AlfalfaGEDB | MS.gene45470

M. sativa cultivar XinJiangDaYe / MS.gene45470

KEGG: K02893
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00276.23 PF03939.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45470.t1	XP_003597322.1	100	154	0	0	1	154	1	154	5.70E-76	293.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45470.t1	Q9AT35	87.0	154	20	0	1	154	1	154	1.6e-66	253.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45470.t1	B7FGR0	100.0	154	0	0	1	154	1	154	4.1e-76	293.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050290	MS.gene45470	0.856599	2.88E-62	-1.69E-46
MS.gene050791	MS.gene45470	0.824571	7.51E-54	-1.69E-46
MS.gene050916	MS.gene45470	0.81304	3.13E-51	-1.69E-46
MS.gene053148	MS.gene45470	0.802551	5.32E-49	-1.69E-46
MS.gene054937	MS.gene45470	0.835869	1.31E-56	-1.69E-46
MS.gene056075	MS.gene45470	0.813187	2.91E-51	-1.69E-46
MS.gene056917	MS.gene45470	0.890168	1.26E-73	-1.69E-46
MS.gene056978	MS.gene45470	0.805175	1.52E-49	-1.69E-46
MS.gene057092	MS.gene45470	0.804224	2.39E-49	-1.69E-46
MS.gene058354	MS.gene45470	0.81408	1.85E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene032493	MS.gene45470	PPI
MS.gene59485	MS.gene45470	PPI
MS.gene75537	MS.gene45470	PPI
MS.gene031378	MS.gene45470	PPI
MS.gene44230	MS.gene45470	PPI
MS.gene028609	MS.gene45470	PPI
MS.gene45470	MS.gene31177	PPI
MS.gene31177	MS.gene45470	PPI
MS.gene47347	MS.gene45470	PPI
MS.gene53720	MS.gene45470	PPI
MS.gene30933	MS.gene45470	PPI
MS.gene67460	MS.gene45470	PPI
MS.gene066301	MS.gene45470	PPI
MS.gene45470	MS.gene067072	PPI
MS.gene62620	MS.gene45470	PPI
MS.gene64512	MS.gene45470	PPI
MS.gene000480	MS.gene45470	PPI
MS.gene012127	MS.gene45470	PPI
MS.gene061428	MS.gene45470	PPI
MS.gene90360	MS.gene45470	PPI
MS.gene95889	MS.gene45470	PPI
MS.gene061905	MS.gene45470	PPI
MS.gene045180	MS.gene45470	PPI
MS.gene020215	MS.gene45470	PPI
MS.gene64789	MS.gene45470	PPI
MS.gene91058	MS.gene45470	PPI
MS.gene066348	MS.gene45470	PPI
MS.gene035396	MS.gene45470	PPI
MS.gene040151	MS.gene45470	PPI
MS.gene021058	MS.gene45470	PPI
MS.gene017622	MS.gene45470	PPI
MS.gene89672	MS.gene45470	PPI
MS.gene68079	MS.gene45470	PPI
MS.gene034931	MS.gene45470	PPI
MS.gene059880	MS.gene45470	PPI
MS.gene004091	MS.gene45470	PPI
MS.gene45470	MS.gene93783	PPI
MS.gene069038	MS.gene45470	PPI
MS.gene037902	MS.gene45470	PPI
MS.gene77392	MS.gene45470	PPI
MS.gene43350	MS.gene45470	PPI
MS.gene95644	MS.gene45470	PPI
MS.gene45470	MS.gene061428	PPI
MS.gene09845	MS.gene45470	PPI
MS.gene67365	MS.gene45470	PPI
MS.gene022752	MS.gene45470	PPI
MS.gene018553	MS.gene45470	PPI
MS.gene99779	MS.gene45470	PPI
MS.gene066300	MS.gene45470	PPI
MS.gene39294	MS.gene45470	PPI
MS.gene060923	MS.gene45470	PPI
MS.gene45646	MS.gene45470	PPI
MS.gene041623	MS.gene45470	PPI
MS.gene41329	MS.gene45470	PPI
MS.gene059878	MS.gene45470	PPI
MS.gene61130	MS.gene45470	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45470.t1	MTR_2g096340	100.000	154	0	0	1	154	1	154	4.16e-107	302
MS.gene45470.t1	MTR_2g096340	95.652	161	0	1	1	154	1	161	2.58e-104	295
MS.gene45470.t1	MTR_4g063060	95.364	151	6	1	4	154	3	152	5.31e-81	236
MS.gene45470.t1	MTR_7g023260	93.506	154	10	0	1	154	1	154	4.51e-71	211
MS.gene45470.t1	MTR_4g007840	94.595	37	2	0	118	154	36	72	2.49e-18	74.7

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45470.t1	AT3G55280	87.662	154	19	1	154	1	154	1.82e-71	212
MS.gene45470.t1	AT3G55280	87.662	154	19	1	154	1	154	1.82e-71	212
MS.gene45470.t1	AT2G39460	87.662	154	19	1	154	1	154	2.93e-68	204
MS.gene45470.t1	AT2G39460	87.662	154	19	1	154	1	154	2.93e-68	204
MS.gene45470.t1	AT3G55280	93.220	118	8	37	154	31	148	4.43e-67	201

Find 40 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACAAGATTGGGATTATTTA+AGG	0.136899	2.1:-7107623	None:intergenic
CTTCTTTGCCTTCTTCTTGA+TGG	0.213233	2.1:+7108268	None:intergenic
GCACTAATCCGAGGGTATTT+TGG	0.229197	2.1:+7108191	None:intergenic
GATCAAGGTGTTAACTTTCT+TGG	0.259114	2.1:+7108001	None:intergenic
CAACCTTACATAGGCCTTCT+TGG	0.259824	2.1:+7107676	None:intergenic
GCTTTCAAGGCCTGTGCCTT+TGG	0.317092	2.1:+7108317	None:intergenic
CTATCCCTAGATAAAGTCTT+TGG	0.341250	2.1:+7108218	None:intergenic
CACTGCTTTCGCAGCTTTCA+AGG	0.343655	2.1:+7108304	None:intergenic
ACAGGCCAAAGACTTTATCT+AGG	0.384705	2.1:-7108223	MS.gene45470:CDS
GACACCTGATTATGATGCTT+TGG	0.412386	2.1:-7107654	MS.gene45470:CDS
TTGGATGTTGCAAACAAGAT+TGG	0.413392	2.1:-7107635	MS.gene45470:CDS
TGGATGTTGCAAACAAGATT+GGG	0.427718	2.1:-7107634	MS.gene45470:CDS
ATAGGCCTTCTTGGTGCCAT+CGG	0.428001	2.1:+7107685	None:intergenic
AGAAGAAGGCAAAGAAGATC+AGG	0.439428	2.1:-7108262	MS.gene45470:CDS
CAAGGCCTGTGCCTTTGGAT+CGG	0.452797	2.1:+7108322	None:intergenic
AGGTGTTAACTTTCTTGGCC+TGG	0.453520	2.1:+7108006	None:intergenic
ACATCCAAAGCATCATAATC+AGG	0.461568	2.1:+7107650	None:intergenic
GCTGCGAAAGCAGTGAAGTC+AGG	0.467790	2.1:-7108296	MS.gene45470:CDS
TAGGCCTTCTTGGTGCCATC+GGG	0.494781	2.1:+7107686	None:intergenic
TAATGATCAAGTTTGTTCCT+TGG	0.498760	2.1:+7108164	None:intergenic
GATTCAATGGCTCCACCAAA+AGG	0.506159	2.1:-7109748	None:intergenic
AGAAAGTTAACACCTTGATC+AGG	0.514403	2.1:-7107998	MS.gene45470:intron
GATTGAAGACAACAACACTT+TGG	0.518542	2.1:-7108096	MS.gene45470:CDS
CAAAGACTTTATCTAGGGAT+AGG	0.519733	2.1:-7108217	MS.gene45470:CDS
GAAGAAAATGTACGACATCC+AGG	0.525002	2.1:-7108024	MS.gene45470:CDS
CCTAAAGGCTTACCTGATCA+AGG	0.532987	2.1:+7107986	None:intergenic
CAGGCCCGATGGCACCAAGA+AGG	0.551305	2.1:-7107690	MS.gene45470:CDS
GCACCAAGAAGGCCTATGTA+AGG	0.556146	2.1:-7107679	MS.gene45470:CDS
AGGCACTGCCATCAAGAAGA+AGG	0.565573	2.1:-7108276	MS.gene45470:CDS
CAGGCCAAAGACTTTATCTA+GGG	0.565675	2.1:-7108222	MS.gene45470:CDS
GAAGACCGATCCAAAGGCAC+AGG	0.567558	2.1:-7108327	MS.gene45470:CDS
TAGATAAAGTCTTTGGCCTG+TGG	0.590574	2.1:+7108225	None:intergenic
GGACAACTGTTACATTCCAC+AGG	0.605601	2.1:-7108241	MS.gene45470:CDS
TGCAAAGAAGACCGATCCAA+AGG	0.612710	2.1:-7108333	MS.gene45470:CDS
ATAGGAATCCAAAATACCCT+CGG	0.629797	2.1:-7108199	MS.gene45470:CDS
ATCAGGTGTCAACCTTACAT+AGG	0.633043	2.1:+7107667	None:intergenic
ATTGCTGACTCAGTTGTGAG+CGG	0.651573	2.1:+7108125	None:intergenic
TTGGTGTAGCACTAATCCGA+GGG	0.658734	2.1:+7108183	None:intergenic
CTTGGTGTAGCACTAATCCG+AGG	0.662347	2.1:+7108182	None:intergenic
CTCGGATTAGTGCTACACCA+AGG	0.713270	2.1:-7108181	MS.gene45470:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTAGAACTTAAAATTTTAT+AGG	-	chr2.1:7108099-7108118	MS.gene45470:CDS	15.0%
!!!	ATAATCTCATTTTTATGTTA+TGG	-	chr2.1:7107892-7107911	MS.gene45470:intron	15.0%
!!!	TTATTTTGGTTTTGTTAAAA+TGG	-	chr2.1:7108524-7108543	MS.gene45470:intron	15.0%
!!!	TTATTTTGGTTTTGTTAAAA+TGG	+	chr2.1:7108543-7108524	None:intergenic	15.0%
!!	ATAATAAAGAAATGAGAATG+CGG	+	chr2.1:7108168-7108187	None:intergenic	20.0%
!!	ATATAGCAAAAGATCTAAAT+TGG	+	chr2.1:7108069-7108088	None:intergenic	20.0%
!!	CTCATGTTATTATTTACAAT+GGG	+	chr2.1:7109606-7109625	None:intergenic	20.0%
!!	TCTCATGTTATTATTTACAA+TGG	+	chr2.1:7109607-7109626	None:intergenic	20.0%
!!!	AGCTATTTTGTATACATAAA+AGG	+	chr2.1:7108949-7108968	None:intergenic	20.0%
!!!	GTTATTTTCAGAATCAATTT+TGG	+	chr2.1:7108029-7108048	None:intergenic	20.0%
!!!	GTTTTGATTAAAAAAATTGC+TGG	+	chr2.1:7108323-7108342	None:intergenic	20.0%
!!!	TAAATATTGGTTTATCTACA+CGG	-	chr2.1:7107777-7107796	MS.gene45470:intron	20.0%
!!!	TTTTGTTGAATAGAAGATTT+AGG	-	chr2.1:7108651-7108670	MS.gene45470:intron	20.0%
!	AAACTGCTTTACAATAATGT+GGG	+	chr2.1:7109636-7109655	None:intergenic	25.0%
!	AATAAGTTGTTTATCCAAAC+AGG	-	chr2.1:7108922-7108941	MS.gene45470:intron	25.0%
!	GACTATTGAAAAAGAAAAGA+AGG	+	chr2.1:7107657-7107676	None:intergenic	25.0%
!	TAAACTGCTTTACAATAATG+TGG	+	chr2.1:7109637-7109656	None:intergenic	25.0%
!	TAATAAAGAAATGAGAATGC+GGG	+	chr2.1:7108167-7108186	None:intergenic	25.0%
!!	CAAATTTGTTCAGTAATTCA+TGG	-	chr2.1:7109419-7109438	MS.gene45470:intron	25.0%
!!!	GATTATATAGCAATTTTAGC+TGG	+	chr2.1:7107878-7107897	None:intergenic	25.0%
!!!	GTTTTGATTAAAAAAGTTGC+TGG	-	chr2.1:7108483-7108502	MS.gene45470:intron	25.0%
	AGCTGACAAAAAGAAAATCA+AGG	-	chr2.1:7109313-7109332	MS.gene45470:intron	30.0%
	ATAAGCTATTCTTGTGCAAA+TGG	+	chr2.1:7108861-7108880	None:intergenic	30.0%
	ATCTCCATGATTATTGCTTT+CGG	-	chr2.1:7108562-7108581	MS.gene45470:intron	30.0%
	ATGAAAACAGATGCAGAAAT+TGG	+	chr2.1:7107708-7107727	None:intergenic	30.0%
	CAAAAAAGATCACAACCTAA+AGG	+	chr2.1:7109399-7109418	None:intergenic	30.0%
	GTAATAACATGTACATACAC+TGG	-	chr2.1:7109517-7109536	MS.gene45470:intron	30.0%
	TAAGCTATTCTTGTGCAAAT+GGG	+	chr2.1:7108860-7108879	None:intergenic	30.0%
	TATACATAAAAGGTCCTGTT+TGG	+	chr2.1:7108939-7108958	None:intergenic	30.0%
	TATCATATCCCTTCACAATA+GGG	+	chr2.1:7109572-7109591	None:intergenic	30.0%
!	AGGATAGATGAAATACCTTT+TGG	+	chr2.1:7107637-7107656	None:intergenic	30.0%
!	ATAGATGAAATACCTTTTGG+TGG	+	chr2.1:7107634-7107653	None:intergenic	30.0%
!	CGAGTTTCTGGATTAAATAT+TGG	-	chr2.1:7107764-7107783	MS.gene45470:intron	30.0%
!	CTTTTTCTTTTTGTAGGTGA+TGG	-	chr2.1:7109011-7109030	MS.gene45470:intron	30.0%
!	GGTCATCTTTTTCTTTTTGT+AGG	-	chr2.1:7109005-7109024	MS.gene45470:intron	30.0%
!	TAATGATCAAGTTTGTTCCT+TGG	+	chr2.1:7109206-7109225	None:intergenic	30.0%
!!	AATAATCTGTGTTTTTGTGC+CGG	-	chr2.1:7107808-7107827	MS.gene45470:intron	30.0%
!!	TAGAAGATTTAGGACCTTTT+TGG	-	chr2.1:7108661-7108680	MS.gene45470:intron	30.0%
!!!	ATTTGTTTTGTGAGACTGTT+TGG	-	chr2.1:7108712-7108731	MS.gene45470:intron	30.0%
!!!	TGATTTGCTTGGACTTATTT+TGG	-	chr2.1:7108510-7108529	MS.gene45470:intron	30.0%
!!!	TGATTTGCTTGGTCTTATTT+TGG	+	chr2.1:7108296-7108315	None:intergenic	30.0%
!!!	TGTACATACACTGGTTTTTA+TGG	-	chr2.1:7109526-7109545	MS.gene45470:intron	30.0%
!!!	TTTGTTTTGTGAGACTGTTT+GGG	-	chr2.1:7108713-7108732	MS.gene45470:intron	30.0%
	AACACCGAAAGCAATAATCA+TGG	+	chr2.1:7108569-7108588	None:intergenic	35.0%
	AGAAAGTTAACACCTTGATC+AGG	-	chr2.1:7109369-7109388	MS.gene45470:intron	35.0%
	ATAGGAATCCAAAATACCCT+CGG	-	chr2.1:7109168-7109187	MS.gene45470:intron	35.0%
	CAAAGACTTTATCTAGGGAT+AGG	-	chr2.1:7109150-7109169	MS.gene45470:intron	35.0%
	CTATCCCTAGATAAAGTCTT+TGG	+	chr2.1:7109152-7109171	None:intergenic	35.0%
	GATTGAAGACAACAACACTT+TGG	-	chr2.1:7109271-7109290	MS.gene45470:intron	35.0%
	GTATCATATCCCTTCACAAT+AGG	+	chr2.1:7109573-7109592	None:intergenic	35.0%
	TCTACTCGAATCAAATCTAC+CGG	+	chr2.1:7107830-7107849	None:intergenic	35.0%
	TGAAAGAAGCCAATCCAAAA+AGG	+	chr2.1:7108678-7108697	None:intergenic	35.0%
	TGGATGTTGCAAACAAGATT+GGG	-	chr2.1:7109733-7109752	MS.gene45470:intron	35.0%
	TTGGATGTTGCAAACAAGAT+TGG	-	chr2.1:7109732-7109751	MS.gene45470:intron	35.0%
!	AAATGAAGCATCCAGAGAAA+TGG	+	chr2.1:7108602-7108621	None:intergenic	35.0%
!	AACTTTGCATGTTTTCTTGC+AGG	-	chr2.1:7109658-7109677	MS.gene45470:intron	35.0%
!	AATGAAGCATCCAGAGAAAT+GGG	+	chr2.1:7108601-7108620	None:intergenic	35.0%
!	ACATCCAAAGCATCATAATC+AGG	+	chr2.1:7109720-7109739	None:intergenic	35.0%
!	AGACTGTTTGGGAAAAGTTT+TGG	-	chr2.1:7108724-7108743	MS.gene45470:intron	35.0%
!	GACTGTTTGGGAAAAGTTTT+GGG	-	chr2.1:7108725-7108744	MS.gene45470:intron	35.0%
!	GATCAAGGTGTTAACTTTCT+TGG	+	chr2.1:7109369-7109388	None:intergenic	35.0%
!	GATGTCGTACATTTTCTTCA+CGG	+	chr2.1:7109342-7109361	None:intergenic	35.0%
!!	GATTTAGGACCTTTTTGGAT+TGG	-	chr2.1:7108666-7108685	MS.gene45470:intron	35.0%
!!	TCTGGATGCTTCATTTTTCT+GGG	-	chr2.1:7108606-7108625	MS.gene45470:intron	35.0%
!!!	AGCAATTTTAGCTGGCATTA+AGG	+	chr2.1:7107870-7107889	None:intergenic	35.0%
	ACAGGCCAAAGACTTTATCT+AGG	-	chr2.1:7109144-7109163	MS.gene45470:intron	40.0%
	AGAAGAAGGCAAAGAAGATC+AGG	-	chr2.1:7109105-7109124	MS.gene45470:intron	40.0%
	ATCAGGTGTCAACCTTACAT+AGG	+	chr2.1:7109703-7109722	None:intergenic	40.0%
	ATGTTTCCACGAGTTACGTT+GGG	+	chr2.1:7108804-7108823	None:intergenic	40.0%
	CAGGCCAAAGACTTTATCTA+GGG	-	chr2.1:7109145-7109164	MS.gene45470:intron	40.0%
	CAGTCTCACAAAACAAATGC+CGG	+	chr2.1:7108710-7108729	None:intergenic	40.0%
	CTCCATGATTATTGCTTTCG+AGG	+	chr2.1:7108583-7108564	None:intergenic	40.0%
	CTTCTTTGCCTTCTTCTTGA+TGG	+	chr2.1:7109102-7109121	None:intergenic	40.0%
	GAAGAAAATGTACGACATCC+AGG	-	chr2.1:7109343-7109362	MS.gene45470:intron	40.0%
	GACACCTGATTATGATGCTT+TGG	-	chr2.1:7109713-7109732	MS.gene45470:intron	40.0%
	GACCTCGAAAGCAATAATCA+TGG	-	chr2.1:7108237-7108256	MS.gene45470:CDS	40.0%
	GCGGGAATAGCAAACAAATA+AGG	+	chr2.1:7108149-7108168	None:intergenic	40.0%
	GCTTCTTTCAGCTTATCTAC+CGG	-	chr2.1:7108688-7108707	MS.gene45470:intron	40.0%
	TAGATAAAGTCTTTGGCCTG+TGG	+	chr2.1:7109145-7109164	None:intergenic	40.0%
	TTAGAGTCATCCCATTTCTC+TGG	-	chr2.1:7108588-7108607	MS.gene45470:intron	40.0%
	TTGCTGCATGAAATGTGACT+AGG	-	chr2.1:7108984-7109003	MS.gene45470:intron	40.0%
!!	AGACTTGTTGAGTTGAATGC+TGG	-	chr2.1:7109449-7109468	MS.gene45470:intron	40.0%
!!	CTCTGGATGCTTCATTTTTC+TGG	-	chr2.1:7108605-7108624	MS.gene45470:intron	40.0%
!!	TTGCTGGAACATGATTTGCT+TGG	-	chr2.1:7108499-7108518	MS.gene45470:intron	40.0%
!!	TTGCTGGAACATGATTTGCT+TGG	+	chr2.1:7108518-7108499	None:intergenic	40.0%
	AGGTGTTAACTTTCTTGGCC+TGG	+	chr2.1:7109364-7109383	None:intergenic	45.0%
	ATGGCACACTGTTATGCTCA+CGG	-	chr2.1:7109545-7109564	MS.gene45470:intron	45.0%
	CAACCTTACATAGGCCTTCT+TGG	+	chr2.1:7109694-7109713	None:intergenic	45.0%
	CCTAAAGGCTTACCTGATCA+AGG	+	chr2.1:7109384-7109403	None:intergenic	45.0%
	CCTTGATCAGGTAAGCCTTT+AGG	-	chr2.1:7109381-7109400	MS.gene45470:intron	45.0%
	GATGTTTCCACGAGTTACGT+TGG	+	chr2.1:7108805-7108824	None:intergenic	45.0%
	GGACAACTGTTACATTCCAC+AGG	-	chr2.1:7109126-7109145	MS.gene45470:intron	45.0%
	TGCAAAGAAGACCGATCCAA+AGG	-	chr2.1:7109034-7109053	MS.gene45470:intron	45.0%
	TGTTTCCACGAGTTACGTTG+GGG	+	chr2.1:7108803-7108822	None:intergenic	45.0%
	TTGGTGTAGCACTAATCCGA+GGG	+	chr2.1:7109187-7109206	None:intergenic	45.0%
!!	ATTGCTGACTCAGTTGTGAG+CGG	+	chr2.1:7109245-7109264	None:intergenic	45.0%
!!!	GCACTAATCCGAGGGTATTT+TGG	+	chr2.1:7109179-7109198	None:intergenic	45.0%
	CACTGCTTTCGCAGCTTTCA+AGG	+	chr2.1:7109066-7109085	None:intergenic	50.0%
	GCACCAAGAAGGCCTATGTA+AGG	-	chr2.1:7109688-7109707	MS.gene45470:intron	50.0%
	GTTTCCACGAGTTACGTTGG+GGG	+	chr2.1:7108802-7108821	None:intergenic	50.0%
	TCACTGCTTGCACGAGTTTC+TGG	-	chr2.1:7107752-7107771	MS.gene45470:intron	50.0%
	TGGCACACTGTTATGCTCAC+GGG	-	chr2.1:7109546-7109565	MS.gene45470:intron	50.0%
!	AGGCACTGCCATCAAGAAGA+AGG	-	chr2.1:7109091-7109110	MS.gene45470:intron	50.0%
!	ATGTTTTCTTGCAGGCCCGA+TGG	-	chr2.1:7109666-7109685	MS.gene45470:intron	50.0%
!	CTTGGTGTAGCACTAATCCG+AGG	+	chr2.1:7109188-7109207	None:intergenic	50.0%
!!	ATAGGCCTTCTTGGTGCCAT+CGG	+	chr2.1:7109685-7109704	None:intergenic	50.0%
!!	CTCGGATTAGTGCTACACCA+AGG	-	chr2.1:7109186-7109205	MS.gene45470:intron	50.0%
	AGTTCCCCCAACGTAACTCG+TGG	-	chr2.1:7108795-7108814	MS.gene45470:intron	55.0%
	CAAGGCCTGTGCCTTTGGAT+CGG	+	chr2.1:7109048-7109067	None:intergenic	55.0%
	CTCACGGGCCCTATTGTGAA+GGG	-	chr2.1:7109561-7109580	MS.gene45470:intron	55.0%
	GCTGCGAAAGCAGTGAAGTC+AGG	-	chr2.1:7109071-7109090	MS.gene45470:intron	55.0%
	GCTTTCAAGGCCTGTGCCTT+TGG	+	chr2.1:7109053-7109072	None:intergenic	55.0%
!	GAAGACCGATCCAAAGGCAC+AGG	-	chr2.1:7109040-7109059	MS.gene45470:intron	55.0%
!!	TAGGCCTTCTTGGTGCCATC+GGG	+	chr2.1:7109684-7109703	None:intergenic	55.0%
	GCTCACGGGCCCTATTGTGA+AGG	-	chr2.1:7109560-7109579	MS.gene45470:intron	60.0%
	CAGGCCCGATGGCACCAAGA+AGG	-	chr2.1:7109677-7109696	MS.gene45470:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	7107625	7109764	7107625	ID=MS.gene45470
chr2.1	mRNA	7107625	7109764	7107625	ID=MS.gene45470.t1;Parent=MS.gene45470
chr2.1	exon	7109749	7109764	7109749	ID=MS.gene45470.t1.exon1;Parent=MS.gene45470.t1
chr2.1	CDS	7109749	7109764	7109749	ID=cds.MS.gene45470.t1;Parent=MS.gene45470.t1
chr2.1	exon	7107999	7108362	7107999	ID=MS.gene45470.t1.exon2;Parent=MS.gene45470.t1
chr2.1	CDS	7107999	7108362	7107999	ID=cds.MS.gene45470.t1;Parent=MS.gene45470.t1
chr2.1	exon	7107625	7107709	7107625	ID=MS.gene45470.t1.exon3;Parent=MS.gene45470.t1
chr2.1	CDS	7107625	7107709	7107625	ID=cds.MS.gene45470.t1;Parent=MS.gene45470.t1

Gene Sequence

>MS.gene45470

ATGGCTCCACCAAAAGGTATTTCATCTATCCTTCTTTTCTTTTTCAATAGTCGAAGATATGTTTTTGCTCTTTAATTATTCCAATTTCTGCATCTGTTTTCATAATGTAACTGCTTAAGCACGAAAATCACTGCTTGCACGAGTTTCTGGATTAAATATTGGTTTATCTACACGGTTGATTTTAATAATCTGTGTTTTTGTGCCGGTAGATTTGATTCGAGTAGAAAATTCACTAGTTGTATCCTTAATGCCAGCTAAAATTGCTATATAATCTCATTTTTATGTTATGGTTCATTTTTTTTACTAGTTAACTACTAAGAGCTGACTTCTAACTTATGAAAAGCAGAAAACAGCTTATGAGATTGTTCATAAGCTGTTTTCAGTTTTCTTTTCTAAGTTCTCCAAAATTGATTCTGAAAATAACGTATAGCTTATATGAAACCAATTTAGATCTTTTGCTATATAAATAGTTTTAGTAGAACTTAAAATTTTATAGGCTGCAAATAAGCTGTGTATCTGAACCTTATTTGTTTGCTATTCCCGCATTCTCATTTCTTTATTATTTTAACAGAGATTGAAATTTGATAATTGTCATTAGACTGTCTGAGTACTGACCTCGAAAGCAATAATCATGGAGATAAATCAAGTTCGTCTCCATTTTAACAAAACCAAAATAAGACCAAGCAAATCATGTTCCAGCAATTTTTTTAATCAAAACAGCAAATTTACATATCATTCTCAACTCAAACATCTCAAGTTCACATATCACTAAAAGTCGTTTTAAGTGATTATGTGAAATAATACATTTTGATGATTGAACTTGAGATATTTGAGTTTAAAATGATATGTTAATTTGCTGTTTTGATTAAAAAAGTTGCTGGAACATGATTTGCTTGGACTTATTTTGGTTTTGTTAAAATGGAGACGAACTTGATTTATCTCCATGATTATTGCTTTCGGTGTTTAGAGTCATCCCATTTCTCTGGATGCTTCATTTTTCTGGGATATATGAAATTAATGATATCTTTTTGTTGAATAGAAGATTTAGGACCTTTTTGGATTGGCTTCTTTCAGCTTATCTACCGGCATTTGTTTTGTGAGACTGTTTGGGAAAAGTTTTGGGAAAAGCTTATGACTTTTTTCATAAGCATTTTTCAACTTGTTTTTATTAGTTCCCCCAACGTAACTCGTGGAAACATCTTATATCATATACACAGTTTTAACTTTATTTTCCCATTTGCACAAGAATAGCTTATGTAAGCGCTTATACATAAACACGTGTGTGCTATAAGCTGCAAATAAGTTGTTTATCCAAACAGGACCTTTTATGTATACAAAATAGCTAGCTATTAGATTTTTTTGCTGCATGAAATGTGACTAGGTCATCTTTTTCTTTTTGTAGGTGATGGTGCAAAGAAGACCGATCCAAAGGCACAGGCCTTGAAAGCTGCGAAAGCAGTGAAGTCAGGCACTGCCATCAAGAAGAAGGCAAAGAAGATCAGGACAACTGTTACATTCCACAGGCCAAAGACTTTATCTAGGGATAGGAATCCAAAATACCCTCGGATTAGTGCTACACCAAGGAACAAACTTGATCATTATCAGATTTTGAAGTATCCGCTCACAACTGAGTCAGCAATGAAGAAGATTGAAGACAACAACACTTTGGTTTTCATTGTTGACTTGCGAGCTGACAAAAAGAAAATCAAGGATGCCGTGAAGAAAATGTACGACATCCAGGCCAAGAAAGTTAACACCTTGATCAGGTAAGCCTTTAGGTTGTGATCTTTTTTGCAAATTTGTTCAGTAATTCATGGTTGCTTAAGACTTGTTGAGTTGAATGCTGGCTGTTAATTTTGTATTGCAATTTAAACACACTAGCTTATACTGTAGTAATAACATGTACATACACTGGTTTTTATGGCACACTGTTATGCTCACGGGCCCTATTGTGAAGGGATATGATACATAATATAAACCCATTGTAAATAATAACATGAGATTGAAACCCACATTATTGTAAAGCAGTTTAAAACTTTGCATGTTTTCTTGCAGGCCCGATGGCACCAAGAAGGCCTATGTAAGGTTGACACCTGATTATGATGCTTTGGATGTTGCAAACAAGATTGGGATTATTTAA

Protein sequence

>MS.gene45470.t1

MAPPKGDGAKKTDPKAQALKAAKAVKSGTAIKKKAKKIRTTVTFHRPKTLSRDRNPKYPRISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII