Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45331.t1 | XP_013455569.1 | 98.7 | 303 | 3 | 1 | 1 | 302 | 1 | 303 | 3.70E-156 | 560.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45331.t1 | Q7XAB8 | 71.1 | 298 | 78 | 5 | 1 | 297 | 1 | 291 | 1.6e-107 | 390.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45331.t1 | A0A072UUQ2 | 98.7 | 303 | 3 | 1 | 1 | 302 | 1 | 303 | 2.7e-156 | 560.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene45331 | 0.80416 | 2.47E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene45331 | 0.83749 | 5.04E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene45331 | 0.800677 | 1.29E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene45331 | 0.808545 | 2.94E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene45331 | 0.826078 | 3.30E-54 | -1.69E-46 |
| MS.gene049615 | MS.gene45331 | 0.814393 | 1.58E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene45331 | 0.802437 | 5.61E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene45331 | 0.806492 | 8.01E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene45331 | 0.827275 | 1.71E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene45331 | 0.804406 | 2.19E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene45331 | 0.806715 | 7.19E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene45331 | 0.830626 | 2.64E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene45331 | 0.810469 | 1.14E-50 | -1.69E-46 |
| MS.gene050781 | MS.gene45331 | 0.838098 | 3.52E-57 | -1.69E-46 |
| MS.gene050783 | MS.gene45331 | 0.831851 | 1.32E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene45331 | 0.825099 | 5.64E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene45331 | 0.808301 | 3.31E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene45331 | 0.802923 | 4.46E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene45331 | 0.839676 | 1.37E-57 | -1.69E-46 |
| MS.gene051692 | MS.gene45331 | 0.801807 | 7.56E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene45331 | 0.80744 | 5.05E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene45331 | 0.80569 | 1.18E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene45331 | 0.816232 | 6.15E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene45331 | 0.827631 | 1.41E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene45331 | 0.804556 | 2.04E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene45331 | 0.815611 | 8.46E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene45331 | 0.801127 | 1.04E-48 | -1.69E-46 |
| MS.gene052825 | MS.gene45331 | 0.802792 | 4.74E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene45331 | 0.809809 | 1.57E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene45331 | 0.80984 | 1.55E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene45331 | 0.839821 | 1.26E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene45331 | 0.829305 | 5.55E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene45331 | 0.806807 | 6.88E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene45331 | 0.833309 | 5.74E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene45331 | 0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene45331 | 0.838526 | 2.73E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene45331 | 0.803591 | 3.24E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene45331 | 0.80429 | 2.32E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene45331 | 0.806333 | 8.65E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene45331 | 0.802493 | 5.46E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene45331 | 0.804871 | 1.75E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene45331 | 0.81984 | 9.40E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene45331 | 0.80051 | 1.39E-48 | -1.69E-46 |
| MS.gene056083 | MS.gene45331 | 0.829865 | 4.05E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene45331 | 0.803952 | 2.73E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene45331 | 0.807288 | 5.44E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene45331 | 0.828473 | 8.82E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene45331 | 0.832723 | 8.03E-56 | -1.69E-46 |
| MS.gene057658 | MS.gene45331 | 0.803916 | 2.77E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene45331 | 0.817342 | 3.47E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene45331 | 0.85334 | 2.55E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene45331 | 0.807253 | 5.53E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene45331 | 0.81174 | 6.02E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene45331 | 0.826709 | 2.34E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene45331 | 0.835175 | 1.96E-56 | -1.69E-46 |
| MS.gene059455 | MS.gene45331 | 0.810146 | 1.33E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene45331 | 0.817557 | 3.10E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene45331 | 0.818547 | 1.85E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene45331 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene45331 | 0.838374 | 2.99E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene45331 | 0.814536 | 1.47E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene45331 | 0.808561 | 2.92E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene45331 | 0.819487 | 1.13E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45331 | MS.gene30964 | PPI |
| MS.gene050301 | MS.gene45331 | PPI |
| MS.gene052116 | MS.gene45331 | PPI |
| MS.gene45331 | MS.gene45498 | PPI |
| MS.gene45331 | MS.gene34133 | PPI |
| MS.gene45331 | MS.gene052115 | PPI |
| MS.gene24695 | MS.gene45331 | PPI |
| MS.gene45331 | MS.gene49126 | PPI |
| MS.gene006258 | MS.gene45331 | PPI |
| MS.gene45331 | MS.gene31148 | PPI |
| MS.gene45331 | MS.gene007198 | PPI |
| MS.gene30963 | MS.gene45331 | PPI |
| MS.gene45331 | MS.gene24730 | PPI |
| MS.gene061150 | MS.gene45331 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45331.t1 | MTR_4g045980 | 98.680 | 303 | 3 | 1 | 1 | 302 | 1 | 303 | 0.0 | 608 |
| MS.gene45331.t1 | MTR_2g089795 | 76.042 | 288 | 67 | 2 | 1 | 288 | 1 | 286 | 5.06e-159 | 445 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45331.t1 | AT2G20890 | 69.024 | 297 | 73 | 5 | 2 | 292 | 3 | 286 | 1.02e-142 | 404 |
Find 63 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATGGAACCAACAATTT+TGG | 0.156594 | 4.3:-53947976 | MS.gene45331:CDS |
| CTTTCTTCCACTCGCTTCTT+TGG | 0.224844 | 4.3:-53951120 | MS.gene45331:CDS |
| AGAAGTTGAGGGGACTTTAA+AGG | 0.233722 | 4.3:-53948087 | MS.gene45331:CDS |
| TGCCAATTCCGTTTCCAAAT+TGG | 0.235533 | 4.3:-53951034 | MS.gene45331:CDS |
| TGAGGCCATTTCAAAATGTT+TGG | 0.285166 | 4.3:-53946748 | MS.gene45331:CDS |
| GGAACACCGAACAACCAATT+TGG | 0.320518 | 4.3:+53951020 | None:intergenic |
| CGGTGTTCCTCTTCTGTGTC+AGG | 0.335981 | 4.3:-53951006 | MS.gene45331:intron |
| CTCTAGATGAAAACTCAATC+AGG | 0.355791 | 4.3:+53948114 | None:intergenic |
| CTAACTCAAGAAGACGAAAA+AGG | 0.366194 | 4.3:+53948003 | None:intergenic |
| GCAGAAAGAGCAGGTGGAAA+TGG | 0.366441 | 4.3:-53948059 | MS.gene45331:CDS |
| CCGTTTCCAAATTGGTTGTT+CGG | 0.370999 | 4.3:-53951026 | MS.gene45331:CDS |
| GAGGCCATTTCAAAATGTTT+GGG | 0.371107 | 4.3:-53946747 | MS.gene45331:CDS |
| TATGATCCTGTATTTGCTCT+TGG | 0.383099 | 4.3:-53948986 | MS.gene45331:CDS |
| AACCAATTTGGAAACGGAAT+TGG | 0.385037 | 4.3:+53951032 | None:intergenic |
| GTCAATTCAACAGCTTTGTT+CGG | 0.391152 | 4.3:-53947428 | MS.gene45331:intron |
| TGTATCTCATCAGATGTTGC+TGG | 0.405952 | 4.3:+53949023 | None:intergenic |
| CAGAAAGAGCAGGTGGAAAT+GGG | 0.407573 | 4.3:-53948058 | MS.gene45331:CDS |
| TCGCAATCTGCTTTCTAAGT+TGG | 0.429863 | 4.3:-53947359 | MS.gene45331:CDS |
| GAAGAAGAAAATAGAAGAAA+GGG | 0.446296 | 4.3:-53946790 | MS.gene45331:CDS |
| AGCATATCGTTGCGCTATGT+TGG | 0.446792 | 4.3:-53951066 | MS.gene45331:CDS |
| AGAAGAAGAAAATAGAAGAA+AGG | 0.447419 | 4.3:-53946791 | MS.gene45331:CDS |
| TATCTACAACTCTGTGCTAC+AGG | 0.458194 | 4.3:-53949056 | MS.gene45331:CDS |
| AGCATACATTAACGCATTGA+AGG | 0.462951 | 4.3:-53948894 | MS.gene45331:CDS |
| AGGAAGATCCAGCGCAATAC+AGG | 0.472774 | 4.3:-53948874 | MS.gene45331:intron |
| AAATCGAACTGCATCTGAAT+CGG | 0.488178 | 4.3:+53951095 | None:intergenic |
| AGAAAGGGCTGAACCACAAA+AGG | 0.489128 | 4.3:-53946775 | MS.gene45331:CDS |
| TGCTAAAGGAATACATTGAC+AGG | 0.497269 | 4.3:-53947321 | MS.gene45331:intron |
| TGCACAGAAGTTAGAAGAGT+GGG | 0.505507 | 4.3:-53948159 | MS.gene45331:CDS |
| AACTTTGTCTCAGAAACAGT+TGG | 0.506286 | 4.3:+53949115 | None:intergenic |
| TATAGTCGTTTCTTTGCAGT+TGG | 0.508113 | 4.3:-53948026 | MS.gene45331:CDS |
| ATCTAGAGAAGGAGAAGTTG+AGG | 0.517674 | 4.3:-53948099 | MS.gene45331:CDS |
| CCGAACAACCAATTTGGAAA+CGG | 0.518129 | 4.3:+53951026 | None:intergenic |
| GAAGAAGTTACGGCGGCCAT+CGG | 0.519226 | 4.3:+53951192 | None:intergenic |
| TCAATGCGTTAATGTATGCT+TGG | 0.520925 | 4.3:+53948897 | None:intergenic |
| CATTCTAACCTGTATTGCGC+TGG | 0.521899 | 4.3:+53948866 | None:intergenic |
| AAGGATATTGCAGAAAGAGC+AGG | 0.525042 | 4.3:-53948068 | MS.gene45331:CDS |
| ACAAAGCCAAGAGCAAATAC+AGG | 0.548987 | 4.3:+53948980 | None:intergenic |
| TCTAGAGAAGGAGAAGTTGA+GGG | 0.549571 | 4.3:-53948098 | MS.gene45331:CDS |
| TGAACCACAAAAGGCTAATG+AGG | 0.552905 | 4.3:-53946766 | MS.gene45331:CDS |
| ACAAGCTAAAGAGCTGCTAA+AGG | 0.557940 | 4.3:-53947335 | MS.gene45331:CDS |
| CACTCACTCAATCTTCTCAA+AGG | 0.560956 | 4.3:-53951155 | MS.gene45331:CDS |
| TTTCAAACCTGACACAGAAG+AGG | 0.562747 | 4.3:+53950999 | None:intergenic |
| CACTGTATATGACCAACTCA+TGG | 0.564562 | 4.3:-53948957 | MS.gene45331:CDS |
| TAGGATACCCTTCCATGAGT+TGG | 0.569068 | 4.3:+53948945 | None:intergenic |
| GTATATGACCAACTCATGGA+AGG | 0.575651 | 4.3:-53948953 | MS.gene45331:CDS |
| TCTTGAGTTAGCAAATGCAA+TGG | 0.577069 | 4.3:-53947991 | MS.gene45331:CDS |
| GAATGAGAAAGAAGAAGTTA+CGG | 0.577141 | 4.3:+53951182 | None:intergenic |
| TCTAGATGAAAACTCAATCA+GGG | 0.581656 | 4.3:+53948115 | None:intergenic |
| AGCACAGAGTTGTAGATACT+AGG | 0.593993 | 4.3:+53949061 | None:intergenic |
| TTTGTCTCAGAAACAGTTGG+AGG | 0.595131 | 4.3:+53949118 | None:intergenic |
| GCATCTCTATCCTCATCACT+AGG | 0.603750 | 4.3:+53948926 | None:intergenic |
| TTGTCTCAGAAACAGTTGGA+GGG | 0.613813 | 4.3:+53949119 | None:intergenic |
| ATGCACAGAAGTTAGAAGAG+TGG | 0.618365 | 4.3:-53948160 | MS.gene45331:CDS |
| GTTAATGTATGCTTGGAAGA+TGG | 0.618779 | 4.3:+53948904 | None:intergenic |
| GAGCAAATACAGGATCATAA+CGG | 0.626380 | 4.3:+53948990 | None:intergenic |
| GAGTTGTAGATACTAGGTAT+CGG | 0.630185 | 4.3:+53949067 | None:intergenic |
| ATCGGAACCAAAGAAGCGAG+TGG | 0.641210 | 4.3:+53951113 | None:intergenic |
| GATATTGCAGAAAGAGCAGG+TGG | 0.641882 | 4.3:-53948065 | MS.gene45331:CDS |
| TATATGACCAACTCATGGAA+GGG | 0.644279 | 4.3:-53948952 | MS.gene45331:CDS |
| AGAAAGAGCAGGTGGAAATG+GGG | 0.649638 | 4.3:-53948057 | MS.gene45331:CDS |
| CTAGAGAAGGAGAAGTTGAG+GGG | 0.650582 | 4.3:-53948097 | MS.gene45331:CDS |
| GGAAGGGTATCCTAGTGATG+AGG | 0.675183 | 4.3:-53948936 | MS.gene45331:CDS |
| TGAGAAAGAAGAAGTTACGG+CGG | 0.721704 | 4.3:+53951185 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAAATATTATATATCAT+AGG | + | chr4.3:53950661-53950680 | None:intergenic | 10.0% |
| !!! | TCAATTTTCAATATAAATAA+AGG | + | chr4.3:53950219-53950238 | None:intergenic | 10.0% |
| !!! | TTAGAATTTGATTTTTTAAT+TGG | - | chr4.3:53947021-53947040 | MS.gene45331:intron | 10.0% |
| !! | ATTTATTCAAAATCAAATCT+AGG | + | chr4.3:53949659-53949678 | None:intergenic | 15.0% |
| !! | CATATTATTATCTTGATAAA+AGG | + | chr4.3:53948627-53948646 | None:intergenic | 15.0% |
| !! | TTAATTAATTAAAGTGACAA+AGG | + | chr4.3:53948237-53948256 | None:intergenic | 15.0% |
| !!! | AAACTACTTTTTAGTATATA+TGG | - | chr4.3:53949511-53949530 | MS.gene45331:intron | 15.0% |
| !!! | ATTTTTTAATTGGAAGTATA+TGG | - | chr4.3:53947031-53947050 | MS.gene45331:intron | 15.0% |
| !! | AACTCAATAGTTGAATATAA+TGG | - | chr4.3:53949115-53949134 | MS.gene45331:CDS | 20.0% |
| !! | AATAATCTAATTCTGGATTT+AGG | - | chr4.3:53949175-53949194 | MS.gene45331:intron | 20.0% |
| !! | ATAATCTAATTCTGGATTTA+GGG | - | chr4.3:53949176-53949195 | MS.gene45331:intron | 20.0% |
| !! | CACATAAATAATAGTTAATG+TGG | - | chr4.3:53947783-53947802 | MS.gene45331:intron | 20.0% |
| !! | GTTATACATGTTGAAAATTT+AGG | + | chr4.3:53951036-53951055 | None:intergenic | 20.0% |
| !! | TAAATCCAGAATTAGATTAT+TGG | + | chr4.3:53949176-53949195 | None:intergenic | 20.0% |
| !! | TGATTATGTTTGATTATGAA+GGG | - | chr4.3:53947228-53947247 | MS.gene45331:intron | 20.0% |
| !! | TTATGTATTATGTGTATGTT+TGG | + | chr4.3:53947494-53947513 | None:intergenic | 20.0% |
| !! | TTGATTATGTTTGATTATGA+AGG | - | chr4.3:53947227-53947246 | MS.gene45331:intron | 20.0% |
| !!! | AAACATAAATCACTTTTAGT+CGG | + | chr4.3:53947293-53947312 | None:intergenic | 20.0% |
| !!! | AAAGGTTATTTCGAAAATAA+TGG | + | chr4.3:53950920-53950939 | None:intergenic | 20.0% |
| !!! | AAATATTTTATAGAGGATGA+TGG | - | chr4.3:53949349-53949368 | MS.gene45331:intron | 20.0% |
| !!! | AACTTTTTTGAACAAAAAGT+TGG | + | chr4.3:53948279-53948298 | None:intergenic | 20.0% |
| !!! | ACTATAGTATTTTCTGATAA+AGG | + | chr4.3:53950938-53950957 | None:intergenic | 20.0% |
| !!! | ACTTTTTTGAACAAAAAGTT+GGG | + | chr4.3:53948278-53948297 | None:intergenic | 20.0% |
| !!! | GATTTTAGATTGATATTTAC+AGG | + | chr4.3:53948469-53948488 | None:intergenic | 20.0% |
| !!! | TTTACTTGATATTTTTGGAT+TGG | - | chr4.3:53947913-53947932 | MS.gene45331:intron | 20.0% |
| !!! | TTTTTATTTCTTTTCCCTTT+TGG | + | chr4.3:53948703-53948722 | None:intergenic | 20.0% |
| !!! | TTTTTGAGAATTTGAGAATT+GGG | - | chr4.3:53946978-53946997 | MS.gene45331:intron | 20.0% |
| !!! | TTTTTTGAGAATTTGAGAAT+TGG | - | chr4.3:53946977-53946996 | MS.gene45331:intron | 20.0% |
| ! | AAACTGAAGAACTTAGTAAA+TGG | + | chr4.3:53950883-53950902 | None:intergenic | 25.0% |
| ! | AACTGAAGAACTTAGTAAAT+GGG | + | chr4.3:53950882-53950901 | None:intergenic | 25.0% |
| ! | AATTTGGATTCAAAGATCAT+TGG | + | chr4.3:53947552-53947571 | None:intergenic | 25.0% |
| ! | AGAAGAAGAAAATAGAAGAA+AGG | - | chr4.3:53951111-53951130 | MS.gene45331:CDS | 25.0% |
| ! | ATAGTTAATGTGGCTAAATA+AGG | - | chr4.3:53947793-53947812 | MS.gene45331:intron | 25.0% |
| ! | ATGTAAGACAAAGAATTCAT+AGG | + | chr4.3:53949688-53949707 | None:intergenic | 25.0% |
| ! | ATTTACAGGAAAATTTCTCA+GGG | + | chr4.3:53948455-53948474 | None:intergenic | 25.0% |
| ! | CAAGAACTAATAATTTAAGC+AGG | + | chr4.3:53949391-53949410 | None:intergenic | 25.0% |
| ! | CATGACAACTTAAATGAATT+GGG | + | chr4.3:53949961-53949980 | None:intergenic | 25.0% |
| ! | CTATAAAATATTTGAGCAAC+TGG | + | chr4.3:53949342-53949361 | None:intergenic | 25.0% |
| ! | CTTCTAATTGAAAATTAAGC+TGG | - | chr4.3:53950853-53950872 | MS.gene45331:intron | 25.0% |
| ! | GAAGAAGAAAATAGAAGAAA+GGG | - | chr4.3:53951112-53951131 | MS.gene45331:CDS | 25.0% |
| ! | GAAGTATGAATTTGCAATTT+AGG | + | chr4.3:53948681-53948700 | None:intergenic | 25.0% |
| ! | GACTAAAAGTGATTTATGTT+TGG | - | chr4.3:53947292-53947311 | MS.gene45331:intron | 25.0% |
| ! | TAATCTAATTCTGGATTTAG+GGG | - | chr4.3:53949177-53949196 | MS.gene45331:intron | 25.0% |
| ! | TATTTACAGGAAAATTTCTC+AGG | + | chr4.3:53948456-53948475 | None:intergenic | 25.0% |
| ! | TCACAAATCATAAAATCATG+TGG | + | chr4.3:53949282-53949301 | None:intergenic | 25.0% |
| ! | TCATGACAACTTAAATGAAT+TGG | + | chr4.3:53949962-53949981 | None:intergenic | 25.0% |
| ! | TTACTAAGTTCTTCAGTTTA+GGG | - | chr4.3:53950884-53950903 | MS.gene45331:intron | 25.0% |
| ! | TTGTTATCAATACTTAGTCA+TGG | - | chr4.3:53948736-53948755 | MS.gene45331:intron | 25.0% |
| ! | TTTACTAAGTTCTTCAGTTT+AGG | - | chr4.3:53950883-53950902 | MS.gene45331:intron | 25.0% |
| !! | AAAATTGATTCTGACATGTT+TGG | + | chr4.3:53947452-53947471 | None:intergenic | 25.0% |
| !! | ATTTTCGTTTCAATTTAGAG+TGG | - | chr4.3:53947061-53947080 | MS.gene45331:intron | 25.0% |
| !! | CATGTTGAAAATTTAGGTTA+AGG | + | chr4.3:53951030-53951049 | None:intergenic | 25.0% |
| !! | CTGCATTTACTTGATATTTT+TGG | - | chr4.3:53947908-53947927 | MS.gene45331:intron | 25.0% |
| !! | GACAAAGTTAAATTTTCTCA+AGG | - | chr4.3:53948801-53948820 | MS.gene45331:intron | 25.0% |
| !! | GTGATCTCAATTTTATGAAA+AGG | + | chr4.3:53950793-53950812 | None:intergenic | 25.0% |
| !! | GTTGCTCAAATATTTTATAG+AGG | - | chr4.3:53949342-53949361 | MS.gene45331:intron | 25.0% |
| !! | TGTTGTAATTGGAAGTATAA+CGG | - | chr4.3:53949436-53949455 | MS.gene45331:intron | 25.0% |
| !! | TTGTTCTTGAACTATCTTTT+AGG | - | chr4.3:53948131-53948150 | MS.gene45331:CDS | 25.0% |
| !!! | AAATAAGTATTGGAGTAAGT+TGG | + | chr4.3:53949995-53950014 | None:intergenic | 25.0% |
| !!! | AATAAGTATTGGAGTAAGTT+GGG | + | chr4.3:53949994-53950013 | None:intergenic | 25.0% |
| !!! | AATGATTAGTTTTCTAGAAC+TGG | + | chr4.3:53950076-53950095 | None:intergenic | 25.0% |
| !!! | ATGACTAAGTATTGATAACA+AGG | + | chr4.3:53948737-53948756 | None:intergenic | 25.0% |
| !!! | TATGATTTGTGAATCACTTT+TGG | - | chr4.3:53949290-53949309 | MS.gene45331:intron | 25.0% |
| AACAACTTAATAGCATTGCA+AGG | + | chr4.3:53950617-53950636 | None:intergenic | 30.0% | |
| AATATAATCAGCAGGTGATA+CGG | - | chr4.3:53948525-53948544 | MS.gene45331:intron | 30.0% | |
| AGATTCAATCTTGAACATCA+AGG | + | chr4.3:53950757-53950776 | None:intergenic | 30.0% | |
| AGCAGAAAAGCTTATAAAAG+TGG | - | chr4.3:53948066-53948085 | MS.gene45331:CDS | 30.0% | |
| ATATGACTATCATCAGACTA+TGG | - | chr4.3:53950363-53950382 | MS.gene45331:intron | 30.0% | |
| ATCAGTGAAACTGTAGAATA+AGG | + | chr4.3:53948336-53948355 | None:intergenic | 30.0% | |
| CTTAAAATGTGGCAAACAAA+AGG | + | chr4.3:53947993-53948012 | None:intergenic | 30.0% | |
| CTTCCAATTACAACATTATC+AGG | + | chr4.3:53949431-53949450 | None:intergenic | 30.0% | |
| GAATGAGAAAGAAGAAGTTA+CGG | + | chr4.3:53946723-53946742 | None:intergenic | 30.0% | |
| GAATTACTCAGTAACTTTGA+AGG | - | chr4.3:53950269-53950288 | MS.gene45331:intron | 30.0% | |
| GATTCAATCTTGAACATCAA+GGG | + | chr4.3:53950756-53950775 | None:intergenic | 30.0% | |
| GCAAATTCATACTTCCAAAA+GGG | - | chr4.3:53948686-53948705 | MS.gene45331:intron | 30.0% | |
| GTGGTTTAAATATAATCAGC+AGG | - | chr4.3:53948517-53948536 | MS.gene45331:intron | 30.0% | |
| GTGTTATCAATCTCAGATAA+CGG | - | chr4.3:53947608-53947627 | MS.gene45331:intron | 30.0% | |
| TAAGAACTGACACATTAATG+CGG | - | chr4.3:53947152-53947171 | MS.gene45331:intron | 30.0% | |
| TATTTATGTGCAGTCCATAT+TGG | + | chr4.3:53947773-53947792 | None:intergenic | 30.0% | |
| TCTAGATGAAAACTCAATCA+GGG | + | chr4.3:53949790-53949809 | None:intergenic | 30.0% | |
| TCTCACCAATAATCTAATTC+TGG | - | chr4.3:53949168-53949187 | MS.gene45331:intron | 30.0% | |
| TGCAAATTCATACTTCCAAA+AGG | - | chr4.3:53948685-53948704 | MS.gene45331:intron | 30.0% | |
| ! | AAGTTGTTCTCACTTCTTTT+GGG | - | chr4.3:53950629-53950648 | MS.gene45331:intron | 30.0% |
| ! | ATTGAGTTTTCATCTAGAGA+AGG | - | chr4.3:53949792-53949811 | MS.gene45331:intron | 30.0% |
| ! | GTAACCTTTTCCAAAATTGT+TGG | + | chr4.3:53949939-53949958 | None:intergenic | 30.0% |
| ! | GTATCAATCCACAGAATTTT+GGG | + | chr4.3:53948417-53948436 | None:intergenic | 30.0% |
| ! | GTTCCTGATAATGTTGTAAT+TGG | - | chr4.3:53949425-53949444 | MS.gene45331:intron | 30.0% |
| ! | GTTTCAATTTAGAGTGGAAT+GGG | - | chr4.3:53947067-53947086 | MS.gene45331:intron | 30.0% |
| ! | TAACGAAATAAGTTGGCAAT+AGG | + | chr4.3:53950114-53950133 | None:intergenic | 30.0% |
| ! | TAAGTTGTTCTCACTTCTTT+TGG | - | chr4.3:53950628-53950647 | MS.gene45331:intron | 30.0% |
| ! | TATCAATCCACAGAATTTTG+GGG | + | chr4.3:53948416-53948435 | None:intergenic | 30.0% |
| ! | TATTGGAGCATCTTAAAATG+TGG | + | chr4.3:53948004-53948023 | None:intergenic | 30.0% |
| ! | TGGAATGATCTTTTACTTCA+GGG | - | chr4.3:53951088-53951107 | MS.gene45331:CDS | 30.0% |
| ! | TTGGAATGATCTTTTACTTC+AGG | - | chr4.3:53951087-53951106 | MS.gene45331:CDS | 30.0% |
| ! | TTTTGTATGTTTCATGACTC+TGG | + | chr4.3:53949565-53949584 | None:intergenic | 30.0% |
| !! | AAAAAGTGTTGATCGAGATT+TGG | - | chr4.3:53950513-53950532 | MS.gene45331:intron | 30.0% |
| !! | ACATAATCAAAGTGTTTTGC+AGG | + | chr4.3:53947217-53947236 | None:intergenic | 30.0% |
| !! | CAACTATTGAGTTGAACATT+TGG | + | chr4.3:53949108-53949127 | None:intergenic | 30.0% |
| !! | GTTGTGAATAGTTCTGAATT+TGG | - | chr4.3:53948653-53948672 | MS.gene45331:intron | 30.0% |
| !! | TGTTCTATTTTCAAGAGTGT+TGG | + | chr4.3:53947838-53947857 | None:intergenic | 30.0% |
| !! | TTCAACATGTATAACTTGCT+TGG | - | chr4.3:53951041-53951060 | MS.gene45331:CDS | 30.0% |
| !! | TTGAGTTGAACATTTGGTAT+AGG | + | chr4.3:53949102-53949121 | None:intergenic | 30.0% |
| !! | TTGTCCCAAACATTTTGAAA+TGG | + | chr4.3:53951162-53951181 | None:intergenic | 30.0% |
| !!! | CTGTGGTTTTTGTTTTTAAG+TGG | - | chr4.3:53949074-53949093 | MS.gene45331:CDS | 30.0% |
| AAATCGAACTGCATCTGAAT+CGG | + | chr4.3:53946810-53946829 | None:intergenic | 35.0% | |
| AACCAATTTGGAAACGGAAT+TGG | + | chr4.3:53946873-53946892 | None:intergenic | 35.0% | |
| AACTTTGTCTCAGAAACAGT+TGG | + | chr4.3:53948790-53948809 | None:intergenic | 35.0% | |
| AAGCATAAAAGGGAGCAATT+TGG | + | chr4.3:53947568-53947587 | None:intergenic | 35.0% | |
| AATACAAGACAGCACCAATA+TGG | - | chr4.3:53947756-53947775 | MS.gene45331:intron | 35.0% | |
| ACAAGTAGAATCAATTCACG+AGG | - | chr4.3:53947401-53947420 | MS.gene45331:CDS | 35.0% | |
| AGATGATTTAACACAGTCTG+CGG | + | chr4.3:53949151-53949170 | None:intergenic | 35.0% | |
| AGCATACATTAACGCATTGA+AGG | - | chr4.3:53949008-53949027 | MS.gene45331:CDS | 35.0% | |
| AGTATCATGTGTTTGATGCT+TGG | - | chr4.3:53947116-53947135 | MS.gene45331:intron | 35.0% | |
| AGTGCAAGTATCATTGTCTT+TGG | - | chr4.3:53949618-53949637 | MS.gene45331:intron | 35.0% | |
| ATGTTTGGTTGCAATTGTAG+AGG | + | chr4.3:53947479-53947498 | None:intergenic | 35.0% | |
| ATTCATCGGTAACAAATTGC+TGG | - | chr4.3:53950302-53950321 | MS.gene45331:intron | 35.0% | |
| CTAACTCAAGAAGACGAAAA+AGG | + | chr4.3:53949902-53949921 | None:intergenic | 35.0% | |
| CTAGTGATATACTGAGAACT+TGG | - | chr4.3:53950965-53950984 | MS.gene45331:intron | 35.0% | |
| CTCTAGATGAAAACTCAATC+AGG | + | chr4.3:53949791-53949810 | None:intergenic | 35.0% | |
| CTTCAGCTAACGAAATAAGT+TGG | + | chr4.3:53950121-53950140 | None:intergenic | 35.0% | |
| GAGCAAATACAGGATCATAA+CGG | + | chr4.3:53948915-53948934 | None:intergenic | 35.0% | |
| GAGGCCATTTCAAAATGTTT+GGG | - | chr4.3:53951155-53951174 | MS.gene45331:CDS | 35.0% | |
| GAGTTGTAGATACTAGGTAT+CGG | + | chr4.3:53948838-53948857 | None:intergenic | 35.0% | |
| GATGCTCCAATAAAATACAC+TGG | - | chr4.3:53948012-53948031 | MS.gene45331:CDS | 35.0% | |
| GTTAATGTATGCTTGGAAGA+TGG | + | chr4.3:53949001-53949020 | None:intergenic | 35.0% | |
| TATAGTCGTTTCTTTGCAGT+TGG | - | chr4.3:53949876-53949895 | MS.gene45331:intron | 35.0% | |
| TATATGACCAACTCATGGAA+GGG | - | chr4.3:53948950-53948969 | MS.gene45331:CDS | 35.0% | |
| TATGATCCTGTATTTGCTCT+TGG | - | chr4.3:53948916-53948935 | MS.gene45331:CDS | 35.0% | |
| TCAATGCGTTAATGTATGCT+TGG | + | chr4.3:53949008-53949027 | None:intergenic | 35.0% | |
| TCTCAATTGAACTTTGACGT+TGG | - | chr4.3:53947180-53947199 | MS.gene45331:intron | 35.0% | |
| TCTTGAGTTAGCAAATGCAA+TGG | - | chr4.3:53949911-53949930 | MS.gene45331:intron | 35.0% | |
| TGAGGCCATTTCAAAATGTT+TGG | - | chr4.3:53951154-53951173 | MS.gene45331:CDS | 35.0% | |
| TGCTAAAGGAATACATTGAC+AGG | - | chr4.3:53950581-53950600 | MS.gene45331:intron | 35.0% | |
| TGTTTGGTTGCAATTGTAGA+GGG | + | chr4.3:53947478-53947497 | None:intergenic | 35.0% | |
| TTGAACAAAAAGTTGGGCAA+GGG | + | chr4.3:53948272-53948291 | None:intergenic | 35.0% | |
| TTTGAACAAAAAGTTGGGCA+AGG | + | chr4.3:53948273-53948292 | None:intergenic | 35.0% | |
| ! | AAAATACACTGGCCTACATA+GGG | - | chr4.3:53948023-53948042 | MS.gene45331:CDS | 35.0% |
| ! | AATAAGTTGGCAATAGGACT+TGG | + | chr4.3:53950108-53950127 | None:intergenic | 35.0% |
| ! | AGTTCTTCAGTTTAGGGTTT+AGG | - | chr4.3:53950890-53950909 | MS.gene45331:intron | 35.0% |
| ! | CGTTTCAATTTAGAGTGGAA+TGG | - | chr4.3:53947066-53947085 | MS.gene45331:intron | 35.0% |
| ! | GGTATCAATCCACAGAATTT+TGG | + | chr4.3:53948418-53948437 | None:intergenic | 35.0% |
| ! | TAAAATACACTGGCCTACAT+AGG | - | chr4.3:53948022-53948041 | MS.gene45331:CDS | 35.0% |
| ! | TGATTCTACTTGTTGAAGCT+AGG | + | chr4.3:53947394-53947413 | None:intergenic | 35.0% |
| ! | TGCAATGGAACCAACAATTT+TGG | - | chr4.3:53949926-53949945 | MS.gene45331:intron | 35.0% |
| ! | TGTAGGCCAGTGTATTTTAT+TGG | + | chr4.3:53948021-53948040 | None:intergenic | 35.0% |
| ! | TTATCAATCTCAGATAACGG+AGG | - | chr4.3:53947611-53947630 | MS.gene45331:intron | 35.0% |
| ! | TTATTTTCCTTGCCCTATGT+AGG | + | chr4.3:53948038-53948057 | None:intergenic | 35.0% |
| ! | TTTTTGACCCCAAAATTCTG+TGG | - | chr4.3:53948406-53948425 | MS.gene45331:intron | 35.0% |
| !! | AATTTGTAGCTCTGATTGAG+TGG | + | chr4.3:53949245-53949264 | None:intergenic | 35.0% |
| !! | ATTTGTAGCTCTGATTGAGT+GGG | + | chr4.3:53949244-53949263 | None:intergenic | 35.0% |
| !! | GGAACCAACAATTTTGGAAA+AGG | - | chr4.3:53949932-53949951 | MS.gene45331:intron | 35.0% |
| !! | GTCAATTCAACAGCTTTGTT+CGG | - | chr4.3:53950474-53950493 | MS.gene45331:intron | 35.0% |
| !! | TATCAATCTCAGATAACGGA+GGG | - | chr4.3:53947612-53947631 | MS.gene45331:intron | 35.0% |
| !!! | ATTGGTGCTGTCTTGTATTT+TGG | + | chr4.3:53947755-53947774 | None:intergenic | 35.0% |
| !!! | GTATAACTTGCTTGGTTTTG+CGG | - | chr4.3:53951049-53951068 | MS.gene45331:CDS | 35.0% |
| AAATAATCCCAGCCACATAG+TGG | + | chr4.3:53950438-53950457 | None:intergenic | 40.0% | |
| AAGGAGAATGCTGCATTCAT+CGG | - | chr4.3:53950288-53950307 | MS.gene45331:intron | 40.0% | |
| AAGGATATTGCAGAAAGAGC+AGG | - | chr4.3:53949834-53949853 | MS.gene45331:intron | 40.0% | |
| ACAAAGCCAAGAGCAAATAC+AGG | + | chr4.3:53948925-53948944 | None:intergenic | 40.0% | |
| ACAAGCTAAAGAGCTGCTAA+AGG | - | chr4.3:53950567-53950586 | MS.gene45331:intron | 40.0% | |
| AGAAGTTGAGGGGACTTTAA+AGG | - | chr4.3:53949815-53949834 | MS.gene45331:intron | 40.0% | |
| AGCACAGAGTTGTAGATACT+AGG | + | chr4.3:53948844-53948863 | None:intergenic | 40.0% | |
| ATAGAACACACACACATCTC+AGG | - | chr4.3:53947850-53947869 | MS.gene45331:intron | 40.0% | |
| ATCTAGAGAAGGAGAAGTTG+AGG | - | chr4.3:53949803-53949822 | MS.gene45331:intron | 40.0% | |
| ATGCACAGAAGTTAGAAGAG+TGG | - | chr4.3:53949742-53949761 | MS.gene45331:intron | 40.0% | |
| ATGTTCAGGCTTCATTAGAG+GGG | - | chr4.3:53950178-53950197 | MS.gene45331:intron | 40.0% | |
| CACTCACTCAATCTTCTCAA+AGG | - | chr4.3:53946747-53946766 | MS.gene45331:CDS | 40.0% | |
| CACTGTATATGACCAACTCA+TGG | - | chr4.3:53948945-53948964 | MS.gene45331:CDS | 40.0% | |
| CATGTTCAGGCTTCATTAGA+GGG | - | chr4.3:53950177-53950196 | MS.gene45331:intron | 40.0% | |
| CCGAACAACCAATTTGGAAA+CGG | + | chr4.3:53946879-53946898 | None:intergenic | 40.0% | |
| CCGTTTCCAAATTGGTTGTT+CGG | - | chr4.3:53946876-53946895 | MS.gene45331:intron | 40.0% | |
| CGCAAAGCTCAAGCATAAAA+GGG | + | chr4.3:53947578-53947597 | None:intergenic | 40.0% | |
| CGGTAACAAATTGCTGGTAA+AGG | - | chr4.3:53950308-53950327 | MS.gene45331:intron | 40.0% | |
| CTTTCATACATGACAGAGTG+TGG | - | chr4.3:53948498-53948517 | MS.gene45331:intron | 40.0% | |
| GTATATGACCAACTCATGGA+AGG | - | chr4.3:53948949-53948968 | MS.gene45331:CDS | 40.0% | |
| GTGTCTATTCTACCACTATG+TGG | - | chr4.3:53950423-53950442 | MS.gene45331:intron | 40.0% | |
| GTTTGGTTGCAATTGTAGAG+GGG | + | chr4.3:53947477-53947496 | None:intergenic | 40.0% | |
| TATCTACAACTCTGTGCTAC+AGG | - | chr4.3:53948846-53948865 | MS.gene45331:intron | 40.0% | |
| TATTCTACCACTATGTGGCT+GGG | - | chr4.3:53950428-53950447 | MS.gene45331:intron | 40.0% | |
| TCGCAATCTGCTTTCTAAGT+TGG | - | chr4.3:53950543-53950562 | MS.gene45331:intron | 40.0% | |
| TCTAGAGAAGGAGAAGTTGA+GGG | - | chr4.3:53949804-53949823 | MS.gene45331:intron | 40.0% | |
| TGAACAAAAAGTTGGGCAAG+GGG | + | chr4.3:53948271-53948290 | None:intergenic | 40.0% | |
| TGAACCACAAAAGGCTAATG+AGG | - | chr4.3:53951136-53951155 | MS.gene45331:CDS | 40.0% | |
| TGAGAAAGAAGAAGTTACGG+CGG | + | chr4.3:53946720-53946739 | None:intergenic | 40.0% | |
| TGAGTGTTTGTATGTCTCTG+TGG | - | chr4.3:53949057-53949076 | MS.gene45331:CDS | 40.0% | |
| TGATATACTGAGAACTTGGC+AGG | - | chr4.3:53950969-53950988 | MS.gene45331:intron | 40.0% | |
| TGCACAGAAGTTAGAAGAGT+GGG | - | chr4.3:53949743-53949762 | MS.gene45331:intron | 40.0% | |
| TGCCAATTCCGTTTCCAAAT+TGG | - | chr4.3:53946868-53946887 | MS.gene45331:intron | 40.0% | |
| TGGGGTTTCGAAATCATGTT+TGG | + | chr4.3:53949218-53949237 | None:intergenic | 40.0% | |
| TGTATCTCATCAGATGTTGC+TGG | + | chr4.3:53948882-53948901 | None:intergenic | 40.0% | |
| TTGTCTCAGAAACAGTTGGA+GGG | + | chr4.3:53948786-53948805 | None:intergenic | 40.0% | |
| TTTCAAACCTGACACAGAAG+AGG | + | chr4.3:53946906-53946925 | None:intergenic | 40.0% | |
| TTTGTCTCAGAAACAGTTGG+AGG | + | chr4.3:53948787-53948806 | None:intergenic | 40.0% | |
| ! | CAATTTAGAGTGGAATGGGT+TGG | - | chr4.3:53947071-53947090 | MS.gene45331:intron | 40.0% |
| ! | CCTTTTATGCTTGAGCTTTG+CGG | - | chr4.3:53947576-53947595 | MS.gene45331:intron | 40.0% |
| ! | TCACTAAGTGTTCTTGCTGT+CGG | + | chr4.3:53947644-53947663 | None:intergenic | 40.0% |
| !! | AGTTTAGCCTTGTAACCTCA+AGG | - | chr4.3:53948172-53948191 | MS.gene45331:intron | 40.0% |
| AGAAAGAGCAGGTGGAAATG+GGG | - | chr4.3:53949845-53949864 | MS.gene45331:intron | 45.0% | |
| AGAAAGGGCTGAACCACAAA+AGG | - | chr4.3:53951127-53951146 | MS.gene45331:CDS | 45.0% | |
| AGCATATCGTTGCGCTATGT+TGG | - | chr4.3:53946836-53946855 | MS.gene45331:intron | 45.0% | |
| CAGAAAGAGCAGGTGGAAAT+GGG | - | chr4.3:53949844-53949863 | MS.gene45331:intron | 45.0% | |
| CATTCTAACCTGTATTGCGC+TGG | + | chr4.3:53949039-53949058 | None:intergenic | 45.0% | |
| CCATGTTCAGGCTTCATTAG+AGG | - | chr4.3:53950176-53950195 | MS.gene45331:intron | 45.0% | |
| CCGCAAAGCTCAAGCATAAA+AGG | + | chr4.3:53947579-53947598 | None:intergenic | 45.0% | |
| CCTCTAATGAAGCCTGAACA+TGG | + | chr4.3:53950179-53950198 | None:intergenic | 45.0% | |
| CTAGAGAAGGAGAAGTTGAG+GGG | - | chr4.3:53949805-53949824 | MS.gene45331:intron | 45.0% | |
| CTATTCTACCACTATGTGGC+TGG | - | chr4.3:53950427-53950446 | MS.gene45331:intron | 45.0% | |
| CTCAGGGACACAACAAAAGT+TGG | + | chr4.3:53948439-53948458 | None:intergenic | 45.0% | |
| CTCTGATTGAGTGGGATTTG+GGG | + | chr4.3:53949236-53949255 | None:intergenic | 45.0% | |
| CTTTCTTCCACTCGCTTCTT+TGG | - | chr4.3:53946782-53946801 | MS.gene45331:CDS | 45.0% | |
| GAACAAAAAGTTGGGCAAGG+GGG | + | chr4.3:53948270-53948289 | None:intergenic | 45.0% | |
| GATATTGCAGAAAGAGCAGG+TGG | - | chr4.3:53949837-53949856 | MS.gene45331:intron | 45.0% | |
| GATCTCTCTTCTCCATGTTC+AGG | - | chr4.3:53950164-53950183 | MS.gene45331:intron | 45.0% | |
| GCATCTCTATCCTCATCACT+AGG | + | chr4.3:53948979-53948998 | None:intergenic | 45.0% | |
| GCTCTGATTGAGTGGGATTT+GGG | + | chr4.3:53949237-53949256 | None:intergenic | 45.0% | |
| GGAACACCGAACAACCAATT+TGG | + | chr4.3:53946885-53946904 | None:intergenic | 45.0% | |
| GTACCGAGTTCAAACAACCT+CGG | - | chr4.3:53948194-53948213 | MS.gene45331:intron | 45.0% | |
| TAAAATGCACACGAGGGACT+TGG | - | chr4.3:53947940-53947959 | MS.gene45331:intron | 45.0% | |
| TACCGAGTTCAAACAACCTC+GGG | - | chr4.3:53948195-53948214 | MS.gene45331:intron | 45.0% | |
| TAGGATACCCTTCCATGAGT+TGG | + | chr4.3:53948960-53948979 | None:intergenic | 45.0% | |
| TGTTTGAACTCGGTACCTTG+AGG | + | chr4.3:53948190-53948209 | None:intergenic | 45.0% | |
| ! | AAGTCCCTCGTGTGCATTTT+AGG | + | chr4.3:53947941-53947960 | None:intergenic | 45.0% |
| ! | AGCTCTGATTGAGTGGGATT+TGG | + | chr4.3:53949238-53949257 | None:intergenic | 45.0% |
| ! | CATGTTTGGTTGCTTTCGAG+TGG | + | chr4.3:53947438-53947457 | None:intergenic | 45.0% |
| !! | CGACTTGCTATTTGAGTGAG+TGG | - | chr4.3:53947963-53947982 | MS.gene45331:intron | 45.0% |
| !!! | ATGGCCTCATTAGCCTTTTG+TGG | + | chr4.3:53951143-53951162 | None:intergenic | 45.0% |
| !!! | GCGGCTGGATTTTGATTCTT+TGG | - | chr4.3:53951068-53951087 | MS.gene45331:CDS | 45.0% |
| !! | ATATATAATAAAATAAGTAT+TGG | + | chr4.3:53950005-53950024 | None:intergenic | 5.0% |
| !! | TGTAAAAATTATAAAATAAA+GGG | + | chr4.3:53947682-53947701 | None:intergenic | 5.0% |
| !! | TTGTAAAAATTATAAAATAA+AGG | + | chr4.3:53947683-53947702 | None:intergenic | 5.0% |
| ACCGAGTTCAAACAACCTCG+GGG | - | chr4.3:53948196-53948215 | MS.gene45331:intron | 50.0% | |
| AGGAAGATCCAGCGCAATAC+AGG | - | chr4.3:53949028-53949047 | MS.gene45331:CDS | 50.0% | |
| AGTTCAAACAACCTCGGGGA+CGG | - | chr4.3:53948200-53948219 | MS.gene45331:intron | 50.0% | |
| ATCGGAACCAAAGAAGCGAG+TGG | + | chr4.3:53946792-53946811 | None:intergenic | 50.0% | |
| CTCGGTACCTTGAGGTTACA+AGG | + | chr4.3:53948182-53948201 | None:intergenic | 50.0% | |
| CTGTGCATCTACTCTGCAGA+GGG | + | chr4.3:53949730-53949749 | None:intergenic | 50.0% | |
| GCAGAAAGAGCAGGTGGAAA+TGG | - | chr4.3:53949843-53949862 | MS.gene45331:intron | 50.0% | |
| GGTGCCTAAAATGCACACGA+GGG | - | chr4.3:53947934-53947953 | MS.gene45331:intron | 50.0% | |
| TCCCCGAGGTTGTTTGAACT+CGG | + | chr4.3:53948200-53948219 | None:intergenic | 50.0% | |
| TCTGTGCATCTACTCTGCAG+AGG | + | chr4.3:53949731-53949750 | None:intergenic | 50.0% | |
| TGGTGCCTAAAATGCACACG+AGG | - | chr4.3:53947933-53947952 | MS.gene45331:intron | 50.0% | |
| !! | GGAAGGGTATCCTAGTGATG+AGG | - | chr4.3:53948966-53948985 | MS.gene45331:CDS | 50.0% |
| !!! | AACTTGCTTGGTTTTGCGGC+TGG | - | chr4.3:53951053-53951072 | MS.gene45331:CDS | 50.0% |
| CGGTGTTCCTCTTCTGTGTC+AGG | - | chr4.3:53946896-53946915 | MS.gene45331:intron | 55.0% | |
| ! | ACACTGGCCTACATAGGGCA+AGG | - | chr4.3:53948028-53948047 | MS.gene45331:CDS | 55.0% |
| CAAACAACCTCGGGGACGGT+TGG | - | chr4.3:53948204-53948223 | MS.gene45331:intron | 60.0% | |
| CCTCGGGGACGGTTGGAAAA+TGG | - | chr4.3:53948211-53948230 | MS.gene45331:intron | 60.0% | |
| ! | CCATTTTCCAACCGTCCCCG+AGG | + | chr4.3:53948214-53948233 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 53946713 | 53951211 | 53946713 | ID=MS.gene45331 |
| chr4.3 | mRNA | 53946713 | 53951211 | 53946713 | ID=MS.gene45331.t1;Parent=MS.gene45331 |
| chr4.3 | exon | 53951007 | 53951211 | 53951007 | ID=MS.gene45331.t1.exon1;Parent=MS.gene45331.t1 |
| chr4.3 | CDS | 53951007 | 53951211 | 53951007 | ID=cds.MS.gene45331.t1;Parent=MS.gene45331.t1 |
| chr4.3 | exon | 53948875 | 53949142 | 53948875 | ID=MS.gene45331.t1.exon2;Parent=MS.gene45331.t1 |
| chr4.3 | CDS | 53948875 | 53949142 | 53948875 | ID=cds.MS.gene45331.t1;Parent=MS.gene45331.t1 |
| chr4.3 | exon | 53947971 | 53948187 | 53947971 | ID=MS.gene45331.t1.exon3;Parent=MS.gene45331.t1 |
| chr4.3 | CDS | 53947971 | 53948187 | 53947971 | ID=cds.MS.gene45331.t1;Parent=MS.gene45331.t1 |
| chr4.3 | exon | 53947322 | 53947437 | 53947322 | ID=MS.gene45331.t1.exon4;Parent=MS.gene45331.t1 |
| chr4.3 | CDS | 53947322 | 53947437 | 53947322 | ID=cds.MS.gene45331.t1;Parent=MS.gene45331.t1 |
| chr4.3 | exon | 53946713 | 53946815 | 53946713 | ID=MS.gene45331.t1.exon5;Parent=MS.gene45331.t1 |
| chr4.3 | CDS | 53946713 | 53946815 | 53946713 | ID=cds.MS.gene45331.t1;Parent=MS.gene45331.t1 |
| Gene Sequence |
| Protein sequence |
