Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61163.t1 | XP_003604349.1 | 99.3 | 290 | 2 | 0 | 1 | 290 | 1 | 290 | 4.40E-162 | 580.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61163.t1 | Q9LVC8 | 73.8 | 290 | 74 | 2 | 1 | 290 | 1 | 288 | 2.7e-120 | 433.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61163.t1 | B7FL93 | 99.3 | 290 | 2 | 0 | 1 | 290 | 1 | 290 | 3.2e-162 | 580.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene61163 | 0.817838 | 2.68E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene61163 | 0.830484 | 2.86E-55 | -1.69E-46 |
| MS.gene049382 | MS.gene61163 | 0.81602 | 6.86E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene61163 | 0.800905 | 1.16E-48 | -1.69E-46 |
| MS.gene04984 | MS.gene61163 | 0.812685 | 3.74E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene61163 | 0.829281 | 5.62E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene61163 | 0.83499 | 2.18E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene61163 | 0.831625 | 1.50E-55 | -1.69E-46 |
| MS.gene050237 | MS.gene61163 | 0.801397 | 9.18E-49 | -1.69E-46 |
| MS.gene050438 | MS.gene61163 | 0.81932 | 1.24E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene61163 | 0.832065 | 1.17E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene61163 | -0.824836 | 6.51E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene61163 | 0.872709 | 2.58E-67 | -1.69E-46 |
| MS.gene050721 | MS.gene61163 | 0.876542 | 1.29E-68 | -1.69E-46 |
| MS.gene050724 | MS.gene61163 | 0.856863 | 2.41E-62 | -1.69E-46 |
| MS.gene050763 | MS.gene61163 | 0.800949 | 1.13E-48 | -1.69E-46 |
| MS.gene050780 | MS.gene61163 | 0.818108 | 2.33E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene61163 | 0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene050987 | MS.gene61163 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene051210 | MS.gene61163 | 0.807624 | 4.61E-50 | -1.69E-46 |
| MS.gene051243 | MS.gene61163 | 0.801614 | 8.29E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene61163 | 0.812581 | 3.94E-51 | -1.69E-46 |
| MS.gene051349 | MS.gene61163 | 0.818498 | 1.90E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene61163 | 0.830193 | 3.37E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene61163 | 0.809131 | 2.20E-50 | -1.69E-46 |
| MS.gene052286 | MS.gene61163 | 0.81639 | 5.67E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene61163 | 0.829191 | 5.91E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene61163 | 0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene61163 | 0.801544 | 8.57E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene61163 | 0.807516 | 4.87E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene61163 | 0.831655 | 1.48E-55 | -1.69E-46 |
| MS.gene052858 | MS.gene61163 | 0.816642 | 4.98E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene61163 | 0.822104 | 2.83E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene61163 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene61163 | 0.820769 | 5.76E-53 | -1.69E-46 |
| MS.gene053085 | MS.gene61163 | 0.834515 | 2.87E-56 | -1.69E-46 |
| MS.gene053216 | MS.gene61163 | 0.810496 | 1.12E-50 | -1.69E-46 |
| MS.gene053565 | MS.gene61163 | 0.817112 | 3.90E-52 | -1.69E-46 |
| MS.gene053630 | MS.gene61163 | 0.816865 | 4.44E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene61163 | 0.82437 | 8.38E-54 | -1.69E-46 |
| MS.gene054472 | MS.gene61163 | 0.826575 | 2.52E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene61163 | 0.822744 | 2.01E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene61163 | 0.824027 | 1.01E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene61163 | 0.802182 | 6.33E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene61163 | 0.835002 | 2.16E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene61163 | 0.811521 | 6.72E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene61163 | 0.812323 | 4.49E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene61163 | 0.822362 | 2.47E-53 | -1.69E-46 |
| MS.gene056875 | MS.gene61163 | 0.805132 | 1.55E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene61163 | 0.829172 | 5.97E-55 | -1.69E-46 |
| MS.gene057869 | MS.gene61163 | 0.837645 | 4.60E-57 | -1.69E-46 |
| MS.gene05795 | MS.gene61163 | 0.816783 | 4.63E-52 | -1.69E-46 |
| MS.gene058084 | MS.gene61163 | 0.802512 | 5.42E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene61163 | 0.809063 | 2.28E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene61163 | 0.805372 | 1.38E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene61163 | 0.843559 | 1.30E-58 | -1.69E-46 |
| MS.gene059124 | MS.gene61163 | 0.80681 | 6.86E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene61163 | 0.804785 | 1.83E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene61163 | 0.803402 | 3.55E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene61163 | 0.811967 | 5.37E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene61163 | 0.821947 | 3.08E-53 | -1.69E-46 |
| MS.gene060480 | MS.gene61163 | 0.822127 | 2.80E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene61163 | 0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene61163 | 0.807687 | 4.47E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene61163 | 0.808984 | 2.37E-50 | -1.69E-46 |
| MS.gene060842 | MS.gene61163 | 0.818558 | 1.84E-52 | -1.69E-46 |
| MS.gene060918 | MS.gene61163 | 0.817541 | 3.13E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene61163 | 0.841754 | 3.92E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61163 | MS.gene44339 | PPI |
| MS.gene61163 | MS.gene80725 | PPI |
| MS.gene61163 | MS.gene027672 | PPI |
| MS.gene61163 | MS.gene53448 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61163.t1 | MTR_4g009880 | 99.310 | 290 | 2 | 0 | 1 | 290 | 1 | 290 | 0.0 | 595 |
| MS.gene61163.t1 | MTR_5g033700 | 28.205 | 234 | 149 | 4 | 49 | 282 | 41 | 255 | 4.36e-22 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61163.t1 | AT5G57300 | 73.793 | 290 | 74 | 2 | 1 | 290 | 1 | 288 | 4.87e-159 | 444 |
| MS.gene61163.t1 | AT5G57300 | 73.793 | 290 | 74 | 2 | 1 | 290 | 1 | 288 | 4.87e-159 | 444 |
| MS.gene61163.t1 | AT5G57300 | 73.793 | 290 | 74 | 2 | 1 | 290 | 1 | 288 | 4.87e-159 | 444 |
| MS.gene61163.t1 | AT5G57300 | 73.793 | 290 | 74 | 2 | 1 | 290 | 1 | 288 | 4.87e-159 | 444 |
| MS.gene61163.t1 | AT1G23360 | 29.119 | 261 | 154 | 7 | 31 | 280 | 12 | 252 | 3.11e-22 | 93.6 |
Find 76 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATCAAATTCATGGCTT+TGG | 0.225191 | 4.2:+90246229 | None:intergenic |
| GGAGTGGTTGCCATTCATTC+AGG | 0.229705 | 4.2:+90249590 | MS.gene61163:CDS |
| GATTCTCATACTCTACTTTC+TGG | 0.257502 | 4.2:-90249559 | None:intergenic |
| CAGCATTATCTTCCACTTCC+AGG | 0.268263 | 4.2:+90246288 | MS.gene61163:CDS |
| CTTTGGGAATAGTCACTAAA+AGG | 0.297814 | 4.2:+90246246 | MS.gene61163:CDS |
| GATGGTTACACTATTGCATT+TGG | 0.299423 | 4.2:+90247866 | MS.gene61163:CDS |
| GAGAAGATGGTTCCCTTGTT+TGG | 0.306971 | 4.2:+90247798 | MS.gene61163:CDS |
| AAACAGCGGGCTGCCGAAAA+AGG | 0.316482 | 4.2:+90247659 | MS.gene61163:CDS |
| TTGCCAACATTCAACATGTT+TGG | 0.317102 | 4.2:-90247638 | None:intergenic |
| ACAATCAAATTCATGGCTTT+GGG | 0.326107 | 4.2:+90246230 | None:intergenic |
| TGCCAACATTCAACATGTTT+GGG | 0.340988 | 4.2:-90247637 | None:intergenic |
| ACTCACAGTTCTTTAAATAT+AGG | 0.345907 | 4.2:-90248102 | None:intergenic |
| CTTGATGTGGCTGGTGGCAC+AGG | 0.349838 | 4.2:+90246840 | MS.gene61163:CDS |
| CATTCTCACGCCACCAGTTT+CGG | 0.362182 | 4.2:+90246317 | MS.gene61163:CDS |
| GGAATAGTCACTAAAAGGTT+GGG | 0.368369 | 4.2:+90246251 | MS.gene61163:CDS |
| TGAATGTAACTAACCGAAAC+TGG | 0.369852 | 4.2:-90246330 | None:intergenic |
| ACACTATTGCATTTGGGATA+AGG | 0.370614 | 4.2:+90247873 | MS.gene61163:CDS |
| AGAAGATGGTTCCCTTGTTT+GGG | 0.370951 | 4.2:+90247799 | MS.gene61163:CDS |
| CGCATAGGAGAGATGGTTGC+TGG | 0.406834 | 4.2:+90248632 | MS.gene61163:CDS |
| GTAGAGTATGAGAATCTAGT+TGG | 0.412758 | 4.2:+90249566 | MS.gene61163:CDS |
| AGATGCTTCATTCCAGGAAA+AGG | 0.430797 | 4.2:-90246819 | None:intergenic |
| AGCACTCATTAAATCATTCA+TGG | 0.432256 | 4.2:-90246520 | None:intergenic |
| TTGATAGGTTATGGAGAAGA+TGG | 0.439292 | 4.2:+90247785 | MS.gene61163:intron |
| TAGAGTATGAGAATCTAGTT+GGG | 0.440717 | 4.2:+90249567 | MS.gene61163:CDS |
| AAGTTCTTAGTGAAGCTCAT+AGG | 0.441760 | 4.2:+90247915 | MS.gene61163:CDS |
| AACCATCCATTGAATCATCT+TGG | 0.445596 | 4.2:-90247850 | None:intergenic |
| ACATCAAGATGCTTCATTCC+AGG | 0.450303 | 4.2:-90246825 | None:intergenic |
| GGGAATAGTCACTAAAAGGT+TGG | 0.459998 | 4.2:+90246250 | MS.gene61163:CDS |
| ATGAATGATTTAATGAGTGC+TGG | 0.460373 | 4.2:+90246522 | MS.gene61163:CDS |
| GGTTCCCTTGTTTGGGTGGA+GGG | 0.465219 | 4.2:+90247806 | MS.gene61163:CDS |
| AGTACTTAGTTGAGAGTATC+CGG | 0.465510 | 4.2:+90248672 | MS.gene61163:CDS |
| GACTAACATGGCTTAGTTCA+AGG | 0.468673 | 4.2:-90248077 | None:intergenic |
| ATGGTTACACTATTGCATTT+GGG | 0.470063 | 4.2:+90247867 | MS.gene61163:CDS |
| ACTCTCAACTAAGTACTGAT+AGG | 0.475235 | 4.2:-90248666 | None:intergenic |
| TGCATAGACTGTGGAAAGAA+AGG | 0.477937 | 4.2:+90246547 | MS.gene61163:CDS |
| GCATCAATGATTGCTGATGC+AGG | 0.479407 | 4.2:+90249533 | MS.gene61163:CDS |
| AGATGGTTCCCTTGTTTGGG+TGG | 0.486517 | 4.2:+90247802 | MS.gene61163:CDS |
| GAGTTTCCAAGATGATTCAA+TGG | 0.492872 | 4.2:+90247844 | MS.gene61163:CDS |
| ACATGTAAACGAAGAAGAAA+AGG | 0.495399 | 4.2:+90246449 | MS.gene61163:CDS |
| TTCCAAGATGATTCAATGGA+TGG | 0.499743 | 4.2:+90247848 | MS.gene61163:CDS |
| TGGTTCCCTTGTTTGGGTGG+AGG | 0.501182 | 4.2:+90247805 | MS.gene61163:CDS |
| GAGTGGTTGCCATTCATTCA+GGG | 0.501280 | 4.2:+90249591 | MS.gene61163:CDS |
| AACCCAAACATGTTGAATGT+TGG | 0.507027 | 4.2:+90247635 | MS.gene61163:CDS |
| GAAGAAAAGGCACGCATGGT+TGG | 0.513960 | 4.2:+90246462 | MS.gene61163:CDS |
| GGCGTGAGAATGTAGAAGCC+TGG | 0.539666 | 4.2:-90246306 | None:intergenic |
| AGAATGTAGAAGCCTGGAAG+TGG | 0.541500 | 4.2:-90246300 | None:intergenic |
| CATTTCCCTCCACCCAAACA+AGG | 0.541525 | 4.2:-90247811 | None:intergenic |
| CGAAGAAGAAAAGGCACGCA+TGG | 0.547778 | 4.2:+90246458 | MS.gene61163:CDS |
| GGGTATTGAAACATGGCGGC+AGG | 0.551535 | 4.2:+90248046 | MS.gene61163:intron |
| TTCTCAGTTATTCCACGCAT+AGG | 0.551549 | 4.2:+90248617 | MS.gene61163:CDS |
| CATCAATGATTGCTGATGCA+GGG | 0.553506 | 4.2:+90249534 | MS.gene61163:CDS |
| TAAACAGAGTTAAGCAGAGA+GGG | 0.553594 | 4.2:+90247552 | MS.gene61163:CDS |
| ATGAAGCATCTTGATGTGGC+TGG | 0.567195 | 4.2:+90246831 | MS.gene61163:CDS |
| GAATAGTCACTAAAAGGTTG+GGG | 0.571220 | 4.2:+90246252 | MS.gene61163:CDS |
| AGAGTATGAGAATCTAGTTG+GGG | 0.577545 | 4.2:+90249568 | MS.gene61163:CDS |
| TATTCCACGCATAGGAGAGA+TGG | 0.581177 | 4.2:+90248625 | MS.gene61163:CDS |
| CATGGCTTAGTTCAAGGCAT+AGG | 0.588289 | 4.2:-90248071 | None:intergenic |
| AAGCAGAGAGGGCTTCAAGA+CGG | 0.589957 | 4.2:+90247563 | MS.gene61163:CDS |
| CTGGAAGTGGAAGATAATGC+TGG | 0.589974 | 4.2:-90246287 | None:intergenic |
| GTTGAATGTTGGCAAACAGC+GGG | 0.591584 | 4.2:+90247646 | MS.gene61163:CDS |
| TTTAACAGGGTATTGAAACA+TGG | 0.607121 | 4.2:+90248039 | MS.gene61163:intron |
| TGAATGATTTAATGAGTGCT+GGG | 0.607327 | 4.2:+90246523 | MS.gene61163:CDS |
| TAAATATAGGAAGACTAACA+TGG | 0.618541 | 4.2:-90248089 | None:intergenic |
| TGGAATGAAGCATCTTGATG+TGG | 0.622526 | 4.2:+90246827 | MS.gene61163:CDS |
| GCAACCATCTCTCCTATGCG+TGG | 0.623759 | 4.2:-90248629 | None:intergenic |
| ATAAACAGAGTTAAGCAGAG+AGG | 0.627426 | 4.2:+90247551 | MS.gene61163:CDS |
| AAGGAATTGATAACCTGTGG+GGG | 0.636836 | 4.2:-90248701 | None:intergenic |
| GAGTATGAGAATCTAGTTGG+GGG | 0.647356 | 4.2:+90249569 | MS.gene61163:CDS |
| TCCAGGAAAAGGATTCAACA+TGG | 0.651935 | 4.2:-90246808 | None:intergenic |
| TGTTGAATGTTGGCAAACAG+CGG | 0.653881 | 4.2:+90247645 | MS.gene61163:CDS |
| GAAGGAATTGATAACCTGTG+GGG | 0.670066 | 4.2:-90248702 | None:intergenic |
| ATTTCCCTCCACCCAAACAA+GGG | 0.670211 | 4.2:-90247810 | None:intergenic |
| AAGCATCTTGATGTGGCTGG+TGG | 0.685724 | 4.2:+90246834 | MS.gene61163:CDS |
| AACAGGGTATTGAAACATGG+CGG | 0.708414 | 4.2:+90248042 | MS.gene61163:intron |
| ATGTAACTAACCGAAACTGG+TGG | 0.730211 | 4.2:-90246327 | None:intergenic |
| GTGCTGGGTTGCATAGACTG+TGG | 0.765413 | 4.2:+90246538 | MS.gene61163:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+AGG | - | chr4.2:90249298-90249317 | None:intergenic | 0.0% |
| !! | AATTAAATAATGAATAACAT+AGG | - | chr4.2:90248928-90248947 | None:intergenic | 10.0% |
| !! | GTAATAATTTAAAAAAGAAA+TGG | - | chr4.2:90246697-90246716 | None:intergenic | 10.0% |
| !!! | ATTTGTTTTAACAAAAAAAA+TGG | - | chr4.2:90246361-90246380 | None:intergenic | 10.0% |
| !! | AATTATTTATAGAATGGAAT+AGG | - | chr4.2:90246581-90246600 | None:intergenic | 15.0% |
| !! | TACAAGGTATATAAATTAAA+GGG | - | chr4.2:90248254-90248273 | None:intergenic | 15.0% |
| !! | TATAATCATTAATAAGCATA+AGG | + | chr4.2:90247479-90247498 | MS.gene61163:intron | 15.0% |
| !! | TTAATTTATCTTCATTTGTT+AGG | + | chr4.2:90247740-90247759 | MS.gene61163:intron | 15.0% |
| !! | TTACAAGGTATATAAATTAA+AGG | - | chr4.2:90248255-90248274 | None:intergenic | 15.0% |
| !! | TTAGAAACTATAAAGTTTAA+AGG | - | chr4.2:90246885-90246904 | None:intergenic | 15.0% |
| !!! | ACATTTTTCCATAAAAAATT+AGG | + | chr4.2:90246420-90246439 | MS.gene61163:intron | 15.0% |
| !!! | ATTTTTTATTGATTTTACAG+GGG | + | chr4.2:90247502-90247521 | MS.gene61163:intron | 15.0% |
| !!! | GATTTTTTATTGATTTTACA+GGG | + | chr4.2:90247501-90247520 | MS.gene61163:intron | 15.0% |
| !!! | TTTTTTTCATTTCTTTAACA+GGG | + | chr4.2:90248026-90248045 | MS.gene61163:intron | 15.0% |
| !! | AAACAAATAATATTAACCTG+TGG | + | chr4.2:90246373-90246392 | MS.gene61163:intron | 20.0% |
| !! | AAACATAATCGAAGTTTATA+TGG | + | chr4.2:90248278-90248297 | MS.gene61163:intron | 20.0% |
| !! | AGTTATATTCTATTCAAGTA+TGG | - | chr4.2:90248554-90248573 | None:intergenic | 20.0% |
| !! | CATGAGATATCAATAAATAA+GGG | + | chr4.2:90246988-90247007 | MS.gene61163:intron | 20.0% |
| !! | TGACTAATGTATTATATTGA+TGG | + | chr4.2:90249494-90249513 | MS.gene61163:intron | 20.0% |
| !!! | ATATAAAATGTTACTTTGAG+TGG | + | chr4.2:90246908-90246927 | MS.gene61163:intron | 20.0% |
| !!! | GGATTTTTTATTGATTTTAC+AGG | + | chr4.2:90247500-90247519 | MS.gene61163:intron | 20.0% |
| !!! | GTTTGAAACCTAATTTTTTA+TGG | - | chr4.2:90246431-90246450 | None:intergenic | 20.0% |
| !!! | GTTTTTATGCTTATTTTGAT+AGG | + | chr4.2:90247770-90247789 | MS.gene61163:intron | 20.0% |
| !!! | GTTTTTTTCATTTCTTTAAC+AGG | + | chr4.2:90248025-90248044 | MS.gene61163:intron | 20.0% |
| !!! | TCGATTATGTTTTATTTACA+AGG | - | chr4.2:90248270-90248289 | None:intergenic | 20.0% |
| ! | ACATTAGTCAATACAGAAAA+GGG | - | chr4.2:90249484-90249503 | None:intergenic | 25.0% |
| ! | ACCTTATATAAACAGAAACT+TGG | - | chr4.2:90247120-90247139 | None:intergenic | 25.0% |
| ! | ACTAAAGCATATAAAGATGT+TGG | - | chr4.2:90248851-90248870 | None:intergenic | 25.0% |
| ! | ACTCACAGTTCTTTAAATAT+AGG | - | chr4.2:90248105-90248124 | None:intergenic | 25.0% |
| ! | ATAAAAGAAGTGATGAAGTA+TGG | + | chr4.2:90247199-90247218 | MS.gene61163:intron | 25.0% |
| ! | ATAATGAATAACATAGGAGA+TGG | - | chr4.2:90248922-90248941 | None:intergenic | 25.0% |
| ! | GCATGAGATATCAATAAATA+AGG | + | chr4.2:90246987-90247006 | MS.gene61163:intron | 25.0% |
| ! | TAAATATAGGAAGACTAACA+TGG | - | chr4.2:90248092-90248111 | None:intergenic | 25.0% |
| ! | TACATTAGTCAATACAGAAA+AGG | - | chr4.2:90249485-90249504 | None:intergenic | 25.0% |
| ! | TCTCCATATTAATGCAATAT+TGG | - | chr4.2:90247421-90247440 | None:intergenic | 25.0% |
| ! | TTTGAAAATTGAGGAATTCT+CGG | + | chr4.2:90248473-90248492 | MS.gene61163:intron | 25.0% |
| !! | ACATTCTCATTTACCTTTTT+CGG | - | chr4.2:90247675-90247694 | None:intergenic | 25.0% |
| !! | AGATCAGATATACTCATTTT+GGG | + | chr4.2:90249084-90249103 | MS.gene61163:intron | 25.0% |
| !! | GGATATATCTTTGAAAATTG+AGG | + | chr4.2:90248464-90248483 | MS.gene61163:intron | 25.0% |
| !! | TACGTTCATACTTCAAATTT+TGG | + | chr4.2:90248321-90248340 | MS.gene61163:intron | 25.0% |
| !! | TTTTGGACAAAAGAATTAAG+AGG | + | chr4.2:90248338-90248357 | MS.gene61163:intron | 25.0% |
| !!! | ACTGTGTAGTTTTTTTATGT+TGG | + | chr4.2:90249369-90249388 | MS.gene61163:intron | 25.0% |
| !!! | ATGCTTATTTTGATAGGTTA+TGG | + | chr4.2:90247776-90247795 | MS.gene61163:intron | 25.0% |
| !!! | CATTTTAGCTTGAAAGAAAA+GGG | + | chr4.2:90248752-90248771 | MS.gene61163:intron | 25.0% |
| !!! | TCATTTTAGCTTGAAAGAAA+AGG | + | chr4.2:90248751-90248770 | MS.gene61163:intron | 25.0% |
| AAACAACAGATAATGTGTCT+CGG | + | chr4.2:90248362-90248381 | MS.gene61163:intron | 30.0% | |
| AAGTTTAAAGGTGAGTATGA+AGG | - | chr4.2:90246873-90246892 | None:intergenic | 30.0% | |
| AATCCTATACAGAACTAACA+CGG | - | chr4.2:90246745-90246764 | None:intergenic | 30.0% | |
| ACATGTAAACGAAGAAGAAA+AGG | + | chr4.2:90246449-90246468 | MS.gene61163:CDS | 30.0% | |
| AGCACTCATTAAATCATTCA+TGG | - | chr4.2:90246523-90246542 | None:intergenic | 30.0% | |
| ATGAATGATTTAATGAGTGC+TGG | + | chr4.2:90246522-90246541 | MS.gene61163:CDS | 30.0% | |
| ATGGTTACACTATTGCATTT+GGG | + | chr4.2:90247867-90247886 | MS.gene61163:CDS | 30.0% | |
| ATTAATATGGAGAGACTTGA+AGG | + | chr4.2:90247428-90247447 | MS.gene61163:intron | 30.0% | |
| CGACATTAATGCGTAAAAAT+CGG | - | chr4.2:90246719-90246738 | None:intergenic | 30.0% | |
| CTTGAAAAATATGTAGTGTG+TGG | + | chr4.2:90247176-90247195 | MS.gene61163:intron | 30.0% | |
| GAACATGTAAAAACTAGTCA+CGG | + | chr4.2:90249148-90249167 | MS.gene61163:intron | 30.0% | |
| GCCAAGTTTCTGTTTATATA+AGG | + | chr4.2:90247116-90247135 | MS.gene61163:intron | 30.0% | |
| TAAGTACAGCTATCAATAGA+AGG | - | chr4.2:90248723-90248742 | None:intergenic | 30.0% | |
| TAATTGAAACCCAAGAAAAG+AGG | + | chr4.2:90248943-90248962 | MS.gene61163:intron | 30.0% | |
| TAATTTCTGCTCAATTTCTC+AGG | + | chr4.2:90246778-90246797 | MS.gene61163:intron | 30.0% | |
| TAGAGTATGAGAATCTAGTT+GGG | + | chr4.2:90249567-90249586 | MS.gene61163:CDS | 30.0% | |
| TCGCCAATATTGCATTAATA+TGG | + | chr4.2:90247415-90247434 | MS.gene61163:intron | 30.0% | |
| TGAATGATTTAATGAGTGCT+GGG | + | chr4.2:90246523-90246542 | MS.gene61163:CDS | 30.0% | |
| TGTAATTGACACGATAAAGT+GGG | - | chr4.2:90249110-90249129 | None:intergenic | 30.0% | |
| TGTAGTAGCAGTTAGATAAA+AGG | + | chr4.2:90246946-90246965 | MS.gene61163:intron | 30.0% | |
| TTAATATGGAGAGACTTGAA+GGG | + | chr4.2:90247429-90247448 | MS.gene61163:intron | 30.0% | |
| TTCTATTCAAGTATGGAAGA+AGG | - | chr4.2:90248547-90248566 | None:intergenic | 30.0% | |
| TTCTCAAGAATGATGTGAAT+TGG | + | chr4.2:90248140-90248159 | MS.gene61163:intron | 30.0% | |
| TTGAAGTATGAACGTAAACA+AGG | - | chr4.2:90248317-90248336 | None:intergenic | 30.0% | |
| TTGTAATTGACACGATAAAG+TGG | - | chr4.2:90249111-90249130 | None:intergenic | 30.0% | |
| ! | ATACAAAAGCCTCTTTTCTT+GGG | - | chr4.2:90248955-90248974 | None:intergenic | 30.0% |
| ! | GAGATCAGATATACTCATTT+TGG | + | chr4.2:90249083-90249102 | MS.gene61163:intron | 30.0% |
| ! | GATTTTTATCCCTGAATGAA+TGG | - | chr4.2:90249603-90249622 | None:intergenic | 30.0% |
| ! | TATACAAAAGCCTCTTTTCT+TGG | - | chr4.2:90248956-90248975 | None:intergenic | 30.0% |
| !! | GTATTATATTGATGGATTGC+AGG | + | chr4.2:90249502-90249521 | MS.gene61163:intron | 30.0% |
| !! | TTTAACAGGGTATTGAAACA+TGG | + | chr4.2:90248039-90248058 | MS.gene61163:intron | 30.0% |
| AACAACAGATAATGTGTCTC+GGG | + | chr4.2:90248363-90248382 | MS.gene61163:intron | 35.0% | |
| AACCATCCATTGAATCATCT+TGG | - | chr4.2:90247853-90247872 | None:intergenic | 35.0% | |
| AACCCAAACATGTTGAATGT+TGG | + | chr4.2:90247635-90247654 | MS.gene61163:CDS | 35.0% | |
| AAGTTCTTAGTGAAGCTCAT+AGG | + | chr4.2:90247915-90247934 | MS.gene61163:CDS | 35.0% | |
| AGAGTATGAGAATCTAGTTG+GGG | + | chr4.2:90249568-90249587 | MS.gene61163:CDS | 35.0% | |
| ATAAACAGAGTTAAGCAGAG+AGG | + | chr4.2:90247551-90247570 | MS.gene61163:CDS | 35.0% | |
| ATACAGCTATACCCTATGAA+AGG | - | chr4.2:90247366-90247385 | None:intergenic | 35.0% | |
| ATGCTGTAAAATTCTCACCA+TGG | + | chr4.2:90247258-90247277 | MS.gene61163:intron | 35.0% | |
| CATCTTGTAGAAGGATCTAT+AGG | - | chr4.2:90248805-90248824 | None:intergenic | 35.0% | |
| GAATAGTCACTAAAAGGTTG+GGG | + | chr4.2:90246252-90246271 | MS.gene61163:CDS | 35.0% | |
| GAGTTTCCAAGATGATTCAA+TGG | + | chr4.2:90247844-90247863 | MS.gene61163:CDS | 35.0% | |
| GATGGTCATTATCAACCAAT+TGG | - | chr4.2:90248904-90248923 | None:intergenic | 35.0% | |
| GATGGTTACACTATTGCATT+TGG | + | chr4.2:90247866-90247885 | MS.gene61163:CDS | 35.0% | |
| GATTCTCATACTCTACTTTC+TGG | - | chr4.2:90249562-90249581 | None:intergenic | 35.0% | |
| GGAATAGTCACTAAAAGGTT+GGG | + | chr4.2:90246251-90246270 | MS.gene61163:CDS | 35.0% | |
| GTAGAGTATGAGAATCTAGT+TGG | + | chr4.2:90249566-90249585 | MS.gene61163:CDS | 35.0% | |
| TAAACAGAGTTAAGCAGAGA+GGG | + | chr4.2:90247552-90247571 | MS.gene61163:CDS | 35.0% | |
| TACAGCTATACCCTATGAAA+GGG | - | chr4.2:90247365-90247384 | None:intergenic | 35.0% | |
| TCAGAGGGATATAGTTCAAA+AGG | + | chr4.2:90247227-90247246 | MS.gene61163:intron | 35.0% | |
| TGAATGTAACTAACCGAAAC+TGG | - | chr4.2:90246333-90246352 | None:intergenic | 35.0% | |
| TGCCAACATTCAACATGTTT+GGG | - | chr4.2:90247640-90247659 | None:intergenic | 35.0% | |
| TGCTACAGATAATGTGAGAT+TGG | + | chr4.2:90247088-90247107 | MS.gene61163:intron | 35.0% | |
| TGCTGTAAAATTCTCACCAT+GGG | + | chr4.2:90247259-90247278 | MS.gene61163:intron | 35.0% | |
| TTCCAAGATGATTCAATGGA+TGG | + | chr4.2:90247848-90247867 | MS.gene61163:CDS | 35.0% | |
| TTGATAGGTTATGGAGAAGA+TGG | + | chr4.2:90247785-90247804 | MS.gene61163:intron | 35.0% | |
| TTGCCAACATTCAACATGTT+TGG | - | chr4.2:90247641-90247660 | None:intergenic | 35.0% | |
| TTGGCAATGTCGATATTGTT+AGG | + | chr4.2:90249190-90249209 | MS.gene61163:intron | 35.0% | |
| ! | ACACTATTGCATTTGGGATA+AGG | + | chr4.2:90247873-90247892 | MS.gene61163:CDS | 35.0% |
| ! | AGAAGGAATTGATAACCTGT+GGG | - | chr4.2:90248706-90248725 | None:intergenic | 35.0% |
| ! | CTTTGGGAATAGTCACTAAA+AGG | + | chr4.2:90246246-90246265 | MS.gene61163:CDS | 35.0% |
| ! | GAATGATGTGAATTGGTGTT+TGG | + | chr4.2:90248147-90248166 | MS.gene61163:intron | 35.0% |
| ! | GTTCACGAGTTAATTTGGTT+TGG | - | chr4.2:90248499-90248518 | None:intergenic | 35.0% |
| ! | TAGAAGGAATTGATAACCTG+TGG | - | chr4.2:90248707-90248726 | None:intergenic | 35.0% |
| !! | ACTCTCAACTAAGTACTGAT+AGG | - | chr4.2:90248669-90248688 | None:intergenic | 35.0% |
| !! | AGTACTTAGTTGAGAGTATC+CGG | + | chr4.2:90248672-90248691 | MS.gene61163:CDS | 35.0% |
| !! | TTGCTTATCGCTTGTTTCTA+AGG | - | chr4.2:90248420-90248439 | None:intergenic | 35.0% |
| !!! | GGATGTTGCTTTTAGAATCT+TGG | + | chr4.2:90247523-90247542 | MS.gene61163:CDS | 35.0% |
| AAATGTCAAGAAAGCCGTGA+CGG | + | chr4.2:90249454-90249473 | MS.gene61163:intron | 40.0% | |
| AAGGATCTATAGGTCTGTTC+AGG | - | chr4.2:90248795-90248814 | None:intergenic | 40.0% | |
| AAGTGGTTCCAACCTTTCAT+TGG | - | chr4.2:90247290-90247309 | None:intergenic | 40.0% | |
| ACAACAGATAATGTGTCTCG+GGG | + | chr4.2:90248364-90248383 | MS.gene61163:intron | 40.0% | |
| ACAGTTATGTGAGTTTCAGG+TGG | + | chr4.2:90249249-90249268 | MS.gene61163:intron | 40.0% | |
| ACATCAAGATGCTTCATTCC+AGG | - | chr4.2:90246828-90246847 | None:intergenic | 40.0% | |
| ACGTGGTTCACGAGTTAATT+TGG | - | chr4.2:90248504-90248523 | None:intergenic | 40.0% | |
| AGAAGTGATGAAGTATGGAC+TGG | + | chr4.2:90247204-90247223 | MS.gene61163:intron | 40.0% | |
| AGATCCTTCTACAAGATGTC+CGG | + | chr4.2:90248807-90248826 | MS.gene61163:intron | 40.0% | |
| AGATGCTTCATTCCAGGAAA+AGG | - | chr4.2:90246822-90246841 | None:intergenic | 40.0% | |
| AGATTTGTCCTATGTTGCAC+CGG | + | chr4.2:90246625-90246644 | MS.gene61163:intron | 40.0% | |
| AGTCATACAGTCCCTTTCAT+AGG | + | chr4.2:90247351-90247370 | MS.gene61163:intron | 40.0% | |
| ATGAAAGGGACTGTATGACT+AGG | - | chr4.2:90247351-90247370 | None:intergenic | 40.0% | |
| ATGTAACTAACCGAAACTGG+TGG | - | chr4.2:90246330-90246349 | None:intergenic | 40.0% | |
| ATTACTTCGAGCTTTCGTGA+AGG | + | chr4.2:90247709-90247728 | MS.gene61163:intron | 40.0% | |
| CAATGTCGATATTGTTAGGC+TGG | + | chr4.2:90249194-90249213 | MS.gene61163:intron | 40.0% | |
| CATCAATGATTGCTGATGCA+GGG | + | chr4.2:90249534-90249553 | MS.gene61163:CDS | 40.0% | |
| CTCACAGTTATGTGAGTTTC+AGG | + | chr4.2:90249246-90249265 | MS.gene61163:intron | 40.0% | |
| CTGAAACTCACATAACTGTG+AGG | - | chr4.2:90249248-90249267 | None:intergenic | 40.0% | |
| CTTGAAAGAAAAGGGTAGTC+AGG | + | chr4.2:90248760-90248779 | MS.gene61163:intron | 40.0% | |
| GACTAACATGGCTTAGTTCA+AGG | - | chr4.2:90248080-90248099 | None:intergenic | 40.0% | |
| GAGTATGAGAATCTAGTTGG+GGG | + | chr4.2:90249569-90249588 | MS.gene61163:CDS | 40.0% | |
| GCTGTAAAATTCTCACCATG+GGG | + | chr4.2:90247260-90247279 | MS.gene61163:intron | 40.0% | |
| GGAAGAAGGCTATGATTCTA+TGG | - | chr4.2:90248533-90248552 | None:intergenic | 40.0% | |
| GGGAATAGTCACTAAAAGGT+TGG | + | chr4.2:90246250-90246269 | MS.gene61163:CDS | 40.0% | |
| GTCATACAGTCCCTTTCATA+GGG | + | chr4.2:90247352-90247371 | MS.gene61163:intron | 40.0% | |
| GTCATGTTTGTATCCTACAC+CGG | - | chr4.2:90246647-90246666 | None:intergenic | 40.0% | |
| TCAATTTCACAATGCTCCAC+AGG | - | chr4.2:90246392-90246411 | None:intergenic | 40.0% | |
| TCCAGGAAAAGGATTCAACA+TGG | - | chr4.2:90246811-90246830 | None:intergenic | 40.0% | |
| TCGACATTGCCAATTAAGCT+AGG | - | chr4.2:90249183-90249202 | None:intergenic | 40.0% | |
| TCTATAGGTCTGTTCAGGAA+TGG | - | chr4.2:90248790-90248809 | None:intergenic | 40.0% | |
| TCTGATCTCAACATTGTCTG+CGG | - | chr4.2:90249072-90249091 | None:intergenic | 40.0% | |
| TCTTAGTGAAGCTCATAGGT+TGG | + | chr4.2:90247919-90247938 | MS.gene61163:intron | 40.0% | |
| TGATTCTATGGCACTTTACG+TGG | - | chr4.2:90248521-90248540 | None:intergenic | 40.0% | |
| TGCATAGACTGTGGAAAGAA+AGG | + | chr4.2:90246547-90246566 | MS.gene61163:CDS | 40.0% | |
| TGTTACTCTTCTTCTCTTGC+AGG | + | chr4.2:90248579-90248598 | MS.gene61163:intron | 40.0% | |
| TGTTGAATGTTGGCAAACAG+CGG | + | chr4.2:90247645-90247664 | MS.gene61163:CDS | 40.0% | |
| TTCTCAGTTATTCCACGCAT+AGG | + | chr4.2:90248617-90248636 | MS.gene61163:CDS | 40.0% | |
| ! | AAAGCGCTAGAGAATTGTGT+GGG | + | chr4.2:90248438-90248457 | MS.gene61163:intron | 40.0% |
| ! | AAGGAATTGATAACCTGTGG+GGG | - | chr4.2:90248704-90248723 | None:intergenic | 40.0% |
| ! | AGAAGATGGTTCCCTTGTTT+GGG | + | chr4.2:90247799-90247818 | MS.gene61163:CDS | 40.0% |
| ! | GAAGGAATTGATAACCTGTG+GGG | - | chr4.2:90248705-90248724 | None:intergenic | 40.0% |
| ! | GTGAATAAAAGCGTAGAGTG+AGG | + | chr4.2:90248869-90248888 | MS.gene61163:intron | 40.0% |
| ! | TCCATGTTGAATCCTTTTCC+TGG | + | chr4.2:90246807-90246826 | MS.gene61163:CDS | 40.0% |
| ! | TGGAATGAAGCATCTTGATG+TGG | + | chr4.2:90246827-90246846 | MS.gene61163:CDS | 40.0% |
| !! | AACAGGGTATTGAAACATGG+CGG | + | chr4.2:90248042-90248061 | MS.gene61163:intron | 40.0% |
| !! | CGGTTTTATCGATGTTCTAG+AGG | + | chr4.2:90247583-90247602 | MS.gene61163:CDS | 40.0% |
| !! | TGTCCGTGTTAGTTCTGTAT+AGG | + | chr4.2:90246739-90246758 | MS.gene61163:intron | 40.0% |
| AAAACTAGTCACGGTCCGTA+AGG | + | chr4.2:90249157-90249176 | MS.gene61163:intron | 45.0% | |
| AAAGCGTAGAGTGAGGAAGA+TGG | + | chr4.2:90248876-90248895 | MS.gene61163:intron | 45.0% | |
| AAAGGTTGGAACCACTTGTG+AGG | + | chr4.2:90247293-90247312 | MS.gene61163:intron | 45.0% | |
| AAGCGTAGAGTGAGGAAGAT+GGG | + | chr4.2:90248877-90248896 | MS.gene61163:intron | 45.0% | |
| AAGGTTGGAACCACTTGTGA+GGG | + | chr4.2:90247294-90247313 | MS.gene61163:intron | 45.0% | |
| AATGTCAAGAAAGCCGTGAC+GGG | + | chr4.2:90249455-90249474 | MS.gene61163:intron | 45.0% | |
| ACAGCTGAATGTGGAAGACT+GGG | - | chr4.2:90248996-90249015 | None:intergenic | 45.0% | |
| AGAATGTAGAAGCCTGGAAG+TGG | - | chr4.2:90246303-90246322 | None:intergenic | 45.0% | |
| ATTTCCCTCCACCCAAACAA+GGG | - | chr4.2:90247813-90247832 | None:intergenic | 45.0% | |
| CAACAGATAATGTGTCTCGG+GGG | + | chr4.2:90248365-90248384 | MS.gene61163:intron | 45.0% | |
| CACATTCAGCTGTAAGAGGA+AGG | + | chr4.2:90249003-90249022 | MS.gene61163:intron | 45.0% | |
| CACGGCTTTCTTGACATTTG+AGG | - | chr4.2:90249453-90249472 | None:intergenic | 45.0% | |
| CAGCATTATCTTCCACTTCC+AGG | + | chr4.2:90246288-90246307 | MS.gene61163:CDS | 45.0% | |
| CATGGCTTAGTTCAAGGCAT+AGG | - | chr4.2:90248074-90248093 | None:intergenic | 45.0% | |
| CTGGAAGTGGAAGATAATGC+TGG | - | chr4.2:90246290-90246309 | None:intergenic | 45.0% | |
| CTTCCACATTCAGCTGTAAG+AGG | + | chr4.2:90248999-90249018 | MS.gene61163:intron | 45.0% | |
| CTTCCTCTTACAGCTGAATG+TGG | - | chr4.2:90249005-90249024 | None:intergenic | 45.0% | |
| GAGAAGATGGTTCCCTTGTT+TGG | + | chr4.2:90247798-90247817 | MS.gene61163:CDS | 45.0% | |
| GAGTGGTTGCCATTCATTCA+GGG | + | chr4.2:90249591-90249610 | MS.gene61163:CDS | 45.0% | |
| GCAGTGAACTGAACTGTATC+CGG | - | chr4.2:90248829-90248848 | None:intergenic | 45.0% | |
| GCATCAATGATTGCTGATGC+AGG | + | chr4.2:90249533-90249552 | MS.gene61163:CDS | 45.0% | |
| GCCAATTAAGCTAGGCCTTA+CGG | - | chr4.2:90249175-90249194 | None:intergenic | 45.0% | |
| GCTAGAGAATTGTGTGGGAA+AGG | + | chr4.2:90248443-90248462 | MS.gene61163:intron | 45.0% | |
| GTAAAATTCTCACCATGGGG+AGG | + | chr4.2:90247263-90247282 | MS.gene61163:intron | 45.0% | |
| GTATCCGGACATCTTGTAGA+AGG | - | chr4.2:90248814-90248833 | None:intergenic | 45.0% | |
| GTTGAATGTTGGCAAACAGC+GGG | + | chr4.2:90247646-90247665 | MS.gene61163:CDS | 45.0% | |
| TACAGCTGAATGTGGAAGAC+TGG | - | chr4.2:90248997-90249016 | None:intergenic | 45.0% | |
| TATTCCACGCATAGGAGAGA+TGG | + | chr4.2:90248625-90248644 | MS.gene61163:CDS | 45.0% | |
| TCCGTAAGGCCTAGCTTAAT+TGG | + | chr4.2:90249171-90249190 | MS.gene61163:intron | 45.0% | |
| TTAGGCTGGACATCTTCATC+CGG | + | chr4.2:90249208-90249227 | MS.gene61163:intron | 45.0% | |
| ! | ATGAAGCATCTTGATGTGGC+TGG | + | chr4.2:90246831-90246850 | MS.gene61163:CDS | 45.0% |
| ! | CAAAGCGCTAGAGAATTGTG+TGG | + | chr4.2:90248437-90248456 | MS.gene61163:intron | 45.0% |
| !! | ATGAAGTATGGACTGGTCAG+AGG | + | chr4.2:90247211-90247230 | MS.gene61163:intron | 45.0% |
| !! | TGAAGTATGGACTGGTCAGA+GGG | + | chr4.2:90247212-90247231 | MS.gene61163:intron | 45.0% |
| !! | AATATAAATTATTTATAGAA+TGG | - | chr4.2:90246587-90246606 | None:intergenic | 5.0% |
| !! | AATTAAAAATTTAAGTAAAT+TGG | + | chr4.2:90247147-90247166 | MS.gene61163:intron | 5.0% |
| AAGCAGAGAGGGCTTCAAGA+CGG | + | chr4.2:90247563-90247582 | MS.gene61163:CDS | 50.0% | |
| AAGCATCTTGATGTGGCTGG+TGG | + | chr4.2:90246834-90246853 | MS.gene61163:CDS | 50.0% | |
| AGTCTAGAGACCCTCACAAG+TGG | - | chr4.2:90247307-90247326 | None:intergenic | 50.0% | |
| ATCCTACACCGGTGCAACAT+AGG | - | chr4.2:90246636-90246655 | None:intergenic | 50.0% | |
| CAGAAAAGGGTAACCCGTCA+CGG | - | chr4.2:90249471-90249490 | None:intergenic | 50.0% | |
| CAGCTGAATGTGGAAGACTG+GGG | - | chr4.2:90248995-90249014 | None:intergenic | 50.0% | |
| CATTCTCACGCCACCAGTTT+CGG | + | chr4.2:90246317-90246336 | MS.gene61163:CDS | 50.0% | |
| CATTTCCCTCCACCCAAACA+AGG | - | chr4.2:90247814-90247833 | None:intergenic | 50.0% | |
| CTCACATAACTGTGAGGTCC+CGG | - | chr4.2:90249242-90249261 | None:intergenic | 50.0% | |
| GGACTGTATGACTAGGACGA+TGG | - | chr4.2:90247344-90247363 | None:intergenic | 50.0% | |
| GGAGTGGTTGCCATTCATTC+AGG | + | chr4.2:90249590-90249609 | MS.gene61163:CDS | 50.0% | |
| GTGAGGAAGATGGGTCCAAT+TGG | + | chr4.2:90248886-90248905 | MS.gene61163:intron | 50.0% | |
| TAGGCTGGACATCTTCATCC+GGG | + | chr4.2:90249209-90249228 | MS.gene61163:intron | 50.0% | |
| TCACATAACTGTGAGGTCCC+GGG | - | chr4.2:90249241-90249260 | None:intergenic | 50.0% | |
| TCTTCATCCGGGTTCAAACC+CGG | + | chr4.2:90249220-90249239 | MS.gene61163:intron | 50.0% | |
| TGAGAATCTAGTTGGGGGAG+TGG | + | chr4.2:90249574-90249593 | MS.gene61163:CDS | 50.0% | |
| ! | AGATGGTTCCCTTGTTTGGG+TGG | + | chr4.2:90247802-90247821 | MS.gene61163:CDS | 50.0% |
| ! | CGAAGAAGAAAAGGCACGCA+TGG | + | chr4.2:90246458-90246477 | MS.gene61163:CDS | 50.0% |
| ! | GAAGAAAAGGCACGCATGGT+TGG | + | chr4.2:90246462-90246481 | MS.gene61163:CDS | 50.0% |
| CCATGGGGAGGTCCAATGAA+AGG | + | chr4.2:90247275-90247294 | MS.gene61163:intron | 55.0% | |
| CCTTTCATTGGACCTCCCCA+TGG | - | chr4.2:90247278-90247297 | None:intergenic | 55.0% | |
| CGCATAGGAGAGATGGTTGC+TGG | + | chr4.2:90248632-90248651 | MS.gene61163:CDS | 55.0% | |
| CTTCATCCGGGTTCAAACCC+GGG | + | chr4.2:90249221-90249240 | MS.gene61163:intron | 55.0% | |
| GCAACCATCTCTCCTATGCG+TGG | - | chr4.2:90248632-90248651 | None:intergenic | 55.0% | |
| GGCGTGAGAATGTAGAAGCC+TGG | - | chr4.2:90246309-90246328 | None:intergenic | 55.0% | |
| GGGGAGGTCCAATGAAAGGT+TGG | + | chr4.2:90247279-90247298 | MS.gene61163:intron | 55.0% | |
| GTGCTGGGTTGCATAGACTG+TGG | + | chr4.2:90246538-90246557 | MS.gene61163:CDS | 55.0% | |
| TAACCTGTGGGGGAAAACGC+CGG | - | chr4.2:90248694-90248713 | None:intergenic | 55.0% | |
| ! | GGTTCCCTTGTTTGGGTGGA+GGG | + | chr4.2:90247806-90247825 | MS.gene61163:CDS | 55.0% |
| ! | GTCCTATGTTGCACCGGTGT+AGG | + | chr4.2:90246631-90246650 | MS.gene61163:intron | 55.0% |
| ! | TGGTTCCCTTGTTTGGGTGG+AGG | + | chr4.2:90247805-90247824 | MS.gene61163:CDS | 55.0% |
| !! | AAACAGCGGGCTGCCGAAAA+AGG | + | chr4.2:90247659-90247678 | MS.gene61163:CDS | 55.0% |
| !! | GGGTATTGAAACATGGCGGC+AGG | + | chr4.2:90248046-90248065 | MS.gene61163:intron | 55.0% |
| CTTGATGTGGCTGGTGGCAC+AGG | + | chr4.2:90246840-90246859 | MS.gene61163:CDS | 60.0% | |
| TGAGGTCCCGGGTTTGAACC+CGG | - | chr4.2:90249230-90249249 | None:intergenic | 60.0% | |
| ! | TATCCGGCGTTTTCCCCCAC+AGG | + | chr4.2:90248688-90248707 | MS.gene61163:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 90246242 | 90249625 | 90246242 | ID=MS.gene61163 |
| chr4.2 | mRNA | 90246242 | 90249625 | 90246242 | ID=MS.gene61163.t1;Parent=MS.gene61163 |
| chr4.2 | exon | 90246242 | 90246338 | 90246242 | ID=MS.gene61163.t1.exon1;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90246242 | 90246338 | 90246242 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| chr4.2 | exon | 90246442 | 90246568 | 90246442 | ID=MS.gene61163.t1.exon2;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90246442 | 90246568 | 90246442 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| chr4.2 | exon | 90246800 | 90246861 | 90246800 | ID=MS.gene61163.t1.exon3;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90246800 | 90246861 | 90246800 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| chr4.2 | exon | 90247522 | 90247680 | 90247522 | ID=MS.gene61163.t1.exon4;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90247522 | 90247680 | 90247522 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| chr4.2 | exon | 90247792 | 90247936 | 90247792 | ID=MS.gene61163.t1.exon5;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90247792 | 90247936 | 90247792 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| chr4.2 | exon | 90248047 | 90248118 | 90248047 | ID=MS.gene61163.t1.exon6;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90248047 | 90248118 | 90248047 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| chr4.2 | exon | 90248601 | 90248709 | 90248601 | ID=MS.gene61163.t1.exon7;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90248601 | 90248709 | 90248601 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| chr4.2 | exon | 90249524 | 90249625 | 90249524 | ID=MS.gene61163.t1.exon8;Parent=MS.gene61163.t1 |
| chr4.2 | CDS | 90249524 | 90249625 | 90249524 | ID=cds.MS.gene61163.t1;Parent=MS.gene61163.t1 |
| Gene Sequence |
| Protein sequence |
