AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47556

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47556.t1 MTR_4g087965 97.476 317 8 0 1 317 30 346 0.0 651
MS.gene47556.t1 MTR_7g029030 49.175 303 145 4 12 314 24 317 8.71e-95 284
MS.gene47556.t1 MTR_1g090760 43.709 302 168 2 12 313 27 326 5.28e-90 272
MS.gene47556.t1 MTR_8g062780 44.040 302 166 2 12 313 22 320 1.83e-86 263
MS.gene47556.t1 MTR_1g009750 43.791 306 165 4 12 315 26 326 6.51e-85 259
MS.gene47556.t1 MTR_4g127670 45.246 305 158 4 12 314 23 320 2.03e-84 257
MS.gene47556.t1 MTR_5g016010 42.857 308 166 5 12 315 26 327 4.78e-83 254
MS.gene47556.t1 MTR_4g095450 43.831 308 158 6 12 315 26 322 9.11e-82 251
MS.gene47556.t1 MTR_0286s0010 42.295 305 166 7 12 313 33 330 2.29e-81 250
MS.gene47556.t1 MTR_6g008075 42.295 305 166 7 12 313 33 330 2.29e-81 250
MS.gene47556.t1 MTR_2g088770 42.484 306 167 6 12 315 25 323 1.41e-78 243
MS.gene47556.t1 MTR_2g029815 42.810 306 168 5 12 315 28 328 2.64e-78 243
MS.gene47556.t1 MTR_2g029820 42.810 306 168 5 12 315 28 328 1.19e-77 241
MS.gene47556.t1 MTR_4g046713 41.967 305 170 5 12 315 26 324 1.27e-76 238
MS.gene47556.t1 MTR_2g437770 42.071 309 166 5 7 315 44 339 1.22e-75 236
MS.gene47556.t1 MTR_6g027440 44.040 302 158 6 12 313 20 310 1.30e-75 234
MS.gene47556.t1 MTR_2g029830 42.020 307 169 6 12 315 27 327 3.99e-75 234
MS.gene47556.t1 MTR_8g075100 41.860 301 164 6 13 313 26 315 2.60e-74 231
MS.gene47556.t1 MTR_7g107520 41.254 303 169 6 13 315 25 318 6.44e-74 230
MS.gene47556.t1 MTR_1g025980 40.635 315 177 6 1 315 12 316 7.29e-74 230
MS.gene47556.t1 MTR_1g101830 40.066 302 172 5 12 313 26 318 1.15e-73 230
MS.gene47556.t1 MTR_7g086870 42.193 301 159 6 13 313 22 307 1.85e-73 229
MS.gene47556.t1 MTR_2g029800 41.830 306 171 5 12 315 28 328 4.36e-73 229
MS.gene47556.t1 MTR_7g086820 41.860 301 163 6 13 313 20 308 5.49e-73 228
MS.gene47556.t1 MTR_7g093370 40.984 305 172 6 12 313 68 367 6.79e-73 229
MS.gene47556.t1 MTR_6g043240 39.672 305 169 5 11 315 40 329 7.84e-73 229
MS.gene47556.t1 MTR_2g029750 42.484 306 169 5 12 315 28 328 9.26e-73 228
MS.gene47556.t1 MTR_3g092990 41.060 302 174 3 12 313 25 322 1.15e-72 227
MS.gene47556.t1 MTR_1g009750 40.461 304 161 5 12 315 26 309 1.32e-72 227
MS.gene47556.t1 MTR_2g029730 40.717 307 173 6 12 315 24 324 3.06e-72 227
MS.gene47556.t1 MTR_5g022870 41.639 305 163 7 11 313 21 312 3.56e-72 226
MS.gene47556.t1 MTR_2g008710 42.434 304 161 6 15 314 29 322 6.09e-72 225
MS.gene47556.t1 MTR_1g038680 42.384 302 169 5 15 314 31 329 6.51e-72 226
MS.gene47556.t1 MTR_5g021060 40.584 308 177 5 7 313 24 326 2.07e-71 224
MS.gene47556.t1 MTR_3g094650 41.254 303 166 5 12 313 27 318 4.30e-71 223
MS.gene47556.t1 MTR_2g029850 40.196 306 176 5 12 315 28 328 1.80e-70 223
MS.gene47556.t1 MTR_4g133800 41.196 301 165 6 14 314 42 330 1.83e-70 222
MS.gene47556.t1 MTR_5g017850 38.636 308 184 4 6 313 20 322 2.61e-70 221
MS.gene47556.t1 MTR_5g074970 44.262 305 156 6 12 313 29 322 3.04e-70 221
MS.gene47556.t1 MTR_6g043280 39.935 308 172 5 8 315 36 330 4.51e-70 221
MS.gene47556.t1 MTR_1g054205 39.803 304 177 5 12 313 23 322 5.89e-70 221
MS.gene47556.t1 MTR_2g029740 41.176 306 173 5 12 315 28 328 8.42e-70 221
MS.gene47556.t1 MTR_4g132490 39.934 303 176 3 12 314 28 324 3.02e-69 219
MS.gene47556.t1 MTR_1g077000 41.860 301 159 8 13 313 39 323 4.22e-69 218
MS.gene47556.t1 MTR_5g017860 38.636 308 184 4 6 313 20 322 5.66e-69 218
MS.gene47556.t1 MTR_4g030890 40.984 305 156 8 17 313 104 392 5.86e-69 221
MS.gene47556.t1 MTR_2g029560 38.562 306 181 5 12 315 23 323 8.54e-69 218
MS.gene47556.t1 MTR_4g031140 40.984 305 156 8 17 313 32 320 8.58e-69 218
MS.gene47556.t1 MTR_2g028980 40.717 307 173 6 12 315 28 328 2.20e-68 217
MS.gene47556.t1 MTR_6g043460 40.264 303 169 5 11 313 34 324 3.89e-68 216
MS.gene47556.t1 MTR_4g029170 41.270 315 171 7 1 313 15 317 8.55e-68 215
MS.gene47556.t1 MTR_2g029860 39.016 305 179 5 12 314 28 327 1.58e-67 215
MS.gene47556.t1 MTR_4g114210 41.720 314 168 7 6 314 14 317 1.79e-67 214
MS.gene47556.t1 MTR_2g029910 39.216 306 180 4 12 315 29 330 6.82e-67 213
MS.gene47556.t1 MTR_2g084080 40.132 304 170 6 12 315 24 315 9.60e-67 212
MS.gene47556.t1 MTR_8g076820 40.940 298 170 6 17 313 34 326 1.27e-66 212
MS.gene47556.t1 MTR_2g084110 40.132 304 170 6 12 315 24 315 2.20e-66 211
MS.gene47556.t1 MTR_3g466200 42.623 305 160 7 12 313 24 316 2.54e-66 211
MS.gene47556.t1 MTR_1g022970 39.934 303 175 5 13 313 46 343 3.26e-66 211
MS.gene47556.t1 MTR_4g029180 42.333 300 159 7 16 313 30 317 3.42e-66 211
MS.gene47556.t1 MTR_7g072510 38.689 305 175 5 9 313 16 308 3.45e-66 210
MS.gene47556.t1 MTR_2g084020 39.672 305 171 7 12 315 24 316 3.49e-66 211
MS.gene47556.t1 MTR_2g040000 40.584 308 169 6 12 313 28 327 4.12e-66 211
MS.gene47556.t1 MTR_7g072480 39.672 305 172 5 9 313 20 312 4.27e-66 210
MS.gene47556.t1 MTR_4g125940 40.323 310 172 7 9 313 24 325 4.93e-66 211
MS.gene47556.t1 MTR_5g083860 39.604 303 171 5 12 313 30 321 1.15e-65 209
MS.gene47556.t1 MTR_2g084000 39.610 308 173 7 9 315 22 317 2.32e-65 208
MS.gene47556.t1 MTR_0155s0040 39.867 301 165 8 13 313 27 311 4.95e-65 207
MS.gene47556.t1 MTR_3g072190 40.264 303 169 5 11 313 24 314 5.34e-65 207
MS.gene47556.t1 MTR_4g122640 40.264 303 171 7 13 313 38 332 6.19e-65 208
MS.gene47556.t1 MTR_1g086490 39.009 323 181 7 4 315 21 338 1.31e-64 207
MS.gene47556.t1 MTR_1g066710 36.513 304 181 5 12 313 26 319 3.18e-64 206
MS.gene47556.t1 MTR_5g049280 37.255 306 184 5 12 313 32 333 7.06e-64 205
MS.gene47556.t1 MTR_2g084090 38.816 304 175 5 12 315 24 316 7.65e-64 204
MS.gene47556.t1 MTR_2g084010 39.672 305 171 7 12 315 24 316 1.07e-63 204
MS.gene47556.t1 MTR_3g105790 38.065 310 181 4 7 314 19 319 1.37e-63 204
MS.gene47556.t1 MTR_5g014100 40.063 317 179 6 3 313 16 327 2.24e-63 204
MS.gene47556.t1 MTR_1g086320 39.032 310 176 8 12 315 29 331 5.63e-63 202
MS.gene47556.t1 MTR_4g083710 40.523 306 169 6 12 314 26 321 1.15e-62 202
MS.gene47556.t1 MTR_3g092990 39.073 302 169 4 12 313 25 311 2.37e-62 201
MS.gene47556.t1 MTR_2g029830 42.146 261 142 6 58 315 5 259 7.52e-62 198
MS.gene47556.t1 MTR_5g074710 40.391 307 165 9 12 313 24 317 1.34e-61 199
MS.gene47556.t1 MTR_3g094670 39.604 303 171 5 12 313 27 318 5.95e-61 197
MS.gene47556.t1 MTR_5g074760 40.065 307 166 9 12 313 24 317 6.12e-61 197
MS.gene47556.t1 MTR_4g125940 42.545 275 145 7 44 313 4 270 8.09e-61 195
MS.gene47556.t1 MTR_4g029190 39.667 300 167 6 17 314 50 337 1.58e-60 197
MS.gene47556.t1 MTR_1g066380 35.855 304 183 5 12 313 26 319 2.23e-60 196
MS.gene47556.t1 MTR_5g074740 39.739 307 167 9 12 313 24 317 3.10e-60 195
MS.gene47556.t1 MTR_2g067440 35.000 340 186 6 4 314 51 384 3.60e-60 197
MS.gene47556.t1 MTR_3g467600 37.380 313 179 8 6 313 20 320 4.75e-60 195
MS.gene47556.t1 MTR_3g094630 40.264 303 169 5 12 313 27 318 5.39e-60 194
MS.gene47556.t1 MTR_1g066640 35.855 304 183 5 12 313 26 319 8.91e-60 194
MS.gene47556.t1 MTR_4g029200 38.614 303 174 5 12 314 45 335 1.10e-59 194
MS.gene47556.t1 MTR_2g078610 35.843 332 179 6 13 314 76 403 2.45e-59 196
MS.gene47556.t1 MTR_4g132110 35.410 305 185 5 13 315 32 326 3.02e-59 193
MS.gene47556.t1 MTR_2g077990 36.036 333 179 6 12 314 75 403 4.74e-59 195
MS.gene47556.t1 MTR_2g099175 37.582 306 178 6 12 313 35 331 8.05e-59 192
MS.gene47556.t1 MTR_2g078280 35.625 320 173 5 12 301 75 391 2.16e-57 190
MS.gene47556.t1 MTR_4g132110 35.484 310 183 7 13 315 32 331 2.57e-57 188
MS.gene47556.t1 MTR_2g008160 38.961 308 173 6 12 314 23 320 3.55e-57 187
MS.gene47556.t1 MTR_5g033470 35.873 315 194 7 3 313 63 373 8.55e-57 188
MS.gene47556.t1 MTR_5g074860 36.875 320 182 10 1 313 15 321 8.85e-57 186
MS.gene47556.t1 MTR_1g115900 37.049 305 176 8 12 313 26 317 1.51e-55 183
MS.gene47556.t1 MTR_1g066680 35.197 304 184 6 12 313 26 318 2.63e-55 182
MS.gene47556.t1 MTR_7g026990 37.417 302 166 7 17 313 35 318 5.59e-55 182
MS.gene47556.t1 MTR_4g074995 39.216 306 160 7 12 314 23 305 7.09e-55 181
MS.gene47556.t1 MTR_2g008730 37.829 304 151 6 15 314 29 298 7.65e-55 181
MS.gene47556.t1 MTR_3g466180 37.086 302 178 5 12 313 30 319 1.55e-52 175
MS.gene47556.t1 MTR_4g074990 37.049 305 165 6 12 314 23 302 3.37e-52 174
MS.gene47556.t1 MTR_3g072190 40.698 258 141 5 56 313 2 247 4.06e-52 172
MS.gene47556.t1 MTR_2g067450 35.599 309 180 8 13 314 11 307 1.13e-50 170
MS.gene47556.t1 MTR_3g105790 41.485 229 130 3 88 314 17 243 1.04e-47 160
MS.gene47556.t1 MTR_0147s0010 33.231 325 172 6 13 314 77 379 3.66e-47 163
MS.gene47556.t1 MTR_4g074980 39.749 239 133 4 12 248 24 253 1.01e-46 158
MS.gene47556.t1 MTR_1g066380 35.135 259 156 5 57 313 3 251 4.03e-45 154
MS.gene47556.t1 MTR_4g074980 44.681 188 101 2 12 199 24 208 3.07e-43 150
MS.gene47556.t1 MTR_2g008160 34.416 308 152 6 12 314 23 285 3.48e-43 150
MS.gene47556.t1 MTR_2g008160 42.640 197 96 3 12 208 23 202 3.88e-43 147
MS.gene47556.t1 MTR_5g074700 37.719 228 117 8 89 313 5 210 1.23e-35 128
MS.gene47556.t1 MTR_5g074860 30.625 320 163 10 1 313 15 282 1.62e-33 125
MS.gene47556.t1 MTR_2g029880 36.979 192 107 5 126 315 7 186 1.22e-30 115
MS.gene47556.t1 MTR_3g072210 37.037 189 108 5 127 313 55 234 5.80e-30 114
MS.gene47556.t1 MTR_7g086790 38.624 189 90 6 60 248 17 179 1.67e-26 103
MS.gene47556.t1 MTR_7g072490 31.646 237 97 5 59 295 2 173 5.08e-25 100
MS.gene47556.t1 MTR_3g072260 45.133 113 59 2 11 123 24 133 1.69e-23 94.4
MS.gene47556.t1 MTR_2g078560 30.000 220 123 4 125 314 99 317 2.08e-23 98.6
MS.gene47556.t1 MTR_2g077980 29.412 289 158 10 64 314 1 281 3.12e-23 97.4
MS.gene47556.t1 MTR_5g058120 35.583 163 92 3 151 313 6 155 2.74e-21 91.3
MS.gene47556.t1 MTR_6g048160 58.108 74 24 3 52 125 22 88 5.49e-17 75.1
MS.gene47556.t1 MTR_4g114220 48.315 89 33 3 37 125 27 102 2.29e-16 75.1
MS.gene47556.t1 MTR_3g462850 31.159 138 90 3 180 313 9 145 4.09e-16 74.7
MS.gene47556.t1 MTR_1g089005 41.739 115 57 3 13 121 15 125 3.02e-15 72.4
MS.gene47556.t1 MTR_7g086810 33.058 121 52 1 13 133 6 97 1.79e-13 69.3
MS.gene47556.t1 MTR_4g031040 31.538 130 61 3 126 250 25 131 3.27e-13 66.2
MS.gene47556.t1 MTR_7g086785 40.698 86 47 1 59 144 4 85 4.22e-13 65.9
MS.gene47556.t1 MTR_4g012865 50.000 54 27 0 13 66 77 130 4.26e-13 66.2
MS.gene47556.t1 MTR_1g098320 43.590 78 43 1 239 316 47 123 9.14e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47556.t1 AT2G34060 65.147 307 107 0 11 317 40 346 5.83e-155 437
MS.gene47556.t1 AT5G14130 48.726 314 155 3 1 314 20 327 1.24e-96 289
MS.gene47556.t1 AT5G14130 48.726 314 155 3 1 314 61 368 4.34e-96 289
MS.gene47556.t1 AT2G18980 48.197 305 148 4 12 314 24 320 2.91e-91 275
MS.gene47556.t1 AT1G24110 45.741 317 166 5 1 316 10 321 1.30e-90 273
MS.gene47556.t1 AT5G67400 46.382 304 157 4 12 313 26 325 4.10e-88 267
MS.gene47556.t1 AT4G17690 43.750 304 163 3 10 313 23 318 1.14e-87 266
MS.gene47556.t1 AT4G30170 45.455 308 158 4 9 314 23 322 5.35e-87 264
MS.gene47556.t1 AT4G37520 45.752 306 156 5 12 313 26 325 3.92e-86 262
MS.gene47556.t1 AT5G47000 45.183 301 158 3 13 313 33 326 5.74e-85 259
MS.gene47556.t1 AT4G37530 46.078 306 155 5 12 313 26 325 5.85e-85 259
MS.gene47556.t1 AT4G37520 45.098 306 155 6 12 313 26 322 8.55e-83 253
MS.gene47556.t1 AT3G49960 43.464 306 163 5 12 313 26 325 1.04e-80 248
MS.gene47556.t1 AT3G28200 41.060 302 169 3 12 313 20 312 6.99e-80 246
MS.gene47556.t1 AT5G40150 40.397 302 172 3 12 313 31 324 1.40e-79 245
MS.gene47556.t1 AT1G05260 42.395 309 169 6 9 315 22 323 4.68e-76 236
MS.gene47556.t1 AT3G03670 41.311 305 167 5 12 313 22 317 5.88e-76 236
MS.gene47556.t1 AT4G33420 45.545 303 149 8 11 313 35 321 6.22e-76 236
MS.gene47556.t1 AT4G37530 46.947 262 130 4 12 269 26 282 1.25e-75 233
MS.gene47556.t1 AT4G33420 45.545 303 149 8 11 313 82 368 3.28e-75 235
MS.gene47556.t1 AT4G36430 40.604 298 171 5 17 313 34 326 7.55e-74 231
MS.gene47556.t1 AT5G17820 40.066 302 166 5 12 313 23 309 1.63e-73 229
MS.gene47556.t1 AT5G51890 43.357 286 151 6 13 295 26 303 2.35e-73 229
MS.gene47556.t1 AT5G17820 40.066 302 166 5 12 313 76 362 2.61e-72 228
MS.gene47556.t1 AT5G66390 40.268 298 172 5 17 313 37 329 4.77e-72 226
MS.gene47556.t1 AT1G71695 42.089 316 164 7 4 314 35 336 6.38e-72 226
MS.gene47556.t1 AT5G06720 40.132 304 175 6 12 313 31 329 1.15e-71 225
MS.gene47556.t1 AT3G21770 40.523 306 173 6 12 315 28 326 2.12e-71 224
MS.gene47556.t1 AT4G08770 41.830 306 169 6 12 313 23 323 2.62e-71 224
MS.gene47556.t1 AT2G18150 39.262 298 175 6 17 313 40 332 3.14e-71 224
MS.gene47556.t1 AT4G31760 41.176 306 167 5 12 314 28 323 4.91e-71 223
MS.gene47556.t1 AT5G06730 39.145 304 178 5 12 313 32 330 7.71e-71 224
MS.gene47556.t1 AT1G49570 39.414 307 180 4 9 313 44 346 9.44e-71 223
MS.gene47556.t1 AT4G11290 39.869 306 177 6 12 315 24 324 1.79e-70 222
MS.gene47556.t1 AT2G18140 38.158 304 182 6 11 313 33 331 2.08e-70 222
MS.gene47556.t1 AT4G08780 41.503 306 170 6 12 313 23 323 2.17e-70 222
MS.gene47556.t1 AT2G38390 39.672 305 176 6 12 313 30 329 6.89e-70 221
MS.gene47556.t1 AT5G19880 40.000 305 177 5 12 313 24 325 1.57e-69 219
MS.gene47556.t1 AT2G39040 39.103 312 182 6 8 315 41 348 2.13e-69 220
MS.gene47556.t1 AT1G44970 40.468 299 171 5 17 313 49 342 3.12e-69 219
MS.gene47556.t1 AT3G32980 39.542 306 176 6 12 313 30 330 4.95e-69 219
MS.gene47556.t1 AT3G49120 40.196 306 174 6 12 313 31 331 6.05e-69 219
MS.gene47556.t1 AT3G50990 39.744 312 178 8 5 313 33 337 8.12e-69 218
MS.gene47556.t1 AT5G22410 41.176 306 165 8 12 313 27 321 9.28e-69 218
MS.gene47556.t1 AT1G05240 38.387 310 180 5 9 315 22 323 1.31e-68 217
MS.gene47556.t1 AT1G05250 38.387 310 180 5 9 315 22 323 1.31e-68 217
MS.gene47556.t1 AT5G05340 39.542 306 173 5 9 313 26 320 1.36e-68 217
MS.gene47556.t1 AT5G64110 41.860 301 161 7 17 314 38 327 1.46e-68 217
MS.gene47556.t1 AT3G49110 39.869 306 175 6 12 313 32 332 2.10e-68 217
MS.gene47556.t1 AT4G16270 41.311 305 169 7 13 315 50 346 2.28e-68 217
MS.gene47556.t1 AT2G24800 40.385 312 162 5 12 314 30 326 2.34e-68 216
MS.gene47556.t1 AT5G64120 39.333 300 171 5 15 314 37 325 2.58e-68 216
MS.gene47556.t1 AT5G19890 41.694 307 162 7 12 313 29 323 5.50e-68 216
MS.gene47556.t1 AT1G30870 42.105 304 162 6 13 314 51 342 6.67e-67 213
MS.gene47556.t1 AT2G41480 41.368 307 165 6 13 314 29 325 1.09e-66 212
MS.gene47556.t1 AT5G42180 39.236 288 169 4 11 298 21 302 1.58e-66 211
MS.gene47556.t1 AT2G38380 39.016 305 178 6 12 313 30 329 2.35e-66 212
MS.gene47556.t1 AT2G22420 39.667 300 167 8 17 313 27 315 2.87e-66 211
MS.gene47556.t1 AT4G26010 40.000 305 160 8 12 313 21 305 9.05e-65 207
MS.gene47556.t1 AT4G26010 40.000 305 160 8 12 313 49 333 1.24e-64 207
MS.gene47556.t1 AT3G01190 39.274 303 171 8 13 313 26 317 7.35e-64 204
MS.gene47556.t1 AT3G17070 39.130 299 168 7 13 305 38 328 1.74e-63 204
MS.gene47556.t1 AT4G25980 38.312 308 176 6 12 314 25 323 1.09e-62 202
MS.gene47556.t1 AT5G64100 38.284 303 171 6 15 314 39 328 1.90e-62 201
MS.gene47556.t1 AT1G14540 37.829 304 177 6 12 314 20 312 2.63e-62 201
MS.gene47556.t1 AT5G24070 38.710 310 174 8 10 313 32 331 3.44e-62 201
MS.gene47556.t1 AT5G58400 41.118 304 166 7 12 313 29 321 4.42e-62 200
MS.gene47556.t1 AT1G68850 37.013 308 181 6 13 313 30 331 6.00e-62 200
MS.gene47556.t1 AT5G15180 36.808 307 179 6 13 315 32 327 1.27e-61 199
MS.gene47556.t1 AT1G14550 39.542 306 172 7 12 315 25 319 1.65e-61 199
MS.gene47556.t1 AT1G77100 38.961 308 169 9 12 314 23 316 2.23e-61 198
MS.gene47556.t1 AT5G39580 38.870 301 172 8 15 314 27 316 6.05e-61 197
MS.gene47556.t1 AT5G58390 40.132 304 169 6 12 313 20 312 9.63e-61 196
MS.gene47556.t1 AT4G33870 33.631 336 184 4 13 314 68 398 2.90e-60 198
MS.gene47556.t1 AT4G21960 35.738 305 184 5 13 315 31 325 3.62e-60 195
MS.gene47556.t1 AT2G43480 36.893 309 179 8 11 313 33 331 1.82e-57 189
MS.gene47556.t1 AT2G37130 33.770 305 189 5 12 313 29 323 2.67e-57 188
MS.gene47556.t1 AT2G37130 33.775 302 187 5 15 313 1 292 9.11e-57 186
MS.gene47556.t1 AT1G34510 38.562 306 163 8 12 313 21 305 7.33e-56 184
MS.gene47556.t1 AT2G35380 37.621 311 167 9 17 313 34 331 2.47e-55 183
MS.gene47556.t1 AT3G17070 37.354 257 146 8 55 305 18 265 1.49e-46 159
MS.gene47556.t1 AT2G35380 37.945 253 132 8 75 313 2 243 2.56e-41 144
MS.gene47556.t1 AT2G24800 42.941 170 90 1 12 181 30 192 3.12e-41 144
MS.gene47556.t1 AT4G25980 35.945 217 127 4 12 223 70 279 4.41e-38 137
MS.gene47556.t1 AT5G39580 41.176 170 92 4 15 184 27 188 1.67e-35 129
MS.gene47556.t1 AT3G42570 35.000 120 74 3 66 183 32 149 8.89e-14 68.2

Find 86 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGACATGGTTGCTCTTTC+TGG 0.065768 4.3:-25441334 MS.gene47556:CDS
TTCAAACAATCACCTGTTTC+TGG 0.172092 4.3:-25443164 MS.gene47556:CDS
CCCTTCTTCACTTGGTAATA+GGG 0.193331 4.3:+25441469 None:intergenic
AGAATGTACTGCCCAAATTT+TGG 0.207449 4.3:-25441199 MS.gene47556:CDS
CTAAGAGCTTTCAATAGTTT+AGG 0.223221 4.3:+25441220 None:intergenic
TCTGTGTTTCCACCAAAATT+TGG 0.228638 4.3:+25441187 None:intergenic
ATATTTGACCATGCATATTA+TGG 0.241704 4.3:-25441130 MS.gene47556:CDS
TCCCTTCTTCACTTGGTAAT+AGG 0.256193 4.3:+25441468 None:intergenic
TAAGAGCTTTCAATAGTTTA+GGG 0.257185 4.3:+25441221 None:intergenic
CTTTCTGGTGCCCACACAAT+TGG 0.269689 4.3:-25441319 MS.gene47556:CDS
AATAGTTTAGGGTTCATATC+TGG 0.303629 4.3:+25441232 None:intergenic
CCCATCTTCCCTTCTTCACT+TGG 0.323437 4.3:+25441461 None:intergenic
CTGTGTTTCCACCAAAATTT+GGG 0.343143 4.3:+25441188 None:intergenic
TTCTACCTGTGGACAAGATT+TGG 0.346708 4.3:+25443217 None:intergenic
ATCAAAATCTTCAATTCAAA+AGG 0.367858 4.3:-25441367 MS.gene47556:CDS
AAAGGAGTAGTTGCATCAAA+TGG 0.398961 4.3:+25441154 None:intergenic
TCTGCCAACTCCTTGCTCCC+TGG 0.412835 4.3:+25442943 None:intergenic
ATTATGGTAACTTGCAGAAC+AGG 0.413578 4.3:-25441114 MS.gene47556:CDS
ATGGTGGCTGGTCCAGAAAC+AGG 0.445073 4.3:+25443152 None:intergenic
GCTAGCATCGGACCAAGCTT+TGG 0.451580 4.3:-25441083 MS.gene47556:CDS
AAGGAGTAGTTGCATCAAAT+GGG 0.454067 4.3:+25441155 None:intergenic
TTCAAAAGGCTTAACTATAC+AGG 0.454734 4.3:-25441353 MS.gene47556:CDS
TTAGGGTTCATATCTGGATC+GGG 0.474005 4.3:+25441238 None:intergenic
GATCGGGTTGCCCCTTGCCT+CGG 0.475883 4.3:+25441254 None:intergenic
TTACTTCTACAAAGCAATCA+TGG 0.487368 4.3:+25443117 None:intergenic
AGCATCAAAGCCAGGGAGCA+AGG 0.489904 4.3:-25442953 MS.gene47556:CDS
TGAACCAGTGACTTGGTTCG+TGG 0.491604 4.3:+25441052 None:intergenic
ACCAAGTGAAGAAGGGAAGA+TGG 0.492354 4.3:-25441462 MS.gene47556:CDS
ACCCTATTACCAAGTGAAGA+AGG 0.494533 4.3:-25441470 MS.gene47556:CDS
CTCTACAATTACCGAGGCAA+GGG 0.496200 4.3:-25441265 MS.gene47556:CDS
CCACAGGTAGAACAGCTTGT+TGG 0.497989 4.3:-25443206 MS.gene47556:CDS
AGAGGATAATAAAGATTTGA+GGG 0.498161 4.3:-25442911 MS.gene47556:CDS
AATAAAGATTTGAGGGTGGA+AGG 0.500941 4.3:-25442904 MS.gene47556:CDS
TTTAGGGTTCATATCTGGAT+CGG 0.504196 4.3:+25441237 None:intergenic
GAAAGATATCAATGGCATCA+AGG 0.505017 4.3:-25441435 MS.gene47556:CDS
GGTAACTTGCAGAACAGGAT+GGG 0.509765 4.3:-25441109 MS.gene47556:CDS
CGTAGTAATTAACGCTAAGC+TGG 0.515549 4.3:+25443240 None:intergenic
CAGAGGATAATAAAGATTTG+AGG 0.521535 4.3:-25442912 MS.gene47556:CDS
CCAAGTGAAGAAGGGAAGAT+GGG 0.523220 4.3:-25441461 MS.gene47556:CDS
AAAATCTTGAACCAGTGACT+TGG 0.526982 4.3:+25441045 None:intergenic
CATCAACGGTTGAGTTTGCA+CGG 0.527620 4.3:+25441395 None:intergenic
ATCGGACCAAGCTTTGGCAT+TGG 0.528716 4.3:-25441077 MS.gene47556:CDS
CTACAAAGCAATCATGGAAG+AGG 0.534733 4.3:+25443123 None:intergenic
TGCCTCGGTAATTGTAGAGG+CGG 0.545543 4.3:+25441269 None:intergenic
ATCAACGGTTGAGTTTGCAC+GGG 0.545631 4.3:+25441396 None:intergenic
TATCAATGGCATCAAGGGTA+GGG 0.553936 4.3:-25441429 MS.gene47556:CDS
GCCTCGGTAATTGTAGAGGC+GGG 0.554811 4.3:+25441270 None:intergenic
CCTCTACAATTACCGAGGCA+AGG 0.555029 4.3:-25441266 MS.gene47556:CDS
GTTTAGTGAAAGTTGTGAGA+GGG 0.555172 4.3:-25440967 MS.gene47556:CDS
ATATCAATGGCATCAAGGGT+AGG 0.557778 4.3:-25441430 MS.gene47556:CDS
TGGTAACTTGCAGAACAGGA+TGG 0.559476 4.3:-25441110 MS.gene47556:CDS
AAAGCCAGGGAGCAAGGAGT+TGG 0.559724 4.3:-25442947 MS.gene47556:CDS
AAGAGGAGACGAATGGTGGC+TGG 0.560284 4.3:+25443140 None:intergenic
CCCTATTACCAAGTGAAGAA+GGG 0.562996 4.3:-25441469 MS.gene47556:CDS
GTGAAGAAGGGAAGATGGGA+TGG 0.566639 4.3:-25441457 MS.gene47556:CDS
AAAGATATCAATGGCATCAA+GGG 0.572225 4.3:-25441434 MS.gene47556:CDS
CAGGATGGGGTTGCTAGCAT+CGG 0.578558 4.3:-25441095 MS.gene47556:CDS
TATGCATGGTCAAATATGAA+AGG 0.579897 4.3:+25441136 None:intergenic
GTGGATCCAATGCCAAAGCT+TGG 0.585349 4.3:+25441071 None:intergenic
GCAAGTTACCATAATATGCA+TGG 0.586628 4.3:+25441122 None:intergenic
GTTGGCAGAGAAAGATGCAG+AGG 0.587154 4.3:-25442929 MS.gene47556:CDS
GGATCCACGAACCAAGTCAC+TGG 0.591425 4.3:-25441056 MS.gene47556:CDS
ATGGGATGGAAAGATATCAA+TGG 0.591625 4.3:-25441443 MS.gene47556:CDS
CTACGCCAAATCTTGTCCAC+AGG 0.592646 4.3:-25443222 MS.gene47556:CDS
TCTGCACAGGACACCACACT+AGG 0.596049 4.3:+25442835 None:intergenic
CCTTGCCTCGGTAATTGTAG+AGG 0.602314 4.3:+25441266 None:intergenic
TAATTAACGCTAAGCTGGCG+AGG 0.605457 4.3:+25443245 None:intergenic
AGTTTAGTGAAAGTTGTGAG+AGG 0.609933 4.3:-25440968 MS.gene47556:CDS
GGATAATAAAGATTTGAGGG+TGG 0.613876 4.3:-25442908 MS.gene47556:CDS
AATTGCAAGAATATCTGCAC+AGG 0.614557 4.3:+25442822 None:intergenic
TATAAGGAAGGCCAAAGAAG+TGG 0.618453 4.3:-25442872 MS.gene47556:CDS
AAGGAAGGCCAAAGAAGTGG+TGG 0.621870 4.3:-25442869 MS.gene47556:CDS
AGGCTTAACTATACAGGACA+TGG 0.625897 4.3:-25441347 MS.gene47556:CDS
GTAACTTGCAGAACAGGATG+GGG 0.641831 4.3:-25441108 MS.gene47556:CDS
AATGAGCAAATCCAATTGTG+TGG 0.649262 4.3:+25441308 None:intergenic
TGATTGTTTGAATTGTTGAG+AGG 0.662875 4.3:+25443175 None:intergenic
TCAACGGTTGAGTTTGCACG+GGG 0.662885 4.3:+25441397 None:intergenic
ATGGAAGAGGAGACGAATGG+TGG 0.663722 4.3:+25443136 None:intergenic
AGGAGTAGTTGCATCAAATG+GGG 0.666012 4.3:+25441156 None:intergenic
TCTACAATTACCGAGGCAAG+GGG 0.667695 4.3:-25441264 MS.gene47556:CDS
CCAACAAGCTGTTCTACCTG+TGG 0.672022 4.3:+25443206 None:intergenic
ATGAGCAAATCCAATTGTGT+GGG 0.674056 4.3:+25441309 None:intergenic
ACCCGCCTCTACAATTACCG+AGG 0.674878 4.3:-25441271 MS.gene47556:CDS
TCATGTGTGACACAGGCAGG+GGG 0.702520 4.3:-25441493 MS.gene47556:intron
ATCATGGAAGAGGAGACGAA+TGG 0.708190 4.3:+25443133 None:intergenic
CAACGGTTGAGTTTGCACGG+GGG 0.732395 4.3:+25441398 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATATTAATTGTAGTTT+TGG - chr4.3:25442267-25442286 MS.gene47556:intron 10.0%
!!! TTTTGTTTTTAGTTTTTATT+TGG + chr4.3:25442585-25442604 None:intergenic 10.0%
!! GATATATTAAATCAAATTAG+TGG + chr4.3:25441465-25441484 None:intergenic 15.0%
!! TACAATTAATATTATAGTGT+GGG + chr4.3:25442263-25442282 None:intergenic 15.0%
!!! TCATTTCTTTTTATTTGAAT+TGG + chr4.3:25441907-25441926 None:intergenic 15.0%
!! AAAAATTAGGATTGGAAATT+TGG + chr4.3:25441507-25441526 None:intergenic 20.0%
!! ACAATTAATATTATAGTGTG+GGG + chr4.3:25442262-25442281 None:intergenic 20.0%
!! AGAAATAACTTTCAAAACTA+GGG + chr4.3:25441649-25441668 None:intergenic 20.0%
!! AGAACAATAATACTGAAAAT+TGG + chr4.3:25442474-25442493 None:intergenic 20.0%
!! ATCAAAATCTTCAATTCAAA+AGG - chr4.3:25442827-25442846 MS.gene47556:CDS 20.0%
!! CTACAATTAATATTATAGTG+TGG + chr4.3:25442264-25442283 None:intergenic 20.0%
!! TATTACTTTCTGTTAAGAAA+TGG - chr4.3:25442608-25442627 MS.gene47556:intron 20.0%
!! TATTATGTTCTGTTAAGAAA+TGG - chr4.3:25442649-25442668 MS.gene47556:intron 20.0%
!! TTTGGTATATGATTATGAAT+AGG - chr4.3:25441953-25441972 MS.gene47556:intron 20.0%
!!! AAATTTCCAATCCTAATTTT+TGG - chr4.3:25441506-25441525 MS.gene47556:intron 20.0%
!!! ATTTTTGATGTAACCATATT+TGG - chr4.3:25441670-25441689 MS.gene47556:intron 20.0%
! AGAGGATAATAAAGATTTGA+GGG - chr4.3:25441283-25441302 MS.gene47556:CDS 25.0%
! ATAATACTGAAAATTGGACT+TGG + chr4.3:25442468-25442487 None:intergenic 25.0%
! ATATTTGACCATGCATATTA+TGG - chr4.3:25443064-25443083 MS.gene47556:intron 25.0%
! ATGAAACCAAAAATTAGGAT+TGG + chr4.3:25441515-25441534 None:intergenic 25.0%
! CAACATAGAGTACAAAAATT+CGG + chr4.3:25442396-25442415 None:intergenic 25.0%
! CAGAAATAACTTTCAAAACT+AGG + chr4.3:25441650-25441669 None:intergenic 25.0%
! GAAATGATTCTCAAACATTT+AGG - chr4.3:25441920-25441939 MS.gene47556:intron 25.0%
! TAAGAGCTTTCAATAGTTTA+GGG + chr4.3:25442976-25442995 None:intergenic 25.0%
! TAGCTAGACAAATTAACAAA+TGG + chr4.3:25442089-25442108 None:intergenic 25.0%
!! GAGATAACTTAATGTGATTT+TGG + chr4.3:25442167-25442186 None:intergenic 25.0%
!! GGTTTTTGTATCTTTAATGT+AGG + chr4.3:25442241-25442260 None:intergenic 25.0%
!!! AGTCCTAACATTCTAAAATA+AGG - chr4.3:25441545-25441564 MS.gene47556:intron 25.0%
!!! GTCCTAACATTCTAAAATAA+GGG - chr4.3:25441546-25441565 MS.gene47556:intron 25.0%
!!! TCTTTATATATTTTGACTGC+AGG - chr4.3:25441751-25441770 MS.gene47556:intron 25.0%
AAAACTTAATGCACTACTGT+AGG + chr4.3:25441582-25441601 None:intergenic 30.0%
AAACTTAATGCACTACTGTA+GGG + chr4.3:25441581-25441600 None:intergenic 30.0%
AAAGATATCAATGGCATCAA+GGG - chr4.3:25442760-25442779 MS.gene47556:intron 30.0%
AAGAAATGGCTAACTATACT+TGG - chr4.3:25442663-25442682 MS.gene47556:intron 30.0%
AATCATATACCAAAAGACCA+AGG + chr4.3:25441947-25441966 None:intergenic 30.0%
ACTTAAATGGACAACAGAAA+AGG - chr4.3:25441696-25441715 MS.gene47556:intron 30.0%
ATCATATACCAAAAGACCAA+GGG + chr4.3:25441946-25441965 None:intergenic 30.0%
CAGAGGATAATAAAGATTTG+AGG - chr4.3:25441282-25441301 MS.gene47556:CDS 30.0%
CCATATCATATCATATCAGA+TGG - chr4.3:25442502-25442521 MS.gene47556:intron 30.0%
CCATCTGATATGATATGATA+TGG + chr4.3:25442505-25442524 None:intergenic 30.0%
CTAAGAGCTTTCAATAGTTT+AGG + chr4.3:25442977-25442996 None:intergenic 30.0%
CTTAAATGGACAACAGAAAA+GGG - chr4.3:25441697-25441716 MS.gene47556:intron 30.0%
GAAACAGACAAATCCTATAT+TGG - chr4.3:25442196-25442215 MS.gene47556:intron 30.0%
GGAGAATGAAACCAAAAATT+AGG + chr4.3:25441520-25441539 None:intergenic 30.0%
GTTGGGGGAAAAAAATTATT+TGG + chr4.3:25442019-25442038 None:intergenic 30.0%
TATGCATGGTCAAATATGAA+AGG + chr4.3:25443061-25443080 None:intergenic 30.0%
TCATGTTGTCATATACTGTT+TGG - chr4.3:25442350-25442369 MS.gene47556:intron 30.0%
TCTCTGTTATTCTGTAAAGT+TGG + chr4.3:25441869-25441888 None:intergenic 30.0%
TGATTGTTTGAATTGTTGAG+AGG + chr4.3:25441022-25441041 None:intergenic 30.0%
TTACTTCTACAAAGCAATCA+TGG + chr4.3:25441080-25441099 None:intergenic 30.0%
TTCAAAAGGCTTAACTATAC+AGG - chr4.3:25442841-25442860 MS.gene47556:CDS 30.0%
TTTCTGTTGTCCATTTAAGT+GGG + chr4.3:25441696-25441715 None:intergenic 30.0%
! AATAGTTTAGGGTTCATATC+TGG + chr4.3:25442965-25442984 None:intergenic 30.0%
! GGATTGGAAATTTGGAATAA+AGG + chr4.3:25441499-25441518 None:intergenic 30.0%
! TTTTAATAGCATCAAAGCCA+GGG - chr4.3:25441234-25441253 MS.gene47556:CDS 30.0%
! TTTTCTGTTGTCCATTTAAG+TGG + chr4.3:25441697-25441716 None:intergenic 30.0%
!! ATTTTAATAGCATCAAAGCC+AGG - chr4.3:25441233-25441252 MS.gene47556:CDS 30.0%
!! GTTTTGACATCATTGATATC+AGG - chr4.3:25441597-25441616 MS.gene47556:intron 30.0%
!! TAATGTTAGCTCTTTTGTCA+TGG + chr4.3:25442043-25442062 None:intergenic 30.0%
!!! AGGTTTTGAAACTATAAGGA+AGG - chr4.3:25441310-25441329 MS.gene47556:CDS 30.0%
!!! ATTTTAGAATGTTAGGACTC+AGG + chr4.3:25441544-25441563 None:intergenic 30.0%
!!! TGCCCTTATTTTAGAATGTT+AGG + chr4.3:25441551-25441570 None:intergenic 30.0%
!!! TGGAAGGTTTTGAAACTATA+AGG - chr4.3:25441306-25441325 MS.gene47556:CDS 30.0%
AAAATCTTGAACCAGTGACT+TGG + chr4.3:25443152-25443171 None:intergenic 35.0%
AAAGGAGTAGTTGCATCAAA+TGG + chr4.3:25443043-25443062 None:intergenic 35.0%
AAATCCTGAAAATGAGGTTG+AGG + chr4.3:25441175-25441194 None:intergenic 35.0%
AACCAGAAATCCTGAAAATG+AGG + chr4.3:25441181-25441200 None:intergenic 35.0%
AAGGAGTAGTTGCATCAAAT+GGG + chr4.3:25443042-25443061 None:intergenic 35.0%
AATAAAGATTTGAGGGTGGA+AGG - chr4.3:25441290-25441309 MS.gene47556:CDS 35.0%
AATACGCTAGACATTGTTAC+AGG - chr4.3:25442120-25442139 MS.gene47556:intron 35.0%
AATGAGCAAATCCAATTGTG+TGG + chr4.3:25442889-25442908 None:intergenic 35.0%
AATTGCAAGAATATCTGCAC+AGG + chr4.3:25441375-25441394 None:intergenic 35.0%
AGAGTGACTGTTTCATACAA+GGG - chr4.3:25442298-25442317 MS.gene47556:intron 35.0%
AGTTTAGTGAAAGTTGTGAG+AGG - chr4.3:25443226-25443245 MS.gene47556:CDS 35.0%
ATGAGCAAATCCAATTGTGT+GGG + chr4.3:25442888-25442907 None:intergenic 35.0%
ATGGGATGGAAAGATATCAA+TGG - chr4.3:25442751-25442770 MS.gene47556:intron 35.0%
CTCTTAACCAGTACCAATAT+AGG + chr4.3:25442212-25442231 None:intergenic 35.0%
CTGTGTTTCCACCAAAATTT+GGG + chr4.3:25443009-25443028 None:intergenic 35.0%
GAAAGATATCAATGGCATCA+AGG - chr4.3:25442759-25442778 MS.gene47556:intron 35.0%
GACAAATCCTATATTGGTAC+TGG - chr4.3:25442202-25442221 MS.gene47556:intron 35.0%
GACTTGTAAGATTAAGAAGC+AGG + chr4.3:25442446-25442465 None:intergenic 35.0%
GCAAGTTACCATAATATGCA+TGG + chr4.3:25443075-25443094 None:intergenic 35.0%
GGATAATAAAGATTTGAGGG+TGG - chr4.3:25441286-25441305 MS.gene47556:CDS 35.0%
GTTTAGTGAAAGTTGTGAGA+GGG - chr4.3:25443227-25443246 MS.gene47556:CDS 35.0%
TCTGTGTTTCCACCAAAATT+TGG + chr4.3:25443010-25443029 None:intergenic 35.0%
TTCAAACAATCACCTGTTTC+TGG - chr4.3:25441030-25441049 MS.gene47556:CDS 35.0%
! AGAATGTACTGCCCAAATTT+TGG - chr4.3:25442995-25443014 MS.gene47556:intron 35.0%
! ATTATGGTAACTTGCAGAAC+AGG - chr4.3:25443080-25443099 MS.gene47556:intron 35.0%
! TAAGAAGCAGGTGTTGTAAT+TGG + chr4.3:25442434-25442453 None:intergenic 35.0%
! TTTAGGGTTCATATCTGGAT+CGG + chr4.3:25442960-25442979 None:intergenic 35.0%
! TTTTCCTCAACCTCATTTTC+AGG - chr4.3:25441168-25441187 MS.gene47556:CDS 35.0%
!! AACCTCATTTTCAGGATTTC+TGG - chr4.3:25441176-25441195 MS.gene47556:CDS 35.0%
!! ACTGGTTCAAGATTTTGCAA+AGG - chr4.3:25443156-25443175 MS.gene47556:CDS 35.0%
!! GATTTTGATGAGCTCATCAA+CGG + chr4.3:25442816-25442835 None:intergenic 35.0%
ACCCTATTACCAAGTGAAGA+AGG - chr4.3:25442724-25442743 MS.gene47556:intron 40.0%
AGGAGTAGTTGCATCAAATG+GGG + chr4.3:25443041-25443060 None:intergenic 40.0%
AGGCTTAACTATACAGGACA+TGG - chr4.3:25442847-25442866 MS.gene47556:CDS 40.0%
ATATCAATGGCATCAAGGGT+AGG - chr4.3:25442764-25442783 MS.gene47556:intron 40.0%
CAGAGTGACTGTTTCATACA+AGG - chr4.3:25442297-25442316 MS.gene47556:intron 40.0%
CCATATTTGGCCCACTTAAA+TGG - chr4.3:25441683-25441702 MS.gene47556:intron 40.0%
CCATTTAAGTGGGCCAAATA+TGG + chr4.3:25441686-25441705 None:intergenic 40.0%
CCCTATTACCAAGTGAAGAA+GGG - chr4.3:25442725-25442744 MS.gene47556:intron 40.0%
CGTAGTAATTAACGCTAAGC+TGG + chr4.3:25440957-25440976 None:intergenic 40.0%
CTACAAAGCAATCATGGAAG+AGG + chr4.3:25441074-25441093 None:intergenic 40.0%
GGTTTGAATGAGTGAATGCA+GGG - chr4.3:25441197-25441216 MS.gene47556:CDS 40.0%
TAGTATGTCATGTGTGACAC+AGG - chr4.3:25442694-25442713 MS.gene47556:intron 40.0%
TATAAGGAAGGCCAAAGAAG+TGG - chr4.3:25441322-25441341 MS.gene47556:CDS 40.0%
TATCAATGGCATCAAGGGTA+GGG - chr4.3:25442765-25442784 MS.gene47556:intron 40.0%
TGGTTTGAATGAGTGAATGC+AGG - chr4.3:25441196-25441215 MS.gene47556:CDS 40.0%
TTAGAATGTTAGGACTCAGG+AGG + chr4.3:25441541-25441560 None:intergenic 40.0%
TTAGGGTTCATATCTGGATC+GGG + chr4.3:25442959-25442978 None:intergenic 40.0%
TTCTACCTGTGGACAAGATT+TGG + chr4.3:25440980-25440999 None:intergenic 40.0%
TTCTCAAACATTTAGGCCCT+TGG - chr4.3:25441927-25441946 MS.gene47556:intron 40.0%
! AGCAAGAGATTTTGTGCACT+TGG - chr4.3:25441397-25441416 MS.gene47556:CDS 40.0%
! AGCTCTTTTGTCATGGTGTT+GGG + chr4.3:25442036-25442055 None:intergenic 40.0%
! ATGTACTGCCCAAATTTTGG+TGG - chr4.3:25442998-25443017 MS.gene47556:intron 40.0%
! CCCTTCTTCACTTGGTAATA+GGG + chr4.3:25442728-25442747 None:intergenic 40.0%
! CTTTTTCTCCACCACTTCTT+TGG + chr4.3:25441336-25441355 None:intergenic 40.0%
! TAGCTCTTTTGTCATGGTGT+TGG + chr4.3:25442037-25442056 None:intergenic 40.0%
! TCCCTTCTTCACTTGGTAAT+AGG + chr4.3:25442729-25442748 None:intergenic 40.0%
!! TTAGCTTTGCATGCAACTGT+TGG - chr4.3:25441141-25441160 MS.gene47556:CDS 40.0%
ACCAAGTGAAGAAGGGAAGA+TGG - chr4.3:25442732-25442751 MS.gene47556:intron 45.0%
ATCAACGGTTGAGTTTGCAC+GGG + chr4.3:25442801-25442820 None:intergenic 45.0%
ATCATGGAAGAGGAGACGAA+TGG + chr4.3:25441064-25441083 None:intergenic 45.0%
CATCAACGGTTGAGTTTGCA+CGG + chr4.3:25442802-25442821 None:intergenic 45.0%
CCAAGTGAAGAAGGGAAGAT+GGG - chr4.3:25442733-25442752 MS.gene47556:intron 45.0%
CTCTACAATTACCGAGGCAA+GGG - chr4.3:25442929-25442948 MS.gene47556:CDS 45.0%
GTTGTGAGAGGGAAAAAGCA+CGG - chr4.3:25443238-25443257 MS.gene47556:CDS 45.0%
TAATTAACGCTAAGCTGGCG+AGG + chr4.3:25440952-25440971 None:intergenic 45.0%
TCTACAATTACCGAGGCAAG+GGG - chr4.3:25442930-25442949 MS.gene47556:CDS 45.0%
! GGTAACTTGCAGAACAGGAT+GGG - chr4.3:25443085-25443104 MS.gene47556:intron 45.0%
! GTAACTTGCAGAACAGGATG+GGG - chr4.3:25443086-25443105 MS.gene47556:intron 45.0%
! TGGTAACTTGCAGAACAGGA+TGG - chr4.3:25443084-25443103 MS.gene47556:intron 45.0%
! TTGTGAGAGGGAAAAAGCAC+GGG - chr4.3:25443239-25443258 MS.gene47556:CDS 45.0%
!! CATTTAGGCCCTTGGTCTTT+TGG - chr4.3:25441935-25441954 MS.gene47556:intron 45.0%
!! CTCTTTTGTCATGGTGTTGG+GGG + chr4.3:25442034-25442053 None:intergenic 45.0%
!! GCTCTTTTGTCATGGTGTTG+GGG + chr4.3:25442035-25442054 None:intergenic 45.0%
!! GGAGAAAAAGTGTCCTAGTG+TGG - chr4.3:25441346-25441365 MS.gene47556:CDS 45.0%
AAGGAAGGCCAAAGAAGTGG+TGG - chr4.3:25441325-25441344 MS.gene47556:CDS 50.0%
ATGGAAGAGGAGACGAATGG+TGG + chr4.3:25441061-25441080 None:intergenic 50.0%
ATGTCATGTGTGACACAGGC+AGG - chr4.3:25442698-25442717 MS.gene47556:intron 50.0%
CAGGACATGGTTGCTCTTTC+TGG - chr4.3:25442860-25442879 MS.gene47556:CDS 50.0%
CCAACAAGCTGTTCTACCTG+TGG + chr4.3:25440991-25441010 None:intergenic 50.0%
CCACAGGTAGAACAGCTTGT+TGG - chr4.3:25440988-25441007 MS.gene47556:CDS 50.0%
CCCATCTTCCCTTCTTCACT+TGG + chr4.3:25442736-25442755 None:intergenic 50.0%
CCTCTACAATTACCGAGGCA+AGG - chr4.3:25442928-25442947 MS.gene47556:CDS 50.0%
CCTTGCCTCGGTAATTGTAG+AGG + chr4.3:25442931-25442950 None:intergenic 50.0%
CGCTAGACATTGTTACAGGC+TGG - chr4.3:25442124-25442143 MS.gene47556:intron 50.0%
CTACGCCAAATCTTGTCCAC+AGG - chr4.3:25440972-25440991 MS.gene47556:CDS 50.0%
GTGAAGAAGGGAAGATGGGA+TGG - chr4.3:25442737-25442756 MS.gene47556:intron 50.0%
GTGGATCCAATGCCAAAGCT+TGG + chr4.3:25443126-25443145 None:intergenic 50.0%
GTTGGCAGAGAAAGATGCAG+AGG - chr4.3:25441265-25441284 MS.gene47556:CDS 50.0%
TCAACGGTTGAGTTTGCACG+GGG + chr4.3:25442800-25442819 None:intergenic 50.0%
TGCCTCGGTAATTGTAGAGG+CGG + chr4.3:25442928-25442947 None:intergenic 50.0%
TGTCATGTGTGACACAGGCA+GGG - chr4.3:25442699-25442718 MS.gene47556:intron 50.0%
! ATCGGACCAAGCTTTGGCAT+TGG - chr4.3:25443117-25443136 MS.gene47556:intron 50.0%
! CTTTCTGGTGCCCACACAAT+TGG - chr4.3:25442875-25442894 MS.gene47556:CDS 50.0%
! TGTGAGAGGGAAAAAGCACG+GGG - chr4.3:25443240-25443259 MS.gene47556:CDS 50.0%
!! TGAACCAGTGACTTGGTTCG+TGG + chr4.3:25443145-25443164 None:intergenic 50.0%
AAAGCCAGGGAGCAAGGAGT+TGG - chr4.3:25441247-25441266 MS.gene47556:CDS 55.0%
AAGAGGAGACGAATGGTGGC+TGG + chr4.3:25441057-25441076 None:intergenic 55.0%
ACCCGCCTCTACAATTACCG+AGG - chr4.3:25442923-25442942 MS.gene47556:CDS 55.0%
AGCATCAAAGCCAGGGAGCA+AGG - chr4.3:25441241-25441260 MS.gene47556:CDS 55.0%
CAACGGTTGAGTTTGCACGG+GGG + chr4.3:25442799-25442818 None:intergenic 55.0%
CAGGATGGGGTTGCTAGCAT+CGG - chr4.3:25443099-25443118 MS.gene47556:intron 55.0%
GCCTCGGTAATTGTAGAGGC+GGG + chr4.3:25442927-25442946 None:intergenic 55.0%
GGATCCACGAACCAAGTCAC+TGG - chr4.3:25443138-25443157 MS.gene47556:CDS 55.0%
GTCATGTGTGACACAGGCAG+GGG - chr4.3:25442700-25442719 MS.gene47556:intron 55.0%
TCATGTGTGACACAGGCAGG+GGG - chr4.3:25442701-25442720 MS.gene47556:intron 55.0%
TCTGCACAGGACACCACACT+AGG + chr4.3:25441362-25441381 None:intergenic 55.0%
TGAGTTTGCACGGGGGATGT+TGG + chr4.3:25442792-25442811 None:intergenic 55.0%
! ATGGTGGCTGGTCCAGAAAC+AGG + chr4.3:25441045-25441064 None:intergenic 55.0%
! GCTAGCATCGGACCAAGCTT+TGG - chr4.3:25443111-25443130 MS.gene47556:intron 55.0%
! GGAAAAAGCACGGGGAGAGA+AGG - chr4.3:25443248-25443267 MS.gene47556:CDS 55.0%
TATGTGTGTGCGCGCGTGTG+TGG + chr4.3:25441110-25441129 None:intergenic 60.0%
TCTGCCAACTCCTTGCTCCC+TGG + chr4.3:25441254-25441273 None:intergenic 60.0%
TGTGCGCGCGTGTGTGGAAT+TGG + chr4.3:25441104-25441123 None:intergenic 60.0%
! GATCGGGTTGCCCCTTGCCT+CGG + chr4.3:25442943-25442962 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 25440922 25443294 25440922 ID=MS.gene47556
chr4.3 mRNA 25440922 25443294 25440922 ID=MS.gene47556.t1;Parent=MS.gene47556
chr4.3 exon 25443121 25443294 25443121 ID=MS.gene47556.t1.exon1;Parent=MS.gene47556.t1
chr4.3 CDS 25443121 25443294 25443121 ID=cds.MS.gene47556.t1;Parent=MS.gene47556.t1
chr4.3 exon 25442798 25442998 25442798 ID=MS.gene47556.t1.exon2;Parent=MS.gene47556.t1
chr4.3 CDS 25442798 25442998 25442798 ID=cds.MS.gene47556.t1;Parent=MS.gene47556.t1
chr4.3 exon 25440922 25441500 25440922 ID=MS.gene47556.t1.exon3;Parent=MS.gene47556.t1
chr4.3 CDS 25440922 25441500 25440922 ID=cds.MS.gene47556.t1;Parent=MS.gene47556.t1
Gene Sequence

>MS.gene47556

ATGCTTAATAGCAAAACTACACGCATTCCTCGCCAGCTTAGCGTTAATTACTACGCCAAATCTTGTCCACAGGTAGAACAGCTTGTTGGTTCAGTCACCTCTCAACAATTCAAACAATCACCTGTTTCTGGACCAGCCACCATTCGTCTCCTCTTCCATGATTGCTTTGTAGAAGTAAGCCAATTCCACACACGCGCGCACACACATATATAAATGTTTTTAGCTTTGCATGCAACTGTTGGTTTGTTTTCCTCAACCTCATTTTCAGGATTTCTGGTTTGAATGAGTGAATGCAGGGTTGTGATGCATCAATTTTAATAGCATCAAAGCCAGGGAGCAAGGAGTTGGCAGAGAAAGATGCAGAGGATAATAAAGATTTGAGGGTGGAAGGTTTTGAAACTATAAGGAAGGCCAAAGAAGTGGTGGAGAAAAAGTGTCCTAGTGTGGTGTCCTGTGCAGATATTCTTGCAATTGCAGCAAGAGATTTTGTGCACTTGGTAAGTTACTTGTTCATTGTTTCAATTTCATATATCATGATTACCACTAATTTGATTTAATATATCTTCATCTGTTTCCTTTATTCCAAATTTCCAATCCTAATTTTTGGTTTCATTCTCCTCCTGAGTCCTAACATTCTAAAATAAGGGCAGTTAATGCCCTACAGTAGTGCATTAAGTTTTGACATCATTGATATCAGGTCACATGCAATACAAGTGCAAAGTATCCCTAGTTTTGAAAGTTATTTCTGATTTTTGATGTAACCATATTTGGCCCACTTAAATGGACAACAGAAAAGGGCAGAAACTAATTAAAATTTAAAAGTTGTGAATCTTTATATATTTTGACTGCAGGCTCAATTTTTTCTTACATGTTCTTTTGCTGCATCTTTTTTGTTTCTTAGATAGCAGCTAGAAGAATACATTTCTAGATAAAATATGTGTTTTCCAACTTTACAGAATAACAGAGACGCTTTGTGAAAATACCAATTCAAATAAAAAGAAATGATTCTCAAACATTTAGGCCCTTGGTCTTTTGGTATATGATTATGAATAGGAAAATAGATTTCTTTATTATAATGTAAAAAGACAACATAGCCAAATAATTTTTTTCCCCCAACACCATGACAAAAGAGCTAACATTATATTGTAGAATAAATTAATCTTTCCATTTGTTAATTTGTCTAGCTAAAATGACACAGAATACGCTAGACATTGTTACAGGCTGGTGTTGATTCTATTTTAACCAAAATCACATTAAGTTATCTCTAGAGATTAGAAACAGACAAATCCTATATTGGTACTGGTTAAGAGCTTTTTCCTACATTAAAGATACAAAAACCCCACACTATAATATTAATTGTAGTTTTGGCAGTTAGCAGAGTGACTGTTTCATACAAGGGCTCTGCATAAAGTCAAATTGAATCTGTTTTCATGTTGTCATATACTGTTTGGTATATTAGACTATAAAACAGCCGAATTTTTGTACTCTATGTTGAATTTTATTTAGACACCAATTACAACACCTGCTTCTTAATCTTACAAGTCCAAGTCCAATTTTCAGTATTATTGTTCTTTTCTATGCCATATCATATCATATCAGATGGATAGATACATGTAGCAACTTAACACTATGAAAGAATAAAAAAGTTCAATTAAAGAAACCAAATAAAAACTAAAAACAAAACACTATTACTTTCTGTTAAGAAATGGATAATTATGTTGAGTTTATATTATGTTCTGTTAAGAAATGGCTAACTATACTTGGTTTAATTTTAGTATGTCATGTGTGACACAGGCAGGGGGACCCTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTAGGGTCCAACATCCCCCGTGCAAACTCAACCGTTGATGAGCTCATCAAAATCTTCAATTCAAAAGGCTTAACTATACAGGACATGGTTGCTCTTTCTGGTGCCCACACAATTGGATTTGCTCATTGCAAGAGCTTTTTGACCCGCCTCTACAATTACCGAGGCAAGGGGCAACCCGATCCAGATATGAACCCTAAACTATTGAAAGCTCTTAGAATGTACTGCCCAAATTTTGGTGGAAACACAGACATTGTTGCCCCATTTGATGCAACTACTCCTTTCATATTTGACCATGCATATTATGGTAACTTGCAGAACAGGATGGGGTTGCTAGCATCGGACCAAGCTTTGGCATTGGATCCACGAACCAAGTCACTGGTTCAAGATTTTGCAAAGGATAAACAAAAGTTTTTTCAAGCTTTTGCATCTGCTATAGACAAAATGAGTTTAGTGAAAGTTGTGAGAGGGAAAAAGCACGGGGAGAGAAGGAGAGATTGTAGCATGCATATGTGA
Protein sequence

>MS.gene47556.t1

MLNSKTTRIPRQLSVNYYAKSCPQVEQLVGSVTSQQFKQSPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRVEGFETIRKAKEVVEKKCPSVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTVDELIKIFNSKGLTIQDMVALSGAHTIGFAHCKSFLTRLYNYRGKGQPDPDMNPKLLKALRMYCPNFGGNTDIVAPFDATTPFIFDHAYYGNLQNRMGLLASDQALALDPRTKSLVQDFAKDKQKFFQAFASAIDKMSLVKVVRGKKHGERRRDCSMHM