Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58617.t1 | XP_013463300.1 | 99.8 | 420 | 1 | 0 | 1 | 420 | 1 | 420 | 3.10E-241 | 844 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58617.t1 | Q94AH6 | 79.9 | 418 | 81 | 1 | 3 | 420 | 2 | 416 | 2.0e-196 | 686.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58617.t1 | A0A072V6S2 | 99.8 | 420 | 1 | 0 | 1 | 420 | 1 | 420 | 2.2e-241 | 844.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene58617 | 0.822289 | 2.56E-53 | -1.69E-46 |
| MS.gene049264 | MS.gene58617 | 0.810142 | 1.34E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene58617 | 0.820616 | 6.24E-53 | -1.69E-46 |
| MS.gene049801 | MS.gene58617 | 0.826595 | 2.49E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene58617 | 0.819809 | 9.56E-53 | -1.69E-46 |
| MS.gene050084 | MS.gene58617 | 0.852026 | 6.04E-61 | -1.69E-46 |
| MS.gene050085 | MS.gene58617 | 0.855942 | 4.50E-62 | -1.69E-46 |
| MS.gene050116 | MS.gene58617 | 0.810762 | 9.81E-51 | -1.69E-46 |
| MS.gene050213 | MS.gene58617 | 0.82501 | 5.92E-54 | -1.69E-46 |
| MS.gene050359 | MS.gene58617 | 0.830781 | 2.42E-55 | -1.69E-46 |
| MS.gene050361 | MS.gene58617 | 0.84395 | 1.02E-58 | -1.69E-46 |
| MS.gene050551 | MS.gene58617 | 0.818977 | 1.48E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene58617 | 0.825538 | 4.44E-54 | -1.69E-46 |
| MS.gene050646 | MS.gene58617 | 0.829781 | 4.25E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene58617 | 0.860807 | 1.60E-63 | -1.69E-46 |
| MS.gene051066 | MS.gene58617 | 0.80428 | 2.33E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene58617 | 0.816517 | 5.31E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene58617 | 0.803566 | 3.28E-49 | -1.69E-46 |
| MS.gene051209 | MS.gene58617 | 0.853918 | 1.74E-61 | -1.69E-46 |
| MS.gene051343 | MS.gene58617 | 0.800435 | 1.44E-48 | -1.69E-46 |
| MS.gene051800 | MS.gene58617 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene58617 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene052242 | MS.gene58617 | -0.839787 | 1.29E-57 | -1.69E-46 |
| MS.gene052307 | MS.gene58617 | 0.841092 | 5.86E-58 | -1.69E-46 |
| MS.gene052609 | MS.gene58617 | 0.869498 | 2.96E-66 | -1.69E-46 |
| MS.gene052674 | MS.gene58617 | 0.813522 | 2.45E-51 | -1.69E-46 |
| MS.gene052675 | MS.gene58617 | 0.815511 | 8.91E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene58617 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene052775 | MS.gene58617 | 0.844109 | 9.26E-59 | -1.69E-46 |
| MS.gene052776 | MS.gene58617 | 0.895065 | 1.37E-75 | -1.69E-46 |
| MS.gene052932 | MS.gene58617 | 0.810953 | 8.92E-51 | -1.69E-46 |
| MS.gene052994 | MS.gene58617 | 0.850892 | 1.27E-60 | -1.69E-46 |
| MS.gene053058 | MS.gene58617 | 0.80978 | 1.60E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene58617 | 0.806076 | 9.80E-50 | -1.69E-46 |
| MS.gene05315 | MS.gene58617 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene053486 | MS.gene58617 | 0.871545 | 6.30E-67 | -1.69E-46 |
| MS.gene053620 | MS.gene58617 | 0.811342 | 7.34E-51 | -1.69E-46 |
| MS.gene053726 | MS.gene58617 | 0.830643 | 2.62E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene58617 | 0.841788 | 3.84E-58 | -1.69E-46 |
| MS.gene054576 | MS.gene58617 | 0.809345 | 1.98E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene58617 | 0.814263 | 1.68E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene58617 | 0.81792 | 2.57E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene58617 | 0.823969 | 1.04E-53 | -1.69E-46 |
| MS.gene055313 | MS.gene58617 | 0.829251 | 5.72E-55 | -1.69E-46 |
| MS.gene055314 | MS.gene58617 | 0.810814 | 9.56E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene58617 | 0.813859 | 2.07E-51 | -1.69E-46 |
| MS.gene055582 | MS.gene58617 | 0.817871 | 2.63E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene58617 | 0.846161 | 2.58E-59 | -1.69E-46 |
| MS.gene056045 | MS.gene58617 | 0.868146 | 8.11E-66 | -1.69E-46 |
| MS.gene056097 | MS.gene58617 | 0.827305 | 1.68E-54 | -1.69E-46 |
| MS.gene05615 | MS.gene58617 | 0.823568 | 1.29E-53 | -1.69E-46 |
| MS.gene056181 | MS.gene58617 | 0.843448 | 1.39E-58 | -1.69E-46 |
| MS.gene056480 | MS.gene58617 | 0.814554 | 1.45E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene58617 | 0.833407 | 5.43E-56 | -1.69E-46 |
| MS.gene056519 | MS.gene58617 | 0.819145 | 1.35E-52 | -1.69E-46 |
| MS.gene056622 | MS.gene58617 | 0.800248 | 1.58E-48 | -1.69E-46 |
| MS.gene056699 | MS.gene58617 | 0.803546 | 3.31E-49 | -1.69E-46 |
| MS.gene056973 | MS.gene58617 | 0.829589 | 4.73E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene58617 | 0.816604 | 5.08E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene58617 | 0.811816 | 5.79E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene58617 | 0.818276 | 2.13E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene58617 | 0.839113 | 1.92E-57 | -1.69E-46 |
| MS.gene058223 | MS.gene58617 | -0.810704 | 1.01E-50 | -1.69E-46 |
| MS.gene058289 | MS.gene58617 | 0.865629 | 5.14E-65 | -1.69E-46 |
| MS.gene058292 | MS.gene58617 | 0.860445 | 2.06E-63 | -1.69E-46 |
| MS.gene058429 | MS.gene58617 | 0.822239 | 2.63E-53 | -1.69E-46 |
| MS.gene058638 | MS.gene58617 | 0.847866 | 8.82E-60 | -1.69E-46 |
| MS.gene058639 | MS.gene58617 | 0.84533 | 4.34E-59 | -1.69E-46 |
| MS.gene058647 | MS.gene58617 | 0.837409 | 5.29E-57 | -1.69E-46 |
| MS.gene058758 | MS.gene58617 | 0.826765 | 2.27E-54 | -1.69E-46 |
| MS.gene058919 | MS.gene58617 | 0.823476 | 1.36E-53 | -1.69E-46 |
| MS.gene059007 | MS.gene58617 | 0.865775 | 4.62E-65 | -1.69E-46 |
| MS.gene059170 | MS.gene58617 | 0.809585 | 1.76E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene58617 | 0.84456 | 7.01E-59 | -1.69E-46 |
| MS.gene059965 | MS.gene58617 | 0.80658 | 7.68E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene58617 | 0.812378 | 4.37E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene58617 | 0.83681 | 7.52E-57 | -1.69E-46 |
| MS.gene060380 | MS.gene58617 | 0.858793 | 6.45E-63 | -1.69E-46 |
| MS.gene060400 | MS.gene58617 | 0.8274 | 1.60E-54 | -1.69E-46 |
| MS.gene060520 | MS.gene58617 | 0.825227 | 5.26E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene58617 | 0.821137 | 4.74E-53 | -1.69E-46 |
| MS.gene060637 | MS.gene58617 | 0.807841 | 4.15E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene58617 | 0.835121 | 2.02E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene58617 | 0.805745 | 1.15E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene58617 | 0.811067 | 8.43E-51 | -1.69E-46 |
| MS.gene060852 | MS.gene58617 | 0.809469 | 1.86E-50 | -1.69E-46 |
| MS.gene060870 | MS.gene58617 | 0.801614 | 8.29E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene58617 | 0.814431 | 1.55E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene58617 | 0.875019 | 4.28E-68 | -1.69E-46 |
| MS.gene060935 | MS.gene58617 | 0.801186 | 1.01E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene58617 | 0.829919 | 3.93E-55 | -1.69E-46 |
| MS.gene061006 | MS.gene58617 | 0.811966 | 5.37E-51 | -1.69E-46 |
| MS.gene06121 | MS.gene58617 | 0.823599 | 1.27E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58617.t1 | MTR_2g437390 | 99.762 | 420 | 1 | 0 | 1 | 420 | 1 | 420 | 0.0 | 874 |
| MS.gene58617.t1 | MTR_4g119413 | 92.619 | 420 | 31 | 0 | 1 | 420 | 3 | 422 | 0.0 | 816 |
| MS.gene58617.t1 | MTR_4g119413 | 92.619 | 420 | 31 | 0 | 1 | 420 | 3 | 422 | 0.0 | 812 |
| MS.gene58617.t1 | MTR_7g108340 | 74.163 | 418 | 102 | 1 | 3 | 420 | 2 | 413 | 0.0 | 659 |
| MS.gene58617.t1 | MTR_4g119490 | 55.500 | 200 | 89 | 0 | 7 | 206 | 5 | 204 | 3.26e-74 | 231 |
| MS.gene58617.t1 | MTR_4g119450 | 54.412 | 204 | 89 | 2 | 5 | 206 | 3 | 204 | 1.54e-70 | 221 |
| MS.gene58617.t1 | MTR_4g119422 | 52.489 | 221 | 97 | 3 | 7 | 222 | 3 | 220 | 7.19e-67 | 218 |
| MS.gene58617.t1 | MTR_4g119930 | 52.683 | 205 | 94 | 1 | 2 | 206 | 4 | 205 | 1.33e-64 | 206 |
| MS.gene58617.t1 | MTR_4g119930 | 57.692 | 156 | 63 | 1 | 2 | 157 | 4 | 156 | 3.53e-52 | 173 |
| MS.gene58617.t1 | MTR_6g011700 | 29.921 | 381 | 238 | 9 | 43 | 420 | 49 | 403 | 1.36e-46 | 171 |
| MS.gene58617.t1 | MTR_6g011770 | 28.261 | 414 | 261 | 11 | 10 | 420 | 23 | 403 | 2.58e-45 | 167 |
| MS.gene58617.t1 | MTR_8g056030 | 29.396 | 381 | 240 | 9 | 43 | 420 | 51 | 405 | 2.90e-45 | 167 |
| MS.gene58617.t1 | MTR_4g119930 | 50.318 | 157 | 78 | 0 | 50 | 206 | 1 | 157 | 4.62e-44 | 151 |
| MS.gene58617.t1 | MTR_5g039880 | 28.536 | 403 | 255 | 11 | 23 | 420 | 32 | 406 | 2.71e-38 | 147 |
| MS.gene58617.t1 | MTR_5g039890 | 27.089 | 347 | 231 | 8 | 43 | 387 | 49 | 375 | 1.32e-37 | 142 |
| MS.gene58617.t1 | MTR_3g115680 | 37.500 | 184 | 103 | 3 | 2 | 182 | 4 | 178 | 1.73e-34 | 127 |
| MS.gene58617.t1 | MTR_7g039440 | 26.710 | 307 | 206 | 6 | 76 | 380 | 5 | 294 | 2.79e-33 | 127 |
| MS.gene58617.t1 | MTR_7g039680 | 26.377 | 345 | 215 | 8 | 43 | 385 | 49 | 356 | 5.84e-33 | 127 |
| MS.gene58617.t1 | MTR_5g040180 | 26.710 | 307 | 206 | 5 | 76 | 380 | 69 | 358 | 7.37e-33 | 127 |
| MS.gene58617.t1 | MTR_7g039690 | 26.585 | 410 | 232 | 13 | 32 | 420 | 21 | 382 | 1.85e-29 | 121 |
| MS.gene58617.t1 | MTR_7g039430 | 28.516 | 256 | 174 | 5 | 76 | 329 | 69 | 317 | 4.28e-29 | 117 |
| MS.gene58617.t1 | MTR_5g040190 | 27.240 | 279 | 194 | 5 | 76 | 352 | 69 | 340 | 8.34e-29 | 116 |
| MS.gene58617.t1 | MTR_1g040995 | 26.545 | 275 | 182 | 6 | 92 | 363 | 102 | 359 | 2.92e-28 | 118 |
| MS.gene58617.t1 | MTR_1g040995 | 26.354 | 277 | 184 | 5 | 144 | 420 | 373 | 629 | 8.51e-24 | 104 |
| MS.gene58617.t1 | MTR_1g040925 | 26.545 | 275 | 182 | 6 | 92 | 363 | 102 | 359 | 3.03e-28 | 118 |
| MS.gene58617.t1 | MTR_1g040925 | 25.887 | 282 | 188 | 6 | 139 | 419 | 367 | 628 | 3.73e-23 | 102 |
| MS.gene58617.t1 | MTR_2g019260 | 25.635 | 394 | 251 | 12 | 34 | 420 | 110 | 468 | 9.17e-28 | 116 |
| MS.gene58617.t1 | MTR_2g019260 | 25.635 | 394 | 251 | 12 | 34 | 420 | 110 | 468 | 1.15e-27 | 116 |
| MS.gene58617.t1 | MTR_7g039660 | 24.471 | 331 | 217 | 7 | 92 | 420 | 95 | 394 | 1.03e-25 | 110 |
| MS.gene58617.t1 | MTR_5g039770 | 24.214 | 318 | 199 | 4 | 89 | 403 | 36 | 314 | 1.53e-23 | 103 |
| MS.gene58617.t1 | MTR_7g039790 | 24.843 | 318 | 196 | 5 | 89 | 403 | 100 | 377 | 2.23e-23 | 103 |
| MS.gene58617.t1 | MTR_7g445240 | 24.843 | 318 | 196 | 5 | 89 | 403 | 100 | 377 | 2.37e-23 | 103 |
| MS.gene58617.t1 | MTR_4g131910 | 55.422 | 83 | 36 | 1 | 1 | 83 | 1 | 82 | 6.35e-22 | 94.4 |
| MS.gene58617.t1 | MTR_4g131905 | 43.564 | 101 | 45 | 4 | 45 | 145 | 57 | 145 | 4.27e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58617.t1 | AT4G02570 | 79.904 | 418 | 81 | 1 | 3 | 420 | 2 | 416 | 0.0 | 709 |
| MS.gene58617.t1 | AT4G02570 | 79.904 | 418 | 81 | 1 | 3 | 420 | 2 | 416 | 0.0 | 709 |
| MS.gene58617.t1 | AT4G02570 | 79.904 | 418 | 81 | 1 | 3 | 420 | 2 | 416 | 0.0 | 709 |
| MS.gene58617.t1 | AT4G02570 | 79.904 | 418 | 81 | 1 | 3 | 420 | 2 | 416 | 0.0 | 709 |
| MS.gene58617.t1 | AT1G43140 | 63.571 | 420 | 145 | 2 | 4 | 422 | 12 | 424 | 0.0 | 566 |
| MS.gene58617.t1 | AT1G02980 | 59.574 | 423 | 167 | 4 | 1 | 421 | 1 | 421 | 0.0 | 537 |
| MS.gene58617.t1 | AT1G02980 | 59.574 | 423 | 167 | 4 | 1 | 421 | 1 | 421 | 0.0 | 537 |
| MS.gene58617.t1 | AT1G59790 | 57.552 | 384 | 142 | 3 | 1 | 382 | 6 | 370 | 5.41e-157 | 448 |
| MS.gene58617.t1 | AT1G59790 | 57.527 | 372 | 137 | 3 | 1 | 370 | 6 | 358 | 1.01e-151 | 435 |
| MS.gene58617.t1 | AT1G59800 | 54.098 | 244 | 108 | 1 | 7 | 250 | 7 | 246 | 1.13e-91 | 277 |
| MS.gene58617.t1 | AT1G69670 | 30.000 | 380 | 239 | 9 | 43 | 420 | 52 | 406 | 4.36e-47 | 172 |
| MS.gene58617.t1 | AT1G69670 | 30.000 | 380 | 239 | 9 | 43 | 420 | 52 | 406 | 4.36e-47 | 172 |
| MS.gene58617.t1 | AT1G26830 | 28.571 | 420 | 252 | 10 | 10 | 420 | 26 | 406 | 6.40e-47 | 172 |
| MS.gene58617.t1 | AT5G46210 | 26.064 | 376 | 235 | 13 | 37 | 404 | 113 | 453 | 3.63e-21 | 96.7 |
Find 85 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCGTTTCTTTCACTATT+TGG | 0.108715 | 2.3:+54247222 | MS.gene58617:CDS |
| CAGGTTTACAAGGAAGTAAA+TGG | 0.245353 | 2.3:+54247422 | MS.gene58617:intron |
| CACAACCTGCTTAAATATAC+TGG | 0.307077 | 2.3:-54248320 | None:intergenic |
| TTAGATATATTTGTGGAGAT+TGG | 0.327866 | 2.3:+54247608 | MS.gene58617:CDS |
| AATCAGGACAAGAATCTTCT+AGG | 0.335743 | 2.3:-54247724 | None:intergenic |
| GCTGACTTGCTTTCGCGATT+TGG | 0.336069 | 2.3:+54247294 | MS.gene58617:CDS |
| ACAGAAGCTGAAGAATATTC+TGG | 0.348230 | 2.3:+54244515 | MS.gene58617:CDS |
| TGTGGAATAGAGTATGATTC+TGG | 0.367247 | 2.3:-54249725 | None:intergenic |
| ACCATAAAATCATGGTTAGA+TGG | 0.374090 | 2.3:+54247197 | MS.gene58617:CDS |
| GCTTGAAACGGGAGAAAGAT+AGG | 0.374850 | 2.3:+54247841 | MS.gene58617:CDS |
| CACCAACGTTGTACCTTCTT+CGG | 0.375640 | 2.3:-54248467 | None:intergenic |
| CTTCCTCCGCTTAATGAAGT+TGG | 0.395619 | 2.3:+54247271 | MS.gene58617:CDS |
| TTCTAAAATACCCAAAGGCT+TGG | 0.406125 | 2.3:+54248288 | MS.gene58617:CDS |
| TGTGATAATATTCTCAAGAA+AGG | 0.408911 | 2.3:+54249900 | MS.gene58617:CDS |
| TCAGAGCTGAACTGAGGTTC+AGG | 0.411217 | 2.3:-54244546 | None:intergenic |
| TTCCTCCGCTTAATGAAGTT+GGG | 0.422753 | 2.3:+54247272 | MS.gene58617:CDS |
| AGCGGTTGGGAATAGTCATT+TGG | 0.424285 | 2.3:-54244712 | None:intergenic |
| AATGTCTGCAGCCGGAGAAA+AGG | 0.425273 | 2.3:+54249530 | MS.gene58617:intron |
| GGAGATTGGAATGGGGCATA+TGG | 0.426092 | 2.3:+54247622 | MS.gene58617:CDS |
| TAGCGAGCCCAAGTTATTAG+AGG | 0.429320 | 2.3:+54247887 | MS.gene58617:CDS |
| TGCTTAAATATACTGGAAAC+AGG | 0.431414 | 2.3:-54248313 | None:intergenic |
| GGAAACAGGATCCAAGCCTT+TGG | 0.432362 | 2.3:-54248299 | None:intergenic |
| ATTCTCGAAAGGCTTCAAAC+TGG | 0.437747 | 2.3:+54247699 | MS.gene58617:CDS |
| GAAACAGGATCCAAGCCTTT+GGG | 0.444806 | 2.3:-54248298 | None:intergenic |
| ATATTTGTGGAGATTGGAAT+GGG | 0.445460 | 2.3:+54247614 | MS.gene58617:CDS |
| CGGAGAAAAGGGATATTGTT+GGG | 0.453652 | 2.3:+54249542 | MS.gene58617:CDS |
| ATGTCTGCAGCCGGAGAAAA+GGG | 0.463275 | 2.3:+54249531 | MS.gene58617:intron |
| AGAATATACCTCTAATAACT+TGG | 0.467807 | 2.3:-54247895 | None:intergenic |
| GGCGGAGGAGTGCTTGAAAC+GGG | 0.472033 | 2.3:+54247830 | MS.gene58617:intron |
| CCGGAGAAAAGGGATATTGT+TGG | 0.478111 | 2.3:+54249541 | MS.gene58617:CDS |
| TGTTTCCAGTATATTTAAGC+AGG | 0.481609 | 2.3:+54248315 | MS.gene58617:CDS |
| TGGATCGATACTTTATTGCT+CGG | 0.482660 | 2.3:+54247242 | MS.gene58617:CDS |
| TATTGTTGGGTTACAAGAGC+AGG | 0.483324 | 2.3:+54249555 | MS.gene58617:CDS |
| AAATGTATTAGATATATTTG+TGG | 0.483791 | 2.3:+54247601 | MS.gene58617:CDS |
| AATACCTTGAGCATATAATC+AGG | 0.490182 | 2.3:-54247740 | None:intergenic |
| AACCGCTGTATGATAAGTAC+AGG | 0.495768 | 2.3:+54244728 | MS.gene58617:CDS |
| AGGTTTACAAGGAAGTAAAT+GGG | 0.502271 | 2.3:+54247423 | MS.gene58617:intron |
| ATGCAGCATGTTACCGAAGA+AGG | 0.506218 | 2.3:+54248454 | MS.gene58617:intron |
| TATATTTGTGGAGATTGGAA+TGG | 0.508425 | 2.3:+54247613 | MS.gene58617:CDS |
| CTATTGATTTAGAGCAAGGA+TGG | 0.515189 | 2.3:+54244472 | MS.gene58617:CDS |
| AGGTACAACGTTGGTGAAGT+TGG | 0.516536 | 2.3:+54248474 | MS.gene58617:CDS |
| TAAGTACAGGGAGGCATTTG+AGG | 0.519320 | 2.3:+54244741 | MS.gene58617:CDS |
| TTCTGCATATTATTCTCGAA+AGG | 0.520286 | 2.3:+54247688 | MS.gene58617:CDS |
| TGCGAGAACTTGTGAGGAGG+TGG | 0.525524 | 2.3:+54247170 | MS.gene58617:CDS |
| GGTTGGGAATAGTCATTTGG+AGG | 0.527736 | 2.3:-54244709 | None:intergenic |
| GTACTTATCATACAGCGGTT+GGG | 0.527755 | 2.3:-54244725 | None:intergenic |
| TGTACTTATCATACAGCGGT+TGG | 0.527818 | 2.3:-54244726 | None:intergenic |
| TTATCAATTCCAGGTTTACA+AGG | 0.528929 | 2.3:+54247412 | MS.gene58617:intron |
| AAGACTATTGATTTAGAGCA+AGG | 0.536063 | 2.3:+54244468 | MS.gene58617:CDS |
| TCGTGCTTCTCTCTCAAAGA+AGG | 0.537882 | 2.3:-54247136 | None:intergenic |
| TTGTCCTGATTATATGCTCA+AGG | 0.542877 | 2.3:+54247736 | MS.gene58617:CDS |
| AGGCGGAGGAGTGCTTGAAA+CGG | 0.547934 | 2.3:+54247829 | MS.gene58617:intron |
| GAATATACCTCTAATAACTT+GGG | 0.556355 | 2.3:-54247894 | None:intergenic |
| GTGGGCTAACCATAAAATCA+TGG | 0.561200 | 2.3:+54247189 | MS.gene58617:CDS |
| AACAGTCGTTCACATATGCC+AGG | 0.571635 | 2.3:-54249701 | None:intergenic |
| AATTGAAGAAACACTTGAGA+AGG | 0.575640 | 2.3:+54249950 | MS.gene58617:CDS |
| CTTAGGTTGAAGACTTGTCA+AGG | 0.575826 | 2.3:+54248251 | MS.gene58617:intron |
| TGCAGAAGTGTCTTTGAGCA+TGG | 0.576831 | 2.3:-54247672 | None:intergenic |
| TGGGCTCGCTACTAGAGTGC+AGG | 0.577235 | 2.3:-54247875 | None:intergenic |
| TATTGATTTAGAGCAAGGAT+GGG | 0.578636 | 2.3:+54244473 | MS.gene58617:CDS |
| AAGCTGAAGAATATTCTGGA+AGG | 0.583829 | 2.3:+54244519 | MS.gene58617:CDS |
| CTTGAAACGGGAGAAAGATA+GGG | 0.592854 | 2.3:+54247842 | MS.gene58617:CDS |
| AGAACATACAAGAGAAATCA+CGG | 0.593996 | 2.3:-54247459 | None:intergenic |
| AGGGATTATCGATGAGTGAA+CGG | 0.601104 | 2.3:+54244445 | None:intergenic |
| AGCTGAAGAATATTCTGGAA+GGG | 0.602844 | 2.3:+54244520 | MS.gene58617:CDS |
| GTCAGCCCAACTTCATTAAG+CGG | 0.606052 | 2.3:-54247277 | None:intergenic |
| AAGATTGATCAAGAACGTGA+AGG | 0.609119 | 2.3:+54247551 | MS.gene58617:intron |
| AGATGCAGCAAGTAACAAGA+AGG | 0.609700 | 2.3:+54248501 | MS.gene58617:CDS |
| TTATGTTGCGAGAACTTGTG+AGG | 0.624498 | 2.3:+54247164 | MS.gene58617:CDS |
| GATAATATTCTCAAGAAAGG+CGG | 0.632646 | 2.3:+54249903 | MS.gene58617:CDS |
| TGCATTACTTAGAGATGACA+AGG | 0.635739 | 2.3:+54248147 | MS.gene58617:CDS |
| ATCGATACTTTATTGCTCGG+AGG | 0.640352 | 2.3:+54247245 | MS.gene58617:CDS |
| TATCCTATAGGCTCTTAAGG+AGG | 0.649623 | 2.3:+54249812 | MS.gene58617:intron |
| AGCCCAACTTCATTAAGCGG+AGG | 0.655556 | 2.3:-54247274 | None:intergenic |
| TGAGCTGCATGACAAGTACC+TGG | 0.655887 | 2.3:+54249683 | MS.gene58617:CDS |
| TATTTGTGGAGATTGGAATG+GGG | 0.661334 | 2.3:+54247615 | MS.gene58617:CDS |
| GCGAGAACTTGTGAGGAGGT+GGG | 0.667854 | 2.3:+54247171 | MS.gene58617:CDS |
| TCCCTGTACTTATCATACAG+CGG | 0.679899 | 2.3:-54244730 | None:intergenic |
| TGAACCTCAGTTCAGCTCTG+AGG | 0.696799 | 2.3:+54244548 | MS.gene58617:CDS |
| TGTTGCGAGAACTTGTGAGG+AGG | 0.698023 | 2.3:+54247167 | MS.gene58617:CDS |
| ACCGCTGTATGATAAGTACA+GGG | 0.699917 | 2.3:+54244729 | MS.gene58617:CDS |
| TAGTCCTCAGAGCTGAACTG+AGG | 0.704381 | 2.3:-54244552 | None:intergenic |
| GAATCATACTCTATTCCACA+AGG | 0.714768 | 2.3:+54249728 | MS.gene58617:CDS |
| TACCGAAGAAGGTACAACGT+TGG | 0.733065 | 2.3:+54248465 | MS.gene58617:CDS |
| GCTGTATGATAAGTACAGGG+AGG | 0.780823 | 2.3:+54244732 | MS.gene58617:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAACACAT+TGG | - | chr2.3:54247390-54247409 | None:intergenic | 10.0% |
| !! | TGTAAAAAAAAAAAAATATC+GGG | + | chr2.3:54245830-54245849 | MS.gene58617:intron | 10.0% |
| !!! | GTTTTAGTTTTATATTAATT+GGG | + | chr2.3:54244607-54244626 | MS.gene58617:intron | 10.0% |
| !!! | TGTTTTAGTTTTATATTAAT+TGG | + | chr2.3:54244606-54244625 | MS.gene58617:intron | 10.0% |
| !! | AAATGTATTAGATATATTTG+TGG | + | chr2.3:54247601-54247620 | MS.gene58617:CDS | 15.0% |
| !! | AGAAGGAAAATTATAAATAT+AGG | - | chr2.3:54248353-54248372 | None:intergenic | 15.0% |
| !! | ATTCAGTTTATGTTTATAAT+AGG | + | chr2.3:54249361-54249380 | MS.gene58617:intron | 15.0% |
| !!! | AAGACTTCTATATAATTTTA+AGG | + | chr2.3:54249115-54249134 | MS.gene58617:intron | 15.0% |
| !!! | ATAATTTTAAGGATTCATTA+AGG | + | chr2.3:54249126-54249145 | MS.gene58617:intron | 15.0% |
| !!! | ATGAAATGATTTATTTTTCT+TGG | + | chr2.3:54246923-54246942 | MS.gene58617:intron | 15.0% |
| !!! | ATGTCTATTTTTTACTTTAT+AGG | + | chr2.3:54245044-54245063 | MS.gene58617:intron | 15.0% |
| !!! | TAATTTTAAGGATTCATTAA+GGG | + | chr2.3:54249127-54249146 | MS.gene58617:intron | 15.0% |
| !!! | TGAAATGATTTATTTTTCTT+GGG | + | chr2.3:54246924-54246943 | MS.gene58617:intron | 15.0% |
| !!! | TGTCTATTTTTTACTTTATA+GGG | + | chr2.3:54245045-54245064 | MS.gene58617:intron | 15.0% |
| !!! | TTTTTTTTTTTATCAATTCC+AGG | + | chr2.3:54247403-54247422 | MS.gene58617:intron | 15.0% |
| !! | AAACAGAAGCTAAATAATAT+TGG | - | chr2.3:54247789-54247808 | None:intergenic | 20.0% |
| !! | AACATTTCACAAAGAAAAAA+AGG | - | chr2.3:54248050-54248069 | None:intergenic | 20.0% |
| !! | AATTGATATTGATCCATTTA+TGG | + | chr2.3:54249614-54249633 | MS.gene58617:intron | 20.0% |
| !! | ATGTATTCTTATTGTGTAAA+TGG | + | chr2.3:54246189-54246208 | MS.gene58617:intron | 20.0% |
| !! | ATTAACAGATACATAATCAA+AGG | - | chr2.3:54247055-54247074 | None:intergenic | 20.0% |
| !! | ATTCATTAAGGGAATATAAA+AGG | + | chr2.3:54249138-54249157 | MS.gene58617:intron | 20.0% |
| !! | CTATATATGTTGTCAAAATT+GGG | + | chr2.3:54248371-54248390 | MS.gene58617:intron | 20.0% |
| !! | TACATAATCAAAGGAAAAAA+CGG | - | chr2.3:54247046-54247065 | None:intergenic | 20.0% |
| !! | TATATATGTTGTCAAAATTG+GGG | + | chr2.3:54248372-54248391 | MS.gene58617:intron | 20.0% |
| !! | TCTATATATGTTGTCAAAAT+TGG | + | chr2.3:54248370-54248389 | MS.gene58617:intron | 20.0% |
| !! | TTAGTTAACTTACTAATAGT+TGG | + | chr2.3:54246658-54246677 | MS.gene58617:intron | 20.0% |
| !! | TTGCAGTTAAACTATAAAAT+TGG | - | chr2.3:54249596-54249615 | None:intergenic | 20.0% |
| !!! | AAATGATTTATTTTTCTTGG+GGG | + | chr2.3:54246926-54246945 | MS.gene58617:intron | 20.0% |
| !!! | AAGATTATTACTATTTTGCT+TGG | - | chr2.3:54249043-54249062 | None:intergenic | 20.0% |
| !!! | AATTTAAAATACAATCAGAC+AGG | - | chr2.3:54244826-54244845 | None:intergenic | 20.0% |
| !!! | ATAACTGAAATTCACTTTTT+GGG | + | chr2.3:54247101-54247120 | MS.gene58617:intron | 20.0% |
| !!! | ATTATTTCTTAATCTGGATT+GGG | + | chr2.3:54245895-54245914 | MS.gene58617:intron | 20.0% |
| !!! | ATTTTGACAACATATATAGA+AGG | - | chr2.3:54248370-54248389 | None:intergenic | 20.0% |
| !!! | GAAATGATTTATTTTTCTTG+GGG | + | chr2.3:54246925-54246944 | MS.gene58617:intron | 20.0% |
| !!! | TGATTGATAATTTTCAACTT+AGG | + | chr2.3:54248677-54248696 | MS.gene58617:intron | 20.0% |
| !!! | TGTATATTATTTTCTGTTAC+TGG | + | chr2.3:54248700-54248719 | MS.gene58617:intron | 20.0% |
| !!! | TTATGATTTAAGACAGAATT+GGG | - | chr2.3:54246581-54246600 | None:intergenic | 20.0% |
| ! | AAATGACACTAAATATGACA+CGG | - | chr2.3:54248825-54248844 | None:intergenic | 25.0% |
| ! | AGAATATACCTCTAATAACT+TGG | - | chr2.3:54247898-54247917 | None:intergenic | 25.0% |
| ! | AGGTTATATAAATAAAACCC+AGG | + | chr2.3:54245968-54245987 | MS.gene58617:intron | 25.0% |
| ! | ATCTTTAAACAAAAGAGGAT+AGG | - | chr2.3:54247536-54247555 | None:intergenic | 25.0% |
| ! | ATGTAAAGCACAAAATCAAA+CGG | - | chr2.3:54249463-54249482 | None:intergenic | 25.0% |
| ! | ATTGTAACACAAATTTGAAC+AGG | - | chr2.3:54248631-54248650 | None:intergenic | 25.0% |
| ! | CTGCTTCAATTTAGAAAAAT+AGG | - | chr2.3:54245940-54245959 | None:intergenic | 25.0% |
| ! | GAATATACCTCTAATAACTT+GGG | - | chr2.3:54247897-54247916 | None:intergenic | 25.0% |
| ! | GAGAATATTATCACAAAAAG+TGG | - | chr2.3:54249895-54249914 | None:intergenic | 25.0% |
| ! | GATCAATCTTTAAACAAAAG+AGG | - | chr2.3:54247541-54247560 | None:intergenic | 25.0% |
| ! | GATCGTAATATCCTATTAAT+AGG | - | chr2.3:54246388-54246407 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | - | chr2.3:54245724-54245743 | None:intergenic | 25.0% |
| ! | TGTGATAATATTCTCAAGAA+AGG | + | chr2.3:54249900-54249919 | MS.gene58617:CDS | 25.0% |
| ! | TGTTTACGCATAAATTCAAA+AGG | + | chr2.3:54248989-54249008 | MS.gene58617:intron | 25.0% |
| ! | TTAGATATATTTGTGGAGAT+TGG | + | chr2.3:54247608-54247627 | MS.gene58617:CDS | 25.0% |
| ! | TTAGCTTCTGTTTAATATTG+TGG | + | chr2.3:54247796-54247815 | MS.gene58617:intron | 25.0% |
| !! | AAAGAAAATTTTGTCCGATA+AGG | - | chr2.3:54249398-54249417 | None:intergenic | 25.0% |
| !! | CTTATGATTTAAGACAGAAT+TGG | - | chr2.3:54246582-54246601 | None:intergenic | 25.0% |
| !! | CTTTTAGGCAGTAATAAAAA+AGG | - | chr2.3:54246841-54246860 | None:intergenic | 25.0% |
| !! | GATTATTTCTTAATCTGGAT+TGG | + | chr2.3:54245894-54245913 | MS.gene58617:intron | 25.0% |
| !! | GCTTGGTAATAACATTTATA+AGG | - | chr2.3:54249026-54249045 | None:intergenic | 25.0% |
| !! | TCCTCAACAAAATAATGTTT+TGG | + | chr2.3:54245246-54245265 | MS.gene58617:intron | 25.0% |
| !! | TCTGAAAGATTTTATCCTAT+AGG | + | chr2.3:54249800-54249819 | MS.gene58617:intron | 25.0% |
| !! | TTTTTACTTTATAGGGCTAT+TGG | + | chr2.3:54245052-54245071 | MS.gene58617:intron | 25.0% |
| !!! | AATGATTTATTTTTCTTGGG+GGG | + | chr2.3:54246927-54246946 | MS.gene58617:intron | 25.0% |
| !!! | AATGTTCTTTTTCAAGAAGT+TGG | - | chr2.3:54248117-54248136 | None:intergenic | 25.0% |
| !!! | CATAACTGAAATTCACTTTT+TGG | + | chr2.3:54247100-54247119 | MS.gene58617:intron | 25.0% |
| !!! | GTACACTTTTTCCTATTAAT+AGG | + | chr2.3:54246374-54246393 | MS.gene58617:intron | 25.0% |
| !!! | TCCAAAACATTATTTTGTTG+AGG | - | chr2.3:54245250-54245269 | None:intergenic | 25.0% |
| !!! | TGGGTTTTATTTATATAACC+TGG | - | chr2.3:54245969-54245988 | None:intergenic | 25.0% |
| !!! | TTGATTTTTGAGTAAGTAGT+TGG | + | chr2.3:54245306-54245325 | MS.gene58617:intron | 25.0% |
| !!! | TTTGAGATATTTTGCAACAA+GGG | + | chr2.3:54249837-54249856 | MS.gene58617:CDS | 25.0% |
| !!! | TTTTGAGATATTTTGCAACA+AGG | + | chr2.3:54249836-54249855 | MS.gene58617:CDS | 25.0% |
| AAAACTAGTACCGCAATAAT+CGG | + | chr2.3:54248593-54248612 | MS.gene58617:intron | 30.0% | |
| AAGTAACTGAACTAAAACAG+AGG | - | chr2.3:54246163-54246182 | None:intergenic | 30.0% | |
| AATACCTTGAGCATATAATC+AGG | - | chr2.3:54247743-54247762 | None:intergenic | 30.0% | |
| AATATTGTGGCATTCATTAC+AGG | + | chr2.3:54247809-54247828 | MS.gene58617:intron | 30.0% | |
| AATTGAAGAAACACTTGAGA+AGG | + | chr2.3:54249950-54249969 | MS.gene58617:CDS | 30.0% | |
| ACCATAAAATCATGGTTAGA+TGG | + | chr2.3:54247197-54247216 | MS.gene58617:CDS | 30.0% | |
| AGAACATACAAGAGAAATCA+CGG | - | chr2.3:54247462-54247481 | None:intergenic | 30.0% | |
| AGGTTTACAAGGAAGTAAAT+GGG | + | chr2.3:54247423-54247442 | MS.gene58617:intron | 30.0% | |
| ATATTTGTGGAGATTGGAAT+GGG | + | chr2.3:54247614-54247633 | MS.gene58617:CDS | 30.0% | |
| ATTATACGATCATAACCTTG+TGG | - | chr2.3:54249746-54249765 | None:intergenic | 30.0% | |
| CTACTAATAGAAAACTCTGA+AGG | - | chr2.3:54247335-54247354 | None:intergenic | 30.0% | |
| CTATAATTATCTAGTCCATG+TGG | - | chr2.3:54245284-54245303 | None:intergenic | 30.0% | |
| CTTCTTGAAAAAGAACATTC+TGG | + | chr2.3:54248118-54248137 | MS.gene58617:CDS | 30.0% | |
| GATAATATTCTCAAGAAAGG+CGG | + | chr2.3:54249903-54249922 | MS.gene58617:CDS | 30.0% | |
| GATTCCAAAATTTAGAGATC+TGG | - | chr2.3:54246479-54246498 | None:intergenic | 30.0% | |
| GGTAAATTGTTTGCAAAATG+AGG | - | chr2.3:54249433-54249452 | None:intergenic | 30.0% | |
| GGTACTATTTAAGCGTAATA+TGG | + | chr2.3:54248168-54248187 | MS.gene58617:intron | 30.0% | |
| TAAATTAAAATGTCTGCAGC+CGG | + | chr2.3:54249522-54249541 | MS.gene58617:intron | 30.0% | |
| TAACTAAAGCTAGTTAGAGA+GGG | - | chr2.3:54246645-54246664 | None:intergenic | 30.0% | |
| TAAGATTTGGACAATACAGA+AGG | - | chr2.3:54249326-54249345 | None:intergenic | 30.0% | |
| TATATTTGTGGAGATTGGAA+TGG | + | chr2.3:54247613-54247632 | MS.gene58617:CDS | 30.0% | |
| TCATGTTCTTCATGAACTTA+TGG | + | chr2.3:54246238-54246257 | MS.gene58617:intron | 30.0% | |
| TCTTAACACTCTGTGTAAAT+TGG | + | chr2.3:54248912-54248931 | MS.gene58617:intron | 30.0% | |
| TCTTCAACCTAAGCATTTAA+AGG | - | chr2.3:54248244-54248263 | None:intergenic | 30.0% | |
| TGCTTAAATATACTGGAAAC+AGG | - | chr2.3:54248316-54248335 | None:intergenic | 30.0% | |
| TGTGTCTCTTAAAATTTGAC+TGG | + | chr2.3:54246794-54246813 | MS.gene58617:intron | 30.0% | |
| TGTTTCCAGTATATTTAAGC+AGG | + | chr2.3:54248315-54248334 | MS.gene58617:CDS | 30.0% | |
| TTAACTAAAGCTAGTTAGAG+AGG | - | chr2.3:54246646-54246665 | None:intergenic | 30.0% | |
| TTATAGCGTCATTAGTTGAT+TGG | + | chr2.3:54246743-54246762 | MS.gene58617:intron | 30.0% | |
| TTATCAATTCCAGGTTTACA+AGG | + | chr2.3:54247412-54247431 | MS.gene58617:intron | 30.0% | |
| TTCTCGTTTCTTTCACTATT+TGG | + | chr2.3:54247222-54247241 | MS.gene58617:CDS | 30.0% | |
| TTCTGCATATTATTCTCGAA+AGG | + | chr2.3:54247688-54247707 | MS.gene58617:CDS | 30.0% | |
| ! | AATAGTGGTTTGTCCAAATT+CGG | + | chr2.3:54245770-54245789 | MS.gene58617:intron | 30.0% |
| ! | CTTTTCTATTGCAATAATCG+AGG | + | chr2.3:54248570-54248589 | MS.gene58617:intron | 30.0% |
| ! | TGACGCATTTTCTTCTTTTT+AGG | + | chr2.3:54245153-54245172 | MS.gene58617:intron | 30.0% |
| ! | TGATCCAGATCTCTAAATTT+TGG | + | chr2.3:54246472-54246491 | MS.gene58617:intron | 30.0% |
| ! | TGTTTGCAACTTTTCTACTA+GGG | + | chr2.3:54244970-54244989 | MS.gene58617:intron | 30.0% |
| ! | TTGCTATTATTCCAGCTATT+TGG | + | chr2.3:54247917-54247936 | MS.gene58617:intron | 30.0% |
| ! | TTGTTTGCAACTTTTCTACT+AGG | + | chr2.3:54244969-54244988 | MS.gene58617:intron | 30.0% |
| ! | TTTACACAGAGTGTTAAGAT+AGG | - | chr2.3:54248911-54248930 | None:intergenic | 30.0% |
| ! | TTTGTAGTTGTCCTTATTTC+TGG | + | chr2.3:54248535-54248554 | MS.gene58617:intron | 30.0% |
| ! | TTTTATCCTATAGGCTCTTA+AGG | + | chr2.3:54249809-54249828 | MS.gene58617:intron | 30.0% |
| ! | TTTTCTAAATTGAAGCAGCT+TGG | + | chr2.3:54245942-54245961 | MS.gene58617:intron | 30.0% |
| !! | AAAGTAGTTGGTAGCAAAAA+GGG | - | chr2.3:54245526-54245545 | None:intergenic | 30.0% |
| !! | AAGACTATTGATTTAGAGCA+AGG | + | chr2.3:54244468-54244487 | MS.gene58617:CDS | 30.0% |
| !! | TATTGATTTAGAGCAAGGAT+GGG | + | chr2.3:54244473-54244492 | MS.gene58617:CDS | 30.0% |
| !!! | CCCAGGTTTTAAAATGAAAA+CGG | + | chr2.3:54245985-54246004 | MS.gene58617:intron | 30.0% |
| !!! | CCGTTTTCATTTTAAAACCT+GGG | - | chr2.3:54245988-54246007 | None:intergenic | 30.0% |
| !!! | CTCTTTTCTAAAATACCCAA+AGG | + | chr2.3:54248283-54248302 | MS.gene58617:CDS | 30.0% |
| !!! | GGTTTTAAAATGAAAACGGA+AGG | + | chr2.3:54245989-54246008 | MS.gene58617:intron | 30.0% |
| !!! | TCCGTTTTCATTTTAAAACC+TGG | - | chr2.3:54245989-54246008 | None:intergenic | 30.0% |
| AAAAAAAAATATCGGGCGTG+TGG | + | chr2.3:54245837-54245856 | MS.gene58617:intron | 35.0% | |
| AAACAGAGAAACTAAGGGAA+AGG | - | chr2.3:54246106-54246125 | None:intergenic | 35.0% | |
| AAATGTCTGACCATGTTATG+TGG | - | chr2.3:54245361-54245380 | None:intergenic | 35.0% | |
| AAATTATTGGGATCGTGAGT+TGG | + | chr2.3:54245862-54245881 | MS.gene58617:intron | 35.0% | |
| AACACCCACTAAATACCTTT+GGG | + | chr2.3:54245601-54245620 | MS.gene58617:intron | 35.0% | |
| AACAGAGAAACTAAGGGAAA+GGG | - | chr2.3:54246105-54246124 | None:intergenic | 35.0% | |
| AAGATTGATCAAGAACGTGA+AGG | + | chr2.3:54247551-54247570 | MS.gene58617:intron | 35.0% | |
| AAGCTGAAGAATATTCTGGA+AGG | + | chr2.3:54244519-54244538 | MS.gene58617:CDS | 35.0% | |
| AATCAGGACAAGAATCTTCT+AGG | - | chr2.3:54247727-54247746 | None:intergenic | 35.0% | |
| ACAAAATCAAACGGAAGAGT+GGG | - | chr2.3:54249454-54249473 | None:intergenic | 35.0% | |
| ACACAACTAACCACATAACA+TGG | + | chr2.3:54245348-54245367 | MS.gene58617:intron | 35.0% | |
| ACAGAAGCTGAAGAATATTC+TGG | + | chr2.3:54244515-54244534 | MS.gene58617:CDS | 35.0% | |
| ACAGCTTCCTTTAAATGCTT+AGG | + | chr2.3:54248234-54248253 | MS.gene58617:intron | 35.0% | |
| ACCACTATTGTATTGTTCCA+CGG | - | chr2.3:54245759-54245778 | None:intergenic | 35.0% | |
| ACCATACACCATGTAACATT+TGG | + | chr2.3:54245453-54245472 | MS.gene58617:intron | 35.0% | |
| ACCTCACCAGATATTGTTAA+TGG | - | chr2.3:54245808-54245827 | None:intergenic | 35.0% | |
| ATAGTAACTACGAATCTCTG+TGG | + | chr2.3:54246529-54246548 | MS.gene58617:intron | 35.0% | |
| ATATCATGTCATAGGTCACA+AGG | - | chr2.3:54245130-54245149 | None:intergenic | 35.0% | |
| ATTGTATAAGACGAGATCTC+AGG | - | chr2.3:54249208-54249227 | None:intergenic | 35.0% | |
| ATTTCTCCTTTCATTCCTGA+TGG | + | chr2.3:54248403-54248422 | MS.gene58617:intron | 35.0% | |
| CACAACCTGCTTAAATATAC+TGG | - | chr2.3:54248323-54248342 | None:intergenic | 35.0% | |
| CAGGTTTACAAGGAAGTAAA+TGG | + | chr2.3:54247422-54247441 | MS.gene58617:intron | 35.0% | |
| CATACACCATGTAACATTTG+GGG | + | chr2.3:54245455-54245474 | MS.gene58617:intron | 35.0% | |
| CATTTACTTCCTTGTAAACC+TGG | - | chr2.3:54247424-54247443 | None:intergenic | 35.0% | |
| CCAATCTCAGTTTCCATAAA+TGG | - | chr2.3:54249630-54249649 | None:intergenic | 35.0% | |
| CCATACACCATGTAACATTT+GGG | + | chr2.3:54245454-54245473 | MS.gene58617:intron | 35.0% | |
| CCATTTATGGAAACTGAGAT+TGG | + | chr2.3:54249627-54249646 | MS.gene58617:intron | 35.0% | |
| CGTCATTGATATCATGTCAT+AGG | - | chr2.3:54245138-54245157 | None:intergenic | 35.0% | |
| GAATCATACTCTATTCCACA+AGG | + | chr2.3:54249728-54249747 | MS.gene58617:CDS | 35.0% | |
| GAGGACTACTTATAAGAACT+AGG | - | chr2.3:54245231-54245250 | None:intergenic | 35.0% | |
| GCAAGAAACAGAGAAACTAA+GGG | - | chr2.3:54246111-54246130 | None:intergenic | 35.0% | |
| GGATGAAGTAACTAAAACAG+AGG | - | chr2.3:54246142-54246161 | None:intergenic | 35.0% | |
| GTAAATAAGTCAAACTCGTG+TGG | - | chr2.3:54248889-54248908 | None:intergenic | 35.0% | |
| GTAACACAAATTTGAACAGG+CGG | - | chr2.3:54248628-54248647 | None:intergenic | 35.0% | |
| TAAACTGAATGATGCTAGCT+TGG | - | chr2.3:54249351-54249370 | None:intergenic | 35.0% | |
| TAACACAAATTTGAACAGGC+GGG | - | chr2.3:54248627-54248646 | None:intergenic | 35.0% | |
| TAATTATCTAGTCCATGTGG+AGG | - | chr2.3:54245281-54245300 | None:intergenic | 35.0% | |
| TAGCTGCCATTAACAATATC+TGG | + | chr2.3:54245799-54245818 | MS.gene58617:intron | 35.0% | |
| TAGTAACTACGAATCTCTGT+GGG | + | chr2.3:54246530-54246549 | MS.gene58617:intron | 35.0% | |
| TATACAATCCCAGAAGTTAC+TGG | + | chr2.3:54249220-54249239 | MS.gene58617:intron | 35.0% | |
| TATTTGTGGAGATTGGAATG+GGG | + | chr2.3:54247615-54247634 | MS.gene58617:CDS | 35.0% | |
| TCATGAAGAACATGAAACAG+AGG | - | chr2.3:54246233-54246252 | None:intergenic | 35.0% | |
| TCATGTGGCTCATTTAATTG+AGG | + | chr2.3:54246967-54246986 | MS.gene58617:intron | 35.0% | |
| TGCAAGAAACAGAGAAACTA+AGG | - | chr2.3:54246112-54246131 | None:intergenic | 35.0% | |
| TGCATTACTTAGAGATGACA+AGG | + | chr2.3:54248147-54248166 | MS.gene58617:CDS | 35.0% | |
| TGGATCGATACTTTATTGCT+CGG | + | chr2.3:54247242-54247261 | MS.gene58617:CDS | 35.0% | |
| TGGTTGTTTGTTCTTGTCTA+TGG | - | chr2.3:54245437-54245456 | None:intergenic | 35.0% | |
| TGTAGTCATTTGATCCGTAA+TGG | + | chr2.3:54244860-54244879 | MS.gene58617:intron | 35.0% | |
| TGTGGAATAGAGTATGATTC+TGG | - | chr2.3:54249728-54249747 | None:intergenic | 35.0% | |
| TTGTCCTGATTATATGCTCA+AGG | + | chr2.3:54247736-54247755 | MS.gene58617:CDS | 35.0% | |
| ! | AGCTGAAGAATATTCTGGAA+GGG | + | chr2.3:54244520-54244539 | MS.gene58617:CDS | 35.0% |
| ! | ATGTTATGTGGTTAGTTGTG+TGG | - | chr2.3:54245349-54245368 | None:intergenic | 35.0% |
| ! | CACGGGATTATTTCTTAATC+TGG | + | chr2.3:54245889-54245908 | MS.gene58617:intron | 35.0% |
| ! | CATTTAATTGAGGTGTCATG+TGG | + | chr2.3:54246977-54246996 | MS.gene58617:intron | 35.0% |
| ! | CTTTTTCCCCAAATGTTACA+TGG | - | chr2.3:54245464-54245483 | None:intergenic | 35.0% |
| ! | GATTTAAGACAGAATTGGGA+AGG | - | chr2.3:54246577-54246596 | None:intergenic | 35.0% |
| ! | GCCATCTAACCATGATTTTA+TGG | - | chr2.3:54247201-54247220 | None:intergenic | 35.0% |
| ! | GCTTGATTGTTGTTGTTGTT+TGG | + | chr2.3:54244925-54244944 | MS.gene58617:intron | 35.0% |
| !! | CAATCCCAAAGGTATTTAGT+GGG | - | chr2.3:54245608-54245627 | None:intergenic | 35.0% |
| !! | CTATTGATTTAGAGCAAGGA+TGG | + | chr2.3:54244472-54244491 | MS.gene58617:CDS | 35.0% |
| !! | CTGATTTGAATTTGCTGGAA+AGG | + | chr2.3:54246701-54246720 | MS.gene58617:intron | 35.0% |
| !! | GAAAGTAGTTGGTAGCAAAA+AGG | - | chr2.3:54245527-54245546 | None:intergenic | 35.0% |
| !! | GTCAAGCAGATTTTGCTTTT+AGG | - | chr2.3:54246856-54246875 | None:intergenic | 35.0% |
| !! | TGAGACTGATTTGAATTTGC+TGG | + | chr2.3:54246696-54246715 | MS.gene58617:intron | 35.0% |
| !! | TTCTAAAATACCCAAAGGCT+TGG | + | chr2.3:54248288-54248307 | MS.gene58617:CDS | 35.0% |
| !! | TTGAATTTTTGAGCCAACGA+TGG | + | chr2.3:54249256-54249275 | MS.gene58617:intron | 35.0% |
| !! | TTGTCCTTATTTCTGGTTGA+GGG | + | chr2.3:54248542-54248561 | MS.gene58617:intron | 35.0% |
| !! | TTTGAATTTGCTGGAAAGGA+TGG | + | chr2.3:54246705-54246724 | MS.gene58617:intron | 35.0% |
| !!! | AAATTCACTTTTTGGGCTTC+AGG | + | chr2.3:54247108-54247127 | MS.gene58617:intron | 35.0% |
| !!! | ACAGTTTTAGACCAAATAGC+TGG | - | chr2.3:54247931-54247950 | None:intergenic | 35.0% |
| AACCGCTGTATGATAAGTAC+AGG | + | chr2.3:54244728-54244747 | MS.gene58617:CDS | 40.0% | |
| ACAAAAAGTGGCAAGCAGTT+CGG | - | chr2.3:54249883-54249902 | None:intergenic | 40.0% | |
| ACAGAGAAACTAAGGGAAAG+GGG | - | chr2.3:54246104-54246123 | None:intergenic | 40.0% | |
| ACCGCTGTATGATAAGTACA+GGG | + | chr2.3:54244729-54244748 | MS.gene58617:CDS | 40.0% | |
| AGATGCAGCAAGTAACAAGA+AGG | + | chr2.3:54248501-54248520 | MS.gene58617:CDS | 40.0% | |
| ATCGATACTTTATTGCTCGG+AGG | + | chr2.3:54247245-54247264 | MS.gene58617:CDS | 40.0% | |
| ATTCTCGAAAGGCTTCAAAC+TGG | + | chr2.3:54247699-54247718 | MS.gene58617:CDS | 40.0% | |
| ATTGTGGCATTCATTACAGG+CGG | + | chr2.3:54247812-54247831 | MS.gene58617:intron | 40.0% | |
| CAACACCCACTAAATACCTT+TGG | + | chr2.3:54245600-54245619 | MS.gene58617:intron | 40.0% | |
| CACAAAATCAAACGGAAGAG+TGG | - | chr2.3:54249455-54249474 | None:intergenic | 40.0% | |
| CATCACATAGACAAACCATC+AGG | - | chr2.3:54248421-54248440 | None:intergenic | 40.0% | |
| CCCAAATGTTACATGGTGTA+TGG | - | chr2.3:54245457-54245476 | None:intergenic | 40.0% | |
| CGGAGAAAAGGGATATTGTT+GGG | + | chr2.3:54249542-54249561 | MS.gene58617:CDS | 40.0% | |
| CGTGGATAGCTGAAAATAGT+GGG | + | chr2.3:54245654-54245673 | MS.gene58617:intron | 40.0% | |
| CTATAGAGTAAAGACAGCCT+TGG | - | chr2.3:54246513-54246532 | None:intergenic | 40.0% | |
| CTCAGATCTTGTCTATGGTT+TGG | - | chr2.3:54245499-54245518 | None:intergenic | 40.0% | |
| CTTGAAACGGGAGAAAGATA+GGG | + | chr2.3:54247842-54247861 | MS.gene58617:CDS | 40.0% | |
| GACAAACCATCAGGAATGAA+AGG | - | chr2.3:54248412-54248431 | None:intergenic | 40.0% | |
| GATAACTACTAGTCCATCGT+TGG | - | chr2.3:54249272-54249291 | None:intergenic | 40.0% | |
| GATTTGGACAATACAGAAGG+AGG | - | chr2.3:54249323-54249342 | None:intergenic | 40.0% | |
| GCCATTAACAATATCTGGTG+AGG | + | chr2.3:54245804-54245823 | MS.gene58617:intron | 40.0% | |
| GGAATCAAAATGATCAGCCA+AGG | + | chr2.3:54246493-54246512 | MS.gene58617:intron | 40.0% | |
| GGACTGATTGAGAAAGTAGT+TGG | - | chr2.3:54245538-54245557 | None:intergenic | 40.0% | |
| GGGCGTGTGGAAAAATTATT+GGG | + | chr2.3:54245850-54245869 | MS.gene58617:intron | 40.0% | |
| GTACACTCAGATCTTGTCTA+TGG | - | chr2.3:54245504-54245523 | None:intergenic | 40.0% | |
| GTACTTATCATACAGCGGTT+GGG | - | chr2.3:54244728-54244747 | None:intergenic | 40.0% | |
| GTCTTTGTCCAGTAACTTCT+GGG | - | chr2.3:54249231-54249250 | None:intergenic | 40.0% | |
| TAACCCCTCAACCAGAAATA+AGG | - | chr2.3:54248549-54248568 | None:intergenic | 40.0% | |
| TAACGTGCTACATGACATGA+TGG | + | chr2.3:54248948-54248967 | MS.gene58617:intron | 40.0% | |
| TATCCTATAGGCTCTTAAGG+AGG | + | chr2.3:54249812-54249831 | MS.gene58617:intron | 40.0% | |
| TATTGTTGGGTTACAAGAGC+AGG | + | chr2.3:54249555-54249574 | MS.gene58617:CDS | 40.0% | |
| TCCCTGTACTTATCATACAG+CGG | - | chr2.3:54244733-54244752 | None:intergenic | 40.0% | |
| TCGTGGATAGCTGAAAATAG+TGG | + | chr2.3:54245653-54245672 | MS.gene58617:intron | 40.0% | |
| TGGAAATGAAGAAACCACGA+AGG | - | chr2.3:54247769-54247788 | None:intergenic | 40.0% | |
| TGGATCAAAGGACACCATTA+CGG | - | chr2.3:54244877-54244896 | None:intergenic | 40.0% | |
| TGTACTTATCATACAGCGGT+TGG | - | chr2.3:54244729-54244748 | None:intergenic | 40.0% | |
| TGTCTTTGTCCAGTAACTTC+TGG | - | chr2.3:54249232-54249251 | None:intergenic | 40.0% | |
| TTATGTTGCGAGAACTTGTG+AGG | + | chr2.3:54247164-54247183 | MS.gene58617:CDS | 40.0% | |
| TTCCTCCGCTTAATGAAGTT+GGG | + | chr2.3:54247272-54247291 | MS.gene58617:CDS | 40.0% | |
| TTCGGTAACATGCTGCATAT+AGG | - | chr2.3:54248452-54248471 | None:intergenic | 40.0% | |
| TTGTCAAATAGCGGCTATAG+TGG | - | chr2.3:54245715-54245734 | None:intergenic | 40.0% | |
| ! | AGGATGGGATTTTATGCTGA+AGG | + | chr2.3:54244488-54244507 | MS.gene58617:CDS | 40.0% |
| ! | CCAACAATATCCCTTTTCTC+CGG | - | chr2.3:54249544-54249563 | None:intergenic | 40.0% |
| ! | CTCAAGGTATTATTCCTTCG+TGG | + | chr2.3:54247752-54247771 | MS.gene58617:intron | 40.0% |
| ! | GGATGGGATTTTATGCTGAA+GGG | + | chr2.3:54244489-54244508 | MS.gene58617:CDS | 40.0% |
| ! | GTGGGCTAACCATAAAATCA+TGG | + | chr2.3:54247189-54247208 | MS.gene58617:CDS | 40.0% |
| ! | GTTTCTCTGTTTCTTGCATG+TGG | + | chr2.3:54246114-54246133 | MS.gene58617:intron | 40.0% |
| ! | TGCTAGCTTGGCATAAGATT+TGG | - | chr2.3:54249339-54249358 | None:intergenic | 40.0% |
| !! | CAAAGGTATTTAGTGGGTGT+TGG | - | chr2.3:54245602-54245621 | None:intergenic | 40.0% |
| !! | CCAATCCCAAAGGTATTTAG+TGG | - | chr2.3:54245609-54245628 | None:intergenic | 40.0% |
| !! | CCACTAAATACCTTTGGGAT+TGG | + | chr2.3:54245606-54245625 | MS.gene58617:intron | 40.0% |
| !! | CTTAGGTTGAAGACTTGTCA+AGG | + | chr2.3:54248251-54248270 | MS.gene58617:intron | 40.0% |
| !! | CTTTATAGGGCTATTGGCTT+AGG | + | chr2.3:54245058-54245077 | MS.gene58617:intron | 40.0% |
| !! | GACATGATGGACAAACAATC+TGG | + | chr2.3:54248961-54248980 | MS.gene58617:intron | 40.0% |
| !! | GAGATCAGTTTTGTCAATCG+TGG | + | chr2.3:54245636-54245655 | MS.gene58617:intron | 40.0% |
| !! | GATTTATTTTTCTTGGGGGG+TGG | + | chr2.3:54246930-54246949 | MS.gene58617:intron | 40.0% |
| !! | GTTGTCCTTATTTCTGGTTG+AGG | + | chr2.3:54248541-54248560 | MS.gene58617:intron | 40.0% |
| !! | TGAGATTGGTCTCTTTCTTC+AGG | + | chr2.3:54249641-54249660 | MS.gene58617:intron | 40.0% |
| !! | TGTCCTTATTTCTGGTTGAG+GGG | + | chr2.3:54248543-54248562 | MS.gene58617:intron | 40.0% |
| AAATTGAAGCAGCTTGGACC+AGG | + | chr2.3:54245948-54245967 | MS.gene58617:intron | 45.0% | |
| AACAGTCGTTCACATATGCC+AGG | - | chr2.3:54249704-54249723 | None:intergenic | 45.0% | |
| AAGCCTCCTTAAGAGCCTAT+AGG | - | chr2.3:54249818-54249837 | None:intergenic | 45.0% | |
| ACAGAATTGGGAAGGAGAGT+CGG | - | chr2.3:54246569-54246588 | None:intergenic | 45.0% | |
| AGCGGTTGGGAATAGTCATT+TGG | - | chr2.3:54244715-54244734 | None:intergenic | 45.0% | |
| AGCTGAAAGATCGTAACTCG+AGG | - | chr2.3:54246422-54246441 | None:intergenic | 45.0% | |
| AGGTCGTACACGTTCCTTAT+CGG | + | chr2.3:54249381-54249400 | MS.gene58617:intron | 45.0% | |
| ATGCAGCATGTTACCGAAGA+AGG | + | chr2.3:54248454-54248473 | MS.gene58617:intron | 45.0% | |
| CACCAACGTTGTACCTTCTT+CGG | - | chr2.3:54248470-54248489 | None:intergenic | 45.0% | |
| CCGGAGAAAAGGGATATTGT+TGG | + | chr2.3:54249541-54249560 | MS.gene58617:CDS | 45.0% | |
| CGGGCGTGTGGAAAAATTAT+TGG | + | chr2.3:54245849-54245868 | MS.gene58617:intron | 45.0% | |
| CTATGGAAGACATGAGACAC+TGG | - | chr2.3:54245420-54245439 | None:intergenic | 45.0% | |
| CTTCCTCCGCTTAATGAAGT+TGG | + | chr2.3:54247271-54247290 | MS.gene58617:CDS | 45.0% | |
| GAAACAGGATCCAAGCCTTT+GGG | - | chr2.3:54248301-54248320 | None:intergenic | 45.0% | |
| GACTCGTTGTGCTCATCAAA+AGG | + | chr2.3:54249179-54249198 | MS.gene58617:intron | 45.0% | |
| GCAGCTATAGTAGCCGAATT+TGG | - | chr2.3:54245786-54245805 | None:intergenic | 45.0% | |
| GCCGTGGAACAATACAATAG+TGG | + | chr2.3:54245755-54245774 | MS.gene58617:intron | 45.0% | |
| GCTGTATGATAAGTACAGGG+AGG | + | chr2.3:54244732-54244751 | MS.gene58617:CDS | 45.0% | |
| GCTTGAAACGGGAGAAAGAT+AGG | + | chr2.3:54247841-54247860 | MS.gene58617:CDS | 45.0% | |
| GGTTGGGAATAGTCATTTGG+AGG | - | chr2.3:54244712-54244731 | None:intergenic | 45.0% | |
| GTCAGCCCAACTTCATTAAG+CGG | - | chr2.3:54247280-54247299 | None:intergenic | 45.0% | |
| TAGCGAGCCCAAGTTATTAG+AGG | + | chr2.3:54247887-54247906 | MS.gene58617:CDS | 45.0% | |
| TCAAACTCGTGTGGCTCAAA+TGG | - | chr2.3:54248880-54248899 | None:intergenic | 45.0% | |
| TCGAGTTACGATCTTTCAGC+TGG | + | chr2.3:54246421-54246440 | MS.gene58617:intron | 45.0% | |
| TCGTGCTTCTCTCTCAAAGA+AGG | - | chr2.3:54247139-54247158 | None:intergenic | 45.0% | |
| TGGAACATTCAACCTCCACA+TGG | + | chr2.3:54245266-54245285 | MS.gene58617:intron | 45.0% | |
| TTGGACAATACAGAAGGAGG+AGG | - | chr2.3:54249320-54249339 | None:intergenic | 45.0% | |
| TTGTACTAAATAGCGTGCCG+TGG | + | chr2.3:54245739-54245758 | MS.gene58617:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2.3:54244909-54244928 | None:intergenic | 45.0% |
| ! | AAGGAGAGTCGGAGACTTTT+GGG | - | chr2.3:54246558-54246577 | None:intergenic | 45.0% |
| ! | AGGTACAACGTTGGTGAAGT+TGG | + | chr2.3:54248474-54248493 | MS.gene58617:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2.3:54244910-54244929 | None:intergenic | 45.0% |
| ! | GGCTTCAATGCCGATTATTG+CGG | - | chr2.3:54248606-54248625 | None:intergenic | 45.0% |
| ! | TACCGAAGAAGGTACAACGT+TGG | + | chr2.3:54248465-54248484 | MS.gene58617:CDS | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | - | chr2.3:54244911-54244930 | None:intergenic | 45.0% |
| !! | AATACCTTTGGGATTGGACG+TGG | + | chr2.3:54245612-54245631 | MS.gene58617:intron | 45.0% |
| !! | GACTGGTCTGTGTGTCTTAA+AGG | + | chr2.3:54246811-54246830 | MS.gene58617:intron | 45.0% |
| !! | TAAGTACAGGGAGGCATTTG+AGG | + | chr2.3:54244741-54244760 | MS.gene58617:CDS | 45.0% |
| !! | TGCAGAAGTGTCTTTGAGCA+TGG | - | chr2.3:54247675-54247694 | None:intergenic | 45.0% |
| !!! | TGGGTTTTGTTTGAGCTCTG+AGG | + | chr2.3:54244626-54244645 | MS.gene58617:intron | 45.0% |
| !!! | TTTTGCAACAAGGGTGTTGC+TGG | + | chr2.3:54249846-54249865 | MS.gene58617:CDS | 45.0% |
| !! | TTGTAAAAAAAAAAAAATAT+CGG | + | chr2.3:54245829-54245848 | MS.gene58617:intron | 5.0% |
| AATACAGAAGGAGGAGGAGG+AGG | - | chr2.3:54249314-54249333 | None:intergenic | 50.0% | |
| AATGTCTGCAGCCGGAGAAA+AGG | + | chr2.3:54249530-54249549 | MS.gene58617:intron | 50.0% | |
| AGCCCAACTTCATTAAGCGG+AGG | - | chr2.3:54247277-54247296 | None:intergenic | 50.0% | |
| ATGTCTGCAGCCGGAGAAAA+GGG | + | chr2.3:54249531-54249550 | MS.gene58617:intron | 50.0% | |
| CACAACTCGCAACAGACAAG+TGG | - | chr2.3:54245559-54245578 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr2.3:54244905-54244924 | None:intergenic | 50.0% | |
| GAAGACATGAGACACTGGTC+TGG | - | chr2.3:54245415-54245434 | None:intergenic | 50.0% | |
| GACAATACAGAAGGAGGAGG+AGG | - | chr2.3:54249317-54249336 | None:intergenic | 50.0% | |
| GGAAACAGGATCCAAGCCTT+TGG | - | chr2.3:54248302-54248321 | None:intergenic | 50.0% | |
| GGAGATTGGAATGGGGCATA+TGG | + | chr2.3:54247622-54247641 | MS.gene58617:CDS | 50.0% | |
| GTAACTCGAGGATCATAGCG+TGG | - | chr2.3:54246410-54246429 | None:intergenic | 50.0% | |
| TAGTCCTCAGAGCTGAACTG+AGG | - | chr2.3:54244555-54244574 | None:intergenic | 50.0% | |
| TCAGAGCTGAACTGAGGTTC+AGG | - | chr2.3:54244549-54244568 | None:intergenic | 50.0% | |
| TGAACCTCAGTTCAGCTCTG+AGG | + | chr2.3:54244548-54244567 | MS.gene58617:CDS | 50.0% | |
| TGAGCTGCATGACAAGTACC+TGG | + | chr2.3:54249683-54249702 | MS.gene58617:CDS | 50.0% | |
| TGTTGCGAGAACTTGTGAGG+AGG | + | chr2.3:54247167-54247186 | MS.gene58617:CDS | 50.0% | |
| ! | ATTTTTCTTGGGGGGTGGAG+TGG | + | chr2.3:54246935-54246954 | MS.gene58617:intron | 50.0% |
| ! | GAAGGAGAGTCGGAGACTTT+TGG | - | chr2.3:54246559-54246578 | None:intergenic | 50.0% |
| ! | TGTGGTTAGTTGTGTGGCTG+CGG | - | chr2.3:54245343-54245362 | None:intergenic | 50.0% |
| !! | GAGTGGTAAGAGGTGTCATG+TGG | + | chr2.3:54246952-54246971 | MS.gene58617:intron | 50.0% |
| !! | GATCGTGAGTTGGTTTGCAC+GGG | + | chr2.3:54245872-54245891 | MS.gene58617:intron | 50.0% |
| !! | GCTGACTTGCTTTCGCGATT+TGG | + | chr2.3:54247294-54247313 | MS.gene58617:CDS | 50.0% |
| !! | GGATCGTGAGTTGGTTTGCA+CGG | + | chr2.3:54245871-54245890 | MS.gene58617:intron | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr2.3:54244897-54244916 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr2.3:54244896-54244915 | MS.gene58617:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr2.3:54244903-54244922 | MS.gene58617:intron | 55.0% | |
| CTCACCACGTCCAATCCCAA+AGG | - | chr2.3:54245619-54245638 | None:intergenic | 55.0% | |
| GCGAGAACTTGTGAGGAGGT+GGG | + | chr2.3:54247171-54247190 | MS.gene58617:CDS | 55.0% | |
| GGGTCGGCTACATGGATCAA+AGG | - | chr2.3:54244889-54244908 | None:intergenic | 55.0% | |
| GTGGCATTCATTACAGGCGG+AGG | + | chr2.3:54247815-54247834 | MS.gene58617:intron | 55.0% | |
| TGCGAGAACTTGTGAGGAGG+TGG | + | chr2.3:54247170-54247189 | MS.gene58617:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr2.3:54244897-54244916 | MS.gene58617:intron | 55.0% | |
| !! | AGGCGGAGGAGTGCTTGAAA+CGG | + | chr2.3:54247829-54247848 | MS.gene58617:intron | 55.0% |
| ACAGAAGGAGGAGGAGGAGG+CGG | - | chr2.3:54249311-54249330 | None:intergenic | 60.0% | |
| TGGGCTCGCTACTAGAGTGC+AGG | - | chr2.3:54247878-54247897 | None:intergenic | 60.0% | |
| TTGGGGGGTGGAGTGGTAAG+AGG | + | chr2.3:54246942-54246961 | MS.gene58617:intron | 60.0% | |
| !! | GGCGGAGGAGTGCTTGAAAC+GGG | + | chr2.3:54247830-54247849 | MS.gene58617:intron | 60.0% |
| TCGCAGTTGCTGCCGGAGGA+GGG | - | chr2.3:54246077-54246096 | None:intergenic | 65.0% | |
| AAGGAGGAGGAGGAGGCGGC+CGG | - | chr2.3:54249307-54249326 | None:intergenic | 70.0% | |
| AGCGTCGCAGTTGCTGCCGG+AGG | - | chr2.3:54246081-54246100 | None:intergenic | 70.0% | |
| CCACCTCTCACGCCCTCCTC+CGG | + | chr2.3:54246062-54246081 | MS.gene58617:intron | 70.0% | |
| GTCGCAGTTGCTGCCGGAGG+AGG | - | chr2.3:54246078-54246097 | None:intergenic | 70.0% | |
| !! | GGGAGCGTCGCAGTTGCTGC+CGG | - | chr2.3:54246084-54246103 | None:intergenic | 70.0% |
| !! | TCGCAGTCGCGCTGGCTGAG+AGG | - | chr2.3:54246040-54246059 | None:intergenic | 70.0% |
| AGGAGGAGGAGGAGGCGGCC+GGG | - | chr2.3:54249306-54249325 | None:intergenic | 75.0% | |
| AGGTGGCGTCGCAGTCGCGC+TGG | - | chr2.3:54246048-54246067 | None:intergenic | 75.0% | |
| AGTTATCCCCCCCCCCCCCC+CGG | + | chr2.3:54249285-54249304 | MS.gene58617:intron | 75.0% | |
| ! | CCGGAGGAGGGCGTGAGAGG+TGG | - | chr2.3:54246065-54246084 | None:intergenic | 75.0% |
| ! | CTGCCGGAGGAGGGCGTGAG+AGG | - | chr2.3:54246068-54246087 | None:intergenic | 75.0% |
| ! | AGGAGGAGGAGGCGGCCGGG+GGG | - | chr2.3:54249303-54249322 | None:intergenic | 80.0% |
| ! | GAGGAGGAGGAGGCGGCCGG+GGG | - | chr2.3:54249304-54249323 | None:intergenic | 80.0% |
| ! | GGAGGAGGAGGAGGCGGCCG+GGG | - | chr2.3:54249305-54249324 | None:intergenic | 80.0% |
| ! | AGGAGGAGGCGGCCGGGGGG+GGG | - | chr2.3:54249300-54249319 | None:intergenic | 85.0% |
| ! | GAGGAGGAGGCGGCCGGGGG+GGG | - | chr2.3:54249301-54249320 | None:intergenic | 85.0% |
| ! | GGAGGAGGAGGCGGCCGGGG+GGG | - | chr2.3:54249302-54249321 | None:intergenic | 85.0% |
| ! | AGGAGGCGGCCGGGGGGGGG+GGG | - | chr2.3:54249297-54249316 | None:intergenic | 90.0% |
| ! | GAGGAGGCGGCCGGGGGGGG+GGG | - | chr2.3:54249298-54249317 | None:intergenic | 90.0% |
| ! | GGAGGAGGCGGCCGGGGGGG+GGG | - | chr2.3:54249299-54249318 | None:intergenic | 90.0% |
| ! | AGGCGGCCGGGGGGGGGGGG+GGG | - | chr2.3:54249294-54249313 | None:intergenic | 95.0% |
| ! | GAGGCGGCCGGGGGGGGGGG+GGG | - | chr2.3:54249295-54249314 | None:intergenic | 95.0% |
| ! | GGAGGCGGCCGGGGGGGGGG+GGG | - | chr2.3:54249296-54249315 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 54244456 | 54249992 | 54244456 | ID=MS.gene58617 |
| chr2.3 | mRNA | 54244456 | 54249992 | 54244456 | ID=MS.gene58617.t1;Parent=MS.gene58617 |
| chr2.3 | exon | 54244456 | 54244589 | 54244456 | ID=MS.gene58617.t1.exon1;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54244456 | 54244589 | 54244456 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54244681 | 54244780 | 54244681 | ID=MS.gene58617.t1.exon2;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54244681 | 54244780 | 54244681 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54247130 | 54247315 | 54247130 | ID=MS.gene58617.t1.exon3;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54247130 | 54247315 | 54247130 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54247425 | 54247472 | 54247425 | ID=MS.gene58617.t1.exon4;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54247425 | 54247472 | 54247425 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54247554 | 54247757 | 54247554 | ID=MS.gene58617.t1.exon5;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54247554 | 54247757 | 54247554 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54247831 | 54247908 | 54247831 | ID=MS.gene58617.t1.exon6;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54247831 | 54247908 | 54247831 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54248079 | 54248168 | 54248079 | ID=MS.gene58617.t1.exon7;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54248079 | 54248168 | 54248079 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54248256 | 54248336 | 54248256 | ID=MS.gene58617.t1.exon8;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54248256 | 54248336 | 54248256 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54248460 | 54248522 | 54248460 | ID=MS.gene58617.t1.exon9;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54248460 | 54248522 | 54248460 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54249541 | 54249576 | 54249541 | ID=MS.gene58617.t1.exon10;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54249541 | 54249576 | 54249541 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54249663 | 54249749 | 54249663 | ID=MS.gene58617.t1.exon11;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54249663 | 54249749 | 54249663 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| chr2.3 | exon | 54249822 | 54249992 | 54249822 | ID=MS.gene58617.t1.exon12;Parent=MS.gene58617.t1 |
| chr2.3 | CDS | 54249822 | 54249992 | 54249822 | ID=cds.MS.gene58617.t1;Parent=MS.gene58617.t1 |
| Gene Sequence |
| Protein sequence |
