | 35 | 430 | 5.78e-96 | 294 |
| MS.gene056298.t1 | MTR_4g035655 | 36.145 | 415 | 230 | 9 | 8 | 406 | 481 | 876 | 4.22e-73 | 245 |
| MS.gene056298.t1 | MTR_4g035655 | 37.730 | 326 | 192 | 4 | 7 | 326 | 5 | 325 | 3.11e-65 | 224 |
| MS.gene056298.t1 | MTR_5g017350 | 28.800 | 375 | 239 | 10 | 11 | 370 | 78 | 439 | 9.86e-18 | 85.5 |
| MS.gene056298.t1 | MTR_5g017350 | 28.385 | 384 | 247 | 10 | 2 | 370 | 69 | 439 | 1.12e-17 | 85.1 |
| MS.gene056298.t1 | MTR_5g017350 | 28.385 | 384 | 247 | 10 | 2 | 370 | 69 | 439 | 1.94e-17 | 84.7 |
| MS.gene056298.t1 | MTR_5g017350 | 28.385 | 384 | 247 | 10 | 2 | 370 | 69 | 439 | 1.97e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056298.t1 | AT5G05320 | 54.115 | 401 | 178 | 2 | 9 | 406 | 7 | 404 | 2.24e-157 | 449 |
| MS.gene056298.t1 | AT4G38540 | 56.250 | 400 | 169 | 2 | 10 | 405 | 8 | 405 | 1.68e-148 | 427 |
| MS.gene056298.t1 | AT2G35660 | 39.702 | 403 | 226 | 7 | 8 | 405 | 44 | 434 | 8.36e-90 | 278 |
| MS.gene056298.t1 | AT2G29720 | 37.466 | 371 | 219 | 5 | 21 | 389 | 55 | 414 | 4.34e-80 | 253 |
| MS.gene056298.t1 | AT4G15760 | 33.915 | 401 | 234 | 6 | 19 | 405 | 39 | 422 | 2.36e-71 | 230 |
| MS.gene056298.t1 | AT4G15760 | 33.661 | 407 | 239 | 7 | 19 | 405 | 39 | 434 | 3.43e-70 | 228 |
| MS.gene056298.t1 | AT2G35660 | 37.346 | 324 | 187 | 6 | 87 | 405 | 8 | 320 | 1.90e-63 | 207 |
| MS.gene056298.t1 | AT2G35660 | 37.346 | 324 | 187 | 6 | 87 | 405 | 8 | 320 | 1.90e-63 | 207 |
| MS.gene056298.t1 | AT4G15765 | 30.769 | 299 | 167 | 5 | 8 | 304 | 3 | 263 | 4.13e-39 | 141 |
| MS.gene056298.t1 | AT4G15765 | 30.120 | 166 | 116 | 0 | 139 | 304 | 25 | 190 | 5.26e-25 | 101 |
| MS.gene056298.t1 | AT4G15765 | 30.120 | 166 | 116 | 0 | 139 | 304 | 25 | 190 | 5.26e-25 | 101 |
| MS.gene056298.t1 | AT4G15765 | 30.120 | 166 | 116 | 0 | 139 | 304 | 25 | 190 | 5.26e-25 | 101 |
| MS.gene056298.t1 | AT4G15765 | 30.120 | 166 | 116 | 0 | 139 | 304 | 25 | 190 | 5.26e-25 | 101 |
Find 98 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAACATATACATCTTTA+TGG | 0.152913 | 1.3:-76552876 | MS.gene056298:CDS |
| CTGGATTTGCTTTAGGAATA+TGG | 0.163806 | 1.3:-76552950 | MS.gene056298:CDS |
| GTGACTACTTCTTTGATTAC+AGG | 0.261068 | 1.3:-76552707 | MS.gene056298:CDS |
| TCCTCCTCTTCTTCTTCCTT+TGG | 0.266684 | 1.3:+76551154 | None:intergenic |
| TCAGCAGGCTGATTCAAAAT+TGG | 0.284136 | 1.3:-76551032 | MS.gene056298:CDS |
| GTCATGAGAAAGGTGTTTAC+TGG | 0.295235 | 1.3:-76552041 | MS.gene056298:CDS |
| AAAATACTACATCTTGTTGA+TGG | 0.306705 | 1.3:-76552400 | MS.gene056298:CDS |
| ATTACTACAGCTTATATTGC+AGG | 0.323766 | 1.3:-76551061 | MS.gene056298:CDS |
| AGAGTAACTGGATTTGCTTT+AGG | 0.343106 | 1.3:-76552957 | MS.gene056298:CDS |
| GTAATTGAAAAGGTATTGAT+AGG | 0.347467 | 1.3:-76552231 | MS.gene056298:intron |
| AAAGGAAATGTTTGTGTTGC+TGG | 0.349120 | 1.3:-76551283 | MS.gene056298:CDS |
| ATTGTGGGAGCTGGAATTGC+TGG | 0.349361 | 1.3:-76553178 | MS.gene056298:CDS |
| TCAGACGCATTGAGAGTAAC+TGG | 0.350706 | 1.3:-76552969 | MS.gene056298:CDS |
| CAGGTTAGGTGTAAGAAGTT+TGG | 0.359561 | 1.3:-76553003 | MS.gene056298:CDS |
| ATACAGGTAGATATGGAATC+AGG | 0.371596 | 1.3:-76552152 | MS.gene056298:CDS |
| ACATCCTTGGGAGCTCATAA+TGG | 0.372312 | 1.3:-76551317 | MS.gene056298:CDS |
| GGGTGTTGTGCTTTAGAGGA+TGG | 0.372973 | 1.3:-76551220 | MS.gene056298:CDS |
| GTTGTTGCTATAGAGGAATC+TGG | 0.376223 | 1.3:-76552430 | MS.gene056298:CDS |
| TGGATTTGCTTTAGGAATAT+GGG | 0.376418 | 1.3:-76552949 | MS.gene056298:CDS |
| GTCAAAAGTTGTTGCTATAG+AGG | 0.386849 | 1.3:-76552437 | MS.gene056298:CDS |
| GGTGTTGTGCTTTAGAGGAT+GGG | 0.387261 | 1.3:-76551219 | MS.gene056298:CDS |
| GCCACTTATACAGGTAGATA+TGG | 0.388353 | 1.3:-76552159 | MS.gene056298:CDS |
| TGCAAAGTGGTTAGGCTTCA+AGG | 0.404806 | 1.3:-76552184 | MS.gene056298:CDS |
| CACCCCATGACACCTGATCT+TGG | 0.406255 | 1.3:-76551250 | MS.gene056298:CDS |
| ACATATTGCTTCAGTTTAGC+AGG | 0.408723 | 1.3:+76551433 | None:intergenic |
| CCTATGCTTATGCAGTTCTA+TGG | 0.418184 | 1.3:-76552093 | MS.gene056298:CDS |
| ACAAACATATACATCTTTAT+GGG | 0.420565 | 1.3:-76552875 | MS.gene056298:intron |
| TTCAAGGAGGCCACTTATAC+AGG | 0.423975 | 1.3:-76552168 | MS.gene056298:CDS |
| GGTGCCATTCGGAAGTTCAT+TGG | 0.425941 | 1.3:+76552471 | None:intergenic |
| GTGTTGTGCTTTAGAGGATG+GGG | 0.426399 | 1.3:-76551218 | MS.gene056298:CDS |
| GATGTATATGTTTGTGGCGG+AGG | 0.427623 | 1.3:+76552883 | None:intergenic |
| TGTTAGAAGGAAGTTATTGT+TGG | 0.429771 | 1.3:-76552503 | MS.gene056298:CDS |
| GCTGGCCTTACTACTGCCTT+AGG | 0.433010 | 1.3:-76553160 | MS.gene056298:CDS |
| TGTTGCAGATAAGGAGCTAA+TGG | 0.435214 | 1.3:-76551461 | MS.gene056298:intron |
| ATGATAGATCTAACATTACT+TGG | 0.440226 | 1.3:+76551388 | None:intergenic |
| AGGTGTAAGAAGTTTGGTAT+TGG | 0.442419 | 1.3:-76552997 | MS.gene056298:CDS |
| TCTGTGGTTGCAAAGTGGTT+AGG | 0.443344 | 1.3:-76552192 | MS.gene056298:CDS |
| GGTCAACTATTCAAGAAGTC+TGG | 0.446062 | 1.3:-76550968 | MS.gene056298:CDS |
| CATCCTTGGGAGCTCATAAT+GGG | 0.446436 | 1.3:-76551316 | MS.gene056298:CDS |
| TATTGCAGGTGTTATTCAGC+AGG | 0.452920 | 1.3:-76551047 | MS.gene056298:CDS |
| GTGAACTACGTAGTGTTAGA+AGG | 0.459820 | 1.3:-76552516 | MS.gene056298:CDS |
| TAGGAATATGGGAAAATGCT+TGG | 0.459941 | 1.3:-76552938 | MS.gene056298:CDS |
| CATAAAGATGTATATGTTTG+TGG | 0.466768 | 1.3:+76552877 | None:intergenic |
| TGAAGAAGATGTTGTGATTG+TGG | 0.469831 | 1.3:-76553194 | MS.gene056298:CDS |
| CATTGAGATATAGACATCCT+TGG | 0.475442 | 1.3:-76551330 | MS.gene056298:CDS |
| AACTTCCGAATGGCACCATT+AGG | 0.475545 | 1.3:-76552465 | MS.gene056298:CDS |
| TCCATATCTACCTGTATAAG+TGG | 0.491527 | 1.3:+76552158 | None:intergenic |
| GATGTTGTGATTGTGGGAGC+TGG | 0.492828 | 1.3:-76553187 | MS.gene056298:CDS |
| ACCAAAGGAAGAAGAAGAGG+AGG | 0.497219 | 1.3:-76551155 | MS.gene056298:CDS |
| GCCTTGGATGCTGTTGGTGT+TGG | 0.497974 | 1.3:-76552912 | MS.gene056298:CDS |
| ATTGAGATATAGACATCCTT+GGG | 0.500029 | 1.3:-76551329 | MS.gene056298:CDS |
| TGACCAAGATCAGGTGTCAT+GGG | 0.504386 | 1.3:+76551247 | None:intergenic |
| GGAGAAATACAAAAGAATTG+AGG | 0.506282 | 1.3:-76551134 | MS.gene056298:CDS |
| TTGTGCTTTAGAGGATGGGG+TGG | 0.506803 | 1.3:-76551215 | MS.gene056298:CDS |
| AAAACCAAAGGAAGAAGAAG+AGG | 0.509176 | 1.3:-76551158 | MS.gene056298:CDS |
| CTTATGCAGTTCTATGGCAA+AGG | 0.512905 | 1.3:-76552087 | MS.gene056298:CDS |
| TATATCTCAATGGAGCTGAA+TGG | 0.513754 | 1.3:+76551341 | None:intergenic |
| CAAGGATGTCTATATCTCAA+TGG | 0.515761 | 1.3:+76551331 | None:intergenic |
| TGGAAAGCCTTGGATGCTGT+TGG | 0.518048 | 1.3:-76552918 | MS.gene056298:CDS |
| AGAAATATGCAAATGAAAGA+AGG | 0.528360 | 1.3:-76551102 | MS.gene056298:CDS |
| GGAAAATGCTTGGAAAGCCT+TGG | 0.529652 | 1.3:-76552928 | MS.gene056298:CDS |
| GGGAATTGACCTTGGGTGGT+AGG | 0.531430 | 1.3:+76552003 | None:intergenic |
| GAAGAAGATGTTGTGATTGT+GGG | 0.532692 | 1.3:-76553193 | MS.gene056298:CDS |
| TTGACCAAGATCAGGTGTCA+TGG | 0.539777 | 1.3:+76551246 | None:intergenic |
| ATGTACCTAATGGTGCCATT+CGG | 0.542214 | 1.3:+76552460 | None:intergenic |
| CATTCGGAAGTTCATTGGCA+AGG | 0.543968 | 1.3:+76552476 | None:intergenic |
| TACAGGTAGATATGGAATCA+GGG | 0.545908 | 1.3:-76552151 | MS.gene056298:CDS |
| GTGGTACCTGTGAAGTCCTA+AGG | 0.549275 | 1.3:+76553144 | None:intergenic |
| AAATACAAAAGAATTGAGGA+AGG | 0.551011 | 1.3:-76551130 | MS.gene056298:CDS |
| GTTGTTCCTTGTCATGAGAA+AGG | 0.552354 | 1.3:-76552051 | MS.gene056298:CDS |
| ATTCGGAAGTTCATTGGCAA+GGG | 0.557741 | 1.3:+76552477 | None:intergenic |
| TCCAACACCAACAGCATCCA+AGG | 0.559236 | 1.3:+76552911 | None:intergenic |
| AATATGCAAATGAAAGAAGG+TGG | 0.560710 | 1.3:-76551099 | MS.gene056298:CDS |
| AATAGTTGACCAGCTAGTAA+TGG | 0.561620 | 1.3:+76550980 | None:intergenic |
| TTTCCCATTATGAGCTCCCA+AGG | 0.564495 | 1.3:+76551313 | None:intergenic |
| GAAGTCCTAAGGCAGTAGTA+AGG | 0.567536 | 1.3:+76553155 | None:intergenic |
| ATGACACCTGATCTTGGTCA+AGG | 0.568341 | 1.3:-76551244 | MS.gene056298:CDS |
| CATATTGCTTCAGTTTAGCA+GGG | 0.572399 | 1.3:+76551434 | None:intergenic |
| TGACACCTGATCTTGGTCAA+GGG | 0.574223 | 1.3:-76551243 | MS.gene056298:CDS |
| CTACTGCCTTAGGACTTCAC+AGG | 0.574990 | 1.3:-76553150 | MS.gene056298:intron |
| AAAAGGGAATTGACCTTGGG+TGG | 0.578106 | 1.3:+76551999 | None:intergenic |
| CCATAGAACTGCATAAGCAT+AGG | 0.583126 | 1.3:+76552093 | None:intergenic |
| AAGGTATTGATAGGATGTGA+TGG | 0.586088 | 1.3:-76552222 | MS.gene056298:CDS |
| GACACCTGATCTTGGTCAAG+GGG | 0.603675 | 1.3:-76551242 | MS.gene056298:CDS |
| ATAATGGGAAATATTAGCAA+AGG | 0.604077 | 1.3:-76551301 | MS.gene056298:CDS |
| ACTTGGACTCCTACCACCCA+AGG | 0.609702 | 1.3:-76552012 | MS.gene056298:intron |
| ACAGGTAGATATGGAATCAG+GGG | 0.617290 | 1.3:-76552150 | MS.gene056298:CDS |
| AATACAAAAGAATTGAGGAA+GGG | 0.636762 | 1.3:-76551129 | MS.gene056298:CDS |
| CTTGCCAATGAACTTCCGAA+TGG | 0.638428 | 1.3:-76552475 | MS.gene056298:CDS |
| GACCAAGATCAGGTGTCATG+GGG | 0.638652 | 1.3:+76551248 | None:intergenic |
| TAAACACCTTTCTCATGACA+AGG | 0.641474 | 1.3:+76552045 | None:intergenic |
| CACCTGATCTTGGTCAAGGG+GGG | 0.646163 | 1.3:-76551240 | MS.gene056298:CDS |
| TCAACTCTGTGGTTGCAAAG+TGG | 0.661332 | 1.3:-76552197 | MS.gene056298:CDS |
| ACACCTGATCTTGGTCAAGG+GGG | 0.667732 | 1.3:-76551241 | MS.gene056298:CDS |
| AAAGATGTATATGTTTGTGG+CGG | 0.679762 | 1.3:+76552880 | None:intergenic |
| TGGAACAACCATCAAAACCA+AGG | 0.693752 | 1.3:-76552380 | MS.gene056298:intron |
| ATGTGATGGAATCAACTCTG+TGG | 0.777353 | 1.3:-76552208 | MS.gene056298:CDS |
| AAAGTGGTTAGGCTTCAAGG+AGG | 0.779828 | 1.3:-76552181 | MS.gene056298:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAATTTGTAATTGAAA+AGG | - | chr1.3:76551916-76551935 | MS.gene056298:intron | 10.0% |
| !! | TAATATTAAAAACACTAAGT+TGG | + | chr1.3:76551322-76551341 | None:intergenic | 15.0% |
| !!! | AAAATTGGTTACATTTTTTA+GGG | - | chr1.3:76553140-76553159 | MS.gene056298:intron | 15.0% |
| !!! | CTTTATAAGTCAATTTTATA+GGG | - | chr1.3:76552333-76552352 | MS.gene056298:intron | 15.0% |
| !! | ACAAACATATACATCTTTAT+GGG | - | chr1.3:76551282-76551301 | MS.gene056298:CDS | 20.0% |
| !! | GTAATTCTTGATATATATGT+TGG | + | chr1.3:76551573-76551592 | None:intergenic | 20.0% |
| !! | TTCAACATGCTTAAAAAAAA+GGG | + | chr1.3:76552177-76552196 | None:intergenic | 20.0% |
| !! | TTTCAACATGCTTAAAAAAA+AGG | + | chr1.3:76552178-76552197 | None:intergenic | 20.0% |
| !!! | AAAATTGACTTATAAAGCAA+GGG | + | chr1.3:76552330-76552349 | None:intergenic | 20.0% |
| !!! | ATCTATAAAATTGACTTGTA+AGG | + | chr1.3:76552556-76552575 | None:intergenic | 20.0% |
| !!! | ATTTTTTAGGGACAAAATTT+TGG | - | chr1.3:76553152-76553171 | MS.gene056298:CDS | 20.0% |
| !!! | CAAAATTGGTTACATTTTTT+AGG | - | chr1.3:76553139-76553158 | MS.gene056298:intron | 20.0% |
| !!! | CTTATTTCTTAACACTTTTT+AGG | + | chr1.3:76552510-76552529 | None:intergenic | 20.0% |
| !!! | GCTTTATAAGTCAATTTTAT+AGG | - | chr1.3:76552332-76552351 | MS.gene056298:intron | 20.0% |
| !!! | TAAAATTGACTTATAAAGCA+AGG | + | chr1.3:76552331-76552350 | None:intergenic | 20.0% |
| ! | AAAATACTACATCTTGTTGA+TGG | - | chr1.3:76551757-76551776 | MS.gene056298:intron | 25.0% |
| ! | AAATACAAAAGAATTGAGGA+AGG | - | chr1.3:76553027-76553046 | MS.gene056298:intron | 25.0% |
| ! | AATACAAAAGAATTGAGGAA+GGG | - | chr1.3:76553028-76553047 | MS.gene056298:intron | 25.0% |
| ! | AGAAATATGCAAATGAAAGA+AGG | - | chr1.3:76553055-76553074 | MS.gene056298:intron | 25.0% |
| ! | ATGATAGATCTAACATTACT+TGG | + | chr1.3:76552772-76552791 | None:intergenic | 25.0% |
| ! | CAAAGAAACTTCTTAAAATG+TGG | + | chr1.3:76552595-76552614 | None:intergenic | 25.0% |
| ! | CACAAACATATACATCTTTA+TGG | - | chr1.3:76551281-76551300 | MS.gene056298:CDS | 25.0% |
| ! | CATAAAGATGTATATGTTTG+TGG | + | chr1.3:76551283-76551302 | None:intergenic | 25.0% |
| ! | CTTAATACAAGCAACAAATA+AGG | + | chr1.3:76552229-76552248 | None:intergenic | 25.0% |
| ! | TACATATTCCTTATTATCGA+TGG | - | chr1.3:76551131-76551150 | MS.gene056298:CDS | 25.0% |
| ! | TGAAGAGAATAGAATTGAAA+AGG | + | chr1.3:76551042-76551061 | None:intergenic | 25.0% |
| ! | TTGATGAATTAACATGACAA+TGG | + | chr1.3:76552667-76552686 | None:intergenic | 25.0% |
| !! | AATTAGCAACTATGTCTTTT+AGG | - | chr1.3:76551478-76551497 | MS.gene056298:intron | 25.0% |
| !! | ATAATGGGAAATATTAGCAA+AGG | - | chr1.3:76552856-76552875 | MS.gene056298:intron | 25.0% |
| !! | ATTAGCAACTATGTCTTTTA+GGG | - | chr1.3:76551479-76551498 | MS.gene056298:intron | 25.0% |
| !! | TGAAACTAAAGTACTTGAAT+CGG | - | chr1.3:76551417-76551436 | MS.gene056298:CDS | 25.0% |
| !!! | GTAATTGAAAAGGTATTGAT+AGG | - | chr1.3:76551926-76551945 | MS.gene056298:intron | 25.0% |
| AAAAAAAAGGGAATTGACCT+TGG | + | chr1.3:76552165-76552184 | None:intergenic | 30.0% | |
| AAAAAAAGGGAATTGACCTT+GGG | + | chr1.3:76552164-76552183 | None:intergenic | 30.0% | |
| AAAGATGTATATGTTTGTGG+CGG | + | chr1.3:76551280-76551299 | None:intergenic | 30.0% | |
| AATAGAATTGAAAAGGTAGG+TGG | + | chr1.3:76551035-76551054 | None:intergenic | 30.0% | |
| AATATGCAAATGAAAGAAGG+TGG | - | chr1.3:76553058-76553077 | MS.gene056298:intron | 30.0% | |
| ACTATCTTCGAATTTGGATT+TGG | + | chr1.3:76552369-76552388 | None:intergenic | 30.0% | |
| ATTACTACAGCTTATATTGC+AGG | - | chr1.3:76553096-76553115 | MS.gene056298:intron | 30.0% | |
| ATTGAGATATAGACATCCTT+GGG | - | chr1.3:76552828-76552847 | MS.gene056298:intron | 30.0% | |
| GAGAATAGAATTGAAAAGGT+AGG | + | chr1.3:76551038-76551057 | None:intergenic | 30.0% | |
| GGAGAAATACAAAAGAATTG+AGG | - | chr1.3:76553023-76553042 | MS.gene056298:intron | 30.0% | |
| GTACCAAATCGAACAAAATA+TGG | - | chr1.3:76552262-76552281 | MS.gene056298:intron | 30.0% | |
| GTCACAAATATTGTTTACCT+TGG | + | chr1.3:76551797-76551816 | None:intergenic | 30.0% | |
| TCTGATACTATCTTCGAATT+TGG | + | chr1.3:76552375-76552394 | None:intergenic | 30.0% | |
| TGTTAGAAGGAAGTTATTGT+TGG | - | chr1.3:76551654-76551673 | MS.gene056298:intron | 30.0% | |
| TTCAATAACATGTGCTTCAA+CGG | + | chr1.3:76552411-76552430 | None:intergenic | 30.0% | |
| ! | AACTTTTGACATGTACCTAA+TGG | + | chr1.3:76551710-76551729 | None:intergenic | 30.0% |
| ! | AAGTGTCTCTAGAAAAAAGA+AGG | + | chr1.3:76552307-76552326 | None:intergenic | 30.0% |
| ! | GAAACTAAAGTACTTGAATC+GGG | - | chr1.3:76551418-76551437 | MS.gene056298:CDS | 30.0% |
| ! | TGACCATATTTTGTTCGATT+TGG | + | chr1.3:76552268-76552287 | None:intergenic | 30.0% |
| !! | TGGATTTGCTTTAGGAATAT+GGG | - | chr1.3:76551208-76551227 | MS.gene056298:CDS | 30.0% |
| !!! | ATTGTTTACCTTGGTTTTGA+TGG | + | chr1.3:76551788-76551807 | None:intergenic | 30.0% |
| !!! | TTCTTCTTCCTTTGGTTTTT+TGG | + | chr1.3:76552998-76553017 | None:intergenic | 30.0% |
| AAAACCAAAGGAAGAAGAAG+AGG | - | chr1.3:76552999-76553018 | MS.gene056298:CDS | 35.0% | |
| AAAGGAAATGTTTGTGTTGC+TGG | - | chr1.3:76552874-76552893 | MS.gene056298:intron | 35.0% | |
| AATAGTTGACCAGCTAGTAA+TGG | + | chr1.3:76553180-76553199 | None:intergenic | 35.0% | |
| ACATATTGCTTCAGTTTAGC+AGG | + | chr1.3:76552727-76552746 | None:intergenic | 35.0% | |
| AGGTGTAAGAAGTTTGGTAT+TGG | - | chr1.3:76551160-76551179 | MS.gene056298:CDS | 35.0% | |
| ATACAGGTAGATATGGAATC+AGG | - | chr1.3:76552005-76552024 | MS.gene056298:intron | 35.0% | |
| CAAGGATGTCTATATCTCAA+TGG | + | chr1.3:76552829-76552848 | None:intergenic | 35.0% | |
| CATATTGCTTCAGTTTAGCA+GGG | + | chr1.3:76552726-76552745 | None:intergenic | 35.0% | |
| CATTGAGATATAGACATCCT+TGG | - | chr1.3:76552827-76552846 | MS.gene056298:intron | 35.0% | |
| GAAGAAGATGTTGTGATTGT+GGG | - | chr1.3:76550964-76550983 | MS.gene056298:CDS | 35.0% | |
| GTCAAAAGTTGTTGCTATAG+AGG | - | chr1.3:76551720-76551739 | MS.gene056298:intron | 35.0% | |
| GTGACTACTTCTTTGATTAC+AGG | - | chr1.3:76551450-76551469 | MS.gene056298:CDS | 35.0% | |
| TAAAATGTTCAGTCCTAAGG+AGG | - | chr1.3:76552448-76552467 | MS.gene056298:CDS | 35.0% | |
| TAAACACCTTTCTCATGACA+AGG | + | chr1.3:76552115-76552134 | None:intergenic | 35.0% | |
| TACAGGTAGATATGGAATCA+GGG | - | chr1.3:76552006-76552025 | MS.gene056298:intron | 35.0% | |
| TAGGAATATGGGAAAATGCT+TGG | - | chr1.3:76551219-76551238 | MS.gene056298:CDS | 35.0% | |
| TATATCTCAATGGAGCTGAA+TGG | + | chr1.3:76552819-76552838 | None:intergenic | 35.0% | |
| TATTCCTTATTATCGATGGC+AGG | - | chr1.3:76551135-76551154 | MS.gene056298:CDS | 35.0% | |
| TCCATATCTACCTGTATAAG+TGG | + | chr1.3:76552002-76552021 | None:intergenic | 35.0% | |
| TGAAGAAGATGTTGTGATTG+TGG | - | chr1.3:76550963-76550982 | MS.gene056298:CDS | 35.0% | |
| TTCATTGTTTCGATCCAGAA+TGG | - | chr1.3:76552203-76552222 | MS.gene056298:CDS | 35.0% | |
| ! | AGAGTAACTGGATTTGCTTT+AGG | - | chr1.3:76551200-76551219 | MS.gene056298:CDS | 35.0% |
| ! | GATTCTTGTTATGATGAGTG+TGG | - | chr1.3:76551601-76551620 | MS.gene056298:intron | 35.0% |
| !! | AAGGTATTGATAGGATGTGA+TGG | - | chr1.3:76551935-76551954 | MS.gene056298:intron | 35.0% |
| !! | ACTATGTCTTTTAGGGACAA+AGG | - | chr1.3:76551486-76551505 | MS.gene056298:intron | 35.0% |
| !! | CTCTAAAATGTTCAGTCCTA+AGG | - | chr1.3:76552445-76552464 | MS.gene056298:CDS | 35.0% |
| !! | CTGGATTTGCTTTAGGAATA+TGG | - | chr1.3:76551207-76551226 | MS.gene056298:CDS | 35.0% |
| !!! | AAGAAGTCTGGTTTTGATTG+TGG | - | chr1.3:76553201-76553220 | MS.gene056298:CDS | 35.0% |
| !!! | GTGTTTACTGGTTTTTCACT+TGG | - | chr1.3:76552128-76552147 | MS.gene056298:CDS | 35.0% |
| !!! | TTCCTTTGGTTTTTTGGACA+AGG | + | chr1.3:76552992-76553011 | None:intergenic | 35.0% |
| ACAGGTAGATATGGAATCAG+GGG | - | chr1.3:76552007-76552026 | MS.gene056298:intron | 40.0% | |
| AGCAACAAATAAGGCCATTC+TGG | + | chr1.3:76552220-76552239 | None:intergenic | 40.0% | |
| ATTCGGAAGTTCATTGGCAA+GGG | + | chr1.3:76551683-76551702 | None:intergenic | 40.0% | |
| CAGGTTAGGTGTAAGAAGTT+TGG | - | chr1.3:76551154-76551173 | MS.gene056298:CDS | 40.0% | |
| CCATAGAACTGCATAAGCAT+AGG | + | chr1.3:76552067-76552086 | None:intergenic | 40.0% | |
| CCTATGCTTATGCAGTTCTA+TGG | - | chr1.3:76552064-76552083 | MS.gene056298:CDS | 40.0% | |
| CTAACCTGCCATCGATAATA+AGG | + | chr1.3:76551142-76551161 | None:intergenic | 40.0% | |
| CTTATGCAGTTCTATGGCAA+AGG | - | chr1.3:76552070-76552089 | MS.gene056298:CDS | 40.0% | |
| CTTATTATCGATGGCAGGTT+AGG | - | chr1.3:76551140-76551159 | MS.gene056298:CDS | 40.0% | |
| GCCACTTATACAGGTAGATA+TGG | - | chr1.3:76551998-76552017 | MS.gene056298:intron | 40.0% | |
| GGTCAACTATTCAAGAAGTC+TGG | - | chr1.3:76553189-76553208 | MS.gene056298:CDS | 40.0% | |
| GTGAACTACGTAGTGTTAGA+AGG | - | chr1.3:76551641-76551660 | MS.gene056298:intron | 40.0% | |
| GTTGTTCCTTGTCATGAGAA+AGG | - | chr1.3:76552106-76552125 | MS.gene056298:CDS | 40.0% | |
| GTTGTTGCTATAGAGGAATC+TGG | - | chr1.3:76551727-76551746 | MS.gene056298:intron | 40.0% | |
| TGGAACAACCATCAAAACCA+AGG | - | chr1.3:76551777-76551796 | MS.gene056298:intron | 40.0% | |
| TGTTGCAGATAAGGAGCTAA+TGG | - | chr1.3:76552696-76552715 | MS.gene056298:CDS | 40.0% | |
| ! | AGCCTTGTCCAAAAAACCAA+AGG | - | chr1.3:76552987-76553006 | MS.gene056298:CDS | 40.0% |
| ! | ATGTGATGGAATCAACTCTG+TGG | - | chr1.3:76551949-76551968 | MS.gene056298:intron | 40.0% |
| ! | TCAGCAGGCTGATTCAAAAT+TGG | - | chr1.3:76553125-76553144 | MS.gene056298:intron | 40.0% |
| !! | ATGTACCTAATGGTGCCATT+CGG | + | chr1.3:76551700-76551719 | None:intergenic | 40.0% |
| !! | CTTGACTTGTGTTGCAGATA+AGG | - | chr1.3:76552687-76552706 | MS.gene056298:CDS | 40.0% |
| !! | GTCATGAGAAAGGTGTTTAC+TGG | - | chr1.3:76552116-76552135 | MS.gene056298:CDS | 40.0% |
| !! | TATTGCAGGTGTTATTCAGC+AGG | - | chr1.3:76553110-76553129 | MS.gene056298:intron | 40.0% |
| !!! | ATTTTGGCTCCATTACTAGC+TGG | - | chr1.3:76553168-76553187 | MS.gene056298:CDS | 40.0% |
| !!! | TATGGCAAAGGTTTTAGAGC+TGG | - | chr1.3:76552082-76552101 | MS.gene056298:CDS | 40.0% |
| AAAAGGGAATTGACCTTGGG+TGG | + | chr1.3:76552161-76552180 | None:intergenic | 45.0% | |
| AAAGTGGTTAGGCTTCAAGG+AGG | - | chr1.3:76551976-76551995 | MS.gene056298:intron | 45.0% | |
| AACTTCCGAATGGCACCATT+AGG | - | chr1.3:76551692-76551711 | MS.gene056298:intron | 45.0% | |
| AATGTTCAGTCCTAAGGAGG+TGG | - | chr1.3:76552451-76552470 | MS.gene056298:CDS | 45.0% | |
| ACATCCTTGGGAGCTCATAA+TGG | - | chr1.3:76552840-76552859 | MS.gene056298:intron | 45.0% | |
| ACATGTGCTTCAACGGATCT+TGG | + | chr1.3:76552404-76552423 | None:intergenic | 45.0% | |
| ACCAAAGGAAGAAGAAGAGG+AGG | - | chr1.3:76553002-76553021 | MS.gene056298:CDS | 45.0% | |
| ATGACACCTGATCTTGGTCA+AGG | - | chr1.3:76552913-76552932 | MS.gene056298:CDS | 45.0% | |
| CATCCTTGGGAGCTCATAAT+GGG | - | chr1.3:76552841-76552860 | MS.gene056298:intron | 45.0% | |
| CATTCGGAAGTTCATTGGCA+AGG | + | chr1.3:76551684-76551703 | None:intergenic | 45.0% | |
| CTTGCCAATGAACTTCCGAA+TGG | - | chr1.3:76551682-76551701 | MS.gene056298:intron | 45.0% | |
| GAAGTCCTAAGGCAGTAGTA+AGG | + | chr1.3:76551005-76551024 | None:intergenic | 45.0% | |
| GATGTATATGTTTGTGGCGG+AGG | + | chr1.3:76551277-76551296 | None:intergenic | 45.0% | |
| GGAAAATGCTTGGAAAGCCT+TGG | - | chr1.3:76551229-76551248 | MS.gene056298:CDS | 45.0% | |
| TCAACTCTGTGGTTGCAAAG+TGG | - | chr1.3:76551960-76551979 | MS.gene056298:intron | 45.0% | |
| TCAGACGCATTGAGAGTAAC+TGG | - | chr1.3:76551188-76551207 | MS.gene056298:CDS | 45.0% | |
| TCCTCCTCTTCTTCTTCCTT+TGG | + | chr1.3:76553006-76553025 | None:intergenic | 45.0% | |
| TCTGTGGTTGCAAAGTGGTT+AGG | - | chr1.3:76551965-76551984 | MS.gene056298:intron | 45.0% | |
| TGACACCTGATCTTGGTCAA+GGG | - | chr1.3:76552914-76552933 | MS.gene056298:CDS | 45.0% | |
| TGCAAAGTGGTTAGGCTTCA+AGG | - | chr1.3:76551973-76551992 | MS.gene056298:intron | 45.0% | |
| TTCAAGGAGGCCACTTATAC+AGG | - | chr1.3:76551989-76552008 | MS.gene056298:intron | 45.0% | |
| TTGACCAAGATCAGGTGTCA+TGG | + | chr1.3:76552914-76552933 | None:intergenic | 45.0% | |
| TTTCCCATTATGAGCTCCCA+AGG | + | chr1.3:76552847-76552866 | None:intergenic | 45.0% | |
| ! | AAAGTACTTGAATCGGGTGC+AGG | - | chr1.3:76551424-76551443 | MS.gene056298:CDS | 45.0% |
| ! | AATCAGGGGTTTTGCAGAGT+TGG | - | chr1.3:76552021-76552040 | MS.gene056298:CDS | 45.0% |
| ! | TGACCAAGATCAGGTGTCAT+GGG | + | chr1.3:76552913-76552932 | None:intergenic | 45.0% |
| !! | GGTGTTGTGCTTTAGAGGAT+GGG | - | chr1.3:76552938-76552957 | MS.gene056298:CDS | 45.0% |
| !! | GTGTTGTGCTTTAGAGGATG+GGG | - | chr1.3:76552939-76552958 | MS.gene056298:CDS | 45.0% |
| ACACCTGATCTTGGTCAAGG+GGG | - | chr1.3:76552916-76552935 | MS.gene056298:CDS | 50.0% | |
| ATTGTGGGAGCTGGAATTGC+TGG | - | chr1.3:76550979-76550998 | MS.gene056298:CDS | 50.0% | |
| CTACTGCCTTAGGACTTCAC+AGG | - | chr1.3:76551007-76551026 | MS.gene056298:CDS | 50.0% | |
| GACACCTGATCTTGGTCAAG+GGG | - | chr1.3:76552915-76552934 | MS.gene056298:CDS | 50.0% | |
| GATGTTGTGATTGTGGGAGC+TGG | - | chr1.3:76550970-76550989 | MS.gene056298:CDS | 50.0% | |
| GTGGTACCTGTGAAGTCCTA+AGG | + | chr1.3:76551016-76551035 | None:intergenic | 50.0% | |
| TCCAACACCAACAGCATCCA+AGG | + | chr1.3:76551249-76551268 | None:intergenic | 50.0% | |
| TCTTAGCACACCACCTCCTT+AGG | + | chr1.3:76552464-76552483 | None:intergenic | 50.0% | |
| TGGAAAGCCTTGGATGCTGT+TGG | - | chr1.3:76551239-76551258 | MS.gene056298:CDS | 50.0% | |
| ! | GACCAAGATCAGGTGTCATG+GGG | + | chr1.3:76552912-76552931 | None:intergenic | 50.0% |
| !! | GGGTGTTGTGCTTTAGAGGA+TGG | - | chr1.3:76552937-76552956 | MS.gene056298:CDS | 50.0% |
| !! | GGTGCCATTCGGAAGTTCAT+TGG | + | chr1.3:76551689-76551708 | None:intergenic | 50.0% |
| !! | TTGTGCTTTAGAGGATGGGG+TGG | - | chr1.3:76552942-76552961 | MS.gene056298:CDS | 50.0% |
| !!! | AGGATGGGGTGGTTTTAGCA+AGG | - | chr1.3:76552953-76552972 | MS.gene056298:CDS | 50.0% |
| ACTTGGACTCCTACCACCCA+AGG | - | chr1.3:76552145-76552164 | MS.gene056298:CDS | 55.0% | |
| CACCCCATGACACCTGATCT+TGG | - | chr1.3:76552907-76552926 | MS.gene056298:CDS | 55.0% | |
| CACCTGATCTTGGTCAAGGG+GGG | - | chr1.3:76552917-76552936 | MS.gene056298:CDS | 55.0% | |
| GCCTTGGATGCTGTTGGTGT+TGG | - | chr1.3:76551245-76551264 | MS.gene056298:CDS | 55.0% | |
| GGGAATTGACCTTGGGTGGT+AGG | + | chr1.3:76552157-76552176 | None:intergenic | 55.0% | |
| !! | AGGGGGGTGTTGTGCTTTAG+AGG | - | chr1.3:76552933-76552952 | MS.gene056298:CDS | 55.0% |
| !! | GCTGGCCTTACTACTGCCTT+AGG | - | chr1.3:76550997-76551016 | MS.gene056298:CDS | 55.0% |
| CACCCCCCTTGACCAAGATC+AGG | + | chr1.3:76552922-76552941 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76550943 | 76553236 | 76550943 | ID=MS.gene056298 |
| chr1.3 | mRNA | 76550943 | 76553236 | 76550943 | ID=MS.gene056298.t1;Parent=MS.gene056298 |
| chr1.3 | exon | 76553151 | 76553236 | 76553151 | ID=MS.gene056298.t1.exon1;Parent=MS.gene056298.t1 |
| chr1.3 | CDS | 76553151 | 76553236 | 76553151 | ID=cds.MS.gene056298.t1;Parent=MS.gene056298.t1 |
| chr1.3 | exon | 76552876 | 76553022 | 76552876 | ID=MS.gene056298.t1.exon2;Parent=MS.gene056298.t1 |
| chr1.3 | CDS | 76552876 | 76553022 | 76552876 | ID=cds.MS.gene056298.t1;Parent=MS.gene056298.t1 |
| chr1.3 | exon | 76552665 | 76552733 | 76552665 | ID=MS.gene056298.t1.exon3;Parent=MS.gene056298.t1 |
| chr1.3 | CDS | 76552665 | 76552733 | 76552665 | ID=cds.MS.gene056298.t1;Parent=MS.gene056298.t1 |
| chr1.3 | exon | 76552381 | 76552537 | 76552381 | ID=MS.gene056298.t1.exon4;Parent=MS.gene056298.t1 |
| chr1.3 | CDS | 76552381 | 76552537 | 76552381 | ID=cds.MS.gene056298.t1;Parent=MS.gene056298.t1 |
| chr1.3 | exon | 76552013 | 76552241 | 76552013 | ID=MS.gene056298.t1.exon5;Parent=MS.gene056298.t1 |
| chr1.3 | CDS | 76552013 | 76552241 | 76552013 | ID=cds.MS.gene056298.t1;Parent=MS.gene056298.t1 |
| chr1.3 | exon | 76550943 | 76551475 | 76550943 | ID=MS.gene056298.t1.exon6;Parent=MS.gene056298.t1 |
| chr1.3 | CDS | 76550943 | 76551475 | 76550943 | ID=cds.MS.gene056298.t1;Parent=MS.gene056298.t1 |
| Gene Sequence |
| Protein sequence |
