Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30381.t1 | XP_003627273.1 | 99.5 | 208 | 1 | 0 | 1 | 208 | 1 | 208 | 3.80E-107 | 397.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30381.t1 | P94040 | 67.3 | 208 | 68 | 0 | 1 | 208 | 1 | 208 | 4.0e-73 | 275.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30381.t1 | G7L6U5 | 99.5 | 208 | 1 | 0 | 1 | 208 | 1 | 208 | 2.7e-107 | 397.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene30381 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene30381 | 0.815542 | 8.76E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene30381 | 0.828209 | 1.02E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene30381 | 0.824041 | 1.00E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene30381 | 0.850502 | 1.63E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene30381 | 0.858926 | 5.89E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene30381 | 0.823646 | 1.24E-53 | -1.69E-46 |
| MS.gene049615 | MS.gene30381 | 0.827559 | 1.46E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene30381 | 0.840125 | 1.05E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene30381 | 0.839641 | 1.40E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene30381 | 0.823158 | 1.61E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene30381 | 0.805078 | 1.59E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene30381 | 0.822031 | 2.94E-53 | -1.69E-46 |
| MS.gene050518 | MS.gene30381 | 0.819869 | 9.26E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene30381 | 0.801605 | 8.32E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene30381 | 0.809758 | 1.61E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene30381 | 0.803475 | 3.42E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene30381 | 0.833562 | 4.97E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene30381 | 0.801991 | 6.93E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene30381 | 0.830368 | 3.05E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene30381 | 0.832241 | 1.06E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene30381 | 0.860983 | 1.41E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene30381 | 0.851891 | 6.60E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene30381 | 0.826632 | 2.44E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene30381 | 0.854984 | 8.55E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene30381 | 0.804651 | 1.95E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene30381 | 0.820931 | 5.28E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene30381 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene30381 | 0.846703 | 1.84E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene30381 | 0.801593 | 8.37E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene30381 | 0.813096 | 3.04E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene30381 | 0.801665 | 8.09E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene30381 | 0.814935 | 1.20E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene30381 | 0.870217 | 1.72E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene30381 | 0.861827 | 7.80E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene30381 | 0.84579 | 3.26E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene30381 | 0.826504 | 2.62E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene30381 | 0.84837 | 6.40E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene30381 | 0.841583 | 4.35E-58 | -1.69E-46 |
| MS.gene054376 | MS.gene30381 | 0.815187 | 1.05E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene30381 | 0.875025 | 4.26E-68 | -1.69E-46 |
| MS.gene054802 | MS.gene30381 | 0.835317 | 1.80E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene30381 | 0.827254 | 1.73E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene30381 | 0.836702 | 8.02E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene30381 | 0.825049 | 5.79E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene30381 | 0.840869 | 6.71E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene30381 | 0.855008 | 8.41E-62 | -1.69E-46 |
| MS.gene055397 | MS.gene30381 | 0.85058 | 1.55E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene30381 | 0.838883 | 2.21E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene30381 | 0.821718 | 3.48E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene30381 | 0.801951 | 7.06E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene30381 | 0.804948 | 1.69E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene30381 | 0.814651 | 1.38E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene30381 | 0.854836 | 9.44E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene30381 | 0.802281 | 6.04E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene30381 | 0.810636 | 1.04E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene30381 | 0.863945 | 1.73E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene30381 | 0.864916 | 8.62E-65 | -1.69E-46 |
| MS.gene057129 | MS.gene30381 | 0.883467 | 4.38E-71 | -1.69E-46 |
| MS.gene057146 | MS.gene30381 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene057295 | MS.gene30381 | 0.800243 | 1.58E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene30381 | 0.813963 | 1.96E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene30381 | 0.85808 | 1.05E-62 | -1.69E-46 |
| MS.gene057926 | MS.gene30381 | 0.832704 | 8.12E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene30381 | 0.808641 | 2.80E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene30381 | 0.857792 | 1.28E-62 | -1.69E-46 |
| MS.gene058293 | MS.gene30381 | 0.819902 | 9.10E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene30381 | 0.812928 | 3.31E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene30381 | 0.873516 | 1.38E-67 | -1.69E-46 |
| MS.gene058544 | MS.gene30381 | 0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene30381 | 0.802024 | 6.83E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene30381 | 0.856421 | 3.25E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene30381 | 0.815948 | 7.12E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene30381 | 0.818374 | 2.03E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene30381 | 0.816034 | 6.81E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene30381 | 0.856927 | 2.31E-62 | -1.69E-46 |
| MS.gene059718 | MS.gene30381 | 0.835373 | 1.74E-56 | -1.69E-46 |
| MS.gene059756 | MS.gene30381 | 0.802699 | 4.96E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene30381 | 0.806615 | 7.55E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene30381 | 0.83787 | 4.03E-57 | -1.69E-46 |
| MS.gene060193 | MS.gene30381 | 0.826388 | 2.79E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene30381 | 0.82812 | 1.07E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene30381 | 0.818923 | 1.52E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene30381 | 0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene30381 | 0.819976 | 8.75E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene30381 | 0.860408 | 2.11E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30381.t1 | MTR_8g020590 | 99.519 | 208 | 1 | 0 | 1 | 208 | 1 | 208 | 4.55e-148 | 410 |
| MS.gene30381.t1 | MTR_2g041550 | 67.788 | 208 | 66 | 1 | 1 | 208 | 4 | 210 | 4.04e-94 | 273 |
| MS.gene30381.t1 | MTR_2g041570 | 64.423 | 208 | 74 | 0 | 1 | 208 | 3 | 210 | 2.02e-91 | 266 |
| MS.gene30381.t1 | MTR_2g041580 | 63.942 | 208 | 75 | 0 | 1 | 208 | 3 | 210 | 1.65e-90 | 264 |
| MS.gene30381.t1 | MTR_8g020610 | 59.330 | 209 | 82 | 2 | 1 | 208 | 1 | 207 | 3.52e-84 | 248 |
| MS.gene30381.t1 | MTR_8g020630 | 59.330 | 209 | 82 | 3 | 1 | 208 | 3 | 209 | 7.55e-82 | 242 |
| MS.gene30381.t1 | MTR_8g020650 | 60.938 | 192 | 73 | 2 | 17 | 208 | 20 | 209 | 1.98e-80 | 239 |
| MS.gene30381.t1 | MTR_8g020670 | 58.252 | 206 | 83 | 3 | 4 | 208 | 6 | 209 | 2.53e-79 | 236 |
| MS.gene30381.t1 | MTR_2g044040 | 51.675 | 209 | 98 | 3 | 1 | 208 | 3 | 209 | 6.97e-71 | 214 |
| MS.gene30381.t1 | MTR_2g045100 | 51.675 | 209 | 98 | 3 | 1 | 208 | 3 | 209 | 1.75e-68 | 208 |
| MS.gene30381.t1 | MTR_3g019710 | 51.675 | 209 | 98 | 3 | 1 | 208 | 3 | 209 | 3.91e-68 | 207 |
| MS.gene30381.t1 | MTR_2g036120 | 51.442 | 208 | 98 | 3 | 1 | 207 | 3 | 208 | 1.56e-67 | 206 |
| MS.gene30381.t1 | MTR_3g019650 | 50.481 | 208 | 101 | 2 | 1 | 208 | 3 | 208 | 2.20e-67 | 206 |
| MS.gene30381.t1 | MTR_3g019680 | 49.519 | 208 | 103 | 2 | 1 | 208 | 3 | 208 | 1.78e-65 | 201 |
| MS.gene30381.t1 | MTR_5g031460 | 49.761 | 209 | 102 | 3 | 1 | 208 | 3 | 209 | 5.47e-65 | 199 |
| MS.gene30381.t1 | MTR_0284s0010 | 50.239 | 209 | 101 | 3 | 1 | 208 | 3 | 209 | 1.80e-64 | 198 |
| MS.gene30381.t1 | MTR_8g020770 | 50.237 | 211 | 101 | 4 | 1 | 208 | 3 | 212 | 8.24e-64 | 197 |
| MS.gene30381.t1 | MTR_7g011340 | 51.031 | 194 | 93 | 2 | 15 | 208 | 18 | 209 | 3.52e-63 | 195 |
| MS.gene30381.t1 | MTR_4g010340 | 50.000 | 208 | 101 | 3 | 1 | 208 | 1 | 205 | 8.38e-63 | 194 |
| MS.gene30381.t1 | MTR_3g073170 | 47.895 | 190 | 93 | 4 | 20 | 208 | 26 | 210 | 2.20e-60 | 188 |
| MS.gene30381.t1 | MTR_2g019780 | 46.445 | 211 | 102 | 5 | 4 | 208 | 7 | 212 | 2.12e-59 | 186 |
| MS.gene30381.t1 | MTR_8g020760 | 47.087 | 206 | 105 | 3 | 5 | 208 | 8 | 211 | 4.62e-58 | 182 |
| MS.gene30381.t1 | MTR_8g020750 | 45.024 | 211 | 112 | 3 | 1 | 208 | 3 | 212 | 2.75e-57 | 180 |
| MS.gene30381.t1 | MTR_8g020763 | 46.067 | 178 | 95 | 1 | 31 | 208 | 14 | 190 | 2.23e-52 | 167 |
| MS.gene30381.t1 | MTR_3g019810 | 45.854 | 205 | 102 | 4 | 1 | 204 | 109 | 305 | 5.07e-52 | 170 |
| MS.gene30381.t1 | MTR_1g085140 | 40.426 | 188 | 110 | 1 | 19 | 204 | 28 | 215 | 1.07e-40 | 138 |
| MS.gene30381.t1 | MTR_4g027415 | 51.969 | 127 | 59 | 2 | 15 | 141 | 18 | 142 | 1.09e-38 | 130 |
| MS.gene30381.t1 | MTR_7g111240 | 39.683 | 189 | 112 | 1 | 18 | 204 | 23 | 211 | 3.03e-38 | 131 |
| MS.gene30381.t1 | MTR_1g085500 | 37.297 | 185 | 112 | 1 | 4 | 184 | 8 | 192 | 1.26e-37 | 130 |
| MS.gene30381.t1 | MTR_2g030855 | 39.130 | 184 | 104 | 3 | 18 | 199 | 25 | 202 | 2.70e-37 | 129 |
| MS.gene30381.t1 | MTR_7g111240 | 39.683 | 189 | 109 | 2 | 18 | 204 | 23 | 208 | 3.19e-37 | 129 |
| MS.gene30381.t1 | MTR_1g079490 | 40.838 | 191 | 105 | 4 | 19 | 202 | 26 | 215 | 3.38e-37 | 129 |
| MS.gene30381.t1 | MTR_2g031270 | 38.624 | 189 | 109 | 3 | 18 | 202 | 26 | 211 | 3.40e-37 | 129 |
| MS.gene30381.t1 | MTR_1g060120 | 40.113 | 177 | 98 | 3 | 19 | 188 | 30 | 205 | 6.96e-37 | 128 |
| MS.gene30381.t1 | MTR_1g023770 | 36.842 | 190 | 110 | 3 | 17 | 202 | 24 | 207 | 4.61e-36 | 125 |
| MS.gene30381.t1 | MTR_1g112200 | 35.577 | 208 | 116 | 5 | 1 | 202 | 10 | 205 | 5.75e-36 | 125 |
| MS.gene30381.t1 | MTR_6g005340 | 41.053 | 190 | 104 | 4 | 19 | 202 | 26 | 213 | 5.79e-36 | 126 |
| MS.gene30381.t1 | MTR_2g072560 | 53.509 | 114 | 51 | 2 | 1 | 113 | 3 | 115 | 9.06e-36 | 123 |
| MS.gene30381.t1 | MTR_4g017050 | 40.299 | 201 | 111 | 5 | 9 | 202 | 16 | 214 | 1.05e-35 | 125 |
| MS.gene30381.t1 | MTR_6g005360 | 40.526 | 190 | 105 | 4 | 19 | 202 | 26 | 213 | 2.29e-35 | 124 |
| MS.gene30381.t1 | MTR_4g017040 | 38.426 | 216 | 116 | 6 | 2 | 202 | 1 | 214 | 2.56e-35 | 124 |
| MS.gene30381.t1 | MTR_2g019250 | 40.299 | 201 | 111 | 5 | 9 | 202 | 16 | 214 | 2.82e-35 | 124 |
| MS.gene30381.t1 | MTR_6g005310 | 40.526 | 190 | 105 | 4 | 19 | 202 | 26 | 213 | 3.52e-35 | 124 |
| MS.gene30381.t1 | MTR_6g005330 | 37.674 | 215 | 119 | 5 | 1 | 202 | 1 | 213 | 5.02e-35 | 123 |
| MS.gene30381.t1 | MTR_5g036570 | 37.173 | 191 | 117 | 2 | 19 | 206 | 31 | 221 | 5.73e-35 | 123 |
| MS.gene30381.t1 | MTR_5g046410 | 39.801 | 201 | 112 | 5 | 9 | 202 | 16 | 214 | 5.79e-35 | 123 |
| MS.gene30381.t1 | MTR_5g046430 | 39.801 | 201 | 112 | 5 | 9 | 202 | 16 | 214 | 5.79e-35 | 123 |
| MS.gene30381.t1 | MTR_4g017030 | 39.801 | 201 | 112 | 5 | 9 | 202 | 16 | 214 | 5.79e-35 | 123 |
| MS.gene30381.t1 | MTR_2g030895 | 37.647 | 170 | 101 | 3 | 38 | 202 | 7 | 176 | 5.95e-32 | 114 |
| MS.gene30381.t1 | MTR_6g005380 | 40.437 | 183 | 98 | 6 | 19 | 193 | 26 | 205 | 6.44e-32 | 115 |
| MS.gene30381.t1 | MTR_2g030865 | 39.241 | 158 | 90 | 3 | 38 | 192 | 7 | 161 | 6.34e-31 | 112 |
| MS.gene30381.t1 | MTR_3g019610 | 49.524 | 105 | 51 | 2 | 1 | 104 | 3 | 106 | 1.98e-30 | 108 |
| MS.gene30381.t1 | MTR_6g005350 | 37.566 | 189 | 111 | 4 | 19 | 202 | 26 | 212 | 4.65e-30 | 110 |
| MS.gene30381.t1 | MTR_8g007300 | 35.294 | 153 | 96 | 2 | 18 | 168 | 29 | 180 | 4.38e-28 | 105 |
| MS.gene30381.t1 | MTR_2g031300 | 45.283 | 106 | 56 | 1 | 38 | 141 | 7 | 112 | 1.57e-25 | 97.4 |
| MS.gene30381.t1 | MTR_3g096330 | 33.571 | 140 | 92 | 1 | 34 | 173 | 598 | 736 | 2.25e-22 | 94.7 |
| MS.gene30381.t1 | MTR_2g086630 | 36.719 | 128 | 80 | 1 | 75 | 201 | 74 | 201 | 1.45e-20 | 85.9 |
| MS.gene30381.t1 | MTR_4g052770 | 35.606 | 132 | 84 | 1 | 71 | 201 | 71 | 202 | 1.53e-20 | 85.9 |
| MS.gene30381.t1 | MTR_2g086620 | 35.938 | 128 | 81 | 1 | 75 | 201 | 74 | 201 | 6.93e-20 | 84.0 |
| MS.gene30381.t1 | MTR_4g052780 | 34.848 | 132 | 85 | 1 | 71 | 201 | 71 | 202 | 7.14e-20 | 84.0 |
| MS.gene30381.t1 | MTR_2g086640 | 36.434 | 129 | 81 | 1 | 74 | 201 | 72 | 200 | 9.39e-20 | 83.6 |
| MS.gene30381.t1 | MTR_2g096110 | 30.894 | 123 | 69 | 2 | 47 | 168 | 12 | 119 | 1.45e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30381.t1 | AT1G72610 | 67.308 | 208 | 68 | 0 | 1 | 208 | 1 | 208 | 3.29e-92 | 269 |
| MS.gene30381.t1 | AT5G20630 | 63.285 | 207 | 76 | 0 | 1 | 207 | 4 | 210 | 4.57e-87 | 256 |
| MS.gene30381.t1 | AT1G18980 | 43.523 | 193 | 105 | 2 | 12 | 202 | 26 | 216 | 1.21e-44 | 148 |
| MS.gene30381.t1 | AT1G02335 | 39.683 | 189 | 112 | 1 | 18 | 204 | 27 | 215 | 8.78e-43 | 143 |
| MS.gene30381.t1 | AT1G09560 | 42.473 | 186 | 105 | 1 | 19 | 202 | 28 | 213 | 1.27e-41 | 140 |
| MS.gene30381.t1 | AT3G62020 | 38.119 | 202 | 119 | 3 | 7 | 202 | 12 | 213 | 6.72e-41 | 139 |
| MS.gene30381.t1 | AT3G04200 | 42.487 | 193 | 105 | 3 | 19 | 205 | 31 | 223 | 5.73e-40 | 136 |
| MS.gene30381.t1 | AT1G18970 | 39.409 | 203 | 117 | 3 | 4 | 202 | 16 | 216 | 9.55e-40 | 135 |
| MS.gene30381.t1 | AT5G39190 | 40.476 | 210 | 113 | 5 | 7 | 205 | 12 | 220 | 6.73e-39 | 134 |
| MS.gene30381.t1 | AT5G39160 | 40.476 | 210 | 113 | 5 | 7 | 205 | 12 | 220 | 7.10e-39 | 133 |
| MS.gene30381.t1 | AT5G39160 | 40.476 | 210 | 109 | 5 | 7 | 205 | 12 | 216 | 7.33e-39 | 133 |
| MS.gene30381.t1 | AT5G39130 | 40.000 | 210 | 114 | 5 | 7 | 205 | 12 | 220 | 2.32e-38 | 132 |
| MS.gene30381.t1 | AT5G26700 | 36.683 | 199 | 124 | 2 | 4 | 201 | 9 | 206 | 4.00e-38 | 131 |
| MS.gene30381.t1 | AT3G05930 | 41.916 | 167 | 96 | 1 | 19 | 184 | 27 | 193 | 5.54e-37 | 129 |
| MS.gene30381.t1 | AT3G62020 | 38.372 | 172 | 103 | 2 | 34 | 202 | 13 | 184 | 6.40e-37 | 127 |
| MS.gene30381.t1 | AT3G04150 | 36.744 | 215 | 127 | 5 | 2 | 208 | 12 | 225 | 9.52e-37 | 128 |
| MS.gene30381.t1 | AT5G38960 | 40.500 | 200 | 104 | 5 | 17 | 205 | 28 | 223 | 1.05e-36 | 128 |
| MS.gene30381.t1 | AT3G04150 | 35.242 | 227 | 127 | 4 | 2 | 208 | 12 | 238 | 2.11e-35 | 125 |
| MS.gene30381.t1 | AT3G10080 | 37.143 | 175 | 104 | 2 | 19 | 188 | 30 | 203 | 4.10e-35 | 124 |
| MS.gene30381.t1 | AT5G61750 | 38.596 | 171 | 99 | 3 | 4 | 169 | 6 | 175 | 1.05e-34 | 122 |
| MS.gene30381.t1 | AT3G05950 | 40.887 | 203 | 113 | 5 | 7 | 202 | 17 | 219 | 1.12e-34 | 123 |
| MS.gene30381.t1 | AT3G10080 | 37.143 | 175 | 104 | 2 | 19 | 188 | 101 | 274 | 1.31e-34 | 124 |
| MS.gene30381.t1 | AT5G38940 | 39.062 | 192 | 111 | 3 | 17 | 202 | 28 | 219 | 2.50e-34 | 122 |
| MS.gene30381.t1 | AT5G38940 | 39.062 | 192 | 111 | 3 | 17 | 202 | 52 | 243 | 3.86e-34 | 122 |
| MS.gene30381.t1 | AT5G39110 | 37.143 | 210 | 121 | 4 | 4 | 202 | 9 | 218 | 4.73e-34 | 121 |
| MS.gene30381.t1 | AT4G14630 | 40.860 | 186 | 95 | 4 | 5 | 179 | 14 | 195 | 1.28e-33 | 120 |
| MS.gene30381.t1 | AT5G38910 | 39.352 | 216 | 113 | 6 | 1 | 202 | 6 | 217 | 1.30e-33 | 120 |
| MS.gene30381.t1 | AT5G38930 | 38.542 | 192 | 112 | 3 | 17 | 202 | 28 | 219 | 5.30e-33 | 118 |
| MS.gene30381.t1 | AT3G04170 | 38.095 | 210 | 120 | 5 | 2 | 204 | 12 | 218 | 1.71e-32 | 117 |
| MS.gene30381.t1 | AT3G04190 | 40.116 | 172 | 96 | 3 | 19 | 186 | 30 | 198 | 2.04e-32 | 117 |
| MS.gene30381.t1 | AT5G39150 | 37.089 | 213 | 123 | 4 | 1 | 202 | 5 | 217 | 4.34e-32 | 116 |
| MS.gene30381.t1 | AT1G74820 | 39.189 | 148 | 88 | 1 | 20 | 167 | 41 | 186 | 5.26e-32 | 116 |
| MS.gene30381.t1 | AT5G39180 | 38.498 | 213 | 120 | 5 | 1 | 202 | 5 | 217 | 5.55e-32 | 115 |
| MS.gene30381.t1 | AT5G39190 | 37.143 | 210 | 98 | 5 | 7 | 205 | 12 | 198 | 6.13e-32 | 115 |
| MS.gene30381.t1 | AT5G39160 | 37.143 | 210 | 98 | 5 | 7 | 205 | 12 | 198 | 8.01e-32 | 115 |
| MS.gene30381.t1 | AT5G39120 | 35.885 | 209 | 127 | 3 | 1 | 202 | 9 | 217 | 2.30e-31 | 114 |
| MS.gene30381.t1 | AT3G04180 | 36.979 | 192 | 115 | 3 | 19 | 204 | 30 | 221 | 8.43e-31 | 112 |
| MS.gene30381.t1 | AT1G10460 | 36.126 | 191 | 101 | 5 | 19 | 202 | 23 | 199 | 1.38e-26 | 101 |
| MS.gene30381.t1 | AT5G38910 | 32.394 | 213 | 93 | 6 | 2 | 202 | 7 | 180 | 3.04e-17 | 76.6 |
Find 44 sgRNAs with CRISPR-Local
Find 47 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCAATTTCCAGCTGTTAA+TGG | 0.222823 | 8.1:-78705732 | MS.gene30381:CDS |
| TCAGATGACTTTGCATTTGA+AGG | 0.332801 | 8.1:-78705816 | MS.gene30381:CDS |
| AAGAAGCTTAAGAGTATTCT+TGG | 0.333318 | 8.1:-78705360 | MS.gene30381:CDS |
| TTTCCAGCTGTTAATGGTCT+TGG | 0.333339 | 8.1:-78705726 | MS.gene30381:CDS |
| ATTGAAGAAAGGTGAGCTTA+TGG | 0.345552 | 8.1:-78705559 | MS.gene30381:CDS |
| TTAAGCTTCTTGACAAGAAC+AGG | 0.390814 | 8.1:+78705372 | None:intergenic |
| TTGAACAGAAGCATTGGAAA+TGG | 0.427106 | 8.1:+78705914 | None:intergenic |
| ACTGTTGCAGCTGGCTTGCA+AGG | 0.435794 | 8.1:+78705843 | None:intergenic |
| AGGTTAGACCTTGGTCCTGC+TGG | 0.451460 | 8.1:-78705690 | MS.gene30381:CDS |
| ATAATGTTTGTTATGTTGCC+AGG | 0.455113 | 8.1:+78705783 | None:intergenic |
| AAGAGTATTCTTGGTGGCAG+TGG | 0.468240 | 8.1:-78705351 | MS.gene30381:CDS |
| GAAATCTTGAACAGAAGCAT+TGG | 0.490916 | 8.1:+78705908 | None:intergenic |
| TCTGAGGTTACTGTTGCAGC+TGG | 0.494812 | 8.1:+78705834 | None:intergenic |
| TATATCAAGACATTGAAGAA+AGG | 0.516212 | 8.1:-78705570 | MS.gene30381:CDS |
| GGAAATTGAGCAACAAATGC+AGG | 0.517121 | 8.1:+78705744 | None:intergenic |
| ACACAAGGTCACATCACTGC+TGG | 0.521846 | 8.1:-78705618 | MS.gene30381:CDS |
| AAATCAAGAATCTGAAGTCC+AGG | 0.530903 | 8.1:+78705453 | None:intergenic |
| CAGAAGCATTGGAAATGGAT+AGG | 0.534090 | 8.1:+78705919 | None:intergenic |
| TCTTGACAAGAACAGGATCA+AGG | 0.536649 | 8.1:+78705379 | None:intergenic |
| AAAGGCTCAGACACTCCTTC+AGG | 0.536936 | 8.1:-78705870 | MS.gene30381:CDS |
| CTGTTGCAGCTGGCTTGCAA+GGG | 0.536983 | 8.1:+78705844 | None:intergenic |
| TTTGAAGGCTTAATTGCACC+TGG | 0.556399 | 8.1:-78705801 | MS.gene30381:CDS |
| AGCAACAAATGCAGGTGTAA+CGG | 0.564694 | 8.1:+78705752 | None:intergenic |
| AAAGTGGTCTTAGTGATCAA+AGG | 0.569186 | 8.1:+78705402 | None:intergenic |
| CACCAGGGTGAGTGTGAAGT+GGG | 0.573025 | 8.1:+78705661 | None:intergenic |
| AGACCAAGACCATTAACAGC+TGG | 0.577445 | 8.1:+78705723 | None:intergenic |
| GCACCAGGGTGAGTGTGAAG+TGG | 0.581572 | 8.1:+78705660 | None:intergenic |
| ACAAGAAGTTCACTAGCACC+AGG | 0.581623 | 8.1:+78705645 | None:intergenic |
| ATCCCACTTCACACTCACCC+TGG | 0.585390 | 8.1:-78705663 | MS.gene30381:CDS |
| AAGAACAGGATCAAGGAAAG+TGG | 0.596670 | 8.1:+78705386 | None:intergenic |
| TCTGCAGCAAGGTTAGACCT+TGG | 0.601086 | 8.1:-78705699 | MS.gene30381:CDS |
| AAGCTTAAGAGTATTCTTGG+TGG | 0.606685 | 8.1:-78705357 | MS.gene30381:CDS |
| TGAAGTGGGATAACACCAGC+AGG | 0.607179 | 8.1:+78705675 | None:intergenic |
| GGCTTGCAAGGGTAGCCTGA+AGG | 0.613463 | 8.1:+78705855 | None:intergenic |
| TGGATAGGAAAAGTGAAAGG+AGG | 0.620226 | 8.1:+78705934 | None:intergenic |
| GTCTTGGTCTCTCTGCAGCA+AGG | 0.623079 | 8.1:-78705710 | MS.gene30381:CDS |
| TTCTGTGTAGCAGATATCAA+AGG | 0.629502 | 8.1:-78705888 | MS.gene30381:CDS |
| TGAAAATGCAACAAACCTTG+TGG | 0.630902 | 8.1:+78705531 | None:intergenic |
| GAACTTCTTGTTGTGACACA+AGG | 0.632584 | 8.1:-78705633 | MS.gene30381:CDS |
| GGATAACACCAGCAGGACCA+AGG | 0.650304 | 8.1:+78705682 | None:intergenic |
| TTCAAATGCAAAGTCATCTG+AGG | 0.653626 | 8.1:+78705818 | None:intergenic |
| CAAGAAGTTCACTAGCACCA+GGG | 0.656716 | 8.1:+78705646 | None:intergenic |
| AAATGGATAGGAAAAGTGAA+AGG | 0.668197 | 8.1:+78705931 | None:intergenic |
| AACAAATGCAGGTGTAACGG+CGG | 0.707043 | 8.1:+78705755 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATATCAAGACATTGAAGAA+AGG | - | chr8.1:78705728-78705747 | MS.gene30381:CDS | 25.0% |
| AAATGGATAGGAAAAGTGAA+AGG | + | chr8.1:78705370-78705389 | None:intergenic | 30.0% | |
| !! | AAGAAGCTTAAGAGTATTCT+TGG | - | chr8.1:78705938-78705957 | MS.gene30381:CDS | 30.0% |
| !! | ATAATGTTTGTTATGTTGCC+AGG | + | chr8.1:78705518-78705537 | None:intergenic | 30.0% |
| ATTGAAGAAAGGTGAGCTTA+TGG | - | chr8.1:78705739-78705758 | MS.gene30381:CDS | 35.0% | |
| TCAGATGACTTTGCATTTGA+AGG | - | chr8.1:78705482-78705501 | MS.gene30381:CDS | 35.0% | |
| TGAAAATGCAACAAACCTTG+TGG | + | chr8.1:78705770-78705789 | None:intergenic | 35.0% | |
| TTAAGCTTCTTGACAAGAAC+AGG | + | chr8.1:78705929-78705948 | None:intergenic | 35.0% | |
| TTCAAATGCAAAGTCATCTG+AGG | + | chr8.1:78705483-78705502 | None:intergenic | 35.0% | |
| TTCTGTGTAGCAGATATCAA+AGG | - | chr8.1:78705410-78705429 | MS.gene30381:CDS | 35.0% | |
| ! | AAAGTGGTCTTAGTGATCAA+AGG | + | chr8.1:78705899-78705918 | None:intergenic | 35.0% |
| ! | AAATCAAGAATCTGAAGTCC+AGG | + | chr8.1:78705848-78705867 | None:intergenic | 35.0% |
| ! | GAAATCTTGAACAGAAGCAT+TGG | + | chr8.1:78705393-78705412 | None:intergenic | 35.0% |
| !! | AAGCTTAAGAGTATTCTTGG+TGG | - | chr8.1:78705941-78705960 | MS.gene30381:CDS | 35.0% |
| !! | TTGAACAGAAGCATTGGAAA+TGG | + | chr8.1:78705387-78705406 | None:intergenic | 35.0% |
| AAGAACAGGATCAAGGAAAG+TGG | + | chr8.1:78705915-78705934 | None:intergenic | 40.0% | |
| AGCAACAAATGCAGGTGTAA+CGG | + | chr8.1:78705549-78705568 | None:intergenic | 40.0% | |
| GCTCAATTTCCAGCTGTTAA+TGG | - | chr8.1:78705566-78705585 | MS.gene30381:CDS | 40.0% | |
| GGAAATTGAGCAACAAATGC+AGG | + | chr8.1:78705557-78705576 | None:intergenic | 40.0% | |
| TCTTGACAAGAACAGGATCA+AGG | + | chr8.1:78705922-78705941 | None:intergenic | 40.0% | |
| TGGATAGGAAAAGTGAAAGG+AGG | + | chr8.1:78705367-78705386 | None:intergenic | 40.0% | |
| TTTCCAGCTGTTAATGGTCT+TGG | - | chr8.1:78705572-78705591 | MS.gene30381:CDS | 40.0% | |
| TTTGAAGGCTTAATTGCACC+TGG | - | chr8.1:78705497-78705516 | MS.gene30381:CDS | 40.0% | |
| ! | GAACTTCTTGTTGTGACACA+AGG | - | chr8.1:78705665-78705684 | MS.gene30381:CDS | 40.0% |
| ! | GAGCTTATGGTTTTTCCACA+AGG | - | chr8.1:78705752-78705771 | MS.gene30381:CDS | 40.0% |
| !! | CAGAAGCATTGGAAATGGAT+AGG | + | chr8.1:78705382-78705401 | None:intergenic | 40.0% |
| !! | TTGCATTTTCAAGCTACTGC+TGG | - | chr8.1:78705779-78705798 | MS.gene30381:CDS | 40.0% |
| AACAAATGCAGGTGTAACGG+CGG | + | chr8.1:78705546-78705565 | None:intergenic | 45.0% | |
| ACAAGAAGTTCACTAGCACC+AGG | + | chr8.1:78705656-78705675 | None:intergenic | 45.0% | |
| AGACCAAGACCATTAACAGC+TGG | + | chr8.1:78705578-78705597 | None:intergenic | 45.0% | |
| CAAGAAGTTCACTAGCACCA+GGG | + | chr8.1:78705655-78705674 | None:intergenic | 45.0% | |
| !! | AAGAGTATTCTTGGTGGCAG+TGG | - | chr8.1:78705947-78705966 | MS.gene30381:CDS | 45.0% |
| !!! | GTTTTTAGCAGTGCTAGTCC+TGG | - | chr8.1:78705827-78705846 | MS.gene30381:CDS | 45.0% |
| AAAGGCTCAGACACTCCTTC+AGG | - | chr8.1:78705428-78705447 | MS.gene30381:CDS | 50.0% | |
| ACACAAGGTCACATCACTGC+TGG | - | chr8.1:78705680-78705699 | MS.gene30381:CDS | 50.0% | |
| TCTGCAGCAAGGTTAGACCT+TGG | - | chr8.1:78705599-78705618 | MS.gene30381:CDS | 50.0% | |
| TGAAGTGGGATAACACCAGC+AGG | + | chr8.1:78705626-78705645 | None:intergenic | 50.0% | |
| ! | TCTGAGGTTACTGTTGCAGC+TGG | + | chr8.1:78705467-78705486 | None:intergenic | 50.0% |
| AGGTTAGACCTTGGTCCTGC+TGG | - | chr8.1:78705608-78705627 | MS.gene30381:CDS | 55.0% | |
| ATCCCACTTCACACTCACCC+TGG | - | chr8.1:78705635-78705654 | MS.gene30381:CDS | 55.0% | |
| CACCAGGGTGAGTGTGAAGT+GGG | + | chr8.1:78705640-78705659 | None:intergenic | 55.0% | |
| GGATAACACCAGCAGGACCA+AGG | + | chr8.1:78705619-78705638 | None:intergenic | 55.0% | |
| GTCTTGGTCTCTCTGCAGCA+AGG | - | chr8.1:78705588-78705607 | MS.gene30381:CDS | 55.0% | |
| !! | ACTGTTGCAGCTGGCTTGCA+AGG | + | chr8.1:78705458-78705477 | None:intergenic | 55.0% |
| !! | CTGTTGCAGCTGGCTTGCAA+GGG | + | chr8.1:78705457-78705476 | None:intergenic | 55.0% |
| GCACCAGGGTGAGTGTGAAG+TGG | + | chr8.1:78705641-78705660 | None:intergenic | 60.0% | |
| GGCTTGCAAGGGTAGCCTGA+AGG | + | chr8.1:78705446-78705465 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 78705347 | 78705973 | 78705347 | ID=MS.gene30381 |
| chr8.1 | mRNA | 78705347 | 78705973 | 78705347 | ID=MS.gene30381.t1;Parent=MS.gene30381 |
| chr8.1 | exon | 78705347 | 78705973 | 78705347 | ID=MS.gene30381.t1.exon1;Parent=MS.gene30381.t1 |
| chr8.1 | CDS | 78705347 | 78705973 | 78705347 | ID=cds.MS.gene30381.t1;Parent=MS.gene30381.t1 |
| Gene Sequence |
| Protein sequence |
