AlfalfaGEDB | MS.gene31177

M. sativa cultivar XinJiangDaYe / MS.gene31177

KEGG: K02893
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00276.23 PF03939.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31177.t1	XP_003597322.1	100	154	0	0	1	154	1	154	5.70E-76	293.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31177.t1	Q9AT35	87.0	154	20	0	1	154	1	154	1.6e-66	253.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31177.t1	B7FGR0	100.0	154	0	0	1	154	1	154	4.1e-76	293.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050290	MS.gene31177	0.854176	1.46E-61	-1.69E-46
MS.gene050791	MS.gene31177	0.82306	1.70E-53	-1.69E-46
MS.gene050916	MS.gene31177	0.813384	2.63E-51	-1.69E-46
MS.gene053148	MS.gene31177	0.806069	9.84E-50	-1.69E-46
MS.gene054937	MS.gene31177	0.835399	1.72E-56	-1.69E-46
MS.gene056075	MS.gene31177	0.812876	3.40E-51	-1.69E-46
MS.gene056917	MS.gene31177	0.888743	4.50E-73	-1.69E-46
MS.gene056978	MS.gene31177	0.806449	8.18E-50	-1.69E-46
MS.gene057092	MS.gene31177	0.803094	4.11E-49	-1.69E-46
MS.gene058354	MS.gene31177	0.814594	1.42E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene43350	MS.gene31177	PPI
MS.gene95644	MS.gene31177	PPI
MS.gene09845	MS.gene31177	PPI
MS.gene45470	MS.gene31177	PPI
MS.gene67365	MS.gene31177	PPI
MS.gene31177	MS.gene45470	PPI
MS.gene022752	MS.gene31177	PPI
MS.gene018553	MS.gene31177	PPI
MS.gene99779	MS.gene31177	PPI
MS.gene066300	MS.gene31177	PPI
MS.gene39294	MS.gene31177	PPI
MS.gene060923	MS.gene31177	PPI
MS.gene45646	MS.gene31177	PPI
MS.gene041623	MS.gene31177	PPI
MS.gene41329	MS.gene31177	PPI
MS.gene059878	MS.gene31177	PPI
MS.gene61130	MS.gene31177	PPI
MS.gene31177	MS.gene061428	PPI
MS.gene032493	MS.gene31177	PPI
MS.gene59485	MS.gene31177	PPI
MS.gene75537	MS.gene31177	PPI
MS.gene031378	MS.gene31177	PPI
MS.gene44230	MS.gene31177	PPI
MS.gene028609	MS.gene31177	PPI
MS.gene47347	MS.gene31177	PPI
MS.gene53720	MS.gene31177	PPI
MS.gene30933	MS.gene31177	PPI
MS.gene67460	MS.gene31177	PPI
MS.gene066301	MS.gene31177	PPI
MS.gene62620	MS.gene31177	PPI
MS.gene64512	MS.gene31177	PPI
MS.gene000480	MS.gene31177	PPI
MS.gene012127	MS.gene31177	PPI
MS.gene061428	MS.gene31177	PPI
MS.gene90360	MS.gene31177	PPI
MS.gene95889	MS.gene31177	PPI
MS.gene061905	MS.gene31177	PPI
MS.gene045180	MS.gene31177	PPI
MS.gene020215	MS.gene31177	PPI
MS.gene64789	MS.gene31177	PPI
MS.gene91058	MS.gene31177	PPI
MS.gene31177	MS.gene067072	PPI
MS.gene066348	MS.gene31177	PPI
MS.gene035396	MS.gene31177	PPI
MS.gene040151	MS.gene31177	PPI
MS.gene021058	MS.gene31177	PPI
MS.gene017622	MS.gene31177	PPI
MS.gene89672	MS.gene31177	PPI
MS.gene68079	MS.gene31177	PPI
MS.gene034931	MS.gene31177	PPI
MS.gene059880	MS.gene31177	PPI
MS.gene004091	MS.gene31177	PPI
MS.gene069038	MS.gene31177	PPI
MS.gene31177	MS.gene93783	PPI
MS.gene037902	MS.gene31177	PPI
MS.gene77392	MS.gene31177	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31177.t1	MTR_2g096340	100.000	154	0	0	1	154	1	154	4.16e-107	302
MS.gene31177.t1	MTR_2g096340	95.652	161	0	1	1	154	1	161	2.58e-104	295
MS.gene31177.t1	MTR_4g063060	95.364	151	6	1	4	154	3	152	5.31e-81	236
MS.gene31177.t1	MTR_7g023260	93.506	154	10	0	1	154	1	154	4.51e-71	211
MS.gene31177.t1	MTR_4g007840	94.595	37	2	0	118	154	36	72	2.49e-18	74.7

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31177.t1	AT3G55280	87.662	154	19	1	154	1	154	1.82e-71	212
MS.gene31177.t1	AT3G55280	87.662	154	19	1	154	1	154	1.82e-71	212
MS.gene31177.t1	AT2G39460	87.662	154	19	1	154	1	154	2.93e-68	204
MS.gene31177.t1	AT2G39460	87.662	154	19	1	154	1	154	2.93e-68	204
MS.gene31177.t1	AT3G55280	93.220	118	8	37	154	31	148	4.43e-67	201

Find 40 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACAAGATTGGGATTATTTA+AGG	0.136899	2.4:-6922749	None:intergenic
CTTCTTTGCCTTCTTCTTGA+TGG	0.213233	2.4:+6923394	None:intergenic
GCACTAATCCGAGGGTATTT+TGG	0.229197	2.4:+6923317	None:intergenic
GATCAAGGTGTTAACTTTCT+TGG	0.259114	2.4:+6923127	None:intergenic
CAACCTTACATAGGCCTTCT+TGG	0.259824	2.4:+6922802	None:intergenic
GCTTTCAAGGCCTGTGCCTT+TGG	0.317092	2.4:+6923443	None:intergenic
CTATCCCTAGATAAAGTCTT+TGG	0.341250	2.4:+6923344	None:intergenic
CACTGCTTTCGCAGCTTTCA+AGG	0.343655	2.4:+6923430	None:intergenic
ACAGGCCAAAGACTTTATCT+AGG	0.384705	2.4:-6923349	MS.gene31177:CDS
GACACCTGATTATGATGCTT+TGG	0.412386	2.4:-6922780	MS.gene31177:CDS
TTGGATGTTGCAAACAAGAT+TGG	0.413392	2.4:-6922761	MS.gene31177:CDS
TGGATGTTGCAAACAAGATT+GGG	0.427718	2.4:-6922760	MS.gene31177:CDS
ATAGGCCTTCTTGGTGCCAT+CGG	0.428001	2.4:+6922811	None:intergenic
AGAAGAAGGCAAAGAAGATC+AGG	0.439428	2.4:-6923388	MS.gene31177:CDS
CAAGGCCTGTGCCTTTGGAT+CGG	0.452797	2.4:+6923448	None:intergenic
AGGTGTTAACTTTCTTGGCC+TGG	0.453520	2.4:+6923132	None:intergenic
ACATCCAAAGCATCATAATC+AGG	0.461568	2.4:+6922776	None:intergenic
GCTGCGAAAGCAGTGAAGTC+AGG	0.467790	2.4:-6923422	MS.gene31177:CDS
TAGGCCTTCTTGGTGCCATC+GGG	0.494781	2.4:+6922812	None:intergenic
TAATGATCAAGTTTGTTCCT+TGG	0.498760	2.4:+6923290	None:intergenic
GATTCAATGGCTCCACCAAA+AGG	0.506159	2.4:-6924862	None:intergenic
AGAAAGTTAACACCTTGATC+AGG	0.514403	2.4:-6923124	MS.gene31177:intron
GATTGAAGACAACAACACTT+TGG	0.518542	2.4:-6923222	MS.gene31177:CDS
CAAAGACTTTATCTAGGGAT+AGG	0.519733	2.4:-6923343	MS.gene31177:CDS
GAAGAAAATGTACGACATCC+AGG	0.525002	2.4:-6923150	MS.gene31177:CDS
CCTAAAGGCTTACCTGATCA+AGG	0.532987	2.4:+6923112	None:intergenic
CAGGCCCGATGGCACCAAGA+AGG	0.551305	2.4:-6922816	MS.gene31177:CDS
GCACCAAGAAGGCCTATGTA+AGG	0.556146	2.4:-6922805	MS.gene31177:CDS
AGGCACTGCCATCAAGAAGA+AGG	0.565573	2.4:-6923402	MS.gene31177:CDS
CAGGCCAAAGACTTTATCTA+GGG	0.565675	2.4:-6923348	MS.gene31177:CDS
GAAGACCGATCCAAAGGCAC+AGG	0.567558	2.4:-6923453	MS.gene31177:CDS
TAGATAAAGTCTTTGGCCTG+TGG	0.590574	2.4:+6923351	None:intergenic
GGACAACTGTTACATTCCAC+AGG	0.605601	2.4:-6923367	MS.gene31177:CDS
TGCAAAGAAGACCGATCCAA+AGG	0.612710	2.4:-6923459	MS.gene31177:CDS
ATAGGAATCCAAAATACCCT+CGG	0.629797	2.4:-6923325	MS.gene31177:CDS
ATCAGGTGTCAACCTTACAT+AGG	0.633043	2.4:+6922793	None:intergenic
ATTGCTGACTCAGTTGTGAG+CGG	0.651573	2.4:+6923251	None:intergenic
TTGGTGTAGCACTAATCCGA+GGG	0.658734	2.4:+6923309	None:intergenic
CTTGGTGTAGCACTAATCCG+AGG	0.662347	2.4:+6923308	None:intergenic
CTCGGATTAGTGCTACACCA+AGG	0.713270	2.4:-6923307	MS.gene31177:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTAGAACTTAAAATTTTAT+AGG	-	chr2.4:6923225-6923244	MS.gene31177:CDS	15.0%
!!!	ATAATCTCATTTTTATGTTA+TGG	-	chr2.4:6923018-6923037	MS.gene31177:intron	15.0%
!!!	TTATTTTGGTTTTGTTAAAA+TGG	-	chr2.4:6923650-6923669	MS.gene31177:intron	15.0%
!!!	TTATTTTGGTTTTGTTAAAA+TGG	+	chr2.4:6923669-6923650	None:intergenic	15.0%
!!	ATAATAAAGAAATGAGAATG+CGG	+	chr2.4:6923294-6923313	None:intergenic	20.0%
!!	ATATAGCAAAAGATCTAAAT+TGG	+	chr2.4:6923195-6923214	None:intergenic	20.0%
!!	CTCATGTTATTATTTACAAT+GGG	+	chr2.4:6924720-6924739	None:intergenic	20.0%
!!	TCTCATGTTATTATTTACAA+TGG	+	chr2.4:6924721-6924740	None:intergenic	20.0%
!!!	AGCTATTTTGTATACATAAA+AGG	+	chr2.4:6924063-6924082	None:intergenic	20.0%
!!!	GTTATTTTCAGAATCAATTT+TGG	+	chr2.4:6923155-6923174	None:intergenic	20.0%
!!!	GTTTTGATTAAAAAAATTGC+TGG	+	chr2.4:6923449-6923468	None:intergenic	20.0%
!!!	TAAATATTGGTTTATCTACA+CGG	-	chr2.4:6922903-6922922	MS.gene31177:intron	20.0%
!!!	TTTTGTTGAATAGAAGATTT+AGG	-	chr2.4:6923777-6923796	MS.gene31177:intron	20.0%
!	AAACTGCTTTACAATAATGT+GGG	+	chr2.4:6924750-6924769	None:intergenic	25.0%
!	AATAAGTTGTTTATCCAAAC+AGG	-	chr2.4:6924036-6924055	MS.gene31177:intron	25.0%
!	GACTATTGAAAAAGAAAAGA+AGG	+	chr2.4:6922783-6922802	None:intergenic	25.0%
!	TAAACTGCTTTACAATAATG+TGG	+	chr2.4:6924751-6924770	None:intergenic	25.0%
!	TAATAAAGAAATGAGAATGC+GGG	+	chr2.4:6923293-6923312	None:intergenic	25.0%
!!	CAAATTTGTTCAGTAATTCA+TGG	-	chr2.4:6924533-6924552	MS.gene31177:intron	25.0%
!!!	GATTATATAGCAATTTTAGC+TGG	+	chr2.4:6923004-6923023	None:intergenic	25.0%
!!!	GTTTTGATTAAAAAAGTTGC+TGG	-	chr2.4:6923609-6923628	MS.gene31177:intron	25.0%
	AGCTGACAAAAAGAAAATCA+AGG	-	chr2.4:6924427-6924446	MS.gene31177:intron	30.0%
	ATAAGCTATTCTTGTGCAAA+TGG	+	chr2.4:6923975-6923994	None:intergenic	30.0%
	ATCTCCATGATTATTGCTTT+CGG	-	chr2.4:6923688-6923707	MS.gene31177:intron	30.0%
	ATGAAAACAGATGCAGAAAT+TGG	+	chr2.4:6922834-6922853	None:intergenic	30.0%
	CAAAAAAGATCACAACCTAA+AGG	+	chr2.4:6924513-6924532	None:intergenic	30.0%
	GTAATAACATGTACATACAC+TGG	-	chr2.4:6924631-6924650	MS.gene31177:intron	30.0%
	TAAGCTATTCTTGTGCAAAT+GGG	+	chr2.4:6923974-6923993	None:intergenic	30.0%
	TATACATAAAAGGTCCTGTT+TGG	+	chr2.4:6924053-6924072	None:intergenic	30.0%
	TATCATATCCCTTCACAATA+GGG	+	chr2.4:6924686-6924705	None:intergenic	30.0%
!	AGGATAGATGAAATACCTTT+TGG	+	chr2.4:6922763-6922782	None:intergenic	30.0%
!	ATAGATGAAATACCTTTTGG+TGG	+	chr2.4:6922760-6922779	None:intergenic	30.0%
!	CGAGTTTCTGGATTAAATAT+TGG	-	chr2.4:6922890-6922909	MS.gene31177:intron	30.0%
!	CTTTTTCTTTTTGTAGGTGA+TGG	-	chr2.4:6924125-6924144	MS.gene31177:intron	30.0%
!	GGTCATCTTTTTCTTTTTGT+AGG	-	chr2.4:6924119-6924138	MS.gene31177:intron	30.0%
!	TAATGATCAAGTTTGTTCCT+TGG	+	chr2.4:6924320-6924339	None:intergenic	30.0%
!!	AATAATCTGTGTTTTTGTGC+CGG	-	chr2.4:6922934-6922953	MS.gene31177:intron	30.0%
!!	TAGAAGATTTAGGACCTTTT+TGG	-	chr2.4:6923787-6923806	MS.gene31177:intron	30.0%
!!!	ATTTGTTTTGTGAGACTGTT+TGG	-	chr2.4:6923838-6923857	MS.gene31177:intron	30.0%
!!!	TGATTTGCTTGGACTTATTT+TGG	-	chr2.4:6923636-6923655	MS.gene31177:intron	30.0%
!!!	TGATTTGCTTGGTCTTATTT+TGG	+	chr2.4:6923422-6923441	None:intergenic	30.0%
!!!	TGTACATACACTGGTTTTTA+TGG	-	chr2.4:6924640-6924659	MS.gene31177:intron	30.0%
!!!	TTTGTTTTGTGAGACTGTTT+GGG	-	chr2.4:6923839-6923858	MS.gene31177:intron	30.0%
	AACACCGAAAGCAATAATCA+TGG	+	chr2.4:6923695-6923714	None:intergenic	35.0%
	AGAAAGTTAACACCTTGATC+AGG	-	chr2.4:6924483-6924502	MS.gene31177:intron	35.0%
	ATAGGAATCCAAAATACCCT+CGG	-	chr2.4:6924282-6924301	MS.gene31177:intron	35.0%
	CAAAGACTTTATCTAGGGAT+AGG	-	chr2.4:6924264-6924283	MS.gene31177:intron	35.0%
	CTATCCCTAGATAAAGTCTT+TGG	+	chr2.4:6924266-6924285	None:intergenic	35.0%
	GATTGAAGACAACAACACTT+TGG	-	chr2.4:6924385-6924404	MS.gene31177:intron	35.0%
	GTATCATATCCCTTCACAAT+AGG	+	chr2.4:6924687-6924706	None:intergenic	35.0%
	TCTACTCGAATCAAATCTAC+CGG	+	chr2.4:6922956-6922975	None:intergenic	35.0%
	TGAAAGAAGCCAATCCAAAA+AGG	+	chr2.4:6923804-6923823	None:intergenic	35.0%
	TGGATGTTGCAAACAAGATT+GGG	-	chr2.4:6924847-6924866	MS.gene31177:intron	35.0%
	TTGGATGTTGCAAACAAGAT+TGG	-	chr2.4:6924846-6924865	MS.gene31177:intron	35.0%
!	AAATGAAGCATCCAGAGAAA+TGG	+	chr2.4:6923728-6923747	None:intergenic	35.0%
!	AACTTTGCATGTTTTCTTGC+AGG	-	chr2.4:6924772-6924791	MS.gene31177:intron	35.0%
!	AATGAAGCATCCAGAGAAAT+GGG	+	chr2.4:6923727-6923746	None:intergenic	35.0%
!	ACATCCAAAGCATCATAATC+AGG	+	chr2.4:6924834-6924853	None:intergenic	35.0%
!	GATCAAGGTGTTAACTTTCT+TGG	+	chr2.4:6924483-6924502	None:intergenic	35.0%
!	GATGTCGTACATTTTCTTCA+CGG	+	chr2.4:6924456-6924475	None:intergenic	35.0%
!!	GATTTAGGACCTTTTTGGAT+TGG	-	chr2.4:6923792-6923811	MS.gene31177:intron	35.0%
!!	TCTGGATGCTTCATTTTTCT+GGG	-	chr2.4:6923732-6923751	MS.gene31177:intron	35.0%
!!!	AGCAATTTTAGCTGGCATTA+AGG	+	chr2.4:6922996-6923015	None:intergenic	35.0%
	ACAGGCCAAAGACTTTATCT+AGG	-	chr2.4:6924258-6924277	MS.gene31177:intron	40.0%
	AGAAGAAGGCAAAGAAGATC+AGG	-	chr2.4:6924219-6924238	MS.gene31177:intron	40.0%
	ATCAGGTGTCAACCTTACAT+AGG	+	chr2.4:6924817-6924836	None:intergenic	40.0%
	ATGTTTCCACGAGTTACGTT+GGG	+	chr2.4:6923918-6923937	None:intergenic	40.0%
	CAGGCCAAAGACTTTATCTA+GGG	-	chr2.4:6924259-6924278	MS.gene31177:intron	40.0%
	CAGTCTCACAAAACAAATGC+CGG	+	chr2.4:6923836-6923855	None:intergenic	40.0%
	CTCCATGATTATTGCTTTCG+AGG	+	chr2.4:6923709-6923690	None:intergenic	40.0%
	CTTCTTTGCCTTCTTCTTGA+TGG	+	chr2.4:6924216-6924235	None:intergenic	40.0%
	GAAGAAAATGTACGACATCC+AGG	-	chr2.4:6924457-6924476	MS.gene31177:intron	40.0%
	GACACCTGATTATGATGCTT+TGG	-	chr2.4:6924827-6924846	MS.gene31177:intron	40.0%
	GACCTCGAAAGCAATAATCA+TGG	-	chr2.4:6923363-6923382	MS.gene31177:CDS	40.0%
	GCGGGAATAGCAAACAAATA+AGG	+	chr2.4:6923275-6923294	None:intergenic	40.0%
	GCTTCTTTCAGCTTATCTAC+CGG	-	chr2.4:6923814-6923833	MS.gene31177:intron	40.0%
	TAGATAAAGTCTTTGGCCTG+TGG	+	chr2.4:6924259-6924278	None:intergenic	40.0%
	TTAGAGTCATCCCATTTCTC+TGG	-	chr2.4:6923714-6923733	MS.gene31177:intron	40.0%
	TTGCTGCATGAAATGTGACT+AGG	-	chr2.4:6924098-6924117	MS.gene31177:intron	40.0%
!!	AGACTTGTTGAGTTGAATGC+TGG	-	chr2.4:6924563-6924582	MS.gene31177:intron	40.0%
!!	CTCTGGATGCTTCATTTTTC+TGG	-	chr2.4:6923731-6923750	MS.gene31177:intron	40.0%
!!	TTGCTGGAACATGATTTGCT+TGG	-	chr2.4:6923625-6923644	MS.gene31177:intron	40.0%
!!	TTGCTGGAACATGATTTGCT+TGG	+	chr2.4:6923644-6923625	None:intergenic	40.0%
	AGGTGTTAACTTTCTTGGCC+TGG	+	chr2.4:6924478-6924497	None:intergenic	45.0%
	ATGGCACACTGTTATGCTCA+CGG	-	chr2.4:6924659-6924678	MS.gene31177:intron	45.0%
	CAACCTTACATAGGCCTTCT+TGG	+	chr2.4:6924808-6924827	None:intergenic	45.0%
	CCTAAAGGCTTACCTGATCA+AGG	+	chr2.4:6924498-6924517	None:intergenic	45.0%
	CCTTGATCAGGTAAGCCTTT+AGG	-	chr2.4:6924495-6924514	MS.gene31177:intron	45.0%
	GATGTTTCCACGAGTTACGT+TGG	+	chr2.4:6923919-6923938	None:intergenic	45.0%
	GGACAACTGTTACATTCCAC+AGG	-	chr2.4:6924240-6924259	MS.gene31177:intron	45.0%
	TGCAAAGAAGACCGATCCAA+AGG	-	chr2.4:6924148-6924167	MS.gene31177:intron	45.0%
	TGTTTCCACGAGTTACGTTG+GGG	+	chr2.4:6923917-6923936	None:intergenic	45.0%
	TTGGTGTAGCACTAATCCGA+GGG	+	chr2.4:6924301-6924320	None:intergenic	45.0%
!!	ATTGCTGACTCAGTTGTGAG+CGG	+	chr2.4:6924359-6924378	None:intergenic	45.0%
!!!	GCACTAATCCGAGGGTATTT+TGG	+	chr2.4:6924293-6924312	None:intergenic	45.0%
	CACTGCTTTCGCAGCTTTCA+AGG	+	chr2.4:6924180-6924199	None:intergenic	50.0%
	GCACCAAGAAGGCCTATGTA+AGG	-	chr2.4:6924802-6924821	MS.gene31177:intron	50.0%
	GTTTCCACGAGTTACGTTGG+GGG	+	chr2.4:6923916-6923935	None:intergenic	50.0%
	TCACTGCTTGCACGAGTTTC+TGG	-	chr2.4:6922878-6922897	MS.gene31177:intron	50.0%
	TGGCACACTGTTATGCTCAC+GGG	-	chr2.4:6924660-6924679	MS.gene31177:intron	50.0%
!	AGGCACTGCCATCAAGAAGA+AGG	-	chr2.4:6924205-6924224	MS.gene31177:intron	50.0%
!	ATGTTTTCTTGCAGGCCCGA+TGG	-	chr2.4:6924780-6924799	MS.gene31177:intron	50.0%
!	CTTGGTGTAGCACTAATCCG+AGG	+	chr2.4:6924302-6924321	None:intergenic	50.0%
!!	ATAGGCCTTCTTGGTGCCAT+CGG	+	chr2.4:6924799-6924818	None:intergenic	50.0%
!!	CTCGGATTAGTGCTACACCA+AGG	-	chr2.4:6924300-6924319	MS.gene31177:intron	50.0%
	AGTTCCCCCAACGTAACTCG+TGG	-	chr2.4:6923909-6923928	MS.gene31177:intron	55.0%
	CAAGGCCTGTGCCTTTGGAT+CGG	+	chr2.4:6924162-6924181	None:intergenic	55.0%
	CTCACGGGCCCTATTGTGAA+GGG	-	chr2.4:6924675-6924694	MS.gene31177:intron	55.0%
	GCTGCGAAAGCAGTGAAGTC+AGG	-	chr2.4:6924185-6924204	MS.gene31177:intron	55.0%
	GCTTTCAAGGCCTGTGCCTT+TGG	+	chr2.4:6924167-6924186	None:intergenic	55.0%
!	GAAGACCGATCCAAAGGCAC+AGG	-	chr2.4:6924154-6924173	MS.gene31177:intron	55.0%
!!	TAGGCCTTCTTGGTGCCATC+GGG	+	chr2.4:6924798-6924817	None:intergenic	55.0%
	GCTCACGGGCCCTATTGTGA+AGG	-	chr2.4:6924674-6924693	MS.gene31177:intron	60.0%
	CAGGCCCGATGGCACCAAGA+AGG	-	chr2.4:6924791-6924810	MS.gene31177:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	6922751	6924878	6922751	ID=MS.gene31177
chr2.4	mRNA	6922751	6924878	6922751	ID=MS.gene31177.t1;Parent=MS.gene31177
chr2.4	exon	6924863	6924878	6924863	ID=MS.gene31177.t1.exon1;Parent=MS.gene31177.t1
chr2.4	CDS	6924863	6924878	6924863	ID=cds.MS.gene31177.t1;Parent=MS.gene31177.t1
chr2.4	exon	6923125	6923488	6923125	ID=MS.gene31177.t1.exon2;Parent=MS.gene31177.t1
chr2.4	CDS	6923125	6923488	6923125	ID=cds.MS.gene31177.t1;Parent=MS.gene31177.t1
chr2.4	exon	6922751	6922835	6922751	ID=MS.gene31177.t1.exon3;Parent=MS.gene31177.t1
chr2.4	CDS	6922751	6922835	6922751	ID=cds.MS.gene31177.t1;Parent=MS.gene31177.t1

Gene Sequence

>MS.gene31177

ATGGCTCCACCAAAAGGTATTTCATCTATCCTTCTTTTCTTTTTCAATAGTCGAAGATATGTTTTTGCTCTTTAATTATTCCAATTTCTGCATCTGTTTTCATAATGTAACTGCTTAAGCACGAAAATCACTGCTTGCACGAGTTTCTGGATTAAATATTGGTTTATCTACACGGTTGATTTTAATAATCTGTGTTTTTGTGCCGGTAGATTTGATTCGAGTAGAAAATTCACTAGTTGTATCCTTAATGCCAGCTAAAATTGCTATATAATCTCATTTTTATGTTATGGTTCATTTTTTTTACTAGTTAACTACTAAGAGCTGACTTCTAACTTATGAAAAGCAGAAAACAGCTTATGAGATTGTTCATAAGCTGTTTTCAGTTTTCTTTTCTAAGTTCTCCAAAATTGATTCTGAAAATAACGTATAGCTTATATGAAACCAATTTAGATCTTTTGCTATATAAATAGTTTTAGTAGAACTTAAAATTTTATAGGCTGCAAATAAGCTGTGTATCTGAACCTTATTTGTTTGCTATTCCCGCATTCTCATTTCTTTATTATTTCAACAGAGATTGAAATTTGATAATTGTCATTAGACTGTCTGAGTACTGACCTCGAAAGCAATAATCATGGAGATAAATCAAGTTCGTCTCCATTTTAACAAAACCAAAATAAGACCAAGCAAATCATGTTCCAGCAATTTTTTTAATCAAAACAGCAAATTTACATATCATTCTCAACTCAAACATCTCAAGTTCACATATCACTAAAAGTCGTTTTAAGTGATTATGTGAAATAATACATTTTGATGATTGAACTTGAGATATTTGAGTTTAAAATGATATGTTAATTTGCTGTTTTGATTAAAAAAGTTGCTGGAACATGATTTGCTTGGACTTATTTTGGTTTTGTTAAAATGGAGACGAACTTGATTTATCTCCATGATTATTGCTTTCGGTGTTTAGAGTCATCCCATTTCTCTGGATGCTTCATTTTTCTGGGATATATGAAATTAATGATATCTTTTTGTTGAATAGAAGATTTAGGACCTTTTTGGATTGGCTTCTTTCAGCTTATCTACCGGCATTTGTTTTGTGAGACTGTTTGGGAAAAGCTTATGACTTTTTTCATAAGCATTTTTCAACTTGTTTTTATTAGTTCCCCCAACGTAACTCGTGGAAACATCTTATATCATATACACAGTTTTAACTTTATTTTCCCATTTGCACAAGAATAGCTTATGTAAGCGCTTATACATAAACACGTGTGTGCTATAAGCTGCAAATAAGTTGTTTATCCAAACAGGACCTTTTATGTATACAAAATAGCTAGCTATTAGATTTTTTTGCTGCATGAAATGTGACTAGGTCATCTTTTTCTTTTTGTAGGTGATGGTGCAAAGAAGACCGATCCAAAGGCACAGGCCTTGAAAGCTGCGAAAGCAGTGAAGTCAGGCACTGCCATCAAGAAGAAGGCAAAGAAGATCAGGACAACTGTTACATTCCACAGGCCAAAGACTTTATCTAGGGATAGGAATCCAAAATACCCTCGGATTAGTGCTACACCAAGGAACAAACTTGATCATTATCAGATTTTGAAGTATCCGCTCACAACTGAGTCAGCAATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACTTGCGAGCTGACAAAAAGAAAATCAAGGATGCCGTGAAGAAAATGTACGACATCCAGGCCAAGAAAGTTAACACCTTGATCAGGTAAGCCTTTAGGTTGTGATCTTTTTTGCAAATTTGTTCAGTAATTCATGGTTGCTTAAGACTTGTTGAGTTGAATGCTGGCTGTTAATTTTGTATTGCAATTTAAACACACTAGCTTATACTGTAGTAATAACATGTACATACACTGGTTTTTATGGCACACTGTTATGCTCACGGGCCCTATTGTGAAGGGATATGATACATAATATAAACCCATTGTAAATAATAACATGAGATTGAAACCCACATTATTGTAAAGCAGTTTAAAACTTTGCATGTTTTCTTGCAGGCCCGATGGCACCAAGAAGGCCTATGTAAGGTTGACACCTGATTATGATGCTTTGGATGTTGCAAACAAGATTGGGATTATTTAA

Protein sequence

>MS.gene31177.t1

MAPPKGDGAKKTDPKAQALKAAKAVKSGTAIKKKAKKIRTTVTFHRPKTLSRDRNPKYPRISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII