Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29619.t1 | XP_003616603.2 | 98.2 | 446 | 8 | 0 | 2 | 447 | 69 | 514 | 9.90E-246 | 859 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29619.t1 | Q0JQS5 | 73.7 | 403 | 105 | 1 | 45 | 447 | 143 | 544 | 1.9e-176 | 620.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29619.t1 | G7KGX9 | 98.2 | 446 | 8 | 0 | 2 | 447 | 69 | 514 | 7.1e-246 | 859.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene29619 | 0.803594 | 3.24E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene29619 | 0.868138 | 8.16E-66 | -1.69E-46 |
| MS.gene049491 | MS.gene29619 | 0.804574 | 2.02E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene29619 | 0.835956 | 1.24E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene29619 | 0.825289 | 5.08E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene29619 | 0.803195 | 3.91E-49 | -1.69E-46 |
| MS.gene050404 | MS.gene29619 | 0.806037 | 9.99E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene29619 | 0.825708 | 4.05E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene29619 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene050747 | MS.gene29619 | 0.805481 | 1.31E-49 | -1.69E-46 |
| MS.gene050770 | MS.gene29619 | 0.802596 | 5.20E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene29619 | 0.820376 | 7.09E-53 | -1.69E-46 |
| MS.gene050812 | MS.gene29619 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene29619 | 0.818909 | 1.53E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene29619 | 0.831401 | 1.70E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene29619 | 0.813213 | 2.87E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene29619 | 0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene29619 | 0.814414 | 1.56E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene29619 | 0.816136 | 6.46E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene29619 | 0.843091 | 1.73E-58 | -1.69E-46 |
| MS.gene052322 | MS.gene29619 | 0.809975 | 1.45E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene29619 | 0.810381 | 1.19E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene29619 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene29619 | 0.82476 | 6.78E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene29619 | 0.805127 | 1.55E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene29619 | 0.81756 | 3.10E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene29619 | 0.849908 | 2.39E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene29619 | 0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene29619 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene29619 | 0.803435 | 3.49E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene29619 | 0.800151 | 1.65E-48 | -1.69E-46 |
| MS.gene053207 | MS.gene29619 | 0.81719 | 3.75E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene29619 | 0.824232 | 9.02E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene29619 | 0.817743 | 2.81E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene29619 | 0.829661 | 4.54E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene29619 | 0.812939 | 3.29E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene29619 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene29619 | 0.819036 | 1.43E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene29619 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene29619 | 0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene29619 | 0.836739 | 7.84E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene29619 | 0.80275 | 4.84E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene29619 | 0.80041 | 1.46E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene29619 | 0.827163 | 1.82E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene29619 | 0.802105 | 6.57E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene29619 | 0.811887 | 5.59E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene29619 | 0.806167 | 9.38E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene29619 | 0.805351 | 1.39E-49 | -1.69E-46 |
| MS.gene056664 | MS.gene29619 | 0.802653 | 5.07E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene29619 | 0.812603 | 3.90E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene29619 | 0.813833 | 2.10E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene29619 | 0.847915 | 8.55E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene29619 | 0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene29619 | 0.80533 | 1.41E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene29619 | 0.805666 | 1.20E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene29619 | 0.804833 | 1.79E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene29619 | 0.852138 | 5.62E-61 | -1.69E-46 |
| MS.gene057331 | MS.gene29619 | 0.826316 | 2.90E-54 | -1.69E-46 |
| MS.gene057332 | MS.gene29619 | 0.801083 | 1.06E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene29619 | 0.846855 | 1.67E-59 | -1.69E-46 |
| MS.gene057658 | MS.gene29619 | 0.803728 | 3.04E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene29619 | 0.830658 | 2.59E-55 | -1.69E-46 |
| MS.gene058233 | MS.gene29619 | 0.832263 | 1.04E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene29619 | 0.81074 | 9.92E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene29619 | 0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene29619 | 0.837964 | 3.81E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene29619 | 0.806424 | 8.28E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene29619 | 0.803137 | 4.02E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene29619 | 0.850183 | 2.00E-60 | -1.69E-46 |
| MS.gene059141 | MS.gene29619 | 0.802292 | 6.01E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene29619 | 0.831896 | 1.29E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene29619 | 0.806774 | 6.98E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene29619 | 0.828912 | 6.91E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene29619 | 0.8282 | 1.03E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene29619 | 0.831265 | 1.84E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene29619 | 0.80139 | 9.21E-49 | -1.69E-46 |
| MS.gene059756 | MS.gene29619 | 0.803637 | 3.17E-49 | -1.69E-46 |
| MS.gene059858 | MS.gene29619 | 0.824743 | 6.84E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene29619 | 0.837677 | 4.51E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene29619 | 0.810359 | 1.20E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene29619 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene29619 | 0.813292 | 2.76E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene29619 | 0.810594 | 1.07E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene29619 | 0.829408 | 5.23E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene29619 | 0.80784 | 4.15E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29619.t1 | MTR_5g082260 | 98.206 | 446 | 8 | 0 | 2 | 447 | 69 | 514 | 0.0 | 874 |
| MS.gene29619.t1 | MTR_7g086430 | 30.788 | 419 | 250 | 7 | 48 | 434 | 115 | 525 | 1.00e-46 | 169 |
| MS.gene29619.t1 | MTR_7g086430 | 30.464 | 302 | 170 | 7 | 48 | 317 | 115 | 408 | 4.74e-30 | 121 |
| MS.gene29619.t1 | MTR_4g010130 | 27.623 | 467 | 292 | 14 | 2 | 434 | 91 | 545 | 1.82e-28 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29619.t1 | AT5G05740 | 70.089 | 448 | 118 | 2 | 2 | 439 | 76 | 517 | 0.0 | 626 |
| MS.gene29619.t1 | AT5G05740 | 70.089 | 448 | 118 | 2 | 2 | 439 | 73 | 514 | 0.0 | 626 |
| MS.gene29619.t1 | AT5G05740 | 65.828 | 477 | 118 | 3 | 2 | 439 | 76 | 546 | 0.0 | 612 |
| MS.gene29619.t1 | AT5G35220 | 28.387 | 465 | 293 | 8 | 4 | 434 | 73 | 531 | 2.57e-49 | 176 |
| MS.gene29619.t1 | AT1G17870 | 27.078 | 421 | 264 | 11 | 49 | 434 | 140 | 552 | 2.00e-22 | 100 |
| MS.gene29619.t1 | AT5G35210 | 39.316 | 117 | 68 | 1 | 243 | 356 | 1545 | 1661 | 5.02e-16 | 81.6 |
Find 108 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGGGTTTCATCTATAAA+TGG | 0.131698 | 5.2:-70239579 | None:intergenic |
| GGTCTTGTTCTTCTGCTTCT+AGG | 0.158404 | 5.2:+70237496 | MS.gene29619:CDS |
| CAATAAATCGGATTGCAAAT+TGG | 0.179236 | 5.2:-70236460 | None:intergenic |
| CAAGCTTAACTCCAAGGTTT+TGG | 0.213368 | 5.2:-70236959 | None:intergenic |
| TGACAATCTGAATTTGTTAA+AGG | 0.219792 | 5.2:+70236866 | MS.gene29619:CDS |
| TCATCTGATAGAGGAGAAAT+TGG | 0.248471 | 5.2:-70239471 | None:intergenic |
| ACAAGAGGGTTGATAGAAAT+TGG | 0.269455 | 5.2:-70237801 | None:intergenic |
| CATTTGTTATAGGATAAATT+TGG | 0.280363 | 5.2:+70236177 | MS.gene29619:intron |
| CTATCAACCCTCTTGTGATC+TGG | 0.284156 | 5.2:+70237808 | MS.gene29619:CDS |
| AATAAATCGGATTGCAAATT+GGG | 0.290251 | 5.2:-70236459 | None:intergenic |
| CTTGTTACTGCACTTATTAT+CGG | 0.320323 | 5.2:+70236906 | MS.gene29619:CDS |
| ACCCTCTTGTGATCTGGGCT+TGG | 0.322194 | 5.2:+70237814 | MS.gene29619:CDS |
| AAATGGAGAAACACAATCTT+TGG | 0.324342 | 5.2:+70233240 | MS.gene29619:CDS |
| CCCTCTTGTGATCTGGGCTT+GGG | 0.337951 | 5.2:+70237815 | MS.gene29619:CDS |
| TGGTGGCAGATAGGCTCTTT+TGG | 0.338317 | 5.2:+70237385 | MS.gene29619:intron |
| CATCCTCAGGATTGACTAGA+AGG | 0.346366 | 5.2:-70236218 | None:intergenic |
| TGGTTTGGTGCTGCGTCTTT+TGG | 0.348500 | 5.2:+70236399 | MS.gene29619:CDS |
| TATCAACCCTCTTGTGATCT+GGG | 0.351252 | 5.2:+70237809 | MS.gene29619:CDS |
| TCTGGTTGTAAAGTAGTTCT+TGG | 0.370039 | 5.2:-70236264 | None:intergenic |
| GCAGCTGCTGGACCAATTGC+CGG | 0.374813 | 5.2:+70237463 | MS.gene29619:CDS |
| TTGTTAAAGGATGGCCTACC+TGG | 0.381827 | 5.2:+70236879 | MS.gene29619:CDS |
| TCCCTAACAGCCTCAACAAC+TGG | 0.384146 | 5.2:+70235811 | MS.gene29619:intron |
| TTGTTACTGCACTTATTATC+GGG | 0.385893 | 5.2:+70236907 | MS.gene29619:CDS |
| CGATACCTTTCTTCCCCATA+TGG | 0.388554 | 5.2:-70237907 | None:intergenic |
| CCAATTGCCGGATTTGCATT+GGG | 0.393078 | 5.2:+70237475 | MS.gene29619:CDS |
| ATAAATTTGGAGATGAATAC+AGG | 0.402996 | 5.2:+70236190 | MS.gene29619:CDS |
| CAAGGGTTTCATCTATAAAT+GGG | 0.405206 | 5.2:-70239578 | None:intergenic |
| TTGCTCAAGATTGCAGCTGC+TGG | 0.406860 | 5.2:+70237451 | MS.gene29619:CDS |
| TTTAGCTGTTCTGCATCTAC+AGG | 0.415775 | 5.2:-70233292 | None:intergenic |
| AACAAGACCCAATGCAAATC+CGG | 0.416938 | 5.2:-70237482 | None:intergenic |
| ACCAATTGCCGGATTTGCAT+TGG | 0.418392 | 5.2:+70237474 | MS.gene29619:CDS |
| TTAATGATGTAGCTTTCTAC+TGG | 0.420976 | 5.2:+70239418 | MS.gene29619:CDS |
| CTTGTGATCTGGGCTTGGGC+AGG | 0.421611 | 5.2:+70237819 | MS.gene29619:CDS |
| CACACACCTCGTAAGGATCT+TGG | 0.435624 | 5.2:-70235916 | None:intergenic |
| CAGGCTTCAATTCGCTTCAC+AGG | 0.436252 | 5.2:+70239360 | MS.gene29619:intron |
| CCCAATGCAAATCCGGCAAT+TGG | 0.439644 | 5.2:-70237475 | None:intergenic |
| TCCAGCGGGAATACTGTTGA+TGG | 0.441942 | 5.2:-70237856 | None:intergenic |
| TCCCGTACTTTGTTCCTAGC+TGG | 0.456423 | 5.2:+70236985 | MS.gene29619:CDS |
| GTACTTTGTTCCTAGCTGGC+AGG | 0.463565 | 5.2:+70236989 | MS.gene29619:CDS |
| CTTGGAACGACAACGGCCAC+TGG | 0.467933 | 5.2:-70236246 | None:intergenic |
| TACAAATCAAAATGATGTGC+AGG | 0.470961 | 5.2:+70233333 | MS.gene29619:CDS |
| TCATTTCTAGCTGGCGGCAT+TGG | 0.472509 | 5.2:+70237580 | MS.gene29619:CDS |
| TGTTCTGCATCTACAGGTGG+AGG | 0.473670 | 5.2:-70233286 | None:intergenic |
| CAAAACCTTGGAGTTAAGCT+TGG | 0.474152 | 5.2:+70236960 | MS.gene29619:CDS |
| TTAGCTGTACCTGAGTGGTT+TGG | 0.476022 | 5.2:+70236384 | MS.gene29619:intron |
| TCAGTTATTTCATCTGATAG+AGG | 0.476396 | 5.2:-70239480 | None:intergenic |
| TTTCTAGTTGCCCAAAACCT+TGG | 0.479583 | 5.2:+70236948 | MS.gene29619:CDS |
| AAGTAAGTACGAGTTGTCTC+TGG | 0.481786 | 5.2:-70236282 | None:intergenic |
| GCCACTGGCTTATCATCCTC+AGG | 0.483050 | 5.2:-70236231 | None:intergenic |
| TCTATAAATGGGAAAGGGTA+TGG | 0.488120 | 5.2:-70239567 | None:intergenic |
| TGCCAGCTAGGAACAAAGTA+CGG | 0.492497 | 5.2:-70236987 | None:intergenic |
| ATTCCCGCTGGAGAAATTGA+TGG | 0.493577 | 5.2:+70237867 | MS.gene29619:CDS |
| GCCAGTGGATCACCTCTGCC+AGG | 0.499435 | 5.2:+70235682 | MS.gene29619:CDS |
| CTGATATTCTTCTTGCAAAG+AGG | 0.500793 | 5.2:+70239447 | MS.gene29619:CDS |
| AGAGCAACATACTTGTCATC+AGG | 0.510930 | 5.2:-70239504 | None:intergenic |
| CGATAATAAGTGCAGTAACA+AGG | 0.511270 | 5.2:-70236905 | None:intergenic |
| ATTATCGGGGTACATGAACT+TGG | 0.511624 | 5.2:+70236921 | MS.gene29619:CDS |
| CCTCCATCAATTTCTCCAGC+GGG | 0.528767 | 5.2:-70237870 | None:intergenic |
| CTTGGTAACGTTCTCAAGGA+AGG | 0.529950 | 5.2:+70237774 | MS.gene29619:CDS |
| AATCTGAATTTGTTAAAGGA+TGG | 0.531461 | 5.2:+70236870 | MS.gene29619:CDS |
| TATCATACAACCTGCCAGCT+AGG | 0.533569 | 5.2:-70236999 | None:intergenic |
| ATACCTCCAAGTGACGGTAT+TGG | 0.534054 | 5.2:+70237526 | MS.gene29619:CDS |
| AGATAGGCACACACCTCGTA+AGG | 0.537678 | 5.2:-70235923 | None:intergenic |
| ATTACATCATCCAGTTGTTG+AGG | 0.540848 | 5.2:-70235821 | None:intergenic |
| AGTGCAGTAACAAGGGCTCC+AGG | 0.541596 | 5.2:-70236897 | None:intergenic |
| TTTCACGAGTCATTTCTAGC+TGG | 0.544995 | 5.2:+70237571 | MS.gene29619:CDS |
| TTTCATCTATAAATGGGAAA+GGG | 0.545765 | 5.2:-70239572 | None:intergenic |
| GGGGACATTGCGAAGCAGTA+AGG | 0.546571 | 5.2:-70236439 | None:intergenic |
| GTTTCATCTATAAATGGGAA+AGG | 0.548267 | 5.2:-70239573 | None:intergenic |
| CACGAGTCATTTCTAGCTGG+CGG | 0.551293 | 5.2:+70237574 | MS.gene29619:CDS |
| AGCTGTTCTGCATCTACAGG+TGG | 0.557660 | 5.2:-70233289 | None:intergenic |
| CCCTCCATCAATTTCTCCAG+CGG | 0.559231 | 5.2:-70237871 | None:intergenic |
| TGGAGAAACACAATCTTTGG+AGG | 0.560871 | 5.2:+70233243 | MS.gene29619:CDS |
| ATCACCTCTGCCAGGTGTGA+AGG | 0.562627 | 5.2:+70235690 | MS.gene29619:CDS |
| ACCTGGCAGAGGTGATCCAC+TGG | 0.563174 | 5.2:-70235683 | None:intergenic |
| GTTTCTTGGTAACGTTCTCA+AGG | 0.570500 | 5.2:+70237770 | MS.gene29619:CDS |
| GCCATCAACAGTATTCCCGC+TGG | 0.575199 | 5.2:+70237855 | MS.gene29619:CDS |
| GCCAGCTAGGAACAAAGTAC+GGG | 0.582312 | 5.2:-70236986 | None:intergenic |
| ACACCAATACCGTCACTTGG+AGG | 0.583153 | 5.2:-70237529 | None:intergenic |
| AATATAATCACCTTCACACC+TGG | 0.583486 | 5.2:-70235700 | None:intergenic |
| GATGACAAGTATGTTGCTCT+CGG | 0.586737 | 5.2:+70239507 | MS.gene29619:CDS |
| TGTTACTGCACTTATTATCG+GGG | 0.591294 | 5.2:+70236908 | MS.gene29619:CDS |
| ATCACCTTCACACCTGGCAG+AGG | 0.594663 | 5.2:-70235694 | None:intergenic |
| ACAACACCAATACCGTCACT+TGG | 0.597252 | 5.2:-70237532 | None:intergenic |
| GATAATAAGTGCAGTAACAA+GGG | 0.601874 | 5.2:-70236904 | None:intergenic |
| ACTGTTTCTAGAAACTTGCA+AGG | 0.605257 | 5.2:-70239596 | None:intergenic |
| GGACTCCAAGCTTAACTCCA+AGG | 0.609370 | 5.2:-70236965 | None:intergenic |
| GCCCAAGCCCAGATCACAAG+AGG | 0.612324 | 5.2:-70237816 | None:intergenic |
| TAGGGTGGAGTGCTATTCAA+AGG | 0.612392 | 5.2:+70236014 | MS.gene29619:intron |
| CCCGCTGGAGAAATTGATGG+AGG | 0.614785 | 5.2:+70237870 | MS.gene29619:CDS |
| TTTCCTTCTAGTCAATCCTG+AGG | 0.617367 | 5.2:+70236215 | MS.gene29619:CDS |
| CCGCTGGAGAAATTGATGGA+GGG | 0.622971 | 5.2:+70237871 | MS.gene29619:CDS |
| CTGTTTCTAGAAACTTGCAA+GGG | 0.625123 | 5.2:-70239595 | None:intergenic |
| TAATGATGTAGCTTTCTACT+GGG | 0.625802 | 5.2:+70239419 | MS.gene29619:CDS |
| CAGTAACAAGGGCTCCAGGT+AGG | 0.628013 | 5.2:-70236893 | None:intergenic |
| TTTGTTATACCTCCAAGTGA+CGG | 0.635773 | 5.2:+70237520 | MS.gene29619:CDS |
| GACGCAGCACCAAACCACTC+AGG | 0.637018 | 5.2:-70236393 | None:intergenic |
| GTTCTGCATCTACAGGTGGA+GGG | 0.651010 | 5.2:-70233285 | None:intergenic |
| TGGAGGGTTACTTTGCTCAG+AGG | 0.654797 | 5.2:-70233269 | None:intergenic |
| TCCTGAGGATGATAAGCCAG+TGG | 0.661607 | 5.2:+70236230 | MS.gene29619:CDS |
| TACTGTTGATGGCATTGATG+AGG | 0.664732 | 5.2:-70237845 | None:intergenic |
| ATAAATCGGATTGCAAATTG+GGG | 0.665060 | 5.2:-70236458 | None:intergenic |
| CTATTCAAAGGAAACCTGCG+AGG | 0.678472 | 5.2:+70236026 | MS.gene29619:CDS |
| AGTAGTTCTTGGAACGACAA+CGG | 0.680756 | 5.2:-70236253 | None:intergenic |
| CCCAAGCCCAGATCACAAGA+GGG | 0.683801 | 5.2:-70237815 | None:intergenic |
| GATAACATAGAAGTTGCCAG+TGG | 0.714256 | 5.2:+70235667 | MS.gene29619:CDS |
| TATTCAAAGGAAACCTGCGA+GGG | 0.723688 | 5.2:+70236027 | MS.gene29619:CDS |
| AACAAGCCAAGATCCTTACG+AGG | 0.757784 | 5.2:+70235910 | MS.gene29619:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGTTTATATTTTATTGA+AGG | - | chr5.2:70237161-70237180 | None:intergenic | 10.0% |
| !! | ATAAAATATAAACTATTCAG+AGG | + | chr5.2:70237164-70237183 | MS.gene29619:intron | 15.0% |
| !! | ATATAACACAAAAAAAATTG+TGG | - | chr5.2:70235083-70235102 | None:intergenic | 15.0% |
| !! | GTTTCTTAAATAATACTATT+AGG | + | chr5.2:70239152-70239171 | MS.gene29619:intron | 15.0% |
| !! | TAGAAGAAAAATATTTAGAA+GGG | + | chr5.2:70234469-70234488 | MS.gene29619:intron | 15.0% |
| !! | TTATGTTAGAAATTTCAAAT+CGG | - | chr5.2:70234603-70234622 | None:intergenic | 15.0% |
| !! | TTCAAATTATCATTAAACTT+TGG | - | chr5.2:70238029-70238048 | None:intergenic | 15.0% |
| !! | TTTACATGATATATATTAGA+TGG | - | chr5.2:70237126-70237145 | None:intergenic | 15.0% |
| !! | TTTATTTATCGTAGAATAAT+AGG | - | chr5.2:70234075-70234094 | None:intergenic | 15.0% |
| !!! | TACAAAAATATTGATCTTTT+AGG | + | chr5.2:70236657-70236676 | MS.gene29619:intron | 15.0% |
| !! | AAAAATAAATACTATGTTCC+TGG | + | chr5.2:70233486-70233505 | MS.gene29619:intron | 20.0% |
| !! | AACATAAGAGATATGAAAAA+AGG | - | chr5.2:70235761-70235780 | None:intergenic | 20.0% |
| !! | ACATAAGAGATATGAAAAAA+GGG | - | chr5.2:70235760-70235779 | None:intergenic | 20.0% |
| !! | AGATTCAAATTGACAAAATT+TGG | + | chr5.2:70237267-70237286 | MS.gene29619:intron | 20.0% |
| !! | CAACATTAATATGTTGAAAA+AGG | + | chr5.2:70238239-70238258 | MS.gene29619:intron | 20.0% |
| !! | CCACATAATTTAATATGTTA+TGG | + | chr5.2:70237234-70237253 | MS.gene29619:intron | 20.0% |
| !! | CCATAACATATTAAATTATG+TGG | - | chr5.2:70237237-70237256 | None:intergenic | 20.0% |
| !! | CTAGAAGAAAAATATTTAGA+AGG | + | chr5.2:70234468-70234487 | MS.gene29619:intron | 20.0% |
| !! | CTTGACTATTATATTCAATT+TGG | + | chr5.2:70233361-70233380 | MS.gene29619:intron | 20.0% |
| !! | GATGCATATAATAAACTTTA+GGG | + | chr5.2:70237186-70237205 | MS.gene29619:intron | 20.0% |
| !! | GTAATCAAAAATATAATTCC+AGG | - | chr5.2:70233507-70233526 | None:intergenic | 20.0% |
| !! | GTTTAAAAATTGTATTGTCA+AGG | - | chr5.2:70233195-70233214 | None:intergenic | 20.0% |
| !! | TAAGAAATGAAACAGAAATA+TGG | - | chr5.2:70236100-70236119 | None:intergenic | 20.0% |
| !! | TATTAGGATATTTAATTGAG+TGG | + | chr5.2:70239168-70239187 | MS.gene29619:intron | 20.0% |
| !! | TGAGATAATCTTTATCAATT+TGG | - | chr5.2:70235492-70235511 | None:intergenic | 20.0% |
| !! | TTACACATAAAAAGAAGTAA+AGG | - | chr5.2:70239317-70239336 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTTTAAATCTTGG+TGG | + | chr5.2:70239030-70239049 | MS.gene29619:intron | 20.0% |
| !!! | AAGAAGTTCAAAATTTTCAA+TGG | + | chr5.2:70234741-70234760 | MS.gene29619:intron | 20.0% |
| !!! | AAGATTGGAAATTTTAATTG+AGG | + | chr5.2:70234559-70234578 | MS.gene29619:intron | 20.0% |
| !!! | AGAAATTTTGATGCTTAATT+TGG | + | chr5.2:70237365-70237384 | MS.gene29619:intron | 20.0% |
| !!! | AGATGATTTTTTTAGAGTTT+AGG | + | chr5.2:70233558-70233577 | MS.gene29619:intron | 20.0% |
| !!! | AGATTGGAAATTTTAATTGA+GGG | + | chr5.2:70234560-70234579 | MS.gene29619:intron | 20.0% |
| !!! | ATAATAAATTGCTATGCTTT+TGG | + | chr5.2:70234646-70234665 | MS.gene29619:intron | 20.0% |
| !!! | ATTTAAAAACTTTTTGTGGA+GGG | - | chr5.2:70239025-70239044 | None:intergenic | 20.0% |
| !!! | CAAGATTTAAAAACTTTTTG+TGG | - | chr5.2:70239029-70239048 | None:intergenic | 20.0% |
| !!! | CACAAAAAGTTTTTAAATCT+TGG | + | chr5.2:70239027-70239046 | MS.gene29619:intron | 20.0% |
| !!! | CATTTGTTATAGGATAAATT+TGG | + | chr5.2:70236177-70236196 | MS.gene29619:intron | 20.0% |
| !!! | GAACATCAACAATAATATTT+TGG | - | chr5.2:70236834-70236853 | None:intergenic | 20.0% |
| !!! | TAATAAATTGCTATGCTTTT+GGG | + | chr5.2:70234647-70234666 | MS.gene29619:intron | 20.0% |
| !!! | TACAATTTTTAAACTTACGT+AGG | + | chr5.2:70233201-70233220 | MS.gene29619:intron | 20.0% |
| !!! | TATAGTTTATTGTTATTGCT+TGG | + | chr5.2:70238453-70238472 | MS.gene29619:intron | 20.0% |
| !!! | TATTTGAGATGATGAATATT+TGG | + | chr5.2:70235020-70235039 | MS.gene29619:intron | 20.0% |
| !!! | TCTTTTTTATTTTCTACTCA+TGG | + | chr5.2:70236334-70236353 | MS.gene29619:intron | 20.0% |
| !!! | TTAATAATTTCTTTTCACTC+TGG | + | chr5.2:70233761-70233780 | MS.gene29619:intron | 20.0% |
| !!! | TTTTATTTTTCTGTTCATGA+TGG | - | chr5.2:70235551-70235570 | None:intergenic | 20.0% |
| ! | AAAACTTTGATACCTCTATT+GGG | - | chr5.2:70233975-70233994 | None:intergenic | 25.0% |
| ! | AAACTAAATAGAGGAAAGAT+AGG | - | chr5.2:70235942-70235961 | None:intergenic | 25.0% |
| ! | AAATGTATATTCATACATGC+AGG | - | chr5.2:70239213-70239232 | None:intergenic | 25.0% |
| ! | AAATTGTATTGTCAAGGAAA+AGG | - | chr5.2:70233189-70233208 | None:intergenic | 25.0% |
| ! | AAGTGTAACTAACAAAAATC+AGG | - | chr5.2:70235418-70235437 | None:intergenic | 25.0% |
| ! | AATAAATCGGATTGCAAATT+GGG | - | chr5.2:70236462-70236481 | None:intergenic | 25.0% |
| ! | ACATAAAAAGAAGTAAAGGA+AGG | - | chr5.2:70239313-70239332 | None:intergenic | 25.0% |
| ! | ACTCATAATTCATGAAAGAA+GGG | + | chr5.2:70235178-70235197 | MS.gene29619:intron | 25.0% |
| ! | ATAAATTTGGAGATGAATAC+AGG | + | chr5.2:70236190-70236209 | MS.gene29619:CDS | 25.0% |
| ! | ATCCTTAAAAATCAAGTGTT+TGG | + | chr5.2:70235869-70235888 | MS.gene29619:CDS | 25.0% |
| ! | ATTATGTGGTTTGAAAAAAC+AGG | - | chr5.2:70237223-70237242 | None:intergenic | 25.0% |
| ! | ATTCCTTCAAGTAAATTTCA+AGG | + | chr5.2:70236607-70236626 | MS.gene29619:intron | 25.0% |
| ! | CAAAATAATAGCTCCAAATT+TGG | + | chr5.2:70238284-70238303 | MS.gene29619:intron | 25.0% |
| ! | CAGACAAAATTTACTTGATT+TGG | - | chr5.2:70233915-70233934 | None:intergenic | 25.0% |
| ! | CATAGCAATTTATTATGCAT+TGG | - | chr5.2:70234642-70234661 | None:intergenic | 25.0% |
| ! | CTAAATTAAATCCTTGAAAC+AGG | + | chr5.2:70235391-70235410 | MS.gene29619:intron | 25.0% |
| ! | GAAAAATGCTCACAATAAAT+CGG | - | chr5.2:70236475-70236494 | None:intergenic | 25.0% |
| ! | GAATAATGTCATCTTTGAAT+CGG | - | chr5.2:70238358-70238377 | None:intergenic | 25.0% |
| ! | GCATATGAAAAACTAAATAG+AGG | - | chr5.2:70235951-70235970 | None:intergenic | 25.0% |
| ! | GGATGCATATAATAAACTTT+AGG | + | chr5.2:70237185-70237204 | MS.gene29619:intron | 25.0% |
| ! | GTACAATAGATGAGAAAATT+AGG | - | chr5.2:70235619-70235638 | None:intergenic | 25.0% |
| ! | GTATGATTTATTCCTATGAA+AGG | - | chr5.2:70236749-70236768 | None:intergenic | 25.0% |
| ! | GTTACAAGGAATAATAAACA+CGG | - | chr5.2:70234921-70234940 | None:intergenic | 25.0% |
| ! | TACTCATAATTCATGAAAGA+AGG | + | chr5.2:70235177-70235196 | MS.gene29619:intron | 25.0% |
| ! | TATCCTTGAAATTTACTTGA+AGG | - | chr5.2:70236613-70236632 | None:intergenic | 25.0% |
| ! | TCAACAAGACATAAAACAAA+AGG | - | chr5.2:70233436-70233455 | None:intergenic | 25.0% |
| ! | TCATACTCTATTATCTCTTA+GGG | + | chr5.2:70236515-70236534 | MS.gene29619:intron | 25.0% |
| ! | TGAAATAACACTCATTAATC+TGG | - | chr5.2:70238773-70238792 | None:intergenic | 25.0% |
| ! | TGATGTAATAAAAATTCCCA+AGG | + | chr5.2:70235835-70235854 | MS.gene29619:CDS | 25.0% |
| ! | TTAGACAAATAACAAAGACA+TGG | - | chr5.2:70235375-70235394 | None:intergenic | 25.0% |
| ! | TTCAATATTTCCTATGTTAG+AGG | + | chr5.2:70235728-70235747 | MS.gene29619:intron | 25.0% |
| ! | TTCATACTCTATTATCTCTT+AGG | + | chr5.2:70236514-70236533 | MS.gene29619:intron | 25.0% |
| ! | TTTCATCTATAAATGGGAAA+GGG | - | chr5.2:70239575-70239594 | None:intergenic | 25.0% |
| ! | TTTCTCATCTATTGTACTTT+GGG | + | chr5.2:70235622-70235641 | MS.gene29619:intron | 25.0% |
| !! | AAATAATGCCACTTATTCAT+TGG | + | chr5.2:70234783-70234802 | MS.gene29619:intron | 25.0% |
| !! | AATAAATTGCTATGCTTTTG+GGG | + | chr5.2:70234648-70234667 | MS.gene29619:intron | 25.0% |
| !! | AGGCTTTATGTTTATTTAAC+AGG | + | chr5.2:70236677-70236696 | MS.gene29619:intron | 25.0% |
| !! | CATATAATAAACTTTAGGGA+TGG | + | chr5.2:70237190-70237209 | MS.gene29619:intron | 25.0% |
| !! | CTTTGTTATCGTAGAATAAT+AGG | - | chr5.2:70234023-70234042 | None:intergenic | 25.0% |
| !! | GAAAAGGTATGAAAAAACAA+AGG | - | chr5.2:70233173-70233192 | None:intergenic | 25.0% |
| !! | GATGGAAAAGATTGTAATTT+TGG | - | chr5.2:70235533-70235552 | None:intergenic | 25.0% |
| !! | GATTTAAAAACTTTTTGTGG+AGG | - | chr5.2:70239026-70239045 | None:intergenic | 25.0% |
| !! | TGAGATATTGAATAGTTTGT+TGG | + | chr5.2:70233860-70233879 | MS.gene29619:intron | 25.0% |
| !! | TTTTCTCATCTATTGTACTT+TGG | + | chr5.2:70235621-70235640 | MS.gene29619:intron | 25.0% |
| !!! | AATATTTTTGTACCCAAACA+TGG | - | chr5.2:70236649-70236668 | None:intergenic | 25.0% |
| !!! | AATCTGAATTTGTTAAAGGA+TGG | + | chr5.2:70236870-70236889 | MS.gene29619:CDS | 25.0% |
| !!! | AATTTTGATGCTTAATTTGG+TGG | + | chr5.2:70237368-70237387 | MS.gene29619:intron | 25.0% |
| !!! | AGTATCGATTTTATCTCAAA+TGG | - | chr5.2:70237986-70238005 | None:intergenic | 25.0% |
| !!! | ATCTGCATAACATTTGTTAT+AGG | + | chr5.2:70236167-70236186 | MS.gene29619:intron | 25.0% |
| !!! | ATTAAGCATATTTGTTTCTG+TGG | + | chr5.2:70235221-70235240 | MS.gene29619:intron | 25.0% |
| !!! | TGACAATCTGAATTTGTTAA+AGG | + | chr5.2:70236866-70236885 | MS.gene29619:CDS | 25.0% |
| !!! | TTAGTTTTTCATATGCTCAA+AGG | + | chr5.2:70235955-70235974 | MS.gene29619:intron | 25.0% |
| !!! | TTATTTTGATCTTGACTCTT+AGG | + | chr5.2:70237943-70237962 | MS.gene29619:intron | 25.0% |
| !!! | TTCTAGTTTTATTCACTTGT+AGG | - | chr5.2:70234454-70234473 | None:intergenic | 25.0% |
| AAAAATCTGCACAACAAAGA+AGG | - | chr5.2:70235137-70235156 | None:intergenic | 30.0% | |
| AAAATCTGCACAACAAAGAA+GGG | - | chr5.2:70235136-70235155 | None:intergenic | 30.0% | |
| AAACTCTGTTCTTAAGAGTA+AGG | + | chr5.2:70235583-70235602 | MS.gene29619:intron | 30.0% | |
| AAATGGAGAAACACAATCTT+TGG | + | chr5.2:70233240-70233259 | MS.gene29619:CDS | 30.0% | |
| AAGGAAGGCAATGATATAAA+TGG | - | chr5.2:70239298-70239317 | None:intergenic | 30.0% | |
| AATCTTGGCAAATGTGTATT+GGG | - | chr5.2:70234186-70234205 | None:intergenic | 30.0% | |
| ACTTAACTCCTTCAAAATTG+TGG | + | chr5.2:70236301-70236320 | MS.gene29619:intron | 30.0% | |
| AGAAGGGAAAACTTTGTTAA+GGG | + | chr5.2:70234485-70234504 | MS.gene29619:intron | 30.0% | |
| AGTCAAGAAACCAAGTATAT+GGG | + | chr5.2:70233692-70233711 | MS.gene29619:intron | 30.0% | |
| AGTGATTGTTAAACCAGAAT+TGG | + | chr5.2:70234144-70234163 | MS.gene29619:intron | 30.0% | |
| AGTTATGAGTGCTTATGAAA+AGG | - | chr5.2:70239077-70239096 | None:intergenic | 30.0% | |
| ATAAATCGGATTGCAAATTG+GGG | - | chr5.2:70236461-70236480 | None:intergenic | 30.0% | |
| ATGCTTAATTGCAACTGAAA+AGG | - | chr5.2:70235210-70235229 | None:intergenic | 30.0% | |
| ATTCTACGATAACAAAGTCT+TGG | + | chr5.2:70234026-70234045 | MS.gene29619:intron | 30.0% | |
| CAAAACTTTGATACCTCTAT+TGG | - | chr5.2:70233976-70233995 | None:intergenic | 30.0% | |
| CAAGGGTTTCATCTATAAAT+GGG | - | chr5.2:70239581-70239600 | None:intergenic | 30.0% | |
| CAAGTGAATGAAACCAAATT+TGG | - | chr5.2:70238300-70238319 | None:intergenic | 30.0% | |
| CAATAAATCGGATTGCAAAT+TGG | - | chr5.2:70236463-70236482 | None:intergenic | 30.0% | |
| CATAACTGTAAATGTCCAAT+TGG | + | chr5.2:70239090-70239109 | MS.gene29619:intron | 30.0% | |
| CATACTCTATTATCTCTTAG+GGG | + | chr5.2:70236516-70236535 | MS.gene29619:intron | 30.0% | |
| CTAACTTAAGTCTATTTCAC+AGG | + | chr5.2:70239341-70239360 | MS.gene29619:intron | 30.0% | |
| CTTGTGATCAAAACAGAATA+CGG | + | chr5.2:70235645-70235664 | MS.gene29619:intron | 30.0% | |
| CTTGTTACTGCACTTATTAT+CGG | + | chr5.2:70236906-70236925 | MS.gene29619:CDS | 30.0% | |
| CTTTATGAACATCAAAAGCT+TGG | + | chr5.2:70238430-70238449 | MS.gene29619:intron | 30.0% | |
| GAAAAATGGTGGCTAAAATA+TGG | - | chr5.2:70238873-70238892 | None:intergenic | 30.0% | |
| GATAATAAGTGCAGTAACAA+GGG | - | chr5.2:70236907-70236926 | None:intergenic | 30.0% | |
| GTTAGGAAATGGTAACATAA+TGG | + | chr5.2:70234254-70234273 | MS.gene29619:intron | 30.0% | |
| GTTTCATCTATAAATGGGAA+AGG | - | chr5.2:70239576-70239595 | None:intergenic | 30.0% | |
| TAATGATGTAGCTTTCTACT+GGG | + | chr5.2:70239419-70239438 | MS.gene29619:CDS | 30.0% | |
| TACAAATCAAAATGATGTGC+AGG | + | chr5.2:70233333-70233352 | MS.gene29619:CDS | 30.0% | |
| TAGAAGGGAAAACTTTGTTA+AGG | + | chr5.2:70234484-70234503 | MS.gene29619:intron | 30.0% | |
| TATTAAATGTGATGACTGAG+TGG | - | chr5.2:70238057-70238076 | None:intergenic | 30.0% | |
| TCACATTGATATGTAGAAGA+AGG | + | chr5.2:70233535-70233554 | MS.gene29619:intron | 30.0% | |
| TCCTAACAAATACCATGTTT+GGG | + | chr5.2:70236634-70236653 | MS.gene29619:intron | 30.0% | |
| TGAGATGATGAATATTTGGT+TGG | + | chr5.2:70235024-70235043 | MS.gene29619:intron | 30.0% | |
| TGATTTATTCCTATGAAAGG+TGG | - | chr5.2:70236746-70236765 | None:intergenic | 30.0% | |
| TGCTTAATTGCAACTGAAAA+GGG | - | chr5.2:70235209-70235228 | None:intergenic | 30.0% | |
| TTAATGATGTAGCTTTCTAC+TGG | + | chr5.2:70239418-70239437 | MS.gene29619:CDS | 30.0% | |
| TTAATGTTGTGTGTCTAAAG+AGG | - | chr5.2:70238228-70238247 | None:intergenic | 30.0% | |
| TTGTTACTGCACTTATTATC+GGG | + | chr5.2:70236907-70236926 | MS.gene29619:CDS | 30.0% | |
| TTTAAGCTTGCATTCATTTG+TGG | + | chr5.2:70237645-70237664 | MS.gene29619:intron | 30.0% | |
| TTTGTATGGTAACACAACTT+GGG | + | chr5.2:70233799-70233818 | MS.gene29619:intron | 30.0% | |
| ! | AAAAGTGAAACATGATTTGC+CGG | + | chr5.2:70238094-70238113 | MS.gene29619:intron | 30.0% |
| ! | AACAAAGACATGGACTAATT+AGG | - | chr5.2:70235365-70235384 | None:intergenic | 30.0% |
| ! | ACAAAGACATGGACTAATTA+GGG | - | chr5.2:70235364-70235383 | None:intergenic | 30.0% |
| ! | ACAATGATCCACAATTTTGA+AGG | - | chr5.2:70236312-70236331 | None:intergenic | 30.0% |
| ! | AGAATTTCTTTTGCCATATG+GGG | + | chr5.2:70237894-70237913 | MS.gene29619:CDS | 30.0% |
| ! | AGCCAAACACTTGATTTTTA+AGG | - | chr5.2:70235874-70235893 | None:intergenic | 30.0% |
| ! | CAAGCTTTTGATGTTCATAA+AGG | - | chr5.2:70238432-70238451 | None:intergenic | 30.0% |
| ! | CATATCATAGATGCATTTTG+AGG | + | chr5.2:70236803-70236822 | MS.gene29619:intron | 30.0% |
| ! | CTATGGTTCTATATAGTCTA+TGG | - | chr5.2:70238750-70238769 | None:intergenic | 30.0% |
| ! | CTTTGAATCGGATTCTAAAA+TGG | - | chr5.2:70238346-70238365 | None:intergenic | 30.0% |
| ! | GAGAAAGAAGCACATAAAAA+TGG | + | chr5.2:70233223-70233242 | MS.gene29619:CDS | 30.0% |
| ! | GAGAATTTCTTTTGCCATAT+GGG | + | chr5.2:70237893-70237912 | MS.gene29619:CDS | 30.0% |
| ! | GTTCAAAATTTTCAATGGTG+TGG | + | chr5.2:70234746-70234765 | MS.gene29619:intron | 30.0% |
| ! | GTTCAGAAGTTATTTCAACA+TGG | - | chr5.2:70236142-70236161 | None:intergenic | 30.0% |
| ! | TCAGTTATTTCATCTGATAG+AGG | - | chr5.2:70239483-70239502 | None:intergenic | 30.0% |
| ! | TTTTCTGACGAAAAGAAGAT+TGG | + | chr5.2:70234544-70234563 | MS.gene29619:intron | 30.0% |
| ! | TTTTGAACTTCTTCCAAAGA+TGG | - | chr5.2:70234734-70234753 | None:intergenic | 30.0% |
| !! | GTTTTAGCAAGATTGTTTCT+TGG | + | chr5.2:70237756-70237775 | MS.gene29619:intron | 30.0% |
| !!! | AAGGATTTCGATTTTTTCCT+TGG | - | chr5.2:70235855-70235874 | None:intergenic | 30.0% |
| !!! | AGGATTTCGATTTTTTCCTT+GGG | - | chr5.2:70235854-70235873 | None:intergenic | 30.0% |
| !!! | CAATAGAGGTATCAAAGTTT+TGG | + | chr5.2:70233974-70233993 | MS.gene29619:intron | 30.0% |
| !!! | TGGTATTGGTCAATTTGTTT+TGG | + | chr5.2:70237305-70237324 | MS.gene29619:intron | 30.0% |
| !!! | TTGGAAATTTTAATTGAGGG+TGG | + | chr5.2:70234563-70234582 | MS.gene29619:intron | 30.0% |
| AAAAATCAGGTCCTGTTTCA+AGG | - | chr5.2:70235405-70235424 | None:intergenic | 35.0% | |
| AAAACAAGAGTGAGAGACAA+AGG | - | chr5.2:70238979-70238998 | None:intergenic | 35.0% | |
| AAACAAGAGTGAGAGACAAA+GGG | - | chr5.2:70238978-70238997 | None:intergenic | 35.0% | |
| AACACTCATTAATCTGGCTA+TGG | - | chr5.2:70238767-70238786 | None:intergenic | 35.0% | |
| AACTGTAAATGTCCAATTGG+AGG | + | chr5.2:70239093-70239112 | MS.gene29619:intron | 35.0% | |
| AATATAATCACCTTCACACC+TGG | - | chr5.2:70235703-70235722 | None:intergenic | 35.0% | |
| AATTCTGTTCCACCTTTCAT+AGG | + | chr5.2:70236734-70236753 | MS.gene29619:intron | 35.0% | |
| ACCCAAACATGGTATTTGTT+AGG | - | chr5.2:70236638-70236657 | None:intergenic | 35.0% | |
| AGTAGGGTATACGAATCTTT+GGG | + | chr5.2:70234946-70234965 | MS.gene29619:intron | 35.0% | |
| AGTATAGATACTTTCGCTGT+AGG | - | chr5.2:70233725-70233744 | None:intergenic | 35.0% | |
| AGTTGCTCATAACCTTGTTA+GGG | - | chr5.2:70238194-70238213 | None:intergenic | 35.0% | |
| ATACACATTTGCCAAGATTG+AGG | + | chr5.2:70234187-70234206 | MS.gene29619:intron | 35.0% | |
| ATCTCAAATGGAACAACCAT+TGG | - | chr5.2:70237974-70237993 | None:intergenic | 35.0% | |
| ATCTTGGCAAATGTGTATTG+GGG | - | chr5.2:70234185-70234204 | None:intergenic | 35.0% | |
| ATTACATCATCCAGTTGTTG+AGG | - | chr5.2:70235824-70235843 | None:intergenic | 35.0% | |
| ATTCCTTGTAACTCTTGAGT+AGG | + | chr5.2:70234929-70234948 | MS.gene29619:intron | 35.0% | |
| CAATCTTGGCAAATGTGTAT+TGG | - | chr5.2:70234187-70234206 | None:intergenic | 35.0% | |
| CATTTAATCCAAACAGCTCT+CGG | + | chr5.2:70238557-70238576 | MS.gene29619:intron | 35.0% | |
| CGATAATAAGTGCAGTAACA+AGG | - | chr5.2:70236908-70236927 | None:intergenic | 35.0% | |
| CTCGAGAGGATAAAAGAATT+TGG | - | chr5.2:70239126-70239145 | None:intergenic | 35.0% | |
| CTGATATTCTTCTTGCAAAG+AGG | + | chr5.2:70239447-70239466 | MS.gene29619:CDS | 35.0% | |
| CTTAATTGCAACTGAAAAGG+GGG | - | chr5.2:70235207-70235226 | None:intergenic | 35.0% | |
| CTTTACAGCCAATGAATAAG+TGG | - | chr5.2:70234794-70234813 | None:intergenic | 35.0% | |
| GAGTATGAAGTGACAAGAAA+AGG | - | chr5.2:70236503-70236522 | None:intergenic | 35.0% | |
| GAGTCAAGAAACCAAGTATA+TGG | + | chr5.2:70233691-70233710 | MS.gene29619:intron | 35.0% | |
| GATCCTATTCGTATGTCTTT+CGG | - | chr5.2:70238133-70238152 | None:intergenic | 35.0% | |
| GCAAGGGTTTCATCTATAAA+TGG | - | chr5.2:70239582-70239601 | None:intergenic | 35.0% | |
| GCAAGGTGTATAGTACATAA+GGG | + | chr5.2:70234422-70234441 | MS.gene29619:intron | 35.0% | |
| GCTTAATTGCAACTGAAAAG+GGG | - | chr5.2:70235208-70235227 | None:intergenic | 35.0% | |
| GTCCTAACAAATACCATGTT+TGG | + | chr5.2:70236633-70236652 | MS.gene29619:intron | 35.0% | |
| GTTTGTATGGTAACACAACT+TGG | + | chr5.2:70233798-70233817 | MS.gene29619:intron | 35.0% | |
| TAAAGACTAATGGCGTGTTT+GGG | + | chr5.2:70234223-70234242 | MS.gene29619:intron | 35.0% | |
| TAGGACAACTTAAGGAAAAG+AGG | + | chr5.2:70238898-70238917 | MS.gene29619:intron | 35.0% | |
| TCACATGACCCTTTATATAG+TGG | - | chr5.2:70234828-70234847 | None:intergenic | 35.0% | |
| TCACTTGAGTAGAAGTTTGA+TGG | + | chr5.2:70234385-70234404 | MS.gene29619:intron | 35.0% | |
| TCATCTGATAGAGGAGAAAT+TGG | - | chr5.2:70239474-70239493 | None:intergenic | 35.0% | |
| TCTATAAATGGGAAAGGGTA+TGG | - | chr5.2:70239570-70239589 | None:intergenic | 35.0% | |
| TCTGCTCTACAATTTCTTTG+TGG | + | chr5.2:70233931-70233950 | MS.gene29619:intron | 35.0% | |
| TCTGGTTGTAAAGTAGTTCT+TGG | - | chr5.2:70236267-70236286 | None:intergenic | 35.0% | |
| TGACAACTCTCAAACAAATG+TGG | + | chr5.2:70234100-70234119 | MS.gene29619:intron | 35.0% | |
| TGCAAGGTGTATAGTACATA+AGG | + | chr5.2:70234421-70234440 | MS.gene29619:intron | 35.0% | |
| TGGTTTCATTCACTTGAGTA+TGG | + | chr5.2:70238304-70238323 | MS.gene29619:intron | 35.0% | |
| TGTTAAACCAGAATTGGTGA+TGG | + | chr5.2:70234150-70234169 | MS.gene29619:intron | 35.0% | |
| TGTTACTGCACTTATTATCG+GGG | + | chr5.2:70236908-70236927 | MS.gene29619:CDS | 35.0% | |
| TTCCTTGTAACTCTTGAGTA+GGG | + | chr5.2:70234930-70234949 | MS.gene29619:intron | 35.0% | |
| TTCTGATACTCATCCATCTT+TGG | + | chr5.2:70234718-70234737 | MS.gene29619:intron | 35.0% | |
| TTGATCTTGACTCTTAGGTT+TGG | + | chr5.2:70237948-70237967 | MS.gene29619:intron | 35.0% | |
| TTGTATGGTAACACAACTTG+GGG | + | chr5.2:70233800-70233819 | MS.gene29619:intron | 35.0% | |
| TTTCGGTCCAAAAAAGAAAC+CGG | - | chr5.2:70238116-70238135 | None:intergenic | 35.0% | |
| ! | AAGCTTAACTCCAAGGTTTT+GGG | - | chr5.2:70236961-70236980 | None:intergenic | 35.0% |
| ! | ACCACATGACAATGTTTTGT+AGG | - | chr5.2:70236553-70236572 | None:intergenic | 35.0% |
| ! | CCACATGACAATGTTTTGTA+GGG | - | chr5.2:70236552-70236571 | None:intergenic | 35.0% |
| ! | GGAATAACAGTTTTGCTCTT+AGG | + | chr5.2:70239528-70239547 | MS.gene29619:CDS | 35.0% |
| ! | GGAGAATTTCTTTTGCCATA+TGG | + | chr5.2:70237892-70237911 | MS.gene29619:CDS | 35.0% |
| ! | GTTAAACCAGAATTGGTGAT+GGG | + | chr5.2:70234151-70234170 | MS.gene29619:intron | 35.0% |
| ! | TGGTTCTATATAGTCTATGG+CGG | - | chr5.2:70238747-70238766 | None:intergenic | 35.0% |
| ! | TTTGTTATACCTCCAAGTGA+CGG | + | chr5.2:70237520-70237539 | MS.gene29619:CDS | 35.0% |
| !! | AAACACGCCATTAGTCTTTA+CGG | - | chr5.2:70234223-70234242 | None:intergenic | 35.0% |
| !! | ACAAGAGGGTTGATAGAAAT+TGG | - | chr5.2:70237804-70237823 | None:intergenic | 35.0% |
| !! | GACATGTACGATTTTGGTAT+TGG | + | chr5.2:70237291-70237310 | MS.gene29619:intron | 35.0% |
| !! | GGTAACATAATGGATGTTGA+AGG | + | chr5.2:70234264-70234283 | MS.gene29619:intron | 35.0% |
| !! | TGAATCGGATTCTAAAATGG+TGG | - | chr5.2:70238343-70238362 | None:intergenic | 35.0% |
| !! | TTTGGTGACATGTACGATTT+TGG | + | chr5.2:70237285-70237304 | MS.gene29619:intron | 35.0% |
| !!! | AAAACCTTATTTTTCGCTGC+AGG | - | chr5.2:70238798-70238817 | None:intergenic | 35.0% |
| !!! | ATTTCTTTTCACTCTGGAGT+TGG | + | chr5.2:70233767-70233786 | MS.gene29619:intron | 35.0% |
| !!! | GCTCTTTTGGTTCAATTACA+AGG | + | chr5.2:70237398-70237417 | MS.gene29619:CDS | 35.0% |
| !!! | TGATTTGCCGGTTTCTTTTT+TGG | + | chr5.2:70238106-70238125 | MS.gene29619:intron | 35.0% |
| !!! | TTTCTTTTCACTCTGGAGTT+GGG | + | chr5.2:70233768-70233787 | MS.gene29619:intron | 35.0% |
| AAAGACTAATGGCGTGTTTG+GGG | + | chr5.2:70234224-70234243 | MS.gene29619:intron | 40.0% | |
| AACAAGACCCAATGCAAATC+CGG | - | chr5.2:70237485-70237504 | None:intergenic | 40.0% | |
| AACAAGAGTGAGAGACAAAG+GGG | - | chr5.2:70238977-70238996 | None:intergenic | 40.0% | |
| AAGGTTATGAGCAACTCCAT+TGG | + | chr5.2:70238198-70238217 | MS.gene29619:intron | 40.0% | |
| AAGTAAGTACGAGTTGTCTC+TGG | - | chr5.2:70236285-70236304 | None:intergenic | 40.0% | |
| AATCAAGCAAGGAGAACACT+TGG | - | chr5.2:70238924-70238943 | None:intergenic | 40.0% | |
| ACAACCCGCCACTATATAAA+GGG | + | chr5.2:70234817-70234836 | MS.gene29619:intron | 40.0% | |
| AGAGCAACATACTTGTCATC+AGG | - | chr5.2:70239507-70239526 | None:intergenic | 40.0% | |
| AGGCTGTTAGGGACATATAA+AGG | - | chr5.2:70235804-70235823 | None:intergenic | 40.0% | |
| AGGTTATGAGCAACTCCATT+GGG | + | chr5.2:70238199-70238218 | MS.gene29619:intron | 40.0% | |
| AGTAGTTCTTGGAACGACAA+CGG | - | chr5.2:70236256-70236275 | None:intergenic | 40.0% | |
| ATAGATACTTTCGCTGTAGG+TGG | - | chr5.2:70233722-70233741 | None:intergenic | 40.0% | |
| ATGACCCTTTATATAGTGGC+GGG | - | chr5.2:70234824-70234843 | None:intergenic | 40.0% | |
| ATTATCGGGGTACATGAACT+TGG | + | chr5.2:70236921-70236940 | MS.gene29619:CDS | 40.0% | |
| ATTTGGTTGGACTGTTTCCA+TGG | + | chr5.2:70235037-70235056 | MS.gene29619:intron | 40.0% | |
| CAAAACCTTGGAGTTAAGCT+TGG | + | chr5.2:70236960-70236979 | MS.gene29619:CDS | 40.0% | |
| CAAACCTGCAGCGAAAAATA+AGG | + | chr5.2:70238791-70238810 | MS.gene29619:intron | 40.0% | |
| CAGATTGTCAACAGTTGATC+TGG | - | chr5.2:70236856-70236875 | None:intergenic | 40.0% | |
| CATACAACCTGTCTTTACTC+TGG | + | chr5.2:70236764-70236783 | MS.gene29619:intron | 40.0% | |
| CATGACCCTTTATATAGTGG+CGG | - | chr5.2:70234825-70234844 | None:intergenic | 40.0% | |
| CATGCAGGTACATAATCAAG+AGG | - | chr5.2:70239198-70239217 | None:intergenic | 40.0% | |
| CCCTACAAAACATTGTCATG+TGG | + | chr5.2:70236549-70236568 | MS.gene29619:intron | 40.0% | |
| CTCAATGTGAAACTGAAACC+AGG | - | chr5.2:70235301-70235320 | None:intergenic | 40.0% | |
| CTGGTTTCAGTTTCACATTG+AGG | + | chr5.2:70235299-70235318 | MS.gene29619:intron | 40.0% | |
| GAGTAGGGTATACGAATCTT+TGG | + | chr5.2:70234945-70234964 | MS.gene29619:intron | 40.0% | |
| GAGTTGCTCATAACCTTGTT+AGG | - | chr5.2:70238195-70238214 | None:intergenic | 40.0% | |
| GATAACATAGAAGTTGCCAG+TGG | + | chr5.2:70235667-70235686 | MS.gene29619:CDS | 40.0% | |
| GATGACAAGTATGTTGCTCT+CGG | + | chr5.2:70239507-70239526 | MS.gene29619:CDS | 40.0% | |
| GCAGCTATTTATTGTGTCCA+TGG | - | chr5.2:70233893-70233912 | None:intergenic | 40.0% | |
| GTAAAGACTAATGGCGTGTT+TGG | + | chr5.2:70234222-70234241 | MS.gene29619:intron | 40.0% | |
| GTAGGGTATACGAATCTTTG+GGG | + | chr5.2:70234947-70234966 | MS.gene29619:intron | 40.0% | |
| GTCCACTTCTTCATTGTTGA+AGG | + | chr5.2:70233607-70233626 | MS.gene29619:intron | 40.0% | |
| GTCCTTCAACAATGAAGAAG+TGG | - | chr5.2:70233612-70233631 | None:intergenic | 40.0% | |
| GTGTATAGTACATAAGGGCT+TGG | + | chr5.2:70234427-70234446 | MS.gene29619:intron | 40.0% | |
| GTGTCGAATATCCTCAATCT+TGG | - | chr5.2:70234201-70234220 | None:intergenic | 40.0% | |
| GTTCATAAAGGTGAAGCCTT+GGG | - | chr5.2:70238420-70238439 | None:intergenic | 40.0% | |
| GTTGTCCTAGAAGCGAAAAA+TGG | - | chr5.2:70238887-70238906 | None:intergenic | 40.0% | |
| TAAGAAACTAGCAACTCGAG+AGG | - | chr5.2:70239140-70239159 | None:intergenic | 40.0% | |
| TACACCTTGCAAACCTACTT+TGG | - | chr5.2:70234412-70234431 | None:intergenic | 40.0% | |
| TACCCTACTCAAGAGTTACA+AGG | - | chr5.2:70234935-70234954 | None:intergenic | 40.0% | |
| TAGGTCTTGGTATATGCATC+TGG | - | chr5.2:70238499-70238518 | None:intergenic | 40.0% | |
| TAGTCAACCAGAGTAAAGAC+AGG | - | chr5.2:70236774-70236793 | None:intergenic | 40.0% | |
| TATCAACCCTCTTGTGATCT+GGG | + | chr5.2:70237809-70237828 | MS.gene29619:CDS | 40.0% | |
| TATTCAAAGGAAACCTGCGA+GGG | + | chr5.2:70236027-70236046 | MS.gene29619:CDS | 40.0% | |
| TGAGTGTCCTTATGTCTGTA+CGG | - | chr5.2:70238953-70238972 | None:intergenic | 40.0% | |
| TGGAGAAACACAATCTTTGG+AGG | + | chr5.2:70233243-70233262 | MS.gene29619:CDS | 40.0% | |
| TGTAAATGTCCAATTGGAGG+AGG | + | chr5.2:70239096-70239115 | MS.gene29619:intron | 40.0% | |
| TGTTCATAAAGGTGAAGCCT+TGG | - | chr5.2:70238421-70238440 | None:intergenic | 40.0% | |
| TTCGACACCGTAAAGACTAA+TGG | + | chr5.2:70234213-70234232 | MS.gene29619:intron | 40.0% | |
| TTGCTTGATGAAAATGCTCC+TGG | + | chr5.2:70235280-70235299 | MS.gene29619:intron | 40.0% | |
| TTTAGCTGTTCTGCATCTAC+AGG | - | chr5.2:70233295-70233314 | None:intergenic | 40.0% | |
| TTTCCTTCTAGTCAATCCTG+AGG | + | chr5.2:70236215-70236234 | MS.gene29619:CDS | 40.0% | |
| ! | AAGGTGCCACCAAGATTTAA+AGG | - | chr5.2:70239039-70239058 | None:intergenic | 40.0% |
| ! | AGCTGTATTGCTGTCAGTTT+TGG | + | chr5.2:70238828-70238847 | MS.gene29619:intron | 40.0% |
| ! | ATATGCATCTGGAATGAGCA+TGG | - | chr5.2:70238488-70238507 | None:intergenic | 40.0% |
| ! | ATATGGCTTGCAGAATACCT+CGG | - | chr5.2:70238856-70238875 | None:intergenic | 40.0% |
| ! | CAAGCTTAACTCCAAGGTTT+TGG | - | chr5.2:70236962-70236981 | None:intergenic | 40.0% |
| ! | GAAGTTTGATGGTCCAAAGT+AGG | + | chr5.2:70234396-70234415 | MS.gene29619:intron | 40.0% |
| ! | TGCTTAATTTGGTGGCAGAT+AGG | + | chr5.2:70237376-70237395 | MS.gene29619:intron | 40.0% |
| ! | TTGGTGGCACCTTTAAATCT+TGG | + | chr5.2:70239046-70239065 | MS.gene29619:intron | 40.0% |
| ! | TTTTGCCATATGGGGAAGAA+AGG | + | chr5.2:70237902-70237921 | MS.gene29619:CDS | 40.0% |
| !! | AGGTCTTGTTGCATGAAGAT+TGG | + | chr5.2:70235975-70235994 | MS.gene29619:intron | 40.0% |
| !! | AGTTTGTTGGAGTGTTTCCA+TGG | + | chr5.2:70233873-70233892 | MS.gene29619:intron | 40.0% |
| !! | ATCGGATTCTAAAATGGTGG+TGG | - | chr5.2:70238340-70238359 | None:intergenic | 40.0% |
| !! | CCAAAAGCGCTATTGCTTAT+GGG | + | chr5.2:70233463-70233482 | MS.gene29619:intron | 40.0% |
| !! | GATTCTAAAATGGTGGTGGA+TGG | - | chr5.2:70238336-70238355 | None:intergenic | 40.0% |
| !! | GGATTTTCGATTGTGTTGCT+TGG | + | chr5.2:70239381-70239400 | MS.gene29619:CDS | 40.0% |
| !! | GGGGATTTCAAGTTAGGAAA+TGG | + | chr5.2:70234243-70234262 | MS.gene29619:intron | 40.0% |
| !! | GGTCTTGTTGCATGAAGATT+GGG | + | chr5.2:70235976-70235995 | MS.gene29619:intron | 40.0% |
| !! | GTGTTTGGGGATTTCAAGTT+AGG | + | chr5.2:70234237-70234256 | MS.gene29619:intron | 40.0% |
| !! | GTTTCTTGGTAACGTTCTCA+AGG | + | chr5.2:70237770-70237789 | MS.gene29619:CDS | 40.0% |
| !! | TACTGTTGATGGCATTGATG+AGG | - | chr5.2:70237848-70237867 | None:intergenic | 40.0% |
| !! | TCCAAAAGCGCTATTGCTTA+TGG | + | chr5.2:70233462-70233481 | MS.gene29619:intron | 40.0% |
| !! | TTCGCTTCTAGGACAACTTA+AGG | + | chr5.2:70238890-70238909 | MS.gene29619:intron | 40.0% |
| !! | TTTCACGAGTCATTTCTAGC+TGG | + | chr5.2:70237571-70237590 | MS.gene29619:CDS | 40.0% |
| !! | TTTCTAGTTGCCCAAAACCT+TGG | + | chr5.2:70236948-70236967 | MS.gene29619:CDS | 40.0% |
| !!! | CTTTTTTAGCTGTACCTGAG+TGG | + | chr5.2:70236379-70236398 | MS.gene29619:intron | 40.0% |
| AACAAGCCAAGATCCTTACG+AGG | + | chr5.2:70235910-70235929 | MS.gene29619:CDS | 45.0% | |
| ACAACACCAATACCGTCACT+TGG | - | chr5.2:70237535-70237554 | None:intergenic | 45.0% | |
| ACATATGAACTGCAGCATCG+TGG | - | chr5.2:70234314-70234333 | None:intergenic | 45.0% | |
| ACCAATTGCCGGATTTGCAT+TGG | + | chr5.2:70237474-70237493 | MS.gene29619:CDS | 45.0% | |
| AGCAAACGGCTGCTGTAATT+TGG | - | chr5.2:70238589-70238608 | None:intergenic | 45.0% | |
| AGGGAGAATGCCTCTAACAT+AGG | - | chr5.2:70235741-70235760 | None:intergenic | 45.0% | |
| AGGTGGATCACCCATATACT+TGG | - | chr5.2:70233705-70233724 | None:intergenic | 45.0% | |
| ATACCTCCAAGTGACGGTAT+TGG | + | chr5.2:70237526-70237545 | MS.gene29619:CDS | 45.0% | |
| ATCCAGTTGTTGAGGCTGTT+AGG | - | chr5.2:70235816-70235835 | None:intergenic | 45.0% | |
| ATTCCCGCTGGAGAAATTGA+TGG | + | chr5.2:70237867-70237886 | MS.gene29619:CDS | 45.0% | |
| CACAACCCGCCACTATATAA+AGG | + | chr5.2:70234816-70234835 | MS.gene29619:intron | 45.0% | |
| CATCCTCAGGATTGACTAGA+AGG | - | chr5.2:70236221-70236240 | None:intergenic | 45.0% | |
| CCAATTGCCGGATTTGCATT+GGG | + | chr5.2:70237475-70237494 | MS.gene29619:CDS | 45.0% | |
| CGATACCTTTCTTCCCCATA+TGG | - | chr5.2:70237910-70237929 | None:intergenic | 45.0% | |
| CTATCAACCCTCTTGTGATC+TGG | + | chr5.2:70237808-70237827 | MS.gene29619:CDS | 45.0% | |
| CTATTCAAAGGAAACCTGCG+AGG | + | chr5.2:70236026-70236045 | MS.gene29619:CDS | 45.0% | |
| GAGAAATGAGCATGTGTGAG+CGG | + | chr5.2:70234867-70234886 | MS.gene29619:intron | 45.0% | |
| GGACCGAAAGACATACGAAT+AGG | + | chr5.2:70238127-70238146 | MS.gene29619:intron | 45.0% | |
| GGAGTCGAATGCTATGCTTT+GGG | - | chr5.2:70238726-70238745 | None:intergenic | 45.0% | |
| GGTGACAGTAGATTTGACAC+AGG | - | chr5.2:70238617-70238636 | None:intergenic | 45.0% | |
| GTAGAACCCATCACCAATTC+TGG | - | chr5.2:70234160-70234179 | None:intergenic | 45.0% | |
| GTCCTAGAAGCGAAAAATGG+TGG | - | chr5.2:70238884-70238903 | None:intergenic | 45.0% | |
| GTCTTTGGCATGCAATGATC+TGG | - | chr5.2:70238398-70238417 | None:intergenic | 45.0% | |
| GTGGCACCTTTAAATCTTGG+TGG | + | chr5.2:70239049-70239068 | MS.gene29619:intron | 45.0% | |
| GTTGGGCACTCAAGTTTGTA+TGG | + | chr5.2:70233785-70233804 | MS.gene29619:intron | 45.0% | |
| TACGGTTTGCGAATCAAGCA+AGG | - | chr5.2:70238935-70238954 | None:intergenic | 45.0% | |
| TATCATACAACCTGCCAGCT+AGG | - | chr5.2:70237002-70237021 | None:intergenic | 45.0% | |
| TATGGTAACACAACTTGGGG+TGG | + | chr5.2:70233803-70233822 | MS.gene29619:intron | 45.0% | |
| TCCACCCTAGCAGAAAAATC+AGG | - | chr5.2:70236003-70236022 | None:intergenic | 45.0% | |
| TCCAGTTGTTGAGGCTGTTA+GGG | - | chr5.2:70235815-70235834 | None:intergenic | 45.0% | |
| TCGCAAACCGTACAGACATA+AGG | + | chr5.2:70238943-70238962 | MS.gene29619:intron | 45.0% | |
| TCTCTCCAAAGAGACGATGT+TGG | - | chr5.2:70234360-70234379 | None:intergenic | 45.0% | |
| TGACTCTTAGGTTTGGCCAA+TGG | + | chr5.2:70237955-70237974 | MS.gene29619:intron | 45.0% | |
| TGATGCCAACATCGTCTCTT+TGG | + | chr5.2:70234352-70234371 | MS.gene29619:intron | 45.0% | |
| TGCCAGCTAGGAACAAAGTA+CGG | - | chr5.2:70236990-70237009 | None:intergenic | 45.0% | |
| TGCTCATAACCTTGTTAGGG+CGG | - | chr5.2:70238191-70238210 | None:intergenic | 45.0% | |
| TGGTCCAAAGTAGGTTTGCA+AGG | + | chr5.2:70234405-70234424 | MS.gene29619:intron | 45.0% | |
| TGTCTAAAGAGGCAACCCAA+TGG | - | chr5.2:70238217-70238236 | None:intergenic | 45.0% | |
| TGTGTGAGCGGTCATGTATT+AGG | + | chr5.2:70234879-70234898 | MS.gene29619:intron | 45.0% | |
| TTAGCTGTACCTGAGTGGTT+TGG | + | chr5.2:70236384-70236403 | MS.gene29619:intron | 45.0% | |
| TTCATATGTCCCAGGATGCA+AGG | + | chr5.2:70234325-70234344 | MS.gene29619:intron | 45.0% | |
| TTGCGTGTGTTTCCCAATAG+AGG | + | chr5.2:70233960-70233979 | MS.gene29619:intron | 45.0% | |
| TTGTTAAAGGATGGCCTACC+TGG | + | chr5.2:70236879-70236898 | MS.gene29619:CDS | 45.0% | |
| TTTGGAAAGCCTCCTCCAAT+TGG | - | chr5.2:70239108-70239127 | None:intergenic | 45.0% | |
| ! | ACACCCCACAACTCTAAAGA+AGG | + | chr5.2:70233630-70233649 | MS.gene29619:intron | 45.0% |
| ! | CACCCCACAACTCTAAAGAA+GGG | + | chr5.2:70233631-70233650 | MS.gene29619:intron | 45.0% |
| ! | CCCATAAGCAATAGCGCTTT+TGG | - | chr5.2:70233466-70233485 | None:intergenic | 45.0% |
| ! | GGGTCCTGATTTTTCTGCTA+GGG | + | chr5.2:70235996-70236015 | MS.gene29619:intron | 45.0% |
| ! | GTTGCGTTTTCTCAGTACAC+AGG | - | chr5.2:70238527-70238546 | None:intergenic | 45.0% |
| ! | TAGGGTGGAGTGCTATTCAA+AGG | + | chr5.2:70236014-70236033 | MS.gene29619:intron | 45.0% |
| ! | TCCTGATTTTTCTGCTAGGG+TGG | + | chr5.2:70235999-70236018 | MS.gene29619:intron | 45.0% |
| ! | TGGGTCCTGATTTTTCTGCT+AGG | + | chr5.2:70235995-70236014 | MS.gene29619:intron | 45.0% |
| !! | AGAGCCCTTCTTTAGAGTTG+TGG | - | chr5.2:70233638-70233657 | None:intergenic | 45.0% |
| !! | AGCCACCATTTTTCGCTTCT+AGG | + | chr5.2:70238879-70238898 | MS.gene29619:intron | 45.0% |
| !! | AGCCCTTCTTTAGAGTTGTG+GGG | - | chr5.2:70233636-70233655 | None:intergenic | 45.0% |
| !! | CTTGGTAACGTTCTCAAGGA+AGG | + | chr5.2:70237774-70237793 | MS.gene29619:CDS | 45.0% |
| !! | GAGCCCTTCTTTAGAGTTGT+GGG | - | chr5.2:70233637-70233656 | None:intergenic | 45.0% |
| !! | GGTCTTGTTCTTCTGCTTCT+AGG | + | chr5.2:70237496-70237515 | MS.gene29619:CDS | 45.0% |
| !! | TATGCTTTGGGAGTCCATTC+AGG | - | chr5.2:70238714-70238733 | None:intergenic | 45.0% |
| !! | TTTTAGAAGCTTTCCCTCGC+AGG | - | chr5.2:70236043-70236062 | None:intergenic | 45.0% |
| AAGGTGAAGCCTTGGGTCTT+TGG | - | chr5.2:70238413-70238432 | None:intergenic | 50.0% | |
| ACACCAATACCGTCACTTGG+AGG | - | chr5.2:70237532-70237551 | None:intergenic | 50.0% | |
| ACGGCTAGAACAACTGCACA+CGG | - | chr5.2:70238638-70238657 | None:intergenic | 50.0% | |
| AGACTTGGCAAGCTGGAACA+CGG | - | chr5.2:70238657-70238676 | None:intergenic | 50.0% | |
| AGATAGGCACACACCTCGTA+AGG | - | chr5.2:70235926-70235945 | None:intergenic | 50.0% | |
| AGCTGTTCTGCATCTACAGG+TGG | - | chr5.2:70233292-70233311 | None:intergenic | 50.0% | |
| CACACACCTCGTAAGGATCT+TGG | - | chr5.2:70235919-70235938 | None:intergenic | 50.0% | |
| CAGGCTTCAATTCGCTTCAC+AGG | + | chr5.2:70239360-70239379 | MS.gene29619:intron | 50.0% | |
| CATCAGCAACCTTGCATCCT+GGG | - | chr5.2:70234337-70234356 | None:intergenic | 50.0% | |
| CATTGCATGCCAAAGACCCA+AGG | + | chr5.2:70238401-70238420 | MS.gene29619:intron | 50.0% | |
| CCCAATGCAAATCCGGCAAT+TGG | - | chr5.2:70237478-70237497 | None:intergenic | 50.0% | |
| CCCTCCATCAATTTCTCCAG+CGG | - | chr5.2:70237874-70237893 | None:intergenic | 50.0% | |
| CCGCTGGAGAAATTGATGGA+GGG | + | chr5.2:70237871-70237890 | MS.gene29619:CDS | 50.0% | |
| CCTCCATCAATTTCTCCAGC+GGG | - | chr5.2:70237873-70237892 | None:intergenic | 50.0% | |
| CGGAGTCGAATGCTATGCTT+TGG | - | chr5.2:70238727-70238746 | None:intergenic | 50.0% | |
| GCCAGCTAGGAACAAAGTAC+GGG | - | chr5.2:70236989-70237008 | None:intergenic | 50.0% | |
| GGACTCCAAGCTTAACTCCA+AGG | - | chr5.2:70236968-70236987 | None:intergenic | 50.0% | |
| GTACTTTGTTCCTAGCTGGC+AGG | + | chr5.2:70236989-70237008 | MS.gene29619:CDS | 50.0% | |
| GTTCTGCATCTACAGGTGGA+GGG | - | chr5.2:70233288-70233307 | None:intergenic | 50.0% | |
| TCCAGCGGGAATACTGTTGA+TGG | - | chr5.2:70237859-70237878 | None:intergenic | 50.0% | |
| TCCCGTACTTTGTTCCTAGC+TGG | + | chr5.2:70236985-70237004 | MS.gene29619:CDS | 50.0% | |
| TCCCTAACAGCCTCAACAAC+TGG | + | chr5.2:70235811-70235830 | MS.gene29619:intron | 50.0% | |
| TCCTGAGGATGATAAGCCAG+TGG | + | chr5.2:70236230-70236249 | MS.gene29619:CDS | 50.0% | |
| TGACACAGGCAGACAGCAAA+CGG | - | chr5.2:70238603-70238622 | None:intergenic | 50.0% | |
| TGCTGCAGTTCATATGTCCC+AGG | + | chr5.2:70234317-70234336 | MS.gene29619:intron | 50.0% | |
| TGGACTGTTTCCATGGACGT+GGG | + | chr5.2:70235044-70235063 | MS.gene29619:intron | 50.0% | |
| TGTTCTGCATCTACAGGTGG+AGG | - | chr5.2:70233289-70233308 | None:intergenic | 50.0% | |
| TTGCTCAAGATTGCAGCTGC+TGG | + | chr5.2:70237451-70237470 | MS.gene29619:CDS | 50.0% | |
| TTGGACTGTTTCCATGGACG+TGG | + | chr5.2:70235043-70235062 | MS.gene29619:intron | 50.0% | |
| ! | GACACTTTTACCCACGTCCA+TGG | - | chr5.2:70235057-70235076 | None:intergenic | 50.0% |
| ! | GCGTTTTCTCAGTACACAGG+AGG | - | chr5.2:70238524-70238543 | None:intergenic | 50.0% |
| ! | GGAGAAGCCAGACCAGATTT+TGG | - | chr5.2:70238693-70238712 | None:intergenic | 50.0% |
| ! | GGGTATACGAATCTTTGGGG+TGG | + | chr5.2:70234950-70234969 | MS.gene29619:intron | 50.0% |
| ! | GGTGGTACACATAGTGGAGA+GGG | + | chr5.2:70234968-70234987 | MS.gene29619:intron | 50.0% |
| ! | TACACAGGAGGCATAGGTCT+TGG | - | chr5.2:70238512-70238531 | None:intergenic | 50.0% |
| ! | TCTCAGTACACAGGAGGCAT+AGG | - | chr5.2:70238518-70238537 | None:intergenic | 50.0% |
| ! | TGGAGGGTTACTTTGCTCAG+AGG | - | chr5.2:70233272-70233291 | None:intergenic | 50.0% |
| ! | TGGTGGCAGATAGGCTCTTT+TGG | + | chr5.2:70237385-70237404 | MS.gene29619:intron | 50.0% |
| !! | CACGAGTCATTTCTAGCTGG+CGG | + | chr5.2:70237574-70237593 | MS.gene29619:CDS | 50.0% |
| !! | CTTTGGGGTGGTACACATAG+TGG | + | chr5.2:70234962-70234981 | MS.gene29619:intron | 50.0% |
| !! | TCATTTCTAGCTGGCGGCAT+TGG | + | chr5.2:70237580-70237599 | MS.gene29619:CDS | 50.0% |
| !!! | TGCTGTCAGTTTTGGTTCCG+AGG | + | chr5.2:70238836-70238855 | MS.gene29619:intron | 50.0% |
| !!! | TGGTTTGGTGCTGCGTCTTT+TGG | + | chr5.2:70236399-70236418 | MS.gene29619:CDS | 50.0% |
| ACCCTCTTGTGATCTGGGCT+TGG | + | chr5.2:70237814-70237833 | MS.gene29619:CDS | 55.0% | |
| AGTGCAGTAACAAGGGCTCC+AGG | - | chr5.2:70236900-70236919 | None:intergenic | 55.0% | |
| ATCACCTCTGCCAGGTGTGA+AGG | + | chr5.2:70235690-70235709 | MS.gene29619:CDS | 55.0% | |
| ATCACCTTCACACCTGGCAG+AGG | - | chr5.2:70235697-70235716 | None:intergenic | 55.0% | |
| CAGTAACAAGGGCTCCAGGT+AGG | - | chr5.2:70236896-70236915 | None:intergenic | 55.0% | |
| CCAGCTTGCCAAGTCTGCTT+GGG | + | chr5.2:70238661-70238680 | MS.gene29619:intron | 55.0% | |
| CCCAAGCCCAGATCACAAGA+GGG | - | chr5.2:70237818-70237837 | None:intergenic | 55.0% | |
| CCCGCTGGAGAAATTGATGG+AGG | + | chr5.2:70237870-70237889 | MS.gene29619:CDS | 55.0% | |
| CCCTCTTGTGATCTGGGCTT+GGG | + | chr5.2:70237815-70237834 | MS.gene29619:CDS | 55.0% | |
| CTTGGGCTCGTGCCAAAATC+TGG | + | chr5.2:70238678-70238697 | MS.gene29619:intron | 55.0% | |
| GCATCAGCAACCTTGCATCC+TGG | - | chr5.2:70234338-70234357 | None:intergenic | 55.0% | |
| GCCATCAACAGTATTCCCGC+TGG | + | chr5.2:70237855-70237874 | MS.gene29619:CDS | 55.0% | |
| GCTCGTGCCAAAATCTGGTC+TGG | + | chr5.2:70238683-70238702 | MS.gene29619:intron | 55.0% | |
| GGGGACATTGCGAAGCAGTA+AGG | - | chr5.2:70236442-70236461 | None:intergenic | 55.0% | |
| TCCAGCTTGCCAAGTCTGCT+TGG | + | chr5.2:70238660-70238679 | MS.gene29619:intron | 55.0% | |
| ! | CTGGTCTGGCTTCTCCTGAA+TGG | + | chr5.2:70238697-70238716 | MS.gene29619:intron | 55.0% |
| ! | GGGTGGTACACATAGTGGAG+AGG | + | chr5.2:70234967-70234986 | MS.gene29619:intron | 55.0% |
| !! | GCCACTGGCTTATCATCCTC+AGG | - | chr5.2:70236234-70236253 | None:intergenic | 55.0% |
| ACCTGGCAGAGGTGATCCAC+TGG | - | chr5.2:70235686-70235705 | None:intergenic | 60.0% | |
| CCCAAGCAGACTTGGCAAGC+TGG | - | chr5.2:70238664-70238683 | None:intergenic | 60.0% | |
| CTTGGAACGACAACGGCCAC+TGG | - | chr5.2:70236249-70236268 | None:intergenic | 60.0% | |
| CTTGTGATCTGGGCTTGGGC+AGG | + | chr5.2:70237819-70237838 | MS.gene29619:CDS | 60.0% | |
| GACGCAGCACCAAACCACTC+AGG | - | chr5.2:70236396-70236415 | None:intergenic | 60.0% | |
| GCAGCTGCTGGACCAATTGC+CGG | + | chr5.2:70237463-70237482 | MS.gene29619:CDS | 60.0% | |
| GCCCAAGCCCAGATCACAAG+AGG | - | chr5.2:70237819-70237838 | None:intergenic | 60.0% | |
| GGCAGAAGCCGAGAGCTGTT+TGG | - | chr5.2:70238568-70238587 | None:intergenic | 60.0% | |
| GTGATGCAGCCGCCCTAACA+AGG | + | chr5.2:70238179-70238198 | MS.gene29619:intron | 60.0% | |
| GCCAGTGGATCACCTCTGCC+AGG | + | chr5.2:70235682-70235701 | MS.gene29619:CDS | 65.0% | |
| GGCACGAGCCCAAGCAGACT+TGG | - | chr5.2:70238672-70238691 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 70233146 | 70239611 | 70233146 | ID=MS.gene29619 |
| chr5.2 | mRNA | 70233146 | 70239611 | 70233146 | ID=MS.gene29619.t1;Parent=MS.gene29619 |
| chr5.2 | exon | 70233146 | 70233148 | 70233146 | ID=MS.gene29619.t1.exon1;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70233146 | 70233148 | 70233146 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70233223 | 70233354 | 70233223 | ID=MS.gene29619.t1.exon2;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70233223 | 70233354 | 70233223 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70235661 | 70235711 | 70235661 | ID=MS.gene29619.t1.exon3;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70235661 | 70235711 | 70235661 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70235821 | 70235931 | 70235821 | ID=MS.gene29619.t1.exon4;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70235821 | 70235931 | 70235821 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70236017 | 70236091 | 70236017 | ID=MS.gene29619.t1.exon5;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70236017 | 70236091 | 70236017 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70236189 | 70236294 | 70236189 | ID=MS.gene29619.t1.exon6;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70236189 | 70236294 | 70236189 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70236388 | 70236481 | 70236388 | ID=MS.gene29619.t1.exon7;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70236388 | 70236481 | 70236388 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70236857 | 70237010 | 70236857 | ID=MS.gene29619.t1.exon8;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70236857 | 70237010 | 70236857 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70237394 | 70237601 | 70237394 | ID=MS.gene29619.t1.exon9;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70237394 | 70237601 | 70237394 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70237763 | 70237923 | 70237763 | ID=MS.gene29619.t1.exon10;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70237763 | 70237923 | 70237763 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| chr5.2 | exon | 70239363 | 70239611 | 70239363 | ID=MS.gene29619.t1.exon11;Parent=MS.gene29619.t1 |
| chr5.2 | CDS | 70239363 | 70239611 | 70239363 | ID=cds.MS.gene29619.t1;Parent=MS.gene29619.t1 |
| Gene Sequence |
| Protein sequence |