AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26607

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26607.t1 MTR_4g087965 98.107 317 6 0 1 317 30 346 0.0 654
MS.gene26607.t1 MTR_7g029030 49.175 303 145 4 12 314 24 317 1.03e-94 283
MS.gene26607.t1 MTR_1g090760 43.709 302 168 2 12 313 27 326 5.06e-90 272
MS.gene26607.t1 MTR_8g062780 44.040 302 166 2 12 313 22 320 1.46e-86 263
MS.gene26607.t1 MTR_1g009750 43.791 306 165 4 12 315 26 326 4.50e-85 259
MS.gene26607.t1 MTR_4g127670 45.246 305 158 4 12 314 23 320 1.03e-84 258
MS.gene26607.t1 MTR_5g016010 42.320 319 172 6 1 315 17 327 5.38e-83 254
MS.gene26607.t1 MTR_4g095450 43.831 308 158 6 12 315 26 322 8.35e-82 251
MS.gene26607.t1 MTR_0286s0010 42.295 305 166 7 12 313 33 330 1.54e-81 250
MS.gene26607.t1 MTR_6g008075 42.295 305 166 7 12 313 33 330 1.54e-81 250
MS.gene26607.t1 MTR_2g029815 43.137 306 167 5 12 315 28 328 1.87e-78 243
MS.gene26607.t1 MTR_2g029820 43.137 306 167 5 12 315 28 328 9.39e-78 241
MS.gene26607.t1 MTR_2g088770 41.830 306 169 6 12 315 25 323 1.77e-77 239
MS.gene26607.t1 MTR_6g027440 44.371 302 157 6 12 313 20 310 7.23e-76 235
MS.gene26607.t1 MTR_4g046713 41.639 305 171 5 12 315 26 324 7.93e-76 235
MS.gene26607.t1 MTR_2g437770 42.071 309 166 5 7 315 44 339 1.52e-75 235
MS.gene26607.t1 MTR_2g029830 42.345 307 168 6 12 315 27 327 1.89e-75 235
MS.gene26607.t1 MTR_7g107520 41.254 303 169 6 13 315 25 318 9.71e-74 230
MS.gene26607.t1 MTR_7g086870 42.193 301 159 6 13 313 22 307 1.66e-73 229
MS.gene26607.t1 MTR_1g025980 40.317 315 178 6 1 315 12 316 1.93e-73 229
MS.gene26607.t1 MTR_1g101830 39.735 302 173 5 12 313 26 318 2.42e-73 229
MS.gene26607.t1 MTR_2g029800 42.157 306 170 5 12 315 28 328 2.46e-73 230
MS.gene26607.t1 MTR_7g086820 42.193 301 162 6 13 313 20 308 2.63e-73 229
MS.gene26607.t1 MTR_8g075100 41.196 301 166 6 13 313 26 315 4.24e-73 228
MS.gene26607.t1 MTR_2g029750 42.810 306 168 5 12 315 28 328 5.06e-73 229
MS.gene26607.t1 MTR_6g043240 40.000 305 168 5 11 315 40 329 6.81e-73 229
MS.gene26607.t1 MTR_1g009750 40.461 304 161 5 12 315 26 309 1.06e-72 227
MS.gene26607.t1 MTR_7g093370 40.984 305 172 6 12 313 68 367 1.12e-72 229
MS.gene26607.t1 MTR_3g092990 41.060 302 174 3 12 313 25 322 3.34e-72 226
MS.gene26607.t1 MTR_2g008710 42.434 304 161 6 15 314 29 322 6.30e-72 225
MS.gene26607.t1 MTR_2g029730 40.717 307 173 6 12 315 24 324 1.25e-71 225
MS.gene26607.t1 MTR_5g022870 41.311 305 164 7 11 313 21 312 1.35e-71 224
MS.gene26607.t1 MTR_1g038680 42.053 302 170 5 15 314 31 329 2.23e-71 224
MS.gene26607.t1 MTR_5g021060 40.260 308 178 5 7 313 24 326 6.96e-71 223
MS.gene26607.t1 MTR_3g094650 41.254 303 166 5 12 313 27 318 8.40e-71 223
MS.gene26607.t1 MTR_2g029850 40.196 306 176 5 12 315 28 328 2.19e-70 222
MS.gene26607.t1 MTR_4g133800 41.196 301 165 6 14 314 42 330 2.25e-70 222
MS.gene26607.t1 MTR_5g074970 44.590 305 155 6 12 313 29 322 3.17e-70 221
MS.gene26607.t1 MTR_1g054205 40.132 304 176 5 12 313 23 322 4.45e-70 221
MS.gene26607.t1 MTR_2g029740 41.503 306 172 5 12 315 28 328 6.03e-70 221
MS.gene26607.t1 MTR_6g043280 39.935 308 172 5 8 315 36 330 6.94e-70 221
MS.gene26607.t1 MTR_5g017850 38.636 308 184 4 6 313 20 322 7.68e-70 220
MS.gene26607.t1 MTR_1g077000 41.860 301 159 8 13 313 39 323 6.49e-69 218
MS.gene26607.t1 MTR_4g132490 39.604 303 177 3 12 314 28 324 7.31e-69 218
MS.gene26607.t1 MTR_5g017860 38.636 308 184 4 6 313 20 322 1.01e-68 217
MS.gene26607.t1 MTR_4g030890 40.656 305 157 8 17 313 104 392 1.14e-68 220
MS.gene26607.t1 MTR_2g028980 41.042 307 172 6 12 315 28 328 1.48e-68 218
MS.gene26607.t1 MTR_2g029560 38.562 306 181 5 12 315 23 323 2.18e-68 217
MS.gene26607.t1 MTR_4g031140 40.656 305 157 8 17 313 32 320 2.24e-68 217
MS.gene26607.t1 MTR_4g029170 41.587 315 170 7 1 313 15 317 5.86e-68 215
MS.gene26607.t1 MTR_6g043460 40.264 303 169 5 11 313 34 324 8.26e-68 216
MS.gene26607.t1 MTR_4g114210 41.720 314 168 7 6 314 14 317 1.50e-67 214
MS.gene26607.t1 MTR_2g029860 39.016 305 179 5 12 314 28 327 1.76e-67 215
MS.gene26607.t1 MTR_2g029910 39.216 306 180 4 12 315 29 330 8.46e-67 213
MS.gene26607.t1 MTR_2g084080 40.132 304 170 6 12 315 24 315 1.20e-66 212
MS.gene26607.t1 MTR_2g084110 40.132 304 170 6 12 315 24 315 2.70e-66 211
MS.gene26607.t1 MTR_4g029180 42.667 300 158 7 16 313 30 317 2.82e-66 211
MS.gene26607.t1 MTR_7g072510 38.689 305 175 5 9 313 16 308 3.64e-66 210
MS.gene26607.t1 MTR_2g084020 39.672 305 171 7 12 315 24 316 3.85e-66 210
MS.gene26607.t1 MTR_3g466200 42.623 305 160 7 12 313 24 316 3.99e-66 210
MS.gene26607.t1 MTR_2g040000 40.584 308 169 6 12 313 28 327 4.12e-66 211
MS.gene26607.t1 MTR_8g076820 40.604 298 171 6 17 313 34 326 4.74e-66 211
MS.gene26607.t1 MTR_1g022970 39.934 303 175 5 13 313 46 343 5.08e-66 211
MS.gene26607.t1 MTR_7g072480 39.672 305 172 5 9 313 20 312 5.53e-66 210
MS.gene26607.t1 MTR_4g125940 40.323 310 172 7 9 313 24 325 6.32e-66 210
MS.gene26607.t1 MTR_5g083860 39.604 303 171 5 12 313 30 321 1.44e-65 209
MS.gene26607.t1 MTR_3g072190 40.594 303 168 5 11 313 24 314 2.71e-65 208
MS.gene26607.t1 MTR_2g084000 39.610 308 173 7 9 315 22 317 2.98e-65 208
MS.gene26607.t1 MTR_1g066710 36.842 304 180 5 12 313 26 319 7.12e-65 207
MS.gene26607.t1 MTR_0155s0040 39.867 301 165 8 13 313 27 311 7.30e-65 207
MS.gene26607.t1 MTR_5g049280 37.582 306 183 5 12 313 32 333 7.37e-65 207
MS.gene26607.t1 MTR_4g122640 40.264 303 171 7 13 313 38 332 8.36e-65 207
MS.gene26607.t1 MTR_1g086490 38.700 323 182 7 4 315 21 338 3.37e-64 206
MS.gene26607.t1 MTR_2g084010 39.672 305 171 7 12 315 24 316 1.16e-63 204
MS.gene26607.t1 MTR_2g084090 38.816 304 175 5 12 315 24 316 1.16e-63 204
MS.gene26607.t1 MTR_5g014100 39.748 317 180 6 3 313 16 327 4.86e-63 203
MS.gene26607.t1 MTR_4g083710 40.850 306 168 6 12 314 26 321 6.24e-63 202
MS.gene26607.t1 MTR_3g105790 37.742 310 182 4 7 314 19 319 9.19e-63 202
MS.gene26607.t1 MTR_5g074710 41.042 307 163 9 12 313 24 317 1.18e-62 201
MS.gene26607.t1 MTR_1g086320 38.710 310 177 8 12 315 29 331 1.60e-62 201
MS.gene26607.t1 MTR_2g029830 42.529 261 141 6 58 315 5 259 3.61e-62 199
MS.gene26607.t1 MTR_5g074760 40.717 307 164 9 12 313 24 317 4.30e-62 200
MS.gene26607.t1 MTR_3g092990 39.073 302 169 4 12 313 25 311 5.42e-62 199
MS.gene26607.t1 MTR_5g074740 40.391 307 165 9 12 313 24 317 2.70e-61 198
MS.gene26607.t1 MTR_1g066380 36.184 304 182 5 12 313 26 319 5.00e-61 197
MS.gene26607.t1 MTR_4g029190 40.000 300 166 6 17 314 50 337 8.94e-61 197
MS.gene26607.t1 MTR_3g094670 39.604 303 171 5 12 313 27 318 9.06e-61 197
MS.gene26607.t1 MTR_3g094630 40.594 303 168 5 12 313 27 318 9.98e-61 196
MS.gene26607.t1 MTR_4g125940 42.545 275 145 7 44 313 4 270 1.12e-60 195
MS.gene26607.t1 MTR_1g066640 36.184 304 182 5 12 313 26 319 2.07e-60 196
MS.gene26607.t1 MTR_2g067440 35.000 340 186 6 4 314 51 384 3.38e-60 197
MS.gene26607.t1 MTR_3g467600 37.700 313 178 8 6 313 20 320 3.96e-60 195
MS.gene26607.t1 MTR_4g029200 38.944 303 173 5 12 314 45 335 6.68e-60 195
MS.gene26607.t1 MTR_2g078610 35.843 332 179 6 13 314 76 403 2.25e-59 196
MS.gene26607.t1 MTR_4g132110 35.410 305 185 5 13 315 32 326 2.80e-59 193
MS.gene26607.t1 MTR_2g077990 36.145 332 178 6 13 314 76 403 4.40e-59 195
MS.gene26607.t1 MTR_2g099175 37.582 306 178 6 12 313 35 331 8.32e-59 192
MS.gene26607.t1 MTR_2g078280 35.737 319 172 5 13 301 76 391 1.38e-57 191
MS.gene26607.t1 MTR_4g132110 35.484 310 183 7 13 315 32 331 2.05e-57 189
MS.gene26607.t1 MTR_2g008160 38.961 308 173 6 12 314 23 320 3.79e-57 187
MS.gene26607.t1 MTR_5g074860 37.188 320 181 10 1 313 15 321 6.35e-57 187
MS.gene26607.t1 MTR_5g033470 36.190 315 193 7 3 313 63 373 8.73e-57 188
MS.gene26607.t1 MTR_1g066680 35.526 304 183 6 12 313 26 318 5.10e-56 184
MS.gene26607.t1 MTR_1g115900 37.049 305 176 8 12 313 26 317 1.71e-55 183
MS.gene26607.t1 MTR_4g074995 39.542 306 159 7 12 314 23 305 4.10e-55 182
MS.gene26607.t1 MTR_2g008730 37.829 304 151 6 15 314 29 298 6.95e-55 181
MS.gene26607.t1 MTR_7g026990 37.417 302 166 7 17 313 35 318 9.06e-55 181
MS.gene26607.t1 MTR_3g466180 37.417 302 177 5 12 313 30 319 9.11e-53 176
MS.gene26607.t1 MTR_3g072190 41.085 258 140 5 56 313 2 247 1.91e-52 173
MS.gene26607.t1 MTR_4g074990 37.377 305 164 6 12 314 23 302 2.44e-52 174
MS.gene26607.t1 MTR_2g067450 34.853 307 185 6 13 314 11 307 9.61e-51 171
MS.gene26607.t1 MTR_0147s0010 33.231 325 172 6 13 314 77 379 3.02e-47 163
MS.gene26607.t1 MTR_3g105790 41.048 229 131 3 88 314 17 243 6.48e-47 159
MS.gene26607.t1 MTR_4g074980 39.749 239 133 4 12 248 24 253 1.46e-46 158
MS.gene26607.t1 MTR_1g066380 35.521 259 155 5 57 313 3 251 8.20e-46 156
MS.gene26607.t1 MTR_2g008160 34.416 308 152 6 12 314 23 285 2.78e-43 150
MS.gene26607.t1 MTR_4g074980 44.681 188 101 2 12 199 24 208 3.76e-43 150
MS.gene26607.t1 MTR_2g008160 42.640 197 96 3 12 208 23 202 4.01e-43 147
MS.gene26607.t1 MTR_5g074700 38.158 228 116 8 89 313 5 210 2.71e-36 130
MS.gene26607.t1 MTR_5g074860 30.938 320 162 10 1 313 15 282 7.39e-34 125
MS.gene26607.t1 MTR_2g029880 36.979 192 107 5 126 315 7 186 1.60e-30 115
MS.gene26607.t1 MTR_3g072210 37.566 189 107 5 127 313 55 234 2.88e-30 115
MS.gene26607.t1 MTR_7g086790 38.095 189 91 6 60 248 17 179 5.59e-26 102
MS.gene26607.t1 MTR_7g072490 32.489 237 95 6 59 295 2 173 6.18e-25 100
MS.gene26607.t1 MTR_2g078560 30.000 220 123 4 125 314 99 317 1.65e-23 99.0
MS.gene26607.t1 MTR_3g072260 45.133 113 59 2 11 123 24 133 1.82e-23 94.4
MS.gene26607.t1 MTR_2g077980 29.412 289 158 10 64 314 1 281 2.60e-23 97.4
MS.gene26607.t1 MTR_5g058120 35.583 163 92 3 151 313 6 155 5.56e-21 90.5
MS.gene26607.t1 MTR_6g048160 58.108 74 24 3 52 125 22 88 4.91e-17 75.5
MS.gene26607.t1 MTR_3g462850 31.884 138 89 3 180 313 9 145 6.91e-17 76.6
MS.gene26607.t1 MTR_4g114220 48.315 89 33 3 37 125 27 102 2.53e-16 75.1
MS.gene26607.t1 MTR_5g022510 29.457 258 129 8 44 296 31 240 6.60e-16 77.0
MS.gene26607.t1 MTR_1g089005 41.739 115 57 3 13 121 15 125 3.76e-15 72.0
MS.gene26607.t1 MTR_7g086810 33.058 121 52 1 13 133 6 97 1.90e-13 69.3
MS.gene26607.t1 MTR_4g031040 31.200 125 68 3 126 250 25 131 3.11e-13 66.2
MS.gene26607.t1 MTR_4g012865 50.000 54 27 0 13 66 77 130 3.98e-13 66.2
MS.gene26607.t1 MTR_7g086785 40.698 86 47 1 59 144 4 85 4.22e-13 65.9
MS.gene26607.t1 MTR_1g098320 43.590 78 43 1 239 316 47 123 1.28e-12 64.7
MS.gene26607.t1 MTR_3g088160 28.571 196 113 5 107 296 178 352 5.04e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26607.t1 AT2G34060 65.472 307 106 0 11 317 40 346 6.61e-156 440
MS.gene26607.t1 AT5G14130 48.408 314 156 3 1 314 20 327 3.26e-96 288
MS.gene26607.t1 AT5G14130 48.408 314 156 3 1 314 61 368 1.53e-95 287
MS.gene26607.t1 AT2G18980 48.197 305 148 4 12 314 24 320 1.76e-91 275
MS.gene26607.t1 AT1G24110 45.741 317 166 5 1 316 10 321 1.09e-90 273
MS.gene26607.t1 AT5G67400 46.382 304 157 4 12 313 26 325 4.57e-88 267
MS.gene26607.t1 AT4G17690 43.750 304 163 3 10 313 23 318 1.22e-87 266
MS.gene26607.t1 AT4G30170 45.455 308 158 4 9 314 23 322 2.85e-87 265
MS.gene26607.t1 AT4G37520 45.752 306 156 5 12 313 26 325 3.96e-86 262
MS.gene26607.t1 AT5G47000 45.183 301 158 3 13 313 33 326 4.43e-85 259
MS.gene26607.t1 AT4G37530 46.078 306 155 5 12 313 26 325 6.96e-85 259
MS.gene26607.t1 AT4G37520 45.098 306 155 6 12 313 26 322 9.32e-83 253
MS.gene26607.t1 AT3G49960 43.464 306 163 5 12 313 26 325 9.92e-81 248
MS.gene26607.t1 AT3G28200 41.060 302 169 3 12 313 20 312 6.21e-80 246
MS.gene26607.t1 AT5G40150 40.397 302 172 3 12 313 31 324 9.57e-80 246
MS.gene26607.t1 AT3G03670 41.311 305 167 5 12 313 22 317 2.79e-76 236
MS.gene26607.t1 AT4G33420 45.545 303 149 8 11 313 35 321 1.00e-75 235
MS.gene26607.t1 AT4G37530 46.947 262 130 4 12 269 26 282 1.31e-75 233
MS.gene26607.t1 AT4G33420 45.545 303 149 8 11 313 82 368 3.78e-75 235
MS.gene26607.t1 AT1G05260 41.748 309 171 6 9 315 22 323 5.52e-75 233
MS.gene26607.t1 AT4G36430 40.268 298 172 5 17 313 34 326 2.95e-73 229
MS.gene26607.t1 AT5G51890 43.007 286 152 6 13 295 26 303 4.27e-73 228
MS.gene26607.t1 AT5G17820 39.735 302 167 5 12 313 23 309 4.51e-73 228
MS.gene26607.t1 AT5G17820 39.735 302 167 5 12 313 76 362 9.94e-72 226
MS.gene26607.t1 AT5G06720 40.132 304 175 6 12 313 31 329 1.77e-71 224
MS.gene26607.t1 AT5G66390 39.933 298 173 5 17 313 37 329 1.80e-71 224
MS.gene26607.t1 AT4G08770 41.830 306 169 6 12 313 23 323 4.13e-71 224
MS.gene26607.t1 AT1G71695 41.456 316 166 7 4 314 35 336 8.31e-71 224
MS.gene26607.t1 AT2G18150 38.926 298 176 6 17 313 40 332 8.65e-71 223
MS.gene26607.t1 AT1G49570 39.414 307 180 4 9 313 44 346 1.12e-70 223
MS.gene26607.t1 AT4G31760 41.176 306 167 5 12 314 28 323 1.40e-70 222
MS.gene26607.t1 AT5G06730 39.145 304 178 5 12 313 32 330 1.69e-70 223
MS.gene26607.t1 AT4G08780 41.503 306 170 6 12 313 23 323 3.10e-70 222
MS.gene26607.t1 AT3G21770 39.869 306 175 6 12 315 28 326 3.22e-70 221
MS.gene26607.t1 AT2G18140 37.829 304 183 6 11 313 33 331 5.50e-70 221
MS.gene26607.t1 AT2G38390 39.672 305 176 6 12 313 30 329 5.80e-70 221
MS.gene26607.t1 AT5G05340 39.869 306 172 5 9 313 26 320 1.71e-69 219
MS.gene26607.t1 AT5G19880 40.000 305 177 5 12 313 24 325 2.06e-69 219
MS.gene26607.t1 AT4G11290 39.216 306 179 6 12 315 24 324 2.27e-69 219
MS.gene26607.t1 AT2G39040 39.103 312 182 6 8 315 41 348 2.27e-69 220
MS.gene26607.t1 AT1G44970 40.468 299 171 5 17 313 49 342 4.91e-69 219
MS.gene26607.t1 AT3G32980 39.542 306 176 6 12 313 30 330 6.92e-69 219
MS.gene26607.t1 AT1G05240 38.710 310 179 5 9 315 22 323 9.46e-69 217
MS.gene26607.t1 AT1G05250 38.710 310 179 5 9 315 22 323 9.46e-69 217
MS.gene26607.t1 AT5G22410 41.176 306 165 8 12 313 27 321 9.69e-69 218
MS.gene26607.t1 AT3G50990 39.744 312 178 8 5 313 33 337 1.02e-68 218
MS.gene26607.t1 AT5G64110 41.860 301 161 7 17 314 38 327 1.82e-68 217
MS.gene26607.t1 AT3G49120 39.869 306 175 6 12 313 31 331 2.71e-68 217
MS.gene26607.t1 AT3G49110 39.869 306 175 6 12 313 32 332 2.78e-68 217
MS.gene26607.t1 AT5G64120 39.333 300 171 5 15 314 37 325 3.28e-68 216
MS.gene26607.t1 AT2G24800 40.385 312 162 5 12 314 30 326 4.32e-68 216
MS.gene26607.t1 AT4G16270 40.984 305 170 7 13 315 50 346 5.45e-68 216
MS.gene26607.t1 AT5G19890 41.694 307 162 7 12 313 29 323 6.46e-68 215
MS.gene26607.t1 AT1G30870 42.105 304 162 6 13 314 51 342 9.52e-67 213
MS.gene26607.t1 AT2G41480 41.368 307 165 6 13 314 29 325 1.01e-66 212
MS.gene26607.t1 AT2G38380 39.016 305 178 6 12 313 30 329 2.00e-66 212
MS.gene26607.t1 AT5G42180 38.889 288 170 4 11 298 21 302 4.75e-66 210
MS.gene26607.t1 AT2G22420 39.333 300 168 8 17 313 27 315 7.17e-66 210
MS.gene26607.t1 AT4G26010 40.000 305 160 8 12 313 21 305 7.29e-65 207
MS.gene26607.t1 AT4G26010 40.000 305 160 8 12 313 49 333 8.06e-65 207
MS.gene26607.t1 AT3G17070 39.465 299 167 7 13 305 38 328 1.58e-64 207
MS.gene26607.t1 AT3G01190 38.944 303 172 8 13 313 26 317 3.39e-63 203
MS.gene26607.t1 AT1G68850 37.338 308 180 6 13 313 30 331 6.48e-63 202
MS.gene26607.t1 AT4G25980 38.312 308 176 6 12 314 25 323 1.10e-62 202
MS.gene26607.t1 AT5G64100 38.284 303 171 6 15 314 39 328 1.50e-62 201
MS.gene26607.t1 AT1G14540 38.158 304 176 6 12 314 20 312 1.50e-62 201
MS.gene26607.t1 AT5G24070 38.710 310 174 8 10 313 32 331 3.87e-62 201
MS.gene26607.t1 AT5G58400 41.118 304 166 7 12 313 29 321 5.97e-62 200
MS.gene26607.t1 AT1G14550 39.869 306 171 7 12 315 25 319 9.04e-62 199
MS.gene26607.t1 AT1G77100 38.961 308 169 9 12 314 23 316 2.32e-61 198
MS.gene26607.t1 AT5G15180 36.482 307 180 6 13 315 32 327 5.86e-61 197
MS.gene26607.t1 AT5G58390 40.461 304 168 6 12 313 20 312 5.87e-61 197
MS.gene26607.t1 AT5G39580 38.870 301 172 8 15 314 27 316 6.32e-61 197
MS.gene26607.t1 AT4G33870 33.631 336 184 4 13 314 68 398 2.72e-60 198
MS.gene26607.t1 AT4G21960 35.738 305 184 5 13 315 31 325 3.02e-60 196
MS.gene26607.t1 AT2G37130 34.098 305 188 5 12 313 29 323 4.32e-58 190
MS.gene26607.t1 AT2G37130 34.106 302 186 5 15 313 1 292 1.88e-57 187
MS.gene26607.t1 AT2G43480 36.893 309 179 8 11 313 33 331 1.92e-57 189
MS.gene26607.t1 AT1G34510 38.562 306 163 8 12 313 21 305 6.18e-56 184
MS.gene26607.t1 AT2G35380 37.299 311 168 9 17 313 34 331 6.00e-55 182
MS.gene26607.t1 AT3G17070 37.743 257 145 8 55 305 18 265 1.28e-47 161
MS.gene26607.t1 AT2G24800 42.941 170 90 1 12 181 30 192 3.05e-41 144
MS.gene26607.t1 AT2G35380 37.549 253 133 8 75 313 2 243 7.43e-41 143
MS.gene26607.t1 AT4G25980 35.945 217 127 4 12 223 70 279 5.50e-38 136
MS.gene26607.t1 AT5G39580 41.176 170 92 4 15 184 27 188 1.52e-35 129
MS.gene26607.t1 AT3G42570 35.000 120 74 3 66 183 32 149 8.46e-14 68.2

Find 82 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGACATGGTTGCTCTTTC+TGG 0.065768 4.1:-22392413 MS.gene26607:CDS
CCCTTCTTCACTTGGTAATA+GGG 0.193331 4.1:+22392548 None:intergenic
AGAATGTACTGCCCAAATTT+TGG 0.207449 4.1:-22392278 MS.gene26607:CDS
TCCGTGTTTCCACCAAAATT+TGG 0.213425 4.1:+22392266 None:intergenic
CTAAGAGCTTTCAATAGTTT+AGG 0.223221 4.1:+22392299 None:intergenic
TCTGCCAACTCCTTGCTTCC+TGG 0.229116 4.1:+22394132 None:intergenic
ATATTTGACCATGCGTATTA+TGG 0.247771 4.1:-22392209 MS.gene26607:CDS
TCCCTTCTTCACTTGGTAAT+AGG 0.256193 4.1:+22392547 None:intergenic
TAAGAGCTTTCAATAGTTTA+GGG 0.257185 4.1:+22392300 None:intergenic
CTTTCTGGTGCCCACACAAT+TGG 0.269689 4.1:-22392398 MS.gene26607:CDS
CCCATCTTCCCTTCTTCACT+TGG 0.323437 4.1:+22392540 None:intergenic
CCGTGTTTCCACCAAAATTT+GGG 0.343143 4.1:+22392267 None:intergenic
TTCTACCTGTGGACAAGATT+TGG 0.346708 4.1:+22394410 None:intergenic
ATCAAAATCTTCAATTCAAA+AGG 0.367858 4.1:-22392446 MS.gene26607:CDS
GCTAGCATCTGACCAAGCTT+TGG 0.370514 4.1:-22392162 MS.gene26607:CDS
AAAGGAGTAGTTGCATCAAA+TGG 0.398961 4.1:+22392233 None:intergenic
AGGCAAGGGGCAACCCGATC+CGG 0.406216 4.1:-22392330 MS.gene26607:CDS
TTCAAACAATCACCTGTCTC+TGG 0.450536 4.1:-22394357 MS.gene26607:CDS
AAGGAGTAGTTGCATCAAAT+GGG 0.454067 4.1:+22392234 None:intergenic
TTAGGGTTCATATCCGGATC+GGG 0.482340 4.1:+22392317 None:intergenic
AATAGTTTAGGGTTCATATC+CGG 0.483780 4.1:+22392311 None:intergenic
GATCGGGTTGCCCCTTGCCT+CGG 0.488382 4.1:+22392333 None:intergenic
AAGAGCAACCATGTCCTGTA+TGG 0.489344 4.1:+22392418 None:intergenic
TGAACCAGTGACTTGGTTCG+TGG 0.491604 4.1:+22392131 None:intergenic
ACCAAGTGAAGAAGGGAAGA+TGG 0.492354 4.1:-22392541 MS.gene26607:CDS
ACCCTATTACCAAGTGAAGA+AGG 0.494533 4.1:-22392549 MS.gene26607:CDS
CTCTACAATTACCGAGGCAA+GGG 0.496200 4.1:-22392344 MS.gene26607:CDS
CCACAGGTAGAACAGCTTGT+TGG 0.497989 4.1:-22394399 MS.gene26607:CDS
AGAGGATAATAAAGATTTGA+GGG 0.498161 4.1:-22394100 MS.gene26607:CDS
AATAAAGATTTGAGGGTGGA+AGG 0.500941 4.1:-22394093 MS.gene26607:CDS
GGTAACTTGCAGAACAAGAT+GGG 0.501421 4.1:-22392188 MS.gene26607:CDS
GAAAGATATCAATGGCATCA+AGG 0.505017 4.1:-22392514 MS.gene26607:CDS
CTACAAAGCAATCGTGGAAG+AGG 0.508447 4.1:+22394316 None:intergenic
TTCAAAAGGCTTAACCATAC+AGG 0.510894 4.1:-22392432 MS.gene26607:CDS
CGTAGTAATTAACGCTAAGC+TGG 0.515549 4.1:+22394433 None:intergenic
AGCATCAAAGCCAGGAAGCA+AGG 0.518216 4.1:-22394142 MS.gene26607:CDS
AAAATCTTGAACCAGTGACT+TGG 0.519174 4.1:+22392124 None:intergenic
CAGAGGATAATAAAGATTTG+AGG 0.521535 4.1:-22394101 MS.gene26607:CDS
TGGTAACTTGCAGAACAAGA+TGG 0.521675 4.1:-22392189 MS.gene26607:CDS
CCAAGTGAAGAAGGGAAGAT+GGG 0.523220 4.1:-22392540 MS.gene26607:CDS
CATCAACGGTTGAGTTTGCA+CGG 0.527620 4.1:+22392474 None:intergenic
ATGGTGGCAGGTCCAGAGAC+AGG 0.531082 4.1:+22394345 None:intergenic
TTTAGGGTTCATATCCGGAT+CGG 0.545516 4.1:+22392316 None:intergenic
ATCAACGGTTGAGTTTGCAC+GGG 0.545631 4.1:+22392475 None:intergenic
AAGAGGAGACGAATGGTGGC+AGG 0.552352 4.1:+22394333 None:intergenic
TATCAATGGCATCAAGGGTA+GGG 0.553936 4.1:-22392508 MS.gene26607:CDS
AAAGCCAGGAAGCAAGGAGT+TGG 0.555786 4.1:-22394136 MS.gene26607:CDS
ATATCAATGGCATCAAGGGT+AGG 0.557778 4.1:-22392509 MS.gene26607:CDS
CCCTATTACCAAGTGAAGAA+GGG 0.562996 4.1:-22392548 MS.gene26607:CDS
GTGAAGAAGGGAAGATGGGA+TGG 0.566639 4.1:-22392536 MS.gene26607:CDS
CCTCTACAATTACCGAGGCA+AGG 0.567609 4.1:-22392345 MS.gene26607:CDS
AAAGATATCAATGGCATCAA+GGG 0.572225 4.1:-22392513 MS.gene26607:CDS
TACGCATGGTCAAATATGAA+AGG 0.583526 4.1:+22392215 None:intergenic
GTTGGCAGAGAAAGATGCAG+AGG 0.587154 4.1:-22394118 MS.gene26607:CDS
AGATCCACGAACCAAGTCAC+TGG 0.587778 4.1:-22392135 MS.gene26607:CDS
ATGGGATGGAAAGATATCAA+TGG 0.591625 4.1:-22392522 MS.gene26607:CDS
CTACGCCAAATCTTGTCCAC+AGG 0.592646 4.1:-22394415 MS.gene26607:CDS
TCTGCACAGGACACCACACT+AGG 0.596049 4.1:+22394024 None:intergenic
GTGGATCTAAAGCCAAAGCT+TGG 0.600328 4.1:+22392150 None:intergenic
CCTTGCCTCGGTAATTGTAG+AGG 0.602314 4.1:+22392345 None:intergenic
TAATTAACGCTAAGCTGGCG+AGG 0.605457 4.1:+22394438 None:intergenic
GGATAATAAAGATTTGAGGG+TGG 0.613876 4.1:-22394097 MS.gene26607:CDS
AATTGCAAGAATATCTGCAC+AGG 0.614557 4.1:+22394011 None:intergenic
TATAAGGAAGGCCAAAGAAG+TGG 0.618453 4.1:-22394061 MS.gene26607:CDS
AGTTTAGTGAAAGTTGTGAG+AGG 0.619520 4.1:-22392047 MS.gene26607:CDS
AAGGAAGGCCAAAGAAGTGG+TGG 0.621870 4.1:-22394058 MS.gene26607:CDS
AGGCTTAACCATACAGGACA+TGG 0.630675 4.1:-22392426 MS.gene26607:CDS
GCAAGTTACCATAATACGCA+TGG 0.631688 4.1:+22392201 None:intergenic
AATGAGCAAATCCAATTGTG+TGG 0.649262 4.1:+22392387 None:intergenic
TTACTTCTACAAAGCAATCG+TGG 0.657207 4.1:+22394310 None:intergenic
TGATTGTTTGAATTGTTGAG+AGG 0.662875 4.1:+22394368 None:intergenic
TCAACGGTTGAGTTTGCACG+GGG 0.662885 4.1:+22392476 None:intergenic
AGGAGTAGTTGCATCAAATG+GGG 0.666012 4.1:+22392235 None:intergenic
TCTACAATTACCGAGGCAAG+GGG 0.667695 4.1:-22392343 MS.gene26607:CDS
CCAACAAGCTGTTCTACCTG+TGG 0.672022 4.1:+22394399 None:intergenic
ATGAGCAAATCCAATTGTGT+GGG 0.674056 4.1:+22392388 None:intergenic
GTGGAAGAGGAGACGAATGG+TGG 0.681628 4.1:+22394329 None:intergenic
GTAACTTGCAGAACAAGATG+GGG 0.694439 4.1:-22392187 MS.gene26607:CDS
ACTCGCCTCTACAATTACCG+AGG 0.697509 4.1:-22392350 MS.gene26607:CDS
TCATGTGTGACACAGGCAGG+GGG 0.702520 4.1:-22392572 MS.gene26607:intron
ATCGTGGAAGAGGAGACGAA+TGG 0.708190 4.1:+22394326 None:intergenic
CAACGGTTGAGTTTGCACGG+GGG 0.732395 4.1:+22392477 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATTAAATCAAATTAG+TGG + chr4.1:22392548-22392567 None:intergenic 10.0%
!!! TATAATATTAATTGTAGTTT+TGG - chr4.1:22393465-22393484 MS.gene26607:intron 10.0%
!!! TCATTTCTTTTTATTTAAAT+TGG + chr4.1:22393054-22393073 None:intergenic 10.0%
!!! TTTGTTTTAATGTTTTTATT+TGG + chr4.1:22393777-22393796 None:intergenic 10.0%
!! TACAATTAATATTATAGTGT+GGG + chr4.1:22393461-22393480 None:intergenic 15.0%
!! TGTTGGAAAAAAAAAATATT+TGG + chr4.1:22393218-22393237 None:intergenic 15.0%
!!! ATGTCATTACATAAAAATTT+TGG - chr4.1:22393152-22393171 MS.gene26607:intron 15.0%
!!! GATTTTTGTATTTTTAATGT+AGG + chr4.1:22393439-22393458 None:intergenic 15.0%
!! AAAAATTACGATTGGAATAA+AGG + chr4.1:22392582-22392601 None:intergenic 20.0%
!! AAGAAATGGTTAATTATACA+GGG - chr4.1:22393856-22393875 MS.gene26607:intron 20.0%
!! AGAACAATAATACTGAAAAT+TGG + chr4.1:22393673-22393692 None:intergenic 20.0%
!! ATCAAAATCTTCAATTCAAA+AGG - chr4.1:22394020-22394039 MS.gene26607:CDS 20.0%
!! CTACAATTAATATTATAGTG+TGG + chr4.1:22393462-22393481 None:intergenic 20.0%
!! TAAGAAATGGTTAATTATAC+AGG - chr4.1:22393855-22393874 MS.gene26607:intron 20.0%
!! TATTAACCAAAATCACATTA+AGG - chr4.1:22393357-22393376 MS.gene26607:intron 20.0%
!! TATTATGTTCTGTTAAGAAA+TGG - chr4.1:22393842-22393861 MS.gene26607:intron 20.0%
!!! ACACATATTTTATCTAGAAA+CGG + chr4.1:22392990-22393009 None:intergenic 20.0%
!!! ATTTTTGATGTAACCATATT+TGG - chr4.1:22392817-22392836 MS.gene26607:intron 20.0%
!!! TTTATTCCAATCGTAATTTT+TGG - chr4.1:22392581-22392600 MS.gene26607:intron 20.0%
! AGAAAATAACTTTCAAAACC+AGG + chr4.1:22392796-22392815 None:intergenic 25.0%
! AGAGGATAATAAAGATTTGA+GGG - chr4.1:22392366-22392385 MS.gene26607:CDS 25.0%
! ATAATACTGAAAATTGGACT+TGG + chr4.1:22393667-22393686 None:intergenic 25.0%
! CAACGTAAAGTACAAAAATT+CGG + chr4.1:22393594-22393613 None:intergenic 25.0%
! GAAAATAACTTTCAAAACCA+GGG + chr4.1:22392795-22392814 None:intergenic 25.0%
! TAAGAGCTTTCAATAGTTTA+GGG + chr4.1:22394169-22394188 None:intergenic 25.0%
! TAGCTAGACAAATTAACAAA+TGG + chr4.1:22393288-22393307 None:intergenic 25.0%
! TTTGGTATATGAATAGGAAA+AGG - chr4.1:22393100-22393119 MS.gene26607:intron 25.0%
!!! GTCCTAACATTCTAAAATAA+GGG - chr4.1:22392696-22392715 MS.gene26607:intron 25.0%
!!! TCTTAATATATTTTGAGTGC+AGG - chr4.1:22392898-22392917 MS.gene26607:intron 25.0%
!!! TGCTATTTTCTGTTAAGAAA+CGG - chr4.1:22393801-22393820 MS.gene26607:intron 25.0%
!!! TGTCCTAACATTCTAAAATA+AGG - chr4.1:22392695-22392714 MS.gene26607:intron 25.0%
AAAGATATCAATGGCATCAA+GGG - chr4.1:22393953-22393972 MS.gene26607:intron 30.0%
ATATTTGACCATGCGTATTA+TGG - chr4.1:22394257-22394276 MS.gene26607:intron 30.0%
ATGAAGCCAAAAATTACGAT+TGG + chr4.1:22392590-22392609 None:intergenic 30.0%
ATTCATATACCAAAAGACCA+AGG + chr4.1:22393094-22393113 None:intergenic 30.0%
CAGAGGATAATAAAGATTTG+AGG - chr4.1:22392365-22392384 MS.gene26607:CDS 30.0%
CTAAGAGCTTTCAATAGTTT+AGG + chr4.1:22394170-22394189 None:intergenic 30.0%
GAAATGACTCTCAAACATTT+AGG - chr4.1:22393067-22393086 MS.gene26607:intron 30.0%
TCAAAACTTAATGCACTACT+GGG + chr4.1:22392739-22392758 None:intergenic 30.0%
TCATGTTGTCATATACTGTT+TGG - chr4.1:22393548-22393567 MS.gene26607:intron 30.0%
TCTATCCATCTGATATGATA+TGG + chr4.1:22393704-22393723 None:intergenic 30.0%
TCTCTGTTATTCTGTAAAGT+TGG + chr4.1:22393016-22393035 None:intergenic 30.0%
TGATTGTTTGAATTGTTGAG+AGG + chr4.1:22392101-22392120 None:intergenic 30.0%
TTCATATACCAAAAGACCAA+GGG + chr4.1:22393093-22393112 None:intergenic 30.0%
TTGGACCTATAAAATTAAGC+AGG + chr4.1:22393648-22393667 None:intergenic 30.0%
! AATAGTTTAGGGTTCATATC+CGG + chr4.1:22394158-22394177 None:intergenic 30.0%
! AATTAAGCAGGTGTTGTAAT+TGG + chr4.1:22393636-22393655 None:intergenic 30.0%
! AATTAATTTCTGCCCTTTTC+TGG + chr4.1:22392859-22392878 None:intergenic 30.0%
! CAACACCTGCTTAATTTTAT+AGG - chr4.1:22393640-22393659 MS.gene26607:intron 30.0%
! TGGTCTTTTGGTATATGAAT+AGG - chr4.1:22393094-22393113 MS.gene26607:intron 30.0%
!! AATTGTTAGCTCTTTTGTCA+CGG + chr4.1:22393241-22393260 None:intergenic 30.0%
!! ATTCTAAAATAAGGGCAGTT+TGG - chr4.1:22392704-22392723 MS.gene26607:intron 30.0%
!! ATTTTAATAGCATCAAAGCC+AGG - chr4.1:22392316-22392335 MS.gene26607:CDS 30.0%
!!! AGGTTTTGAAACTATAAGGA+AGG - chr4.1:22392393-22392412 MS.gene26607:CDS 30.0%
!!! ATTTTAGAATGTTAGGACAC+AGG + chr4.1:22392694-22392713 None:intergenic 30.0%
!!! TGCCCTTATTTTAGAATGTT+AGG + chr4.1:22392701-22392720 None:intergenic 30.0%
!!! TGGAAGGTTTTGAAACTATA+AGG - chr4.1:22392389-22392408 MS.gene26607:CDS 30.0%
AAAATCTTGAACCAGTGACT+TGG + chr4.1:22394345-22394364 None:intergenic 35.0%
AAAGGAGTAGTTGCATCAAA+TGG + chr4.1:22394236-22394255 None:intergenic 35.0%
AAATCCTGAAAATGAGGTTG+AGG + chr4.1:22392258-22392277 None:intergenic 35.0%
AACCAGAAATCCTGAAAATG+AGG + chr4.1:22392264-22392283 None:intergenic 35.0%
AAGGAGTAGTTGCATCAAAT+GGG + chr4.1:22394235-22394254 None:intergenic 35.0%
AATAAAGATTTGAGGGTGGA+AGG - chr4.1:22392373-22392392 MS.gene26607:CDS 35.0%
AATACGCTAGACATTGTTAC+AGG - chr4.1:22393319-22393338 MS.gene26607:intron 35.0%
AATGAGCAAATCCAATTGTG+TGG + chr4.1:22394082-22394101 None:intergenic 35.0%
AATTGCAAGAATATCTGCAC+AGG + chr4.1:22392458-22392477 None:intergenic 35.0%
ACTTAAATGGACACCAGAAA+AGG - chr4.1:22392843-22392862 MS.gene26607:intron 35.0%
AGAGTGACTGTTTCATACAA+GGG - chr4.1:22393496-22393515 MS.gene26607:intron 35.0%
AGTTTAGTGAAAGTTGTGAG+AGG - chr4.1:22394419-22394438 MS.gene26607:CDS 35.0%
ATGAGCAAATCCAATTGTGT+GGG + chr4.1:22394081-22394100 None:intergenic 35.0%
ATGGGATGGAAAGATATCAA+TGG - chr4.1:22393944-22393963 MS.gene26607:intron 35.0%
CAAAACTTAATGCACTACTG+GGG + chr4.1:22392738-22392757 None:intergenic 35.0%
CCAGGGTTTAGTATTTGTTT+AGG - chr4.1:22392642-22392661 MS.gene26607:intron 35.0%
CCTAAACAAATACTAAACCC+TGG + chr4.1:22392645-22392664 None:intergenic 35.0%
CTATGCCATATCATATCAGA+TGG - chr4.1:22393696-22393715 MS.gene26607:intron 35.0%
CTCTTAACCAATACCAACAT+GGG + chr4.1:22393411-22393430 None:intergenic 35.0%
CTTAAATGGACACCAGAAAA+GGG - chr4.1:22392844-22392863 MS.gene26607:intron 35.0%
GAAAGATATCAATGGCATCA+AGG - chr4.1:22393952-22393971 MS.gene26607:intron 35.0%
GGATAATAAAGATTTGAGGG+TGG - chr4.1:22392369-22392388 MS.gene26607:CDS 35.0%
GGTTTAAATGAGTGAATGCA+GGG - chr4.1:22392280-22392299 MS.gene26607:CDS 35.0%
GTCAAAACTTAATGCACTAC+TGG + chr4.1:22392740-22392759 None:intergenic 35.0%
TACGCATGGTCAAATATGAA+AGG + chr4.1:22394254-22394273 None:intergenic 35.0%
TGGTTTAAATGAGTGAATGC+AGG - chr4.1:22392279-22392298 MS.gene26607:CDS 35.0%
TTACTTCTACAAAGCAATCG+TGG + chr4.1:22392159-22392178 None:intergenic 35.0%
TTCAAAAGGCTTAACCATAC+AGG - chr4.1:22394034-22394053 MS.gene26607:CDS 35.0%
! AGAATGTACTGCCCAAATTT+TGG - chr4.1:22394188-22394207 MS.gene26607:intron 35.0%
! ATACAAGTACAAAGTATCCC+TGG - chr4.1:22392775-22392794 MS.gene26607:intron 35.0%
! TTGTGAGAGGAAAAAAGCAT+GGG - chr4.1:22394432-22394451 MS.gene26607:CDS 35.0%
! TTTCTGGTGTCCATTTAAGT+GGG + chr4.1:22392843-22392862 None:intergenic 35.0%
! TTTTCCTCAACCTCATTTTC+AGG - chr4.1:22392251-22392270 MS.gene26607:CDS 35.0%
!! AACCTCATTTTCAGGATTTC+TGG - chr4.1:22392259-22392278 MS.gene26607:CDS 35.0%
!! GATTTTGATGAGCTCATCAA+CGG + chr4.1:22394009-22394028 None:intergenic 35.0%
!! TTTTCTGGTGTCCATTTAAG+TGG + chr4.1:22392844-22392863 None:intergenic 35.0%
ACCCTATTACCAAGTGAAGA+AGG - chr4.1:22393917-22393936 MS.gene26607:intron 40.0%
AGGAGTAGTTGCATCAAATG+GGG + chr4.1:22394234-22394253 None:intergenic 40.0%
ATATCAATGGCATCAAGGGT+AGG - chr4.1:22393957-22393976 MS.gene26607:intron 40.0%
CAGAGTGACTGTTTCATACA+AGG - chr4.1:22393495-22393514 MS.gene26607:intron 40.0%
CCATATTTGGCCCACTTAAA+TGG - chr4.1:22392830-22392849 MS.gene26607:intron 40.0%
CCATTTAAGTGGGCCAAATA+TGG + chr4.1:22392833-22392852 None:intergenic 40.0%
CCCTATTACCAAGTGAAGAA+GGG - chr4.1:22393918-22393937 MS.gene26607:intron 40.0%
CCGTGTTTCCACCAAAATTT+GGG + chr4.1:22394202-22394221 None:intergenic 40.0%
CCTCTTAACCAATACCAACA+TGG + chr4.1:22393412-22393431 None:intergenic 40.0%
CGTAGTAATTAACGCTAAGC+TGG + chr4.1:22392036-22392055 None:intergenic 40.0%
GACAAATCCCATGTTGGTAT+TGG - chr4.1:22393401-22393420 MS.gene26607:intron 40.0%
GAGTACAATATCGACAACCA+GGG - chr4.1:22392625-22392644 MS.gene26607:intron 40.0%
GCAAGTTACCATAATACGCA+TGG + chr4.1:22394268-22394287 None:intergenic 40.0%
GTTGTGAGAGGAAAAAAGCA+TGG - chr4.1:22394431-22394450 MS.gene26607:CDS 40.0%
TATAAGGAAGGCCAAAGAAG+TGG - chr4.1:22392405-22392424 MS.gene26607:CDS 40.0%
TATCAATGGCATCAAGGGTA+GGG - chr4.1:22393958-22393977 MS.gene26607:intron 40.0%
TCCGTGTTTCCACCAAAATT+TGG + chr4.1:22394203-22394222 None:intergenic 40.0%
TGAGTACAATATCGACAACC+AGG - chr4.1:22392624-22392643 MS.gene26607:intron 40.0%
TTAGAATGTTAGGACACAGG+AGG + chr4.1:22392691-22392710 None:intergenic 40.0%
TTCAAACAATCACCTGTCTC+TGG - chr4.1:22392109-22392128 MS.gene26607:CDS 40.0%
TTCTACCTGTGGACAAGATT+TGG + chr4.1:22392059-22392078 None:intergenic 40.0%
! AAGCAGGTGTTGTAATTGGT+GGG + chr4.1:22393632-22393651 None:intergenic 40.0%
! AGCAAGAGATTTTGTGCACT+TGG - chr4.1:22392480-22392499 MS.gene26607:CDS 40.0%
! ATGTACTGCCCAAATTTTGG+TGG - chr4.1:22394191-22394210 MS.gene26607:intron 40.0%
! CCCTTCTTCACTTGGTAATA+GGG + chr4.1:22393921-22393940 None:intergenic 40.0%
! CTTTTTCTCCACCACTTCTT+TGG + chr4.1:22392419-22392438 None:intergenic 40.0%
! GAGCGACCTTAATGTGATTT+TGG + chr4.1:22393366-22393385 None:intergenic 40.0%
! GGTAACTTGCAGAACAAGAT+GGG - chr4.1:22394278-22394297 MS.gene26607:intron 40.0%
! GTAACTTGCAGAACAAGATG+GGG - chr4.1:22394279-22394298 MS.gene26607:intron 40.0%
! TAAGCAGGTGTTGTAATTGG+TGG + chr4.1:22393633-22393652 None:intergenic 40.0%
! TCCCTTCTTCACTTGGTAAT+AGG + chr4.1:22393922-22393941 None:intergenic 40.0%
! TGGTAACTTGCAGAACAAGA+TGG - chr4.1:22394277-22394296 MS.gene26607:intron 40.0%
! TGTGAGAGGAAAAAAGCATG+GGG - chr4.1:22394433-22394452 MS.gene26607:CDS 40.0%
! TTTAGGGTTCATATCCGGAT+CGG + chr4.1:22394153-22394172 None:intergenic 40.0%
!! ACTGGTTCAAGATTTTGCGA+AGG - chr4.1:22394349-22394368 MS.gene26607:CDS 40.0%
!! CCATGTTGGTATTGGTTAAG+AGG - chr4.1:22393409-22393428 MS.gene26607:intron 40.0%
!! CCCAAATTTTGGTGGAAACA+CGG - chr4.1:22394199-22394218 MS.gene26607:intron 40.0%
!! GTCGCTCTAGAGATTAGAAA+CGG - chr4.1:22393379-22393398 MS.gene26607:intron 40.0%
!! TTAGCTTTGCATGCAACTGT+TGG - chr4.1:22392224-22392243 MS.gene26607:CDS 40.0%
AACTTAATGCACTACTGGGG+AGG + chr4.1:22392735-22392754 None:intergenic 45.0%
AAGAGCAACCATGTCCTGTA+TGG + chr4.1:22394051-22394070 None:intergenic 45.0%
ACCAAGTGAAGAAGGGAAGA+TGG - chr4.1:22393925-22393944 MS.gene26607:intron 45.0%
AGGAGGATGAGATCATTCTC+AGG + chr4.1:22392674-22392693 None:intergenic 45.0%
AGGCTTAACCATACAGGACA+TGG - chr4.1:22394040-22394059 MS.gene26607:CDS 45.0%
ATCAACGGTTGAGTTTGCAC+GGG + chr4.1:22393994-22394013 None:intergenic 45.0%
CAGTATGTCATGTGTGACAC+AGG - chr4.1:22393887-22393906 MS.gene26607:intron 45.0%
CATCAACGGTTGAGTTTGCA+CGG + chr4.1:22393995-22394014 None:intergenic 45.0%
CCAAGTGAAGAAGGGAAGAT+GGG - chr4.1:22393926-22393945 MS.gene26607:intron 45.0%
CTACAAAGCAATCGTGGAAG+AGG + chr4.1:22392153-22392172 None:intergenic 45.0%
CTCTACAATTACCGAGGCAA+GGG - chr4.1:22394122-22394141 MS.gene26607:CDS 45.0%
CTCTCAAACATTTAGGCCCT+TGG - chr4.1:22393074-22393093 MS.gene26607:intron 45.0%
GAAACGGACAAATCCCATGT+TGG - chr4.1:22393395-22393414 MS.gene26607:intron 45.0%
GGAGGATGAGATCATTCTCA+GGG + chr4.1:22392673-22392692 None:intergenic 45.0%
TAATTAACGCTAAGCTGGCG+AGG + chr4.1:22392031-22392050 None:intergenic 45.0%
TCTACAATTACCGAGGCAAG+GGG - chr4.1:22394123-22394142 MS.gene26607:CDS 45.0%
TGGCTTCATCCTTGTACTTG+CGG - chr4.1:22392601-22392620 MS.gene26607:intron 45.0%
TTAGGGTTCATATCCGGATC+GGG + chr4.1:22394152-22394171 None:intergenic 45.0%
TTGTACTCACCGCAAGTACA+AGG + chr4.1:22392613-22392632 None:intergenic 45.0%
! GAAAAAAGCATGGGGAGAGA+AGG - chr4.1:22394441-22394460 MS.gene26607:CDS 45.0%
! GTGGATCTAAAGCCAAAGCT+TGG + chr4.1:22394319-22394338 None:intergenic 45.0%
! TAGCTCTTTTGTCACGGTGT+TGG + chr4.1:22393235-22393254 None:intergenic 45.0%
!! CATTTAGGCCCTTGGTCTTT+TGG - chr4.1:22393082-22393101 MS.gene26607:intron 45.0%
!! GGAGAAAAAGTGTCCTAGTG+TGG - chr4.1:22392429-22392448 MS.gene26607:CDS 45.0%
AAAGCCAGGAAGCAAGGAGT+TGG - chr4.1:22392330-22392349 MS.gene26607:CDS 50.0%
AAGGAAGGCCAAAGAAGTGG+TGG - chr4.1:22392408-22392427 MS.gene26607:CDS 50.0%
ACTCGCCTCTACAATTACCG+AGG - chr4.1:22394116-22394135 MS.gene26607:CDS 50.0%
AGATCCACGAACCAAGTCAC+TGG - chr4.1:22394331-22394350 MS.gene26607:CDS 50.0%
AGCATCAAAGCCAGGAAGCA+AGG - chr4.1:22392324-22392343 MS.gene26607:CDS 50.0%
ATCGTGGAAGAGGAGACGAA+TGG + chr4.1:22392143-22392162 None:intergenic 50.0%
ATGTCATGTGTGACACAGGC+AGG - chr4.1:22393891-22393910 MS.gene26607:intron 50.0%
CAGGACATGGTTGCTCTTTC+TGG - chr4.1:22394053-22394072 MS.gene26607:CDS 50.0%
CCAACAAGCTGTTCTACCTG+TGG + chr4.1:22392070-22392089 None:intergenic 50.0%
CCACAGGTAGAACAGCTTGT+TGG - chr4.1:22392067-22392086 MS.gene26607:CDS 50.0%
CCCATCTTCCCTTCTTCACT+TGG + chr4.1:22393929-22393948 None:intergenic 50.0%
CCTCTACAATTACCGAGGCA+AGG - chr4.1:22394121-22394140 MS.gene26607:CDS 50.0%
CCTTGCCTCGGTAATTGTAG+AGG + chr4.1:22394124-22394143 None:intergenic 50.0%
CGCTAGACATTGTTACAGGC+TGG - chr4.1:22393323-22393342 MS.gene26607:intron 50.0%
CTACGCCAAATCTTGTCCAC+AGG - chr4.1:22392051-22392070 MS.gene26607:CDS 50.0%
GCTAGCATCTGACCAAGCTT+TGG - chr4.1:22394304-22394323 MS.gene26607:intron 50.0%
GTGAAGAAGGGAAGATGGGA+TGG - chr4.1:22393930-22393949 MS.gene26607:intron 50.0%
GTTGGCAGAGAAAGATGCAG+AGG - chr4.1:22392348-22392367 MS.gene26607:CDS 50.0%
TCAACGGTTGAGTTTGCACG+GGG + chr4.1:22393993-22394012 None:intergenic 50.0%
TGTCATGTGTGACACAGGCA+GGG - chr4.1:22393892-22393911 MS.gene26607:intron 50.0%
! CTTTCTGGTGCCCACACAAT+TGG - chr4.1:22394068-22394087 MS.gene26607:CDS 50.0%
!! TGAACCAGTGACTTGGTTCG+TGG + chr4.1:22394338-22394357 None:intergenic 50.0%
AAGAGGAGACGAATGGTGGC+AGG + chr4.1:22392136-22392155 None:intergenic 55.0%
CAACGGTTGAGTTTGCACGG+GGG + chr4.1:22393992-22394011 None:intergenic 55.0%
GTCATGTGTGACACAGGCAG+GGG - chr4.1:22393893-22393912 MS.gene26607:intron 55.0%
GTGGAAGAGGAGACGAATGG+TGG + chr4.1:22392140-22392159 None:intergenic 55.0%
TCATGTGTGACACAGGCAGG+GGG - chr4.1:22393894-22393913 MS.gene26607:intron 55.0%
TCTGCACAGGACACCACACT+AGG + chr4.1:22392445-22392464 None:intergenic 55.0%
TCTGCCAACTCCTTGCTTCC+TGG + chr4.1:22392337-22392356 None:intergenic 55.0%
TGAGTTTGCACGGGGGATGT+TGG + chr4.1:22393985-22394004 None:intergenic 55.0%
TGTGCGCGTGTGTGTGGAAT+TGG + chr4.1:22392183-22392202 None:intergenic 55.0%
ATGGTGGCAGGTCCAGAGAC+AGG + chr4.1:22392124-22392143 None:intergenic 60.0%
AGGCAAGGGGCAACCCGATC+CGG - chr4.1:22394136-22394155 MS.gene26607:CDS 65.0%
TGTGCGTGTGCGCGTGTGTG+TGG + chr4.1:22392189-22392208 None:intergenic 65.0%
! GATCGGGTTGCCCCTTGCCT+CGG + chr4.1:22394136-22394155 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 22392001 22394487 22392001 ID=MS.gene26607
chr4.1 mRNA 22392001 22394487 22392001 ID=MS.gene26607.t1;Parent=MS.gene26607
chr4.1 exon 22394314 22394487 22394314 ID=MS.gene26607.t1.exon1;Parent=MS.gene26607.t1
chr4.1 CDS 22394314 22394487 22394314 ID=cds.MS.gene26607.t1;Parent=MS.gene26607.t1
chr4.1 exon 22393987 22394187 22393987 ID=MS.gene26607.t1.exon2;Parent=MS.gene26607.t1
chr4.1 CDS 22393987 22394187 22393987 ID=cds.MS.gene26607.t1;Parent=MS.gene26607.t1
chr4.1 exon 22392001 22392579 22392001 ID=MS.gene26607.t1.exon3;Parent=MS.gene26607.t1
chr4.1 CDS 22392001 22392579 22392001 ID=cds.MS.gene26607.t1;Parent=MS.gene26607.t1
Gene Sequence

>MS.gene26607

ATGCTTAATAGCAAGACTACACGCATTCCTCGCCAGCTTAGCGTTAATTACTACGCCAAATCTTGTCCACAGGTAGAACAGCTTGTTGGTTCAGTCACCTCTCAACAATTCAAACAATCACCTGTCTCTGGACCTGCCACCATTCGTCTCCTCTTCCACGATTGCTTTGTAGAAGTAAGCCAATTCCACACACACGCGCACACGCACACAAACACAAATGTTTTTAGCTTTGCATGCAACTGTTGGTTTGTTTTCCTCAACCTCATTTTCAGGATTTCTGGTTTAAATGAGTGAATGCAGGGTTGTGATGCATCAATTTTAATAGCATCAAAGCCAGGAAGCAAGGAGTTGGCAGAGAAAGATGCAGAGGATAATAAAGATTTGAGGGTGGAAGGTTTTGAAACTATAAGGAAGGCCAAAGAAGTGGTGGAGAAAAAGTGTCCTAGTGTGGTGTCCTGTGCAGATATTCTTGCAATTGCAGCAAGAGATTTTGTGCACTTGGTAAGTTACTTGTTCATTGTTTCAATTTCATATATAATGATTACCACTAATTTGATTTAATATATTTTCATATGTTTCCTTTATTCCAATCGTAATTTTTGGCTTCATCCTTGTACTTGCGGTGAGTACAATATCGACAACCAGGGTTTAGTATTTGTTTAGGTCATGCCCTGAGAATGATCTCATCCTCCTGTGTCCTAACATTCTAAAATAAGGGCAGTTTGGTAATGCCTCCCCAGTAGTGCATTAAGTTTTGACATCAGATCACATGCAATACAAGTACAAAGTATCCCTGGTTTTGAAAGTTATTTTCTGATTTTTGATGTAACCATATTTGGCCCACTTAAATGGACACCAGAAAAGGGCAGAAATTAATTAAAATTTAAAAGTTTTGAATCTTAATATATTTTGAGTGCAGGCTCAATTTTTTCTTACATGTTCTCTTGCTGCATCTTTTTTGTTTCTTAGATAGCAGCTAGAAGAGACCGTTTCTAGATAAAATATGTGTTTTCCAACTTTACAGAATAACAGAGAAGCTTTATGAAATTACCAATTTAAATAAAAAGAAATGACTCTCAAACATTTAGGCCCTTGGTCTTTTGGTATATGAATAGGAAAAGGTGTTCTACATTTATTTATCATTTGTAACAATGTCATTACATAAAAATTTTGGAAAATAGATTTCTTTATTATAATGTAAAAAGACAATATTGCCAAATATTTTTTTTTTCCAACACCGTGACAAAAGAGCTAACAATTATATTGTAGAATAAATTAAACTTTCCATTTGTTAATTTGTCTAGCTAAAATGACACAGAATACGCTAGACATTGTTACAGGCTGGTGTTGATTCTATATTAACCAAAATCACATTAAGGTCGCTCTAGAGATTAGAAACGGACAAATCCCATGTTGGTATTGGTTAAGAGGTTTTCCTACATTAAAAATACAAAAATCCCACACTATAATATTAATTGTAGTTTTGGCAGTTAGCAGAGTGACTGTTTCATACAAGGGCTCTGCATAAAGTCAAATTGAATCTGTTTTCATGTTGTCATATACTGTTTGGTATATTAGACTCTAAAACAGCCGAATTTTTGTACTTTACGTTGAATTTTATTTAGACACCCACCAATTACAACACCTGCTTAATTTTATAGGTCCAAGTCCAATTTTCAGTATTATTGTTCTTTTCTATGCCATATCATATCAGATGGATAGATACACGTAGCAGCTTAACACTATGACAGAAAAAAAGTTCAGTTAAAGAAACCAAATAAAAACATTAAAACAAAACACTGCTATTTTCTGTTAAGAAACGGTTAATTATGCTGAGTTTATATTATGTTCTGTTAAGAAATGGTTAATTATACAGGGTTTAATTTCAGTATGTCATGTGTGACACAGGCAGGGGGACCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTAGGGTCCAACATCCCCCGTGCAAACTCAACCGTTGATGAGCTCATCAAAATCTTCAATTCAAAAGGCTTAACCATACAGGACATGGTTGCTCTTTCTGGTGCCCACACAATTGGATTTGCTCATTGCAAGAACTTTTTGACTCGCCTCTACAATTACCGAGGCAAGGGGCAACCCGATCCGGATATGAACCCTAAACTATTGAAAGCTCTTAGAATGTACTGCCCAAATTTTGGTGGAAACACGGACATTGTTGCCCCATTTGATGCAACTACTCCTTTCATATTTGACCATGCGTATTATGGTAACTTGCAGAACAAGATGGGGCTGCTAGCATCTGACCAAGCTTTGGCTTTAGATCCACGAACCAAGTCACTGGTTCAAGATTTTGCGAAGGATAAACAAAAGTTTTTTCAAGCTTTTGCATCTGCTATAGACAAAATGAGTTTAGTGAAAGTTGTGAGAGGAAAAAAGCATGGGGAGAGAAGGAGAGATTGTAGCATGCATATGTGA
Protein sequence

>MS.gene26607.t1

MLNSKTTRIPRQLSVNYYAKSCPQVEQLVGSVTSQQFKQSPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRVEGFETIRKAKEVVEKKCPSVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTVDELIKIFNSKGLTIQDMVALSGAHTIGFAHCKNFLTRLYNYRGKGQPDPDMNPKLLKALRMYCPNFGGNTDIVAPFDATTPFIFDHAYYGNLQNKMGLLASDQALALDPRTKSLVQDFAKDKQKFFQAFASAIDKMSLVKVVRGKKHGERRRDCSMHM