AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57807


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57807.t1 MTR_6g078380 93.736 447 28 0 13 459 76 522 0.0 858
MS.gene57807.t1 MTR_6g078450 83.973 443 70 1 13 455 76 517 0.0 802
MS.gene57807.t1 MTR_6g078330 76.734 447 103 1 13 459 77 522 0.0 728
MS.gene57807.t1 MTR_6g078450 84.334 383 59 1 13 395 76 457 0.0 694
MS.gene57807.t1 MTR_6g078330 77.088 419 95 1 41 459 1 418 0.0 687
MS.gene57807.t1 MTR_2g098520 70.805 435 126 1 16 450 77 510 0.0 665
MS.gene57807.t1 MTR_2g098790 69.816 434 130 1 16 449 81 513 0.0 655
MS.gene57807.t1 MTR_2g098540 69.885 435 130 1 16 450 74 507 0.0 655
MS.gene57807.t1 MTR_2g098540 69.885 435 130 1 16 450 30 463 0.0 653
MS.gene57807.t1 MTR_3g028720 69.037 436 134 1 16 451 81 515 0.0 653
MS.gene57807.t1 MTR_6g078330 75.184 407 98 2 53 459 15 418 0.0 649
MS.gene57807.t1 MTR_4g066580 68.578 436 136 1 16 451 82 516 0.0 647
MS.gene57807.t1 MTR_4g066340 68.506 435 136 1 15 449 5 438 0.0 639
MS.gene57807.t1 MTR_4g066210 67.512 434 140 1 16 449 86 518 0.0 638
MS.gene57807.t1 MTR_4g066240 67.051 434 142 1 16 449 79 511 0.0 636
MS.gene57807.t1 MTR_4g066630 66.968 442 145 1 17 458 83 523 0.0 634
MS.gene57807.t1 MTR_4g066590 68.276 435 137 1 17 451 77 510 0.0 633
MS.gene57807.t1 MTR_4g066240 66.897 435 142 2 16 449 79 512 0.0 631
MS.gene57807.t1 MTR_4g066640 65.138 436 147 3 16 450 82 513 0.0 610
MS.gene57807.t1 MTR_5g071520 67.117 444 136 2 16 450 82 524 0.0 610
MS.gene57807.t1 MTR_4g066330 64.531 437 128 3 16 451 84 494 0.0 587
MS.gene57807.t1 MTR_4g066280 62.989 435 134 3 16 449 84 492 0.0 575
MS.gene57807.t1 MTR_3g028720 69.737 380 114 1 16 395 81 459 0.0 572
MS.gene57807.t1 MTR_3g026280 60.920 435 164 2 16 450 65 493 0.0 555
MS.gene57807.t1 MTR_4g066630 67.196 378 123 1 17 394 83 459 0.0 549
MS.gene57807.t1 MTR_4g023000 59.497 437 170 3 13 449 64 493 0.0 543
MS.gene57807.t1 MTR_3g028720 71.802 344 96 1 16 359 81 423 0.0 530
MS.gene57807.t1 MTR_4g066580 70.402 348 102 1 16 363 82 428 0.0 525
MS.gene57807.t1 MTR_4g066630 69.388 343 104 1 17 359 83 424 0.0 513
MS.gene57807.t1 MTR_3g026400 55.760 434 185 4 16 448 49 476 1.03e-178 509
MS.gene57807.t1 MTR_3g026400 55.760 434 185 4 16 448 80 507 1.50e-178 509
MS.gene57807.t1 MTR_4g066240 66.570 344 114 1 16 359 79 421 4.57e-176 500
MS.gene57807.t1 MTR_4g015420 54.730 444 163 4 17 449 108 524 7.35e-174 498
MS.gene57807.t1 MTR_2g043200 56.522 437 158 5 18 449 109 518 3.46e-173 496
MS.gene57807.t1 MTR_6g078330 76.490 302 70 1 13 314 77 377 1.77e-172 489
MS.gene57807.t1 MTR_4g067040 69.486 331 100 1 17 347 78 407 2.57e-171 487
MS.gene57807.t1 MTR_4g083000 54.943 435 191 4 17 449 71 502 1.17e-169 487
MS.gene57807.t1 MTR_5g044000 55.125 439 191 5 13 448 85 520 1.27e-167 482
MS.gene57807.t1 MTR_3g026620 54.734 433 191 3 16 448 81 508 1.32e-167 482
MS.gene57807.t1 MTR_3g028720 71.661 307 86 1 16 322 81 386 1.77e-167 477
MS.gene57807.t1 MTR_4g015460 54.176 443 166 6 18 450 86 501 6.13e-166 477
MS.gene57807.t1 MTR_4g067040 71.242 306 87 1 17 322 78 382 9.27e-163 465
MS.gene57807.t1 MTR_0110s0040 52.765 434 198 5 18 451 87 513 4.00e-160 462
MS.gene57807.t1 MTR_4g081530 52.027 444 206 4 17 455 67 508 1.52e-158 459
MS.gene57807.t1 MTR_4g066630 69.231 299 91 1 17 315 83 380 1.47e-157 451
MS.gene57807.t1 MTR_0110s0030 51.843 434 202 5 18 451 87 513 3.68e-157 455
MS.gene57807.t1 MTR_4g083000 54.745 411 181 4 41 449 1 408 1.25e-156 450
MS.gene57807.t1 MTR_4g066640 65.385 312 103 3 16 326 82 389 1.93e-151 436
MS.gene57807.t1 MTR_3g033790 47.575 433 213 4 17 449 62 480 2.01e-144 422
MS.gene57807.t1 MTR_3g033810 48.276 435 208 5 17 449 64 483 4.85e-143 418
MS.gene57807.t1 MTR_4g131810 47.806 433 222 4 18 448 73 503 4.92e-143 419
MS.gene57807.t1 MTR_2g022760 45.964 446 236 5 16 459 79 521 2.74e-137 405
MS.gene57807.t1 MTR_2g079580 43.880 433 240 3 18 450 76 505 4.92e-133 394
MS.gene57807.t1 MTR_2g079550 44.548 431 236 3 18 448 74 501 1.83e-132 393
MS.gene57807.t1 MTR_2g022710 45.000 440 235 7 18 454 79 514 3.10e-132 392
MS.gene57807.t1 MTR_4g131800 47.126 435 223 7 20 451 562 992 2.13e-131 405
MS.gene57807.t1 MTR_7g068910 44.907 432 224 4 21 451 78 496 1.35e-125 375
MS.gene57807.t1 MTR_4g016920 43.418 433 229 5 21 451 74 492 1.07e-124 372
MS.gene57807.t1 MTR_7g033860 44.444 423 219 6 28 448 103 511 2.19e-123 369
MS.gene57807.t1 MTR_2g022760 44.418 421 229 5 41 459 1 418 3.32e-123 365
MS.gene57807.t1 MTR_7g068910 43.891 442 224 5 21 451 78 506 2.18e-122 367
MS.gene57807.t1 MTR_3g026400 60.727 275 105 2 16 290 80 351 2.87e-122 361
MS.gene57807.t1 MTR_0108s0030 42.105 456 226 6 1 448 23 448 4.14e-121 361
MS.gene57807.t1 MTR_2g022710 43.750 416 229 5 41 454 1 413 1.48e-120 358
MS.gene57807.t1 MTR_5g068740 43.155 431 226 7 23 449 74 489 2.35e-119 358
MS.gene57807.t1 MTR_1g088610 42.424 429 231 5 23 449 74 488 7.51e-117 356
MS.gene57807.t1 MTR_1g088610 32.639 144 74 3 323 449 476 613 2.86e-16 81.6
MS.gene57807.t1 MTR_7g068900 43.675 419 219 5 36 451 17 421 1.13e-116 351
MS.gene57807.t1 MTR_7g051610 43.560 427 225 6 28 452 123 535 5.65e-115 348
MS.gene57807.t1 MTR_4g016920 42.615 413 221 5 41 451 1 399 2.58e-114 343
MS.gene57807.t1 MTR_7g051650 43.839 422 224 5 28 448 119 528 4.41e-113 343
MS.gene57807.t1 MTR_7g051650 43.839 422 224 5 28 448 123 532 4.96e-113 343
MS.gene57807.t1 MTR_7g051510 42.129 451 244 8 1 448 95 531 2.16e-112 342
MS.gene57807.t1 MTR_2g022710 43.947 380 208 5 18 395 79 455 3.06e-108 328
MS.gene57807.t1 MTR_2g022710 43.947 380 208 5 18 395 79 455 5.66e-108 328
MS.gene57807.t1 MTR_2g079580 45.322 342 185 2 18 359 76 415 8.10e-108 326
MS.gene57807.t1 MTR_0110s0040 52.013 298 139 3 18 315 87 380 3.71e-107 324
MS.gene57807.t1 MTR_7g056747 41.429 420 219 5 35 453 9 402 2.07e-105 319
MS.gene57807.t1 MTR_1g088630 41.014 434 206 9 23 449 42 432 2.96e-105 320
MS.gene57807.t1 MTR_2g022710 45.481 343 184 3 18 359 79 419 5.30e-104 316
MS.gene57807.t1 MTR_2g022710 44.985 329 178 3 18 345 79 405 3.63e-98 301
MS.gene57807.t1 MTR_2g022710 46.405 306 161 3 18 322 79 382 8.53e-92 285
MS.gene57807.t1 MTR_4g016920 48.718 273 138 1 41 313 1 271 5.03e-90 276
MS.gene57807.t1 MTR_1g088630 47.232 271 116 4 23 292 74 318 5.35e-81 255
MS.gene57807.t1 MTR_1g088630 51.835 218 102 2 23 239 74 289 5.24e-73 232
MS.gene57807.t1 MTR_0110s0020 55.978 184 78 2 18 201 87 267 2.96e-69 223
MS.gene57807.t1 MTR_5g069350 45.810 179 43 7 287 449 48 188 7.03e-34 126
MS.gene57807.t1 MTR_4g122980 24.694 409 236 11 37 440 183 524 1.27e-25 110
MS.gene57807.t1 MTR_8g038650 42.373 118 58 1 187 294 35 152 1.36e-23 97.1
MS.gene57807.t1 MTR_4g061170 54.717 53 22 1 385 435 12 64 8.08e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57807.t1 AT5G44640 55.835 437 186 3 16 451 74 504 0.0 519
MS.gene57807.t1 AT5G42260 57.209 430 177 3 16 444 74 497 0.0 517
MS.gene57807.t1 AT2G44450 55.046 436 190 2 16 451 74 503 2.58e-180 514
MS.gene57807.t1 AT2G44480 52.874 435 203 2 16 450 78 510 2.23e-175 502
MS.gene57807.t1 AT3G60130 55.862 435 185 3 16 449 73 501 5.25e-175 501
MS.gene57807.t1 AT2G44480 52.874 435 203 2 16 450 109 541 6.39e-175 502
MS.gene57807.t1 AT3G60130 55.529 416 178 3 35 449 40 449 3.70e-168 481
MS.gene57807.t1 AT2G44480 52.683 410 192 2 41 450 1 408 8.93e-166 473
MS.gene57807.t1 AT1G47600 53.456 434 192 4 16 448 85 509 1.15e-165 477
MS.gene57807.t1 AT1G47600 52.995 434 193 4 16 448 85 508 1.30e-164 474
MS.gene57807.t1 AT1G51470 53.456 434 192 4 16 448 85 509 1.52e-164 474
MS.gene57807.t1 AT1G26560 53.687 434 197 3 17 448 75 506 7.69e-164 472
MS.gene57807.t1 AT2G25630 52.860 437 182 4 16 451 73 486 3.21e-163 470
MS.gene57807.t1 AT5G24550 50.812 431 207 5 23 449 81 510 2.62e-160 464
MS.gene57807.t1 AT5G54570 51.613 434 206 3 17 448 74 505 1.15e-159 462
MS.gene57807.t1 AT3G60140 49.425 435 216 4 23 454 75 508 2.67e-159 463
MS.gene57807.t1 AT3G60130 53.606 416 175 4 35 449 40 438 5.39e-159 457
MS.gene57807.t1 AT3G18080 51.818 440 206 4 11 450 76 509 3.69e-157 455
MS.gene57807.t1 AT3G60120 51.039 433 205 6 22 450 62 491 2.64e-154 449
MS.gene57807.t1 AT5G24540 51.270 433 204 6 23 450 81 511 6.37e-154 447
MS.gene57807.t1 AT3G18070 49.206 441 208 7 11 450 67 492 3.26e-151 439
MS.gene57807.t1 AT5G54570 51.707 410 194 3 41 448 1 408 1.53e-150 436
MS.gene57807.t1 AT3G18070 49.206 441 214 7 11 450 67 498 2.63e-150 437
MS.gene57807.t1 AT2G44460 49.770 434 211 6 22 451 77 507 4.93e-149 437
MS.gene57807.t1 AT5G25980 50.000 434 208 8 20 449 95 523 5.14e-149 436
MS.gene57807.t1 AT2G44470 47.018 436 225 5 22 453 77 510 1.03e-148 436
MS.gene57807.t1 AT5G26000 50.691 434 204 6 20 448 83 511 2.93e-145 426
MS.gene57807.t1 AT5G36890 48.402 438 213 4 13 449 55 480 4.35e-145 424
MS.gene57807.t1 AT5G36890 48.402 438 213 4 13 449 55 480 5.06e-145 423
MS.gene57807.t1 AT2G44490 47.608 439 221 7 17 449 58 493 2.89e-142 419
MS.gene57807.t1 AT2G44450 52.793 358 163 2 94 451 1 352 3.93e-140 406
MS.gene57807.t1 AT2G32860 45.909 440 231 6 16 451 137 573 4.33e-137 407
MS.gene57807.t1 AT3G21370 47.465 434 218 7 23 449 82 512 4.35e-136 402
MS.gene57807.t1 AT2G32860 45.455 440 234 5 16 451 137 574 1.55e-135 404
MS.gene57807.t1 AT5G54570 50.526 380 185 2 17 395 74 451 5.06e-135 397
MS.gene57807.t1 AT3G09260 46.544 434 225 6 23 452 84 514 7.72e-135 399
MS.gene57807.t1 AT1G75940 46.682 437 219 8 23 449 86 518 1.03e-133 396
MS.gene57807.t1 AT1G61820 45.890 438 232 5 17 452 74 508 1.81e-133 395
MS.gene57807.t1 AT3G03640 45.958 433 225 6 23 449 84 513 2.18e-133 395
MS.gene57807.t1 AT1G66280 48.046 435 216 7 23 452 85 514 2.50e-132 392
MS.gene57807.t1 AT4G21760 42.889 450 247 6 10 457 90 531 5.46e-132 392
MS.gene57807.t1 AT1G66270 47.586 435 218 7 23 452 85 514 6.27e-132 391
MS.gene57807.t1 AT1G61810 44.749 438 237 5 17 452 77 511 4.63e-131 389
MS.gene57807.t1 AT5G25980 50.000 378 182 6 20 395 95 467 4.67e-130 384
MS.gene57807.t1 AT5G25980 50.000 378 182 6 20 395 95 467 4.67e-130 384
MS.gene57807.t1 AT1G52400 46.560 436 217 9 23 449 88 516 7.92e-130 386
MS.gene57807.t1 AT1G52400 46.560 436 217 9 23 449 88 516 7.92e-130 386
MS.gene57807.t1 AT5G28510 45.103 439 229 7 23 452 88 523 4.40e-129 384
MS.gene57807.t1 AT1G66270 47.356 435 217 8 23 452 85 512 8.03e-129 383
MS.gene57807.t1 AT5G26000 50.923 379 178 4 20 395 83 456 3.68e-128 379
MS.gene57807.t1 AT4G27830 45.227 440 222 7 23 458 71 495 4.20e-128 381
MS.gene57807.t1 AT1G02850 44.884 430 216 6 24 449 74 486 1.46e-126 377
MS.gene57807.t1 AT5G24540 49.734 376 183 5 23 394 81 454 1.47e-125 372
MS.gene57807.t1 AT4G21760 42.000 450 241 7 10 457 90 521 6.07e-125 374
MS.gene57807.t1 AT1G61810 44.893 421 227 5 17 435 77 494 8.18e-124 371
MS.gene57807.t1 AT4G27820 44.954 436 223 6 20 452 65 486 1.95e-123 369
MS.gene57807.t1 AT1G02850 42.605 453 216 7 24 449 74 509 7.31e-122 365
MS.gene57807.t1 AT2G44470 45.479 376 200 4 22 394 77 450 8.83e-122 363
MS.gene57807.t1 AT1G61810 44.769 411 222 5 44 452 4 411 1.66e-121 361
MS.gene57807.t1 AT1G02850 42.731 454 215 8 24 449 74 510 1.64e-120 362
MS.gene57807.t1 AT3G60140 48.105 343 175 3 23 363 75 416 1.40e-119 357
MS.gene57807.t1 AT4G27830 44.313 422 216 7 41 458 1 407 6.98e-119 354
MS.gene57807.t1 AT4G22100 43.448 435 228 7 19 449 63 483 6.69e-116 350
MS.gene57807.t1 AT1G02850 43.023 430 197 7 24 449 74 459 1.20e-115 348
MS.gene57807.t1 AT3G62750 43.056 432 224 7 22 452 67 477 1.32e-115 348
MS.gene57807.t1 AT3G62750 43.056 432 224 7 22 452 93 503 5.01e-115 348
MS.gene57807.t1 AT2G44460 48.626 364 180 6 92 451 1 361 3.71e-114 343
MS.gene57807.t1 AT1G60090 42.299 435 231 8 19 449 65 483 7.80e-114 344
MS.gene57807.t1 AT4G27820 44.337 415 214 6 41 452 1 401 1.79e-113 340
MS.gene57807.t1 AT4G27820 44.337 415 214 6 41 452 1 401 1.79e-113 340
MS.gene57807.t1 AT1G45191 42.694 438 233 8 23 456 74 497 6.43e-113 342
MS.gene57807.t1 AT2G44480 57.090 268 113 2 16 283 109 374 8.71e-113 338
MS.gene57807.t1 AT1G45191 42.725 433 224 7 23 451 74 486 1.06e-112 341
MS.gene57807.t1 AT1G45191 42.500 440 236 8 23 456 74 502 1.59e-112 341
MS.gene57807.t1 AT1G45191 42.500 440 236 8 23 456 86 514 2.08e-112 341
MS.gene57807.t1 AT1G60090 41.458 439 236 8 19 449 65 490 3.08e-112 340
MS.gene57807.t1 AT3G62740 40.783 434 233 8 23 452 69 482 1.48e-109 333
MS.gene57807.t1 AT3G18070 50.000 328 158 5 124 450 99 421 2.91e-109 330
MS.gene57807.t1 AT5G48375 42.786 402 158 7 20 413 74 411 2.86e-107 325
MS.gene57807.t1 AT2G44480 48.525 305 155 2 146 450 2 304 8.93e-106 317
MS.gene57807.t1 AT3G62750 41.646 413 219 7 41 452 1 392 5.43e-105 318
MS.gene57807.t1 AT3G62750 41.646 413 219 7 41 452 1 392 5.43e-105 318
MS.gene57807.t1 AT1G52400 45.000 380 194 8 23 394 88 460 8.14e-105 320
MS.gene57807.t1 AT1G61820 43.750 368 203 4 87 452 4 369 2.24e-103 313
MS.gene57807.t1 AT3G18070 49.682 314 152 5 138 450 1 309 4.47e-103 310
MS.gene57807.t1 AT2G44470 48.084 287 145 3 23 307 78 362 1.90e-101 309
MS.gene57807.t1 AT1G02850 44.199 362 165 5 24 359 74 424 1.25e-100 308
MS.gene57807.t1 AT1G51490 49.201 313 146 6 16 326 60 361 2.11e-97 299
MS.gene57807.t1 AT1G61810 44.058 345 189 4 17 359 77 419 3.14e-97 299
MS.gene57807.t1 AT3G18070 47.525 303 152 5 11 312 67 363 8.47e-96 294
MS.gene57807.t1 AT3G62750 42.553 376 195 6 22 397 93 447 2.60e-94 293
MS.gene57807.t1 AT3G62740 41.223 376 198 7 22 394 68 423 2.46e-92 286
MS.gene57807.t1 AT1G60270 49.648 284 135 3 20 303 67 342 1.85e-90 280
MS.gene57807.t1 AT1G45191 45.574 305 158 4 19 320 70 369 8.41e-90 279
MS.gene57807.t1 AT1G45191 46.918 292 147 4 19 307 70 356 2.51e-88 276
MS.gene57807.t1 AT3G62750 47.253 273 133 3 22 294 67 328 5.94e-86 268
MS.gene57807.t1 AT3G62750 47.253 273 133 3 22 294 67 328 5.94e-86 268
MS.gene57807.t1 AT3G62750 47.253 273 133 3 22 294 93 354 5.65e-85 268
MS.gene57807.t1 AT1G60270 49.425 261 124 3 43 303 3 255 3.97e-81 253
MS.gene57807.t1 AT1G61810 50.885 226 109 2 17 242 77 300 2.15e-75 239
MS.gene57807.t1 AT3G18070 46.444 239 125 3 124 361 99 335 4.40e-70 226
MS.gene57807.t1 AT3G18070 45.778 225 119 3 138 361 1 223 4.51e-64 207
MS.gene57807.t1 AT5G16580 38.700 323 168 9 88 405 2 299 2.79e-53 181
MS.gene57807.t1 AT3G06510 26.402 428 241 15 36 457 159 518 2.18e-27 115
MS.gene57807.t1 AT3G06510 26.682 446 251 18 36 457 159 552 5.45e-27 114

Find 96 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTTTGCTTTAAAGAATT+TGG 0.127350 6.1:+69382675 MS.gene57807:CDS
TATCAAGCAAAGCTTGTAAA+AGG 0.202527 6.1:+69384049 MS.gene57807:CDS
TTTCTTACTTGGAAGTATTC+TGG 0.217868 6.1:-69381947 None:intergenic
AGGGATGGTGTCAATGTAAA+AGG 0.242174 6.1:+69385209 MS.gene57807:intron
TTGATCTATATCACTGAAAA+TGG 0.261422 6.1:+69384631 MS.gene57807:CDS
GCCACTCTATGATACAAAAT+TGG 0.298973 6.1:+69383228 MS.gene57807:CDS
TGATTATGAGTCACTATATA+GGG 0.301091 6.1:-69382837 None:intergenic
GAGGAAGGTCCCAATGAAAA+AGG 0.301739 6.1:-69382485 None:intergenic
GATAACTTTGAATGGGGTTT+AGG 0.303875 6.1:+69385254 MS.gene57807:CDS
AAGAATGTATTGCAGGTATA+TGG 0.303911 6.1:+69383952 MS.gene57807:intron
AGAGCCATTGATTTCATGTT+TGG 0.306421 6.1:+69383268 MS.gene57807:CDS
GATGTGAGTTACACTATATT+TGG 0.308617 6.1:-69382543 None:intergenic
TGATGAATACCATCGTTATA+AGG 0.309617 6.1:+69381747 MS.gene57807:CDS
GCCAAGCATGCTTATGTTGA+TGG 0.330838 6.1:+69382744 MS.gene57807:CDS
AGCTTAGTGGAGGTGTAAAT+AGG 0.332322 6.1:+69382310 MS.gene57807:CDS
AAATTTCAAAAGGGCAAGAT+AGG 0.333322 6.1:+69383178 MS.gene57807:CDS
TTACACATGCAGGCTGCTTC+AGG 0.335032 6.1:+69384538 MS.gene57807:intron
TTGATTATGAGTCACTATAT+AGG 0.356386 6.1:-69382838 None:intergenic
TGTCTACAAAACTAAGTATC+AGG 0.359104 6.1:+69382887 MS.gene57807:CDS
TTAGGCTACACTTCGAGGTT+TGG 0.361866 6.1:+69385272 MS.gene57807:CDS
TTGGCAATAGAGTAAAGAAT+TGG 0.368448 6.1:+69382694 MS.gene57807:CDS
CAATCCTTTGTGTATCTTCA+AGG 0.390282 6.1:-69384875 None:intergenic
GATGATCAAGGACATCAATA+TGG 0.390761 6.1:+69381897 MS.gene57807:CDS
GCACATACCGTTGGGCCAAT+AGG 0.395361 6.1:-69384398 None:intergenic
GCTTAGTGGAGGTGTAAATA+GGG 0.402721 6.1:+69382311 MS.gene57807:CDS
GGGTGCATTAGTTGCATAAT+GGG 0.404463 6.1:-69384107 None:intergenic
TTCTTCATATATTCAATGTC+CGG 0.405124 6.1:+69381649 None:intergenic
CAACCTCATCAATGAGTTGC+TGG 0.414002 6.1:+69382353 MS.gene57807:CDS
CATTGGTTGATAACTTTGAA+TGG 0.414624 6.1:+69385246 MS.gene57807:CDS
CGGGTGCATTAGTTGCATAA+TGG 0.417931 6.1:-69384108 None:intergenic
ACACTTGAAGATGAATATAA+TGG 0.421152 6.1:+69382510 MS.gene57807:CDS
AAGTGCATCTGTGTTGTAGC+TGG 0.421551 6.1:-69384152 None:intergenic
ATTGGTTGATAACTTTGAAT+GGG 0.424222 6.1:+69385247 MS.gene57807:CDS
AAACTTGTCAGATAAAATAA+AGG 0.429402 6.1:+69381699 MS.gene57807:CDS
CTTGATGACTTCACTTAACT+CGG 0.433550 6.1:-69384128 None:intergenic
CAGCGCAATGGAATACCTAT+TGG 0.459924 6.1:+69384383 MS.gene57807:CDS
TTATACGCAGAAATTTCAAA+AGG 0.461398 6.1:+69383168 MS.gene57807:intron
AAAATAAAGGACAGAAGTAA+TGG 0.467864 6.1:+69381712 MS.gene57807:CDS
AACAGGTCGTGAATACCCTT+TGG 0.468123 6.1:-69384577 None:intergenic
TGCCAGGACGAACATCGTCC+AGG 0.472398 6.1:-69382777 None:intergenic
GGGGTTTAGGCTACACTTCG+AGG 0.480196 6.1:+69385267 MS.gene57807:CDS
CACCTGGACGATGTTCGTCC+TGG 0.480398 6.1:+69382775 MS.gene57807:CDS
CAACATAAAATAGTTGCATA+TGG 0.481679 6.1:+69385371 MS.gene57807:CDS
ATTGCAGAAGGAAAGCTTAG+TGG 0.495347 6.1:+69382297 MS.gene57807:intron
TATATGGATCCATTGACAAC+TGG 0.497815 6.1:+69383968 MS.gene57807:CDS
AATCCTTTGTGTATCTTCAA+GGG 0.500154 6.1:-69384874 None:intergenic
TCCATCAACATAAGCATGCT+TGG 0.501327 6.1:-69382745 None:intergenic
CCATCCAAACATGAAATCAA+TGG 0.508555 6.1:-69383272 None:intergenic
ACTAAGGATCTCATGGAGCT+TGG 0.509919 6.1:-69383998 None:intergenic
AATGTGATGGTGCTTTGAAC+CGG 0.510598 6.1:-69381668 None:intergenic
GTTGATGGAAGCTTCGCACC+TGG 0.514214 6.1:+69382759 MS.gene57807:CDS
TGGTTATCAATTTATCCAAA+GGG 0.514428 6.1:+69384562 MS.gene57807:CDS
GGATAGTCGCCAGTTGTCAA+TGG 0.514706 6.1:-69383977 None:intergenic
GCTTTCTCAAGAGGGAATGT+TGG 0.517942 6.1:-69384852 None:intergenic
GGATAACATTAGTGTGTCAC+TGG 0.520216 6.1:+69383200 MS.gene57807:CDS
AGCTCCATGAGATCCTTAGT+AGG 0.526973 6.1:+69384001 MS.gene57807:CDS
ATCAAGCAAAGCTTGTAAAA+GGG 0.528319 6.1:+69384050 MS.gene57807:CDS
CCATTGATTTCATGTTTGGA+TGG 0.528755 6.1:+69383272 MS.gene57807:CDS
TATACGCAGAAATTTCAAAA+GGG 0.528876 6.1:+69383169 MS.gene57807:intron
ATGGTTATCAATTTATCCAA+AGG 0.532166 6.1:+69384561 MS.gene57807:CDS
TGGTAATCGACTCCCTACTA+AGG 0.537611 6.1:-69384014 None:intergenic
ACTCCCTACTAAGGATCTCA+TGG 0.543783 6.1:-69384005 None:intergenic
ATCAATGAGTTGCTGGCCAA+AGG 0.554170 6.1:+69382360 MS.gene57807:CDS
GCATGCTTGGCGAAGGCCCA+TGG 0.558759 6.1:-69382732 None:intergenic
AAGTATTCTGGACCAAGAGA+TGG 0.559511 6.1:-69381935 None:intergenic
GGGATGGTGTCAATGTAAAA+GGG 0.561743 6.1:+69385210 MS.gene57807:intron
CAATAGGTATTCCATTGCGC+TGG 0.561868 6.1:-69384382 None:intergenic
AACATAAGCATGCTTGGCGA+AGG 0.562738 6.1:-69382739 None:intergenic
TGGCAAAACTTGAATTGCAC+CGG 0.571841 6.1:+69382795 MS.gene57807:CDS
TCTTCAAGGGCTTTCTCAAG+AGG 0.573816 6.1:-69384861 None:intergenic
CTTCAAGGGCTTTCTCAAGA+GGG 0.574305 6.1:-69384860 None:intergenic
GTTTAATCCAATAAAATCAA+AGG 0.577644 6.1:-69384074 None:intergenic
AATTTCAAAAGGGCAAGATA+GGG 0.579565 6.1:+69383179 MS.gene57807:CDS
TGGCCAGCAACTCATTGATG+AGG 0.580800 6.1:-69382356 None:intergenic
GCTCCATGAGATCCTTAGTA+GGG 0.587979 6.1:+69384002 MS.gene57807:CDS
GGAAGATGTTGAGATGATCA+AGG 0.589270 6.1:+69381885 MS.gene57807:intron
TTGGTTGATAACTTTGAATG+GGG 0.590135 6.1:+69385248 MS.gene57807:CDS
AGTGCATCTGTGTTGTAGCT+GGG 0.591010 6.1:-69384151 None:intergenic
CATCTTCAAGTGTCTGAGGA+AGG 0.591440 6.1:-69382500 None:intergenic
GATCACACTGAATGAACCAT+GGG 0.595444 6.1:+69382716 MS.gene57807:CDS
TTGATGACTTCACTTAACTC+GGG 0.597810 6.1:-69384127 None:intergenic
TATTCATCTTCAAGTGTCTG+AGG 0.598112 6.1:-69382504 None:intergenic
AGTGGAGGTGTAAATAGGGA+AGG 0.601364 6.1:+69382315 MS.gene57807:CDS
AACATTAGTGTGTCACTGGA+CGG 0.604605 6.1:+69383204 MS.gene57807:CDS
TACTTCATAGATTACAACAA+TGG 0.610172 6.1:+69385299 MS.gene57807:CDS
TTCAGTGGCAGAATCTCCAC+CGG 0.611444 6.1:-69382814 None:intergenic
ACATGCAGGCTGCTTCAGGA+TGG 0.613410 6.1:+69384542 MS.gene57807:intron
TGGAATACCTATTGGCCCAA+CGG 0.614932 6.1:+69384391 MS.gene57807:CDS
GGATCACACTGAATGAACCA+TGG 0.617345 6.1:+69382715 MS.gene57807:CDS
CAAAACTTGAATTGCACCGG+TGG 0.620786 6.1:+69382798 MS.gene57807:CDS
AGTCACTATATAGGGTTCAG+TGG 0.627438 6.1:-69382829 None:intergenic
ATAACGATGGTATTCATCAA+CGG 0.630026 6.1:-69381743 None:intergenic
AGTTTAGCAGTAGAATGTGA+TGG 0.640780 6.1:-69381681 None:intergenic
AGTATTGAACCTTATAACGA+TGG 0.651540 6.1:-69381756 None:intergenic
GCAGAAGGAAAGCTTAGTGG+AGG 0.668340 6.1:+69382300 MS.gene57807:intron
AAGCCCTTGAAGATACACAA+AGG 0.697689 6.1:+69384871 MS.gene57807:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATAATTATTATAAAT+TGG + chr6.1:69382061-69382080 MS.gene57807:intron 0.0%
!! AAATAATAAATATAGTGTAT+TGG - chr6.1:69384662-69384681 None:intergenic 10.0%
!! TTATGATATTTGATTATATT+TGG - chr6.1:69382577-69382596 None:intergenic 10.0%
!! TTGTAAAAAAGTAATTATAA+AGG + chr6.1:69382153-69382172 MS.gene57807:intron 10.0%
!!! ACAATTACATTTTTTTTTTT+AGG + chr6.1:69384305-69384324 MS.gene57807:intron 10.0%
!!! TCATTAATTTAACTTTTTTT+TGG - chr6.1:69384992-69385011 None:intergenic 10.0%
!! AAAAAAAAAATCTTATGGAA+AGG - chr6.1:69382019-69382038 None:intergenic 15.0%
!! CAATTTCTATTTATATACAA+AGG + chr6.1:69383682-69383701 MS.gene57807:intron 15.0%
!! TAATCAAATATCATAAAGTT+AGG + chr6.1:69382581-69382600 MS.gene57807:intron 15.0%
!! TATAAATTAAAGGAAAGTTT+AGG - chr6.1:69383153-69383172 None:intergenic 15.0%
!! TATATTGTGAATCTATAAAT+AGG + chr6.1:69384810-69384829 MS.gene57807:intron 15.0%
!! TATGAACCTTAAATTATATA+TGG + chr6.1:69383308-69383327 MS.gene57807:intron 15.0%
!! TTATCGAAAAAAATTGTTTA+TGG + chr6.1:69383455-69383474 MS.gene57807:intron 15.0%
!!! TAATTTTTGTTATGTTTTGA+GGG - chr6.1:69384951-69384970 None:intergenic 15.0%
!!! TGATATTATATTTTTTTCAC+AGG + chr6.1:69384359-69384378 MS.gene57807:intron 15.0%
!!! TTAATTTTTGTTATGTTTTG+AGG - chr6.1:69384952-69384971 None:intergenic 15.0%
!! AAACCTTATTATATGTTCTA+AGG - chr6.1:69382113-69382132 None:intergenic 20.0%
!! AAACTTGTCAGATAAAATAA+AGG + chr6.1:69381699-69381718 MS.gene57807:CDS 20.0%
!! AAGAATTAAATCAATTCACA+AGG + chr6.1:69382930-69382949 MS.gene57807:intron 20.0%
!! AATTTCTGCGTATAAATTAA+AGG - chr6.1:69383163-69383182 None:intergenic 20.0%
!! ACTAATCACATGTAAAAATA+TGG + chr6.1:69383517-69383536 MS.gene57807:intron 20.0%
!! ATAGGTTAATTAGATAAAGA+AGG - chr6.1:69385147-69385166 None:intergenic 20.0%
!! CTTACTAATATACAATTTGA+TGG + chr6.1:69384779-69384798 MS.gene57807:intron 20.0%
!! GTTTAATCCAATAAAATCAA+AGG - chr6.1:69384077-69384096 None:intergenic 20.0%
!! TATTTAAAAGAATGTATTGC+AGG + chr6.1:69383945-69383964 MS.gene57807:intron 20.0%
!! TCAATTTACCTTAAAAATTG+TGG + chr6.1:69383566-69383585 MS.gene57807:intron 20.0%
!! TGAGTTCCATATATAATTTA+AGG - chr6.1:69383317-69383336 None:intergenic 20.0%
!! TTGATTATATTTGGTCATAA+GGG - chr6.1:69382568-69382587 None:intergenic 20.0%
!! TTTGATTATATTTGGTCATA+AGG - chr6.1:69382569-69382588 None:intergenic 20.0%
!!! ATAGATTTTCGAATTTAGAT+TGG + chr6.1:69382998-69383017 MS.gene57807:intron 20.0%
!!! ATTGTTGACATTTTTTTTAG+AGG + chr6.1:69383403-69383422 MS.gene57807:intron 20.0%
!!! TGAAATAACCACAATTTTTA+AGG - chr6.1:69383577-69383596 None:intergenic 20.0%
! AAAATAAAGGACAGAAGTAA+TGG + chr6.1:69381712-69381731 MS.gene57807:CDS 25.0%
! AATTATAACCACATGTTTGA+AGG + chr6.1:69383861-69383880 MS.gene57807:intron 25.0%
! ACACTTGAAGATGAATATAA+TGG + chr6.1:69382510-69382529 MS.gene57807:CDS 25.0%
! AGACATTATTGATATAATGC+AGG + chr6.1:69381864-69381883 MS.gene57807:intron 25.0%
! ATGGTTATCAATTTATCCAA+AGG + chr6.1:69384561-69384580 MS.gene57807:CDS 25.0%
! CAACATAAAATAGTTGCATA+TGG + chr6.1:69385371-69385390 MS.gene57807:CDS 25.0%
! CTAGACATTAAACTCTTAAA+GGG + chr6.1:69383352-69383371 MS.gene57807:intron 25.0%
! GGTTAACTTAGTTAATTAGA+TGG + chr6.1:69383538-69383557 MS.gene57807:intron 25.0%
! GTAAATAGATTAGTGAATAG+TGG - chr6.1:69383796-69383815 None:intergenic 25.0%
! TACATATGGTAATAGTTAGA+GGG - chr6.1:69382632-69382651 None:intergenic 25.0%
! TACTTCATAGATTACAACAA+TGG + chr6.1:69385299-69385318 MS.gene57807:CDS 25.0%
! TAGACATTAAACTCTTAAAG+GGG + chr6.1:69383353-69383372 MS.gene57807:intron 25.0%
! TATACGCAGAAATTTCAAAA+GGG + chr6.1:69383169-69383188 MS.gene57807:intron 25.0%
! TCAATTGTATCTATCAATGT+AGG + chr6.1:69382444-69382463 MS.gene57807:intron 25.0%
! TGATTATGAGTCACTATATA+GGG - chr6.1:69382840-69382859 None:intergenic 25.0%
! TGGTTATCAATTTATCCAAA+GGG + chr6.1:69384562-69384581 MS.gene57807:CDS 25.0%
! TGTCCTTAGAACATATAATA+AGG + chr6.1:69382107-69382126 MS.gene57807:intron 25.0%
! TGTGAATCTATAAATAGGTA+TGG + chr6.1:69384815-69384834 MS.gene57807:intron 25.0%
! TTATACGCAGAAATTTCAAA+AGG + chr6.1:69383168-69383187 MS.gene57807:intron 25.0%
! TTGATCTATATCACTGAAAA+TGG + chr6.1:69384631-69384650 MS.gene57807:CDS 25.0%
! TTGATTATGAGTCACTATAT+AGG - chr6.1:69382841-69382860 None:intergenic 25.0%
! TTTCTTCTCTAATACATCAA+AGG + chr6.1:69384279-69384298 MS.gene57807:intron 25.0%
!! TAAGAGACATTTTCTTCTTT+TGG + chr6.1:69381977-69381996 MS.gene57807:intron 25.0%
!! TTTTCAGTGATATAGATCAA+TGG - chr6.1:69384631-69384650 None:intergenic 25.0%
!!! ACATTTTTGGATATCTTTTG+AGG - chr6.1:69385325-69385344 None:intergenic 25.0%
!!! ATGTATCCAATTTTTTTACC+AGG + chr6.1:69385189-69385208 MS.gene57807:intron 25.0%
!!! ATTGGTTGATAACTTTGAAT+GGG + chr6.1:69385247-69385266 MS.gene57807:CDS 25.0%
!!! TGTATCCAATTTTTTTACCA+GGG + chr6.1:69385190-69385209 MS.gene57807:intron 25.0%
!!! TTATTTTAGTGTAGATCAAC+AGG - chr6.1:69384597-69384616 None:intergenic 25.0%
!!! TTTTGTTACCCTTTTTCATT+GGG + chr6.1:69382476-69382495 MS.gene57807:CDS 25.0%
AAATTTCAAAAGGGCAAGAT+AGG + chr6.1:69383178-69383197 MS.gene57807:CDS 30.0%
AAGAATGTATTGCAGGTATA+TGG + chr6.1:69383952-69383971 MS.gene57807:intron 30.0%
AATACTTTCCTAATTGCAGA+AGG + chr6.1:69382285-69382304 MS.gene57807:intron 30.0%
AATCCTTTGTGTATCTTCAA+GGG - chr6.1:69384877-69384896 None:intergenic 30.0%
AATTTCAAAAGGGCAAGATA+GGG + chr6.1:69383179-69383198 MS.gene57807:CDS 30.0%
ATAACGATGGTATTCATCAA+CGG - chr6.1:69381746-69381765 None:intergenic 30.0%
ATACTTCCAAGTAAGAAACT+AGG + chr6.1:69381952-69381971 MS.gene57807:intron 30.0%
ATCAAGCAAAGCTTGTAAAA+GGG + chr6.1:69384050-69384069 MS.gene57807:CDS 30.0%
ATTCACTCTTCTACTTTCAA+AGG + chr6.1:69384488-69384507 MS.gene57807:intron 30.0%
CAATGAAAAAGGGTAACAAA+AGG - chr6.1:69382477-69382496 None:intergenic 30.0%
CCTAGACATTAAACTCTTAA+AGG + chr6.1:69383351-69383370 MS.gene57807:intron 30.0%
CTACATATGGTAATAGTTAG+AGG - chr6.1:69382633-69382652 None:intergenic 30.0%
CTCTAACTATTACCATATGT+AGG + chr6.1:69382631-69382650 MS.gene57807:intron 30.0%
GATATGGGTGTTTAAAAAAG+TGG - chr6.1:69383485-69383504 None:intergenic 30.0%
GATGTGAGTTACACTATATT+TGG - chr6.1:69382546-69382565 None:intergenic 30.0%
TACTTCCAAGTAAGAAACTA+GGG + chr6.1:69381953-69381972 MS.gene57807:intron 30.0%
TATCAAGCAAAGCTTGTAAA+AGG + chr6.1:69384049-69384068 MS.gene57807:CDS 30.0%
TCGAAAATCATTCCTACATA+TGG - chr6.1:69382646-69382665 None:intergenic 30.0%
TGATGAATACCATCGTTATA+AGG + chr6.1:69381747-69381766 MS.gene57807:CDS 30.0%
TGTCTACAAAACTAAGTATC+AGG + chr6.1:69382887-69382906 MS.gene57807:CDS 30.0%
TTCACTCTTCTACTTTCAAA+GGG + chr6.1:69384489-69384508 MS.gene57807:intron 30.0%
TTGGCAATAGAGTAAAGAAT+TGG + chr6.1:69382694-69382713 MS.gene57807:CDS 30.0%
! ACACACAAATTAAAGCATCA+TGG - chr6.1:69381796-69381815 None:intergenic 30.0%
! AGTATTGAACCTTATAACGA+TGG - chr6.1:69381759-69381778 None:intergenic 30.0%
! AGTTCATATTTGATGACCTT+TGG - chr6.1:69382379-69382398 None:intergenic 30.0%
! CCTTTAAGAGTTTAATGTCT+AGG - chr6.1:69383354-69383373 None:intergenic 30.0%
! CTTATAGATTTTCCATCTCT+TGG + chr6.1:69381923-69381942 MS.gene57807:CDS 30.0%
! TCCAATTTTGTATCATAGAG+TGG - chr6.1:69383232-69383251 None:intergenic 30.0%
!! AAAGGGTCCTTTGATTTTAT+TGG + chr6.1:69384067-69384086 MS.gene57807:CDS 30.0%
!! CATTGGTTGATAACTTTGAA+TGG + chr6.1:69385246-69385265 MS.gene57807:CDS 30.0%
!! CTTTTGTTACCCTTTTTCAT+TGG + chr6.1:69382475-69382494 MS.gene57807:CDS 30.0%
!! GAGCTTTGCTTTAAAGAATT+TGG + chr6.1:69382675-69382694 MS.gene57807:CDS 30.0%
!! GCTTGATATTTTGAGAACTT+TGG - chr6.1:69384037-69384056 None:intergenic 30.0%
!! TAGTGAATAGTGGATTACTT+AGG - chr6.1:69383786-69383805 None:intergenic 30.0%
!! TTGGTTGATAACTTTGAATG+GGG + chr6.1:69385248-69385267 MS.gene57807:CDS 30.0%
!! TTTCTTACTTGGAAGTATTC+TGG - chr6.1:69381950-69381969 None:intergenic 30.0%
!!! ATGTAAAAGGGTATTTTGCA+TGG + chr6.1:69385222-69385241 MS.gene57807:CDS 30.0%
!!! CTTAGTTTTGTAGACATTGA+CGG - chr6.1:69382883-69382902 None:intergenic 30.0%
ACCATCCCTGGTAAAAAAAT+TGG - chr6.1:69385198-69385217 None:intergenic 35.0%
AGTGATCAATCTGGTGATAT+GGG - chr6.1:69383500-69383519 None:intergenic 35.0%
AGTTTAGCAGTAGAATGTGA+TGG - chr6.1:69381684-69381703 None:intergenic 35.0%
ATATTTCAACATGTGCCCTA+AGG + chr6.1:69382225-69382244 MS.gene57807:intron 35.0%
ATCCAAAAATGTCAGCTATC+TGG + chr6.1:69385333-69385352 MS.gene57807:CDS 35.0%
CAATCCTTTGTGTATCTTCA+AGG - chr6.1:69384878-69384897 None:intergenic 35.0%
CATATATACACACACGCAAT+AGG - chr6.1:69385165-69385184 None:intergenic 35.0%
CATGTGATTAGTGATCAATC+TGG - chr6.1:69383509-69383528 None:intergenic 35.0%
CCATCCAAACATGAAATCAA+TGG - chr6.1:69383275-69383294 None:intergenic 35.0%
CTACACTATATTACACATGC+AGG + chr6.1:69384528-69384547 MS.gene57807:intron 35.0%
GATAACTTTGAATGGGGTTT+AGG + chr6.1:69385254-69385273 MS.gene57807:CDS 35.0%
GATGATCAAGGACATCAATA+TGG + chr6.1:69381897-69381916 MS.gene57807:CDS 35.0%
GCCACTCTATGATACAAAAT+TGG + chr6.1:69383228-69383247 MS.gene57807:CDS 35.0%
TAAGCTTTCCTTCTGCAATT+AGG - chr6.1:69382296-69382315 None:intergenic 35.0%
TAGTGATCAATCTGGTGATA+TGG - chr6.1:69383501-69383520 None:intergenic 35.0%
TATATGGATCCATTGACAAC+TGG + chr6.1:69383968-69383987 MS.gene57807:CDS 35.0%
TATTCATCTTCAAGTGTCTG+AGG - chr6.1:69382507-69382526 None:intergenic 35.0%
! AAATGCTAACTTGTGCCTTA+GGG - chr6.1:69382243-69382262 None:intergenic 35.0%
! AACCAGATAGCTGACATTTT+TGG - chr6.1:69385338-69385357 None:intergenic 35.0%
! CAATGAGCTACACCATTTTA+TGG - chr6.1:69383387-69383406 None:intergenic 35.0%
! CTTGATGACTTCACTTAACT+CGG - chr6.1:69384131-69384150 None:intergenic 35.0%
! TTGATGACTTCACTTAACTC+GGG - chr6.1:69384130-69384149 None:intergenic 35.0%
!! ACTCACTTTTGAATACTCTC+TGG + chr6.1:69383067-69383086 MS.gene57807:intron 35.0%
!! AGAGCCATTGATTTCATGTT+TGG + chr6.1:69383268-69383287 MS.gene57807:CDS 35.0%
!! CCATTGATTTCATGTTTGGA+TGG + chr6.1:69383272-69383291 MS.gene57807:CDS 35.0%
!!! TCCAATTTTTTTACCAGGGA+TGG + chr6.1:69385194-69385213 MS.gene57807:intron 35.0%
AAGCCCTTGAAGATACACAA+AGG + chr6.1:69384871-69384890 MS.gene57807:CDS 40.0%
AAGGTGCATCTCTTAGACTT+GGG + chr6.1:69382949-69382968 MS.gene57807:intron 40.0%
AAGTATTCTGGACCAAGAGA+TGG - chr6.1:69381938-69381957 None:intergenic 40.0%
AGGAAGGTCCCAATGAAAAA+GGG - chr6.1:69382487-69382506 None:intergenic 40.0%
AGTCACTATATAGGGTTCAG+TGG - chr6.1:69382832-69382851 None:intergenic 40.0%
ATTCTCATGCACATACCGTT+GGG - chr6.1:69384409-69384428 None:intergenic 40.0%
ATTGCAGAAGGAAAGCTTAG+TGG + chr6.1:69382297-69382316 MS.gene57807:intron 40.0%
CTCTCGCTACATAAACTTGT+TGG - chr6.1:69383036-69383055 None:intergenic 40.0%
CTTAGCCCTAGTTTCTTACT+TGG - chr6.1:69381961-69381980 None:intergenic 40.0%
GATCACACTGAATGAACCAT+GGG + chr6.1:69382716-69382735 MS.gene57807:CDS 40.0%
GGAAGATGTTGAGATGATCA+AGG + chr6.1:69381885-69381904 MS.gene57807:intron 40.0%
GGATAACATTAGTGTGTCAC+TGG + chr6.1:69383200-69383219 MS.gene57807:CDS 40.0%
GGGTGCATTAGTTGCATAAT+GGG - chr6.1:69384110-69384129 None:intergenic 40.0%
TATTCTCATGCACATACCGT+TGG - chr6.1:69384410-69384429 None:intergenic 40.0%
TCACAACACCTTCAAACATG+TGG - chr6.1:69383872-69383891 None:intergenic 40.0%
TCCATCAACATAAGCATGCT+TGG - chr6.1:69382748-69382767 None:intergenic 40.0%
TGGCAAAACTTGAATTGCAC+CGG + chr6.1:69382795-69382814 MS.gene57807:CDS 40.0%
! AACATTAGTGTGTCACTGGA+CGG + chr6.1:69383204-69383223 MS.gene57807:CDS 40.0%
! AATGTGATGGTGCTTTGAAC+CGG - chr6.1:69381671-69381690 None:intergenic 40.0%
! AGCTTAGTGGAGGTGTAAAT+AGG + chr6.1:69382310-69382329 MS.gene57807:CDS 40.0%
! AGGGATGGTGTCAATGTAAA+AGG + chr6.1:69385209-69385228 MS.gene57807:intron 40.0%
! GAAATGCTAACTTGTGCCTT+AGG - chr6.1:69382244-69382263 None:intergenic 40.0%
! GCTTAGTGGAGGTGTAAATA+GGG + chr6.1:69382311-69382330 MS.gene57807:CDS 40.0%
! GGGATGGTGTCAATGTAAAA+GGG + chr6.1:69385210-69385229 MS.gene57807:intron 40.0%
! TTTTACATTGACACCATCCC+TGG - chr6.1:69385210-69385229 None:intergenic 40.0%
!! AGGGTATTTTGCATGGTCAT+TGG + chr6.1:69385229-69385248 MS.gene57807:CDS 40.0%
AACAGGTCGTGAATACCCTT+TGG - chr6.1:69384580-69384599 None:intergenic 45.0%
AACATAAGCATGCTTGGCGA+AGG - chr6.1:69382742-69382761 None:intergenic 45.0%
AAGTGCATCTGTGTTGTAGC+TGG - chr6.1:69384155-69384174 None:intergenic 45.0%
ACTAAGGATCTCATGGAGCT+TGG - chr6.1:69384001-69384020 None:intergenic 45.0%
ACTCCCTACTAAGGATCTCA+TGG - chr6.1:69384008-69384027 None:intergenic 45.0%
AGCTCCATGAGATCCTTAGT+AGG + chr6.1:69384001-69384020 MS.gene57807:CDS 45.0%
AGTGCATCTGTGTTGTAGCT+GGG - chr6.1:69384154-69384173 None:intergenic 45.0%
ATCAATGAGTTGCTGGCCAA+AGG + chr6.1:69382360-69382379 MS.gene57807:CDS 45.0%
CAAAACTTGAATTGCACCGG+TGG + chr6.1:69382798-69382817 MS.gene57807:CDS 45.0%
CAACCTCATCAATGAGTTGC+TGG + chr6.1:69382353-69382372 MS.gene57807:CDS 45.0%
CAAGGTGCATCTCTTAGACT+TGG + chr6.1:69382948-69382967 MS.gene57807:intron 45.0%
CAATAGGTATTCCATTGCGC+TGG - chr6.1:69384385-69384404 None:intergenic 45.0%
CAGCGCAATGGAATACCTAT+TGG + chr6.1:69384383-69384402 MS.gene57807:CDS 45.0%
CATCTTCAAGTGTCTGAGGA+AGG - chr6.1:69382503-69382522 None:intergenic 45.0%
CGGGTGCATTAGTTGCATAA+TGG - chr6.1:69384111-69384130 None:intergenic 45.0%
CTTCAAGGGCTTTCTCAAGA+GGG - chr6.1:69384863-69384882 None:intergenic 45.0%
GAGGAAGGTCCCAATGAAAA+AGG - chr6.1:69382488-69382507 None:intergenic 45.0%
GCCAAGCATGCTTATGTTGA+TGG + chr6.1:69382744-69382763 MS.gene57807:CDS 45.0%
GCTCCATGAGATCCTTAGTA+GGG + chr6.1:69384002-69384021 MS.gene57807:CDS 45.0%
GCTTTCTCAAGAGGGAATGT+TGG - chr6.1:69384855-69384874 None:intergenic 45.0%
GGATCACACTGAATGAACCA+TGG + chr6.1:69382715-69382734 MS.gene57807:CDS 45.0%
TCTTCAAGGGCTTTCTCAAG+AGG - chr6.1:69384864-69384883 None:intergenic 45.0%
TGGAATACCTATTGGCCCAA+CGG + chr6.1:69384391-69384410 MS.gene57807:CDS 45.0%
TTAGGCTACACTTCGAGGTT+TGG + chr6.1:69385272-69385291 MS.gene57807:CDS 45.0%
! AGTGGAGGTGTAAATAGGGA+AGG + chr6.1:69382315-69382334 MS.gene57807:CDS 45.0%
! TGGTAATCGACTCCCTACTA+AGG - chr6.1:69384017-69384036 None:intergenic 45.0%
!! GGTGCAATTCAAGTTTTGCC+AGG - chr6.1:69382796-69382815 None:intergenic 45.0%
!! ATTAAAAAAAAAAAATCTTA+TGG - chr6.1:69382024-69382043 None:intergenic 5.0%
GCAGAAGGAAAGCTTAGTGG+AGG + chr6.1:69382300-69382319 MS.gene57807:intron 50.0%
GGATAGTCGCCAGTTGTCAA+TGG - chr6.1:69383980-69383999 None:intergenic 50.0%
GGGGAACGCTGACCATAAAA+TGG + chr6.1:69383372-69383391 MS.gene57807:intron 50.0%
TGGCCAGCAACTCATTGATG+AGG - chr6.1:69382359-69382378 None:intergenic 50.0%
TTACACATGCAGGCTGCTTC+AGG + chr6.1:69384538-69384557 MS.gene57807:intron 50.0%
TTCAGTGGCAGAATCTCCAC+CGG - chr6.1:69382817-69382836 None:intergenic 50.0%
! TTTTTCACAGGCCAGCGCAA+TGG + chr6.1:69384371-69384390 MS.gene57807:intron 50.0%
ACATGCAGGCTGCTTCAGGA+TGG + chr6.1:69384542-69384561 MS.gene57807:intron 55.0%
GCACATACCGTTGGGCCAAT+AGG - chr6.1:69384401-69384420 None:intergenic 55.0%
GGGGTTTAGGCTACACTTCG+AGG + chr6.1:69385267-69385286 MS.gene57807:CDS 55.0%
! GTTGATGGAAGCTTCGCACC+TGG + chr6.1:69382759-69382778 MS.gene57807:CDS 55.0%
CACCTGGACGATGTTCGTCC+TGG + chr6.1:69382775-69382794 MS.gene57807:CDS 60.0%
TGCCAGGACGAACATCGTCC+AGG - chr6.1:69382780-69382799 None:intergenic 60.0%
GCATGCTTGGCGAAGGCCCA+TGG - chr6.1:69382735-69382754 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 69381664 69385406 69381664 ID=MS.gene57807
chr6.1 mRNA 69381664 69385406 69381664 ID=MS.gene57807.t1;Parent=MS.gene57807
chr6.1 exon 69381664 69381768 69381664 ID=MS.gene57807.t1.exon1;Parent=MS.gene57807.t1
chr6.1 CDS 69381664 69381768 69381664 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69381886 69381961 69381886 ID=MS.gene57807.t1.exon2;Parent=MS.gene57807.t1
chr6.1 CDS 69381886 69381961 69381886 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69382304 69382381 69382304 ID=MS.gene57807.t1.exon3;Parent=MS.gene57807.t1
chr6.1 CDS 69382304 69382381 69382304 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69382466 69382553 69382466 ID=MS.gene57807.t1.exon4;Parent=MS.gene57807.t1
chr6.1 CDS 69382466 69382553 69382466 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69382653 69382908 69382653 ID=MS.gene57807.t1.exon5;Parent=MS.gene57807.t1
chr6.1 CDS 69382653 69382908 69382653 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69383178 69383293 69383178 ID=MS.gene57807.t1.exon6;Parent=MS.gene57807.t1
chr6.1 CDS 69383178 69383293 69383178 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69383967 69384187 69383967 ID=MS.gene57807.t1.exon7;Parent=MS.gene57807.t1
chr6.1 CDS 69383967 69384187 69383967 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69384381 69384412 69384381 ID=MS.gene57807.t1.exon8;Parent=MS.gene57807.t1
chr6.1 CDS 69384381 69384412 69384381 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69384550 69384652 69384550 ID=MS.gene57807.t1.exon9;Parent=MS.gene57807.t1
chr6.1 CDS 69384550 69384652 69384550 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69384832 69384940 69384832 ID=MS.gene57807.t1.exon10;Parent=MS.gene57807.t1
chr6.1 CDS 69384832 69384940 69384832 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
chr6.1 exon 69385211 69385406 69385211 ID=MS.gene57807.t1.exon11;Parent=MS.gene57807.t1
chr6.1 CDS 69385211 69385406 69385211 ID=cds.MS.gene57807.t1;Parent=MS.gene57807.t1
Gene Sequence

>MS.gene57807

ATGTCCGGTTCAAAGCACCATCACATTCTACTGCTAAACTTGTCAGATAAAATAAAGGACAGAAGTAATGGAGACATAGCCGTTGATGAATACCATCGTTATAAGGTTCAATACTATGCTCTAACATGTCCATGATGCTTTAATTTGTGTGTTAATAATATTAATATAATAATAAAAACATTGATGCTAGAGCATAATTAAGACATTATTGATATAATGCAGGAAGATGTTGAGATGATCAAGGACATCAATATGGATGCTTATAGATTTTCCATCTCTTGGTCCAGAATACTTCCAAGTAAGAAACTAGGGCTAAGAGACATTTTCTTCTTTTGGAAACTTTTGAACATTACCTTTCCATAAGATTTTTTTTTTTTAATGTTTATAATTGATAATAAATTTATAATTATTATAAATTGGCAAATTCTTATCATGCTAACATGTGTCCTTAGAACATATAATAAGGTTTTTACAAGTAGTAAATATTTATTGTAAAAAAGTAATTATAAAGGACTTGAAAAATAAATTTGCACAATTTTCAATACAGAATTTTCATTAAAAATATTTCAACATGTGCCCTAAGGCACAAGTTAGCATTTCTCAATACTTATTTACATGTTGAATACTTTCCTAATTGCAGAAGGAAAGCTTAGTGGAGGTGTAAATAGGGAAGGAATTAAGTATTACAACAACCTCATCAATGAGTTGCTGGCCAAAGGTCATCAAATATGAACTTAATGTTTGTCTTTTTTGTTTTCAATTATTTTTGTCTAAAATATTTCAATTGTATCTATCAATGTAGGTCTTCAACCTTTTGTTACCCTTTTTCATTGGGACCTTCCTCAGACACTTGAAGATGAATATAATGGCTTTTTAAGTCCAAATATAGTGTAACTCACATCCCTTATGACCAAATATAATCAAATATCATAAAGTTAGGCATATCATCATTCATCATGTGTTTTCCCTCTAACTATTACCATATGTAGGAATGATTTTCGAGACTATGCAGAGCTTTGCTTTAAAGAATTTGGCAATAGAGTAAAGAATTGGATCACACTGAATGAACCATGGGCCTTCGCCAAGCATGCTTATGTTGATGGAAGCTTCGCACCTGGACGATGTTCGTCCTGGCAAAACTTGAATTGCACCGGTGGAGATTCTGCCACTGAACCCTATATAGTGACTCATAATCAAATACTTGCTCATGCATCTGCCGTCAATGTCTACAAAACTAAGTATCAGGTATTATTTTATTTTAACTAAAAGAATTAAATCAATTCACAAGGTGCATCTCTTAGACTTGGGTTATGCGCTATATATGATAGTGTATGATAGATTTTCGAATTTAGATTGGACTGAAATCAATCCAACAAGTTTATGTAGCGAGAGTTGTTAGCAACACTCACTTTTGAATACTCTCTGGCACTCACTCATATTCTAACACTAAGTGTTTCTTTAAACATTTAATTTACTCACATTGAGACCTAAACTTTCCTTTAATTTATACGCAGAAATTTCAAAAGGGCAAGATAGGGATAACATTAGTGTGTCACTGGACGGTGCCACTCTATGATACAAAATTGGATCATCATGCTTCACAAAGAGCCATTGATTTCATGTTTGGATGGTAATTAACTACTTTATGAACCTTAAATTATATATGGAACTCAACTACATTAATTATCCTAGACATTAAACTCTTAAAGGGGAACGCTGACCATAAAATGGTGTAGCTCATTGTTGACATTTTTTTTAGAGGCGCATTGTTGACATTTTTATTTATTATATTTATCGAAAAAAATTGTTTATGGACATCCACTTTTTTAAACACCCATATCACCAGATTGATCACTAATCACATGTAAAAATATGGTTAACTTAGTTAATTAGATGGTTAGTTCAATTTACCTTAAAAATTGTGGTTATTTCATGTAGTTGAATTAATAACAATTTGACTATAAATTAATATCATGATTGAATGAAATAGTAAGTTTATTGATTGAATATTGAATGTACAATTTCTATTTATATACAAAGGAGACTCTACACGCTAGCTTATTGTGCAAGTAATCACACATGATTACTAAACTAAACTAGCTAACTAGATAACTTGTTGCCTAAGTAATCCACTATTCACTAATCTATTTACTAGTATCTTCATTTGCAATAATTAAGTTAATCATCTATTCAATTGAATTATAACCACATGTTTGAAGGTGTTGTGAGAATGTGCAAAAAGAAAGTGTTGTCTATGTATCATTACTATTATCAAAATATATATTTAAAAGAATGTATTGCAGGTATATGGATCCATTGACAACTGGCGACTATCCAAGCTCCATGAGATCCTTAGTAGGGAGTCGATTACCAAAGTTCTCAAAATATCAAGCAAAGCTTGTAAAAGGGTCCTTTGATTTTATTGGATTAAACTATTACACTTCCCATTATGCAACTAATGCACCCGAGTTAAGTGAAGTCATCAAGCCCAGCTACAACACAGATGCACTTGTTAGTTTTACAAGTAAGTGTGTTTAATGATGAATGAAATTTTTAGTAATATAACACACTTTACTCACTATCACATCTTAAACGTGTGACAAAATGAAAAAAAATTTCTTCTCTAATACATCAAAGGTATACAATTACATTTTTTTTTTTAGGAATTATATATATTTTTGTTAGCAATAGATTATGATATTATATTTTTTTCACAGGCCAGCGCAATGGAATACCTATTGGCCCAACGGTATGTGCATGAGAATATAATTGATATGAGAAATGCTAAGAACATTCTCTTTCTAGCACTCTCTTTAACACTAACATTCACTCTTCTACTTTCAAAGGGTATTTACATTGTAGCTCTACACTATATTACACATGCAGGCTGCTTCAGGATGGTTATCAATTTATCCAAAGGGTATTCACGACCTGTTGATCTACACTAAAATAAAGTACAACAATCCATTGATCTATATCACTGAAAATGGTAATACCAATACACTATATTTATTATTTATTTTAAATCTATTTCTTTAAGCTATTTCTTTAAGCAAAAATTAAGATTTGATTATGCTAAAATTTGAATAGAGAATATGTGCTGATGTATTTATTTCTTACTAATATACAATTTGATGGTAAACAACTATATTGTGAATCTATAAATAGGTATGGATGACTTTAATGATCCAACATTCCCTCTTGAGAAAGCCCTTGAAGATACACAAAGGATTGATTACTATTATGATCATCTCTACTATCTTCAAACTGCAATAAAGTATGTGCCCTCAAAACATAACAAAAATTAAATTAATGATTTTTTTGACCAAAAAAAAGTTAAATTAATGATAGAAATGTATAGAACAATAATATAAATTTTGTCTCTAATTCTCTATGTATTTATGACTAAACTCGTGACACATTTTATTTTTTTCTATATAGAAATTTAAATGCTAATTTTATTTTTGTATAGTGCAAATTCCTTCTTTATCTAATTAACCTATTGCGTGTGTGTATATATGTTTAATGTATCCAATTTTTTTACCAGGGATGGTGTCAATGTAAAAGGGTATTTTGCATGGTCATTGGTTGATAACTTTGAATGGGGTTTAGGCTACACTTCGAGGTTTGGAATATACTTCATAGATTACAACAATGGCCTCAAAAGATATCCAAAAATGTCAGCTATCTGGTTTAAGAATTTTCTACAACATAAAATAGTTGCATATGGTGATTCGCGCTAA

Protein sequence

>MS.gene57807.t1

MSGSKHHHILLLNLSDKIKDRSNGDIAVDEYHRYKEDVEMIKDINMDAYRFSISWSRILPKGKLSGGVNREGIKYYNNLINELLAKGLQPFVTLFHWDLPQTLEDEYNGFLSPNIVNDFRDYAELCFKEFGNRVKNWITLNEPWAFAKHAYVDGSFAPGRCSSWQNLNCTGGDSATEPYIVTHNQILAHASAVNVYKTKYQKFQKGKIGITLVCHWTVPLYDTKLDHHASQRAIDFMFGWYMDPLTTGDYPSSMRSLVGSRLPKFSKYQAKLVKGSFDFIGLNYYTSHYATNAPELSEVIKPSYNTDALVSFTSQRNGIPIGPTAASGWLSIYPKGIHDLLIYTKIKYNNPLIYITENGMDDFNDPTFPLEKALEDTQRIDYYYDHLYYLQTAIKDGVNVKGYFAWSLVDNFEWGLGYTSRFGIYFIDYNNGLKRYPKMSAIWFKNFLQHKIVAYGDSR