Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69867.t1 | XP_013463891.1 | 97.7 | 725 | 16 | 1 | 1 | 724 | 1 | 725 | 0.00E+00 | 1214.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69867.t1 | F4IRM4 | 52.2 | 715 | 310 | 8 | 28 | 724 | 40 | 740 | 6.7e-192 | 672.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69867.t1 | A0A072V8J2 | 97.7 | 725 | 16 | 1 | 1 | 724 | 1 | 725 | 0.0e+00 | 1214.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene69867 | 0.809099 | 2.24E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene69867 | 0.876352 | 1.49E-68 | -1.69E-46 |
| MS.gene049435 | MS.gene69867 | 0.825906 | 3.63E-54 | -1.69E-46 |
| MS.gene049452 | MS.gene69867 | 0.808942 | 2.42E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene69867 | 0.829576 | 4.76E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene69867 | 0.8155 | 8.95E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene69867 | 0.822326 | 2.52E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene69867 | 0.829525 | 4.90E-55 | -1.69E-46 |
| MS.gene050605 | MS.gene69867 | 0.834815 | 2.41E-56 | -1.69E-46 |
| MS.gene050623 | MS.gene69867 | -0.806505 | 7.96E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene69867 | 0.810762 | 9.81E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene69867 | 0.800527 | 1.38E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene69867 | 0.81628 | 6.00E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene69867 | 0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene69867 | 0.81387 | 2.06E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene69867 | 0.81349 | 2.49E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene69867 | 0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene69867 | 0.805283 | 1.44E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene69867 | 0.804708 | 1.90E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene69867 | 0.819352 | 1.21E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene69867 | 0.803517 | 3.36E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene69867 | 0.848481 | 5.96E-60 | -1.69E-46 |
| MS.gene051210 | MS.gene69867 | 0.826053 | 3.35E-54 | -1.69E-46 |
| MS.gene051800 | MS.gene69867 | 0.801179 | 1.02E-48 | -1.69E-46 |
| MS.gene052012 | MS.gene69867 | 0.832464 | 9.31E-56 | -1.69E-46 |
| MS.gene052020 | MS.gene69867 | 0.807453 | 5.02E-50 | -1.69E-46 |
| MS.gene05215 | MS.gene69867 | 0.813247 | 2.82E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene69867 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene69867 | 0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene69867 | 0.822815 | 1.94E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene69867 | 0.813715 | 2.22E-51 | -1.69E-46 |
| MS.gene052860 | MS.gene69867 | 0.810207 | 1.29E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene69867 | 0.834986 | 2.18E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene69867 | 0.839781 | 1.29E-57 | -1.69E-46 |
| MS.gene05289 | MS.gene69867 | 0.810623 | 1.05E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene69867 | 0.848064 | 7.77E-60 | -1.69E-46 |
| MS.gene053216 | MS.gene69867 | 0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene69867 | 0.810517 | 1.11E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene69867 | 0.823274 | 1.51E-53 | -1.69E-46 |
| MS.gene054472 | MS.gene69867 | 0.815315 | 9.85E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene69867 | 0.818103 | 2.33E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene69867 | 0.813538 | 2.43E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene69867 | 0.853961 | 1.69E-61 | -1.69E-46 |
| MS.gene05517 | MS.gene69867 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene055222 | MS.gene69867 | 0.811002 | 8.70E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene69867 | 0.8132 | 2.89E-51 | -1.69E-46 |
| MS.gene055608 | MS.gene69867 | 0.803744 | 3.01E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene69867 | 0.812244 | 4.67E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene69867 | 0.824934 | 6.17E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene69867 | 0.819365 | 1.21E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene69867 | 0.85286 | 3.50E-61 | -1.69E-46 |
| MS.gene05604 | MS.gene69867 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene056173 | MS.gene69867 | 0.808299 | 3.32E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene69867 | 0.800031 | 1.74E-48 | -1.69E-46 |
| MS.gene056480 | MS.gene69867 | 0.808517 | 2.98E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene69867 | 0.830667 | 2.58E-55 | -1.69E-46 |
| MS.gene056760 | MS.gene69867 | 0.825414 | 4.75E-54 | -1.69E-46 |
| MS.gene057140 | MS.gene69867 | 0.805261 | 1.45E-49 | -1.69E-46 |
| MS.gene057200 | MS.gene69867 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene69867 | 0.810658 | 1.03E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene69867 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene69867 | 0.850902 | 1.26E-60 | -1.69E-46 |
| MS.gene057915 | MS.gene69867 | 0.841796 | 3.82E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene69867 | 0.839483 | 1.54E-57 | -1.69E-46 |
| MS.gene058146 | MS.gene69867 | 0.829343 | 5.43E-55 | -1.69E-46 |
| MS.gene058548 | MS.gene69867 | 0.802029 | 6.81E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene69867 | 0.833794 | 4.35E-56 | -1.69E-46 |
| MS.gene058979 | MS.gene69867 | 0.82405 | 9.96E-54 | -1.69E-46 |
| MS.gene059128 | MS.gene69867 | 0.824301 | 8.69E-54 | -1.69E-46 |
| MS.gene059161 | MS.gene69867 | 0.834031 | 3.79E-56 | -1.69E-46 |
| MS.gene059249 | MS.gene69867 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene69867 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene059331 | MS.gene69867 | 0.809088 | 2.25E-50 | -1.69E-46 |
| MS.gene059335 | MS.gene69867 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene69867 | 0.816697 | 4.84E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene69867 | 0.803868 | 2.84E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene69867 | 0.84102 | 6.12E-58 | -1.69E-46 |
| MS.gene060011 | MS.gene69867 | 0.838546 | 2.70E-57 | -1.69E-46 |
| MS.gene060296 | MS.gene69867 | 0.810407 | 1.17E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene69867 | 0.833274 | 5.86E-56 | -1.69E-46 |
| MS.gene060322 | MS.gene69867 | 0.820485 | 6.69E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene69867 | 0.81131 | 7.46E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene69867 | 0.827344 | 1.65E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene69867 | 0.837527 | 4.93E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene69867 | 0.839598 | 1.44E-57 | -1.69E-46 |
| MS.gene060802 | MS.gene69867 | 0.849923 | 2.37E-60 | -1.69E-46 |
| MS.gene060803 | MS.gene69867 | 0.871363 | 7.24E-67 | -1.69E-46 |
| MS.gene060998 | MS.gene69867 | 0.85991 | 2.98E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69867.t1 | MTR_2g451540 | 97.655 | 725 | 16 | 1 | 1 | 724 | 1 | 725 | 0.0 | 1454 |
| MS.gene69867.t1 | MTR_1g012840 | 50.748 | 735 | 320 | 13 | 1 | 722 | 1 | 706 | 0.0 | 702 |
| MS.gene69867.t1 | MTR_4g132780 | 38.482 | 738 | 343 | 15 | 24 | 670 | 22 | 739 | 1.96e-148 | 451 |
| MS.gene69867.t1 | MTR_2g025130 | 40.940 | 447 | 223 | 7 | 237 | 675 | 29 | 442 | 1.88e-101 | 319 |
| MS.gene69867.t1 | MTR_7g059150 | 36.752 | 117 | 69 | 2 | 37 | 150 | 92 | 206 | 5.10e-15 | 76.3 |
| MS.gene69867.t1 | MTR_2g090135 | 34.188 | 117 | 72 | 2 | 37 | 150 | 95 | 209 | 1.24e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69867.t1 | AT2G25290 | 53.482 | 718 | 296 | 12 | 28 | 724 | 40 | 740 | 0.0 | 730 |
| MS.gene69867.t1 | AT2G25290 | 53.482 | 718 | 296 | 12 | 28 | 724 | 40 | 740 | 0.0 | 730 |
| MS.gene69867.t1 | AT2G25290 | 53.482 | 718 | 296 | 12 | 28 | 724 | 40 | 740 | 0.0 | 730 |
| MS.gene69867.t1 | AT2G25290 | 53.482 | 718 | 296 | 12 | 28 | 724 | 40 | 740 | 0.0 | 730 |
| MS.gene69867.t1 | AT4G32070 | 50.397 | 756 | 305 | 14 | 25 | 724 | 36 | 777 | 0.0 | 709 |
| MS.gene69867.t1 | AT4G32070 | 50.397 | 756 | 305 | 14 | 25 | 724 | 36 | 777 | 0.0 | 709 |
| MS.gene69867.t1 | AT5G20360 | 47.557 | 696 | 336 | 10 | 37 | 720 | 123 | 801 | 0.0 | 605 |
| MS.gene69867.t1 | AT5G20360 | 47.557 | 696 | 336 | 10 | 37 | 720 | 123 | 801 | 0.0 | 605 |
| MS.gene69867.t1 | AT5G20360 | 47.557 | 696 | 336 | 10 | 37 | 720 | 113 | 791 | 0.0 | 605 |
| MS.gene69867.t1 | AT5G20360 | 47.845 | 696 | 334 | 11 | 37 | 720 | 63 | 741 | 0.0 | 604 |
| MS.gene69867.t1 | AT5G20360 | 47.845 | 696 | 334 | 11 | 37 | 720 | 63 | 741 | 0.0 | 604 |
| MS.gene69867.t1 | AT5G20360 | 47.845 | 696 | 334 | 11 | 37 | 720 | 33 | 711 | 0.0 | 603 |
| MS.gene69867.t1 | AT5G20360 | 47.845 | 696 | 334 | 11 | 37 | 720 | 33 | 711 | 0.0 | 603 |
| MS.gene69867.t1 | AT1G62390 | 38.235 | 714 | 362 | 13 | 27 | 673 | 38 | 739 | 6.97e-147 | 447 |
| MS.gene69867.t1 | AT4G30480 | 35.897 | 117 | 70 | 2 | 37 | 150 | 102 | 216 | 1.98e-12 | 68.9 |
Find 141 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGTCGAATTCAAATT+AGG | 0.124452 | 2.2:+36639565 | MS.gene69867:CDS |
| GGAGAAACAAGTGAAGAAAA+TGG | 0.245674 | 2.2:+36637708 | MS.gene69867:CDS |
| TCGAACAAGCGAAACTTTCT+TGG | 0.255608 | 2.2:+36639284 | MS.gene69867:CDS |
| CAACAATGCTGAGGAGAATA+TGG | 0.273348 | 2.2:+36639372 | MS.gene69867:CDS |
| TAACTTCTCTTAGCTGAAAA+AGG | 0.277893 | 2.2:-36638583 | None:intergenic |
| GGCGATTAATGAATGCAATT+TGG | 0.285660 | 2.2:+36637977 | MS.gene69867:CDS |
| AACAAAGCTTTACCGTATTT+CGG | 0.290443 | 2.2:-36638014 | None:intergenic |
| TGATCGTCCTCAGCCTTATT+TGG | 0.310717 | 2.2:-36638371 | None:intergenic |
| CAGCTCTAGCATTGTTCAAT+TGG | 0.314408 | 2.2:+36639059 | MS.gene69867:CDS |
| TTCACCACACAACCGTTCTT+AGG | 0.315293 | 2.2:-36638824 | None:intergenic |
| GGACAACATTGCACCAAATA+AGG | 0.323321 | 2.2:+36638358 | MS.gene69867:CDS |
| CACTTGTCGAATTCAAATTA+GGG | 0.324137 | 2.2:+36639566 | MS.gene69867:CDS |
| GCTGAGGAGAATATGGAAAA+AGG | 0.329603 | 2.2:+36639379 | MS.gene69867:CDS |
| TCATAGAATGGATCGTGATT+AGG | 0.339265 | 2.2:-36638755 | None:intergenic |
| TTATGAGGCTTTGAATAGAT+TGG | 0.361909 | 2.2:+36638052 | MS.gene69867:CDS |
| AGGAGTTTCATCCTTTCGTT+TGG | 0.362101 | 2.2:+36639857 | MS.gene69867:CDS |
| TACGAAGGCTTTCTTGCTCT+TGG | 0.363383 | 2.2:+36639250 | MS.gene69867:CDS |
| TCTTCCTTGCCCTAGACATA+TGG | 0.376454 | 2.2:-36639090 | None:intergenic |
| AGCTCTAGCATTGTTCAATT+GGG | 0.381899 | 2.2:+36639060 | MS.gene69867:CDS |
| TGCCTCCGGCCATGTCAAAT+AGG | 0.397488 | 2.2:-36639021 | None:intergenic |
| AAATTAAAAGTTCGTATGAA+TGG | 0.399777 | 2.2:+36639161 | MS.gene69867:CDS |
| TAAGCAGAAAGAGGATGTTA+AGG | 0.407983 | 2.2:+36638451 | MS.gene69867:CDS |
| GAATTGAAGTGGGCTGAAAC+AGG | 0.411735 | 2.2:+36638692 | MS.gene69867:CDS |
| TCCAACGCCATGATATTATT+CGG | 0.416082 | 2.2:-36638116 | None:intergenic |
| TCAAATAACACTGCTGTAGA+TGG | 0.416089 | 2.2:+36639688 | MS.gene69867:CDS |
| TGATGTGGAAAAGGTTGAAA+TGG | 0.417154 | 2.2:+36638793 | MS.gene69867:CDS |
| TATAAGATGGGCTCAATTGC+CGG | 0.418935 | 2.2:+36638550 | MS.gene69867:CDS |
| ACCTCCACTACCGGGTTGGA+TGG | 0.420004 | 2.2:+36639445 | MS.gene69867:CDS |
| GAGAAACAAGTGAAGAAAAT+GGG | 0.422130 | 2.2:+36637709 | MS.gene69867:CDS |
| ACAAGAACTGCTCCTAGGCT+TGG | 0.427912 | 2.2:-36638620 | None:intergenic |
| ACCCGTATGGCATGAATCAT+TGG | 0.428713 | 2.2:+36639591 | MS.gene69867:CDS |
| AACATTACAGCTACATCTGT+TGG | 0.438941 | 2.2:-36639652 | None:intergenic |
| CTCAGTGAAACCTCCACTAC+CGG | 0.444276 | 2.2:+36639436 | MS.gene69867:CDS |
| GCTCATCTTGTGTTGAGGAT+TGG | 0.446370 | 2.2:+36638864 | MS.gene69867:CDS |
| CTCTTTAGAAGAATCTTCTT+CGG | 0.446759 | 2.2:-36639125 | None:intergenic |
| TAAGAGAAGTTATTTGTGAC+AGG | 0.451205 | 2.2:+36638594 | MS.gene69867:CDS |
| ATGCTAGAGCTGTCATCTCT+TGG | 0.452894 | 2.2:-36639048 | None:intergenic |
| AATTAAAAGTTCGTATGAAT+GGG | 0.453467 | 2.2:+36639162 | MS.gene69867:CDS |
| AGACGAAGTTTCTCATAGAA+TGG | 0.453833 | 2.2:-36638767 | None:intergenic |
| TGGAACCCTTGTTCAGAAGA+AGG | 0.469010 | 2.2:+36639877 | MS.gene69867:CDS |
| AAACATGGTTCGACATAATC+CGG | 0.470341 | 2.2:-36638212 | None:intergenic |
| CAAGAACTGCTCCTAGGCTT+GGG | 0.471193 | 2.2:-36638619 | None:intergenic |
| TGCTATATGCAGATGGGACT+TGG | 0.472267 | 2.2:+36637942 | MS.gene69867:CDS |
| GTCGTATGTGCGGAGTAATA+TGG | 0.475460 | 2.2:+36637914 | MS.gene69867:CDS |
| CGATACCCTTCTTCTGAACA+AGG | 0.481644 | 2.2:-36639883 | None:intergenic |
| CAGAAAGAATACGCAAAAGC+TGG | 0.482194 | 2.2:+36639187 | MS.gene69867:CDS |
| GGGGAAATGTCCATATGTCT+AGG | 0.483385 | 2.2:+36639080 | MS.gene69867:CDS |
| AAAAGTGCACTTGAAGATAG+AGG | 0.485144 | 2.2:+36638155 | MS.gene69867:CDS |
| GTCACAGATAAATCTCTTGT+GGG | 0.488756 | 2.2:+36639522 | MS.gene69867:CDS |
| TGGGACTTGGTGAGTACCCT+AGG | 0.490644 | 2.2:+36637955 | MS.gene69867:CDS |
| TAACCCATCCAACCCGGTAG+TGG | 0.491029 | 2.2:-36639449 | None:intergenic |
| AGATGAAACTGCTGCGTTGG+CGG | 0.492983 | 2.2:+36639489 | MS.gene69867:CDS |
| GAAGAGAGCGAGGTGTTATG+AGG | 0.496712 | 2.2:+36638037 | MS.gene69867:CDS |
| CAAAATTGATGAAATAGTAC+AGG | 0.497762 | 2.2:+36639797 | MS.gene69867:CDS |
| TACTTTGTTGTTTATTGCCA+CGG | 0.500099 | 2.2:+36637779 | MS.gene69867:CDS |
| TATCATGGCGTTGGAGATCT+CGG | 0.501474 | 2.2:+36638124 | MS.gene69867:CDS |
| GTGGGCTGAAACAGGATCAC+AGG | 0.502534 | 2.2:+36638700 | MS.gene69867:CDS |
| TTCCAATGATTCATGCCATA+CGG | 0.509759 | 2.2:-36639593 | None:intergenic |
| GGCGTTGGAGATCTCGGATA+AGG | 0.510091 | 2.2:+36638130 | MS.gene69867:CDS |
| GTAATAAGATGTTTCAAAAG+AGG | 0.513730 | 2.2:+36637823 | MS.gene69867:CDS |
| GAAACTAGAAGAGAAGAAAG+AGG | 0.517302 | 2.2:+36638337 | MS.gene69867:CDS |
| ATTTGACAAGAACTGCTCCT+AGG | 0.517827 | 2.2:-36638625 | None:intergenic |
| GCCGAATAATATCATGGCGT+TGG | 0.518149 | 2.2:+36638115 | MS.gene69867:CDS |
| CTTGAAGTTACTCCGAAATA+CGG | 0.519201 | 2.2:+36638002 | MS.gene69867:CDS |
| ACGATCATCTCAAAGAGAAA+AGG | 0.520870 | 2.2:+36638387 | MS.gene69867:CDS |
| GTATCATTATCATACGCATT+CGG | 0.522823 | 2.2:-36637759 | None:intergenic |
| TCGTCTGAATGATGTGGAAA+AGG | 0.524502 | 2.2:+36638784 | MS.gene69867:CDS |
| CCTCCACTACCGGGTTGGAT+GGG | 0.524928 | 2.2:+36639446 | MS.gene69867:CDS |
| TCAAATTAGGGCTACCCGTA+TGG | 0.527716 | 2.2:+36639578 | MS.gene69867:CDS |
| TCCAATGATTCATGCCATAC+GGG | 0.528365 | 2.2:-36639592 | None:intergenic |
| GAGGGATCTTCGAGGAGCTA+TGG | 0.528661 | 2.2:+36637842 | MS.gene69867:CDS |
| GGAACCCTTGTTCAGAAGAA+GGG | 0.530230 | 2.2:+36639878 | MS.gene69867:CDS |
| ATTGAGAAGTTTGAACATGC+AGG | 0.538923 | 2.2:+36639622 | MS.gene69867:CDS |
| CAAGGCCTATTTGACATGGC+CGG | 0.539119 | 2.2:+36639016 | MS.gene69867:CDS |
| TTGCATTCATTAATCGCCCT+AGG | 0.542158 | 2.2:-36637972 | None:intergenic |
| TTGCTTCTCTACAATTTCAT+CGG | 0.546575 | 2.2:-36638306 | None:intergenic |
| TAATAAGATGTTTCAAAAGA+GGG | 0.549709 | 2.2:+36637824 | MS.gene69867:CDS |
| GCTCAAGAGTTGAAGGAAGA+AGG | 0.551067 | 2.2:+36637801 | MS.gene69867:CDS |
| TGCCACGGCTCAAGAGTTGA+AGG | 0.552666 | 2.2:+36637794 | MS.gene69867:CDS |
| TGTTAGCTCATCTTGTGTTG+AGG | 0.554112 | 2.2:+36638859 | MS.gene69867:CDS |
| TTCAAATAACCCATCCAACC+CGG | 0.554807 | 2.2:-36639455 | None:intergenic |
| TGAGAAAATTGAGTTGCCTC+CGG | 0.555411 | 2.2:+36638193 | MS.gene69867:CDS |
| TTCCTTCAACTCTTGAGCCG+TGG | 0.557472 | 2.2:-36637796 | None:intergenic |
| TTCAGAGGCTGTTGAAGAGA+CGG | 0.558155 | 2.2:+36638976 | MS.gene69867:CDS |
| ATGAAAATCTAAGTATCTGT+CGG | 0.561644 | 2.2:-36638933 | None:intergenic |
| CATCTCTTGGAACTTGCCTC+CGG | 0.563893 | 2.2:-36639035 | None:intergenic |
| GACACATCTATATGATCTCT+CGG | 0.563958 | 2.2:-36637894 | None:intergenic |
| ATCAGATGAAACTGCTGCGT+TGG | 0.568185 | 2.2:+36639486 | MS.gene69867:CDS |
| TGTGACAGGTTCCCAAGCCT+AGG | 0.568790 | 2.2:+36638608 | MS.gene69867:CDS |
| GGGAAATGTCCATATGTCTA+GGG | 0.571738 | 2.2:+36639081 | MS.gene69867:CDS |
| GGTCACAGATAAATCTCTTG+TGG | 0.578048 | 2.2:+36639521 | MS.gene69867:CDS |
| CCCATCCAACCCGGTAGTGG+AGG | 0.578546 | 2.2:-36639446 | None:intergenic |
| CTGCGTTGGCGGCAAACATG+AGG | 0.582213 | 2.2:+36639500 | MS.gene69867:CDS |
| TTGATGAAATAGTACAGGCA+TGG | 0.582822 | 2.2:+36639802 | MS.gene69867:CDS |
| ATGGATAATGCTCCTAAGAA+CGG | 0.586076 | 2.2:+36638812 | MS.gene69867:CDS |
| ATCTTCGAGGAGCTATGGTA+AGG | 0.587773 | 2.2:+36637847 | MS.gene69867:CDS |
| GATGGAGCCGAATAATATCA+TGG | 0.587956 | 2.2:+36638109 | MS.gene69867:CDS |
| TCAGAAGGCACGTCAAAACA+TGG | 0.590503 | 2.2:-36638227 | None:intergenic |
| GCTCTAGCATTGTTCAATTG+GGG | 0.591057 | 2.2:+36639061 | MS.gene69867:CDS |
| TGCATTCATTAATCGCCCTA+GGG | 0.591150 | 2.2:-36637971 | None:intergenic |
| CTTCGGATGAAGAATTGAAG+TGG | 0.591646 | 2.2:+36638681 | MS.gene69867:CDS |
| GGCTGCGTGCTATATGCAGA+TGG | 0.591996 | 2.2:+36637935 | MS.gene69867:CDS |
| GAACAAGGGTTCCAAACGAA+AGG | 0.595231 | 2.2:-36639868 | None:intergenic |
| TGAAACCTCCACTACCGGGT+TGG | 0.596224 | 2.2:+36639441 | MS.gene69867:CDS |
| GCAGAAAGAGGATGTTAAGG+AGG | 0.597588 | 2.2:+36638454 | MS.gene69867:CDS |
| TTTCAAAAGAGGGATCTTCG+AGG | 0.598758 | 2.2:+36637834 | MS.gene69867:CDS |
| ACCTCTGTGGAGGGCCATGT+CGG | 0.600718 | 2.2:-36639337 | None:intergenic |
| CTCATACAAGCTCAAAGGCA+TGG | 0.603320 | 2.2:-36639914 | None:intergenic |
| CAGCAGTGTTATTTGAACAG+TGG | 0.607319 | 2.2:-36639681 | None:intergenic |
| GTCAAATATAGAGATCAAGA+AGG | 0.619076 | 2.2:+36638641 | MS.gene69867:CDS |
| TTCGGATGAAGAATTGAAGT+GGG | 0.621321 | 2.2:+36638682 | MS.gene69867:CDS |
| TCATCTTTACAACAATGCTG+AGG | 0.623420 | 2.2:+36639363 | MS.gene69867:CDS |
| AAAGTGCACTTGAAGATAGA+GGG | 0.624772 | 2.2:+36638156 | MS.gene69867:CDS |
| TCAGTGAAACCTCCACTACC+GGG | 0.624891 | 2.2:+36639437 | MS.gene69867:CDS |
| AGCAACTCATACAAGCTCAA+AGG | 0.626181 | 2.2:-36639919 | None:intergenic |
| ATGTCCATATGTCTAGGGCA+AGG | 0.632863 | 2.2:+36639086 | MS.gene69867:CDS |
| GCTGCGTGCTATATGCAGAT+GGG | 0.637013 | 2.2:+36637936 | MS.gene69867:CDS |
| ATATAGATGTGTCGTATGTG+CGG | 0.638921 | 2.2:+36637904 | MS.gene69867:CDS |
| GGCCTATTTGACATGGCCGG+AGG | 0.639584 | 2.2:+36639019 | MS.gene69867:CDS |
| TAGCTTCTACTATATACAGT+CGG | 0.639708 | 2.2:-36638730 | None:intergenic |
| CGGTTGTGTGGTGAAATCAA+AGG | 0.641172 | 2.2:+36638832 | MS.gene69867:CDS |
| CATTGCACCAAATAAGGCTG+AGG | 0.641965 | 2.2:+36638364 | MS.gene69867:CDS |
| TGGGATGAAGCTCTATTCAG+AGG | 0.644129 | 2.2:+36638961 | MS.gene69867:CDS |
| GAAACTTCGTCTGAATGATG+TGG | 0.644851 | 2.2:+36638778 | MS.gene69867:CDS |
| AAGATGAAGAACCTCTGTGG+AGG | 0.649172 | 2.2:-36639347 | None:intergenic |
| GGGACTTGGTGAGTACCCTA+GGG | 0.649406 | 2.2:+36637956 | MS.gene69867:CDS |
| TGACTTGATCACAATCACTT+CGG | 0.649854 | 2.2:+36638664 | MS.gene69867:CDS |
| AATTGTAGAGAAGCAAGCTG+AGG | 0.649987 | 2.2:+36638313 | MS.gene69867:CDS |
| AGATGAAGAACCTCTGTGGA+GGG | 0.653251 | 2.2:-36639346 | None:intergenic |
| AGCGCAAGGCCTATTTGACA+TGG | 0.654459 | 2.2:+36639012 | MS.gene69867:CDS |
| AAGCTTTGTTGAAGAGAGCG+AGG | 0.655766 | 2.2:+36638027 | MS.gene69867:CDS |
| GATACCCTTCTTCTGAACAA+GGG | 0.665677 | 2.2:-36639882 | None:intergenic |
| TGGGCTGAAACAGGATCACA+GGG | 0.676880 | 2.2:+36638701 | MS.gene69867:CDS |
| GTTACAAGTGAAGAAGCGCA+AGG | 0.684935 | 2.2:+36638998 | MS.gene69867:CDS |
| TGCTCCTAAGAACGGTTGTG+TGG | 0.685154 | 2.2:+36638820 | MS.gene69867:CDS |
| AATGGGAATCATAGCAACGA+CGG | 0.698124 | 2.2:+36637726 | MS.gene69867:CDS |
| TCACAGATAAATCTCTTGTG+GGG | 0.699010 | 2.2:+36639523 | MS.gene69867:CDS |
| GTAATATAGATTTACCGACA+TGG | 0.713914 | 2.2:+36639323 | MS.gene69867:CDS |
| CATGGTTCGACATAATCCGG+AGG | 0.727574 | 2.2:-36638209 | None:intergenic |
| ACCGACATGGCCCTCCACAG+AGG | 0.742103 | 2.2:+36639336 | MS.gene69867:CDS |
| GTAAAGATGAAGAACCTCTG+TGG | 0.749593 | 2.2:-36639350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCTGACTTAATTTTAA+TGG | - | chr2.2:36639230-36639249 | None:intergenic | 15.0% |
| !! | AAATTAAAAGTTCGTATGAA+TGG | + | chr2.2:36639161-36639180 | MS.gene69867:CDS | 20.0% |
| !! | AATTAAAAGTTCGTATGAAT+GGG | + | chr2.2:36639162-36639181 | MS.gene69867:CDS | 20.0% |
| !! | ATATGATAACATATCTATTC+AGG | - | chr2.2:36639745-36639764 | None:intergenic | 20.0% |
| !! | TAATAAGATGTTTCAAAAGA+GGG | + | chr2.2:36637824-36637843 | MS.gene69867:CDS | 20.0% |
| ! | AAAAATTGATAAGCAGAAAG+AGG | + | chr2.2:36638442-36638461 | MS.gene69867:CDS | 25.0% |
| ! | ATGAAAATCTAAGTATCTGT+CGG | - | chr2.2:36638936-36638955 | None:intergenic | 25.0% |
| ! | CAAAATTGATGAAATAGTAC+AGG | + | chr2.2:36639797-36639816 | MS.gene69867:CDS | 25.0% |
| ! | GTAATAAGATGTTTCAAAAG+AGG | + | chr2.2:36637823-36637842 | MS.gene69867:CDS | 25.0% |
| ! | GTCAATGAAGAAAAAAGTAA+TGG | + | chr2.2:36638476-36638495 | MS.gene69867:CDS | 25.0% |
| !! | ACTTAGATTTTCATGAACTT+GGG | + | chr2.2:36638942-36638961 | MS.gene69867:CDS | 25.0% |
| !! | ATTAAGTCAGATTTTTACGA+AGG | + | chr2.2:36639235-36639254 | MS.gene69867:CDS | 25.0% |
| !! | TACTTAGATTTTCATGAACT+TGG | + | chr2.2:36638941-36638960 | MS.gene69867:CDS | 25.0% |
| !!! | AAAACAGCAAAACTTGTTTT+TGG | + | chr2.2:36638521-36638540 | MS.gene69867:CDS | 25.0% |
| !!! | TTTTGGTGATGATATAAGAT+GGG | + | chr2.2:36638538-36638557 | MS.gene69867:CDS | 25.0% |
| !!! | TTTTTGGTGATGATATAAGA+TGG | + | chr2.2:36638537-36638556 | MS.gene69867:CDS | 25.0% |
| AACAAAGCTTTACCGTATTT+CGG | - | chr2.2:36638017-36638036 | None:intergenic | 30.0% | |
| AACTGTTCAAAAATCACGTT+GGG | + | chr2.2:36638903-36638922 | MS.gene69867:CDS | 30.0% | |
| ATACTAACACTTCTTCTAAC+AGG | + | chr2.2:36639765-36639784 | MS.gene69867:intron | 30.0% | |
| CACTTGTCGAATTCAAATTA+GGG | + | chr2.2:36639566-36639585 | MS.gene69867:CDS | 30.0% | |
| GAAAAAGAGCAAAAAAGAGA+AGG | + | chr2.2:36638274-36638293 | MS.gene69867:CDS | 30.0% | |
| GAGAAACAAGTGAAGAAAAT+GGG | + | chr2.2:36637709-36637728 | MS.gene69867:CDS | 30.0% | |
| GCGTAATAAATCGAAAAAGA+AGG | + | chr2.2:36638409-36638428 | MS.gene69867:CDS | 30.0% | |
| GTAATATAGATTTACCGACA+TGG | + | chr2.2:36639323-36639342 | MS.gene69867:CDS | 30.0% | |
| GTATCATTATCATACGCATT+CGG | - | chr2.2:36637762-36637781 | None:intergenic | 30.0% | |
| GTCAAATATAGAGATCAAGA+AGG | + | chr2.2:36638641-36638660 | MS.gene69867:CDS | 30.0% | |
| TAACTTCTCTTAGCTGAAAA+AGG | - | chr2.2:36638586-36638605 | None:intergenic | 30.0% | |
| TAAGAGAAGTTATTTGTGAC+AGG | + | chr2.2:36638594-36638613 | MS.gene69867:CDS | 30.0% | |
| TAGCTTCTACTATATACAGT+CGG | - | chr2.2:36638733-36638752 | None:intergenic | 30.0% | |
| TCACTTGTCGAATTCAAATT+AGG | + | chr2.2:36639565-36639584 | MS.gene69867:CDS | 30.0% | |
| TTGCTTCTCTACAATTTCAT+CGG | - | chr2.2:36638309-36638328 | None:intergenic | 30.0% | |
| ! | CTCTTTAGAAGAATCTTCTT+CGG | - | chr2.2:36639128-36639147 | None:intergenic | 30.0% |
| !! | TACTTTGTTGTTTATTGCCA+CGG | + | chr2.2:36637779-36637798 | MS.gene69867:CDS | 30.0% |
| !! | TTATGAGGCTTTGAATAGAT+TGG | + | chr2.2:36638052-36638071 | MS.gene69867:CDS | 30.0% |
| !!! | ACAAGTTTTGCTGTTTTCTT+AGG | - | chr2.2:36638518-36638537 | None:intergenic | 30.0% |
| !!! | CTGCTTATCAATTTTTTCCT+TGG | - | chr2.2:36638438-36638457 | None:intergenic | 30.0% |
| !!! | TGTTAGTACTGTTTTGAAGA+TGG | + | chr2.2:36638091-36638110 | MS.gene69867:CDS | 30.0% |
| AAACATGGTTCGACATAATC+CGG | - | chr2.2:36638215-36638234 | None:intergenic | 35.0% | |
| AAAGTGCACTTGAAGATAGA+GGG | + | chr2.2:36638156-36638175 | MS.gene69867:CDS | 35.0% | |
| AACATTACAGCTACATCTGT+TGG | - | chr2.2:36639655-36639674 | None:intergenic | 35.0% | |
| ACGATCATCTCAAAGAGAAA+AGG | + | chr2.2:36638387-36638406 | MS.gene69867:CDS | 35.0% | |
| AGACGAAGTTTCTCATAGAA+TGG | - | chr2.2:36638770-36638789 | None:intergenic | 35.0% | |
| ATATAGATGTGTCGTATGTG+CGG | + | chr2.2:36637904-36637923 | MS.gene69867:CDS | 35.0% | |
| ATGGATAATGCTCCTAAGAA+CGG | + | chr2.2:36638812-36638831 | MS.gene69867:CDS | 35.0% | |
| ATTGAGAAGTTTGAACATGC+AGG | + | chr2.2:36639622-36639641 | MS.gene69867:CDS | 35.0% | |
| CAACTGTTCAAAAATCACGT+TGG | + | chr2.2:36638902-36638921 | MS.gene69867:CDS | 35.0% | |
| CTTGAAGTTACTCCGAAATA+CGG | + | chr2.2:36638002-36638021 | MS.gene69867:CDS | 35.0% | |
| GAAACTAGAAGAGAAGAAAG+AGG | + | chr2.2:36638337-36638356 | MS.gene69867:CDS | 35.0% | |
| GAAGCTAAAAAGTTGCAGAA+AGG | + | chr2.2:36639837-36639856 | MS.gene69867:CDS | 35.0% | |
| GACACATCTATATGATCTCT+CGG | - | chr2.2:36637897-36637916 | None:intergenic | 35.0% | |
| GGAAAAAGGAATGCTGATAT+GGG | + | chr2.2:36639393-36639412 | MS.gene69867:CDS | 35.0% | |
| GGAGAAACAAGTGAAGAAAA+TGG | + | chr2.2:36637708-36637727 | MS.gene69867:CDS | 35.0% | |
| GGCGATTAATGAATGCAATT+TGG | + | chr2.2:36637977-36637996 | MS.gene69867:CDS | 35.0% | |
| GTCACAGATAAATCTCTTGT+GGG | + | chr2.2:36639522-36639541 | MS.gene69867:CDS | 35.0% | |
| TAAGCAGAAAGAGGATGTTA+AGG | + | chr2.2:36638451-36638470 | MS.gene69867:CDS | 35.0% | |
| TCAAATAACACTGCTGTAGA+TGG | + | chr2.2:36639688-36639707 | MS.gene69867:CDS | 35.0% | |
| TCACAGATAAATCTCTTGTG+GGG | + | chr2.2:36639523-36639542 | MS.gene69867:CDS | 35.0% | |
| TCATAGAATGGATCGTGATT+AGG | - | chr2.2:36638758-36638777 | None:intergenic | 35.0% | |
| TCATCTTTACAACAATGCTG+AGG | + | chr2.2:36639363-36639382 | MS.gene69867:CDS | 35.0% | |
| TCCAACGCCATGATATTATT+CGG | - | chr2.2:36638119-36638138 | None:intergenic | 35.0% | |
| TGAAAAAGGCTGCAATTAAC+CGG | - | chr2.2:36638572-36638591 | None:intergenic | 35.0% | |
| TGACTTGATCACAATCACTT+CGG | + | chr2.2:36638664-36638683 | MS.gene69867:CDS | 35.0% | |
| TGATGTGGAAAAGGTTGAAA+TGG | + | chr2.2:36638793-36638812 | MS.gene69867:CDS | 35.0% | |
| TGGAAAAAGGAATGCTGATA+TGG | + | chr2.2:36639392-36639411 | MS.gene69867:CDS | 35.0% | |
| TTCCAATGATTCATGCCATA+CGG | - | chr2.2:36639596-36639615 | None:intergenic | 35.0% | |
| TTCGGATGAAGAATTGAAGT+GGG | + | chr2.2:36638682-36638701 | MS.gene69867:CDS | 35.0% | |
| TTGATGAAATAGTACAGGCA+TGG | + | chr2.2:36639802-36639821 | MS.gene69867:CDS | 35.0% | |
| ! | AAAAGTGCACTTGAAGATAG+AGG | + | chr2.2:36638155-36638174 | MS.gene69867:CDS | 35.0% |
| ! | AGCTCTAGCATTGTTCAATT+GGG | + | chr2.2:36639060-36639079 | MS.gene69867:CDS | 35.0% |
| ! | TTTTCTTTCGCCTTTTCAGA+AGG | - | chr2.2:36638245-36638264 | None:intergenic | 35.0% |
| AATGGGAATCATAGCAACGA+CGG | + | chr2.2:36637726-36637745 | MS.gene69867:CDS | 40.0% | |
| AATTGTAGAGAAGCAAGCTG+AGG | + | chr2.2:36638313-36638332 | MS.gene69867:CDS | 40.0% | |
| ACACTTCTTCTAACAGGTCT+AGG | + | chr2.2:36639771-36639790 | MS.gene69867:intron | 40.0% | |
| AGGAGTTTCATCCTTTCGTT+TGG | + | chr2.2:36639857-36639876 | MS.gene69867:CDS | 40.0% | |
| ATTTGACAAGAACTGCTCCT+AGG | - | chr2.2:36638628-36638647 | None:intergenic | 40.0% | |
| CAACAATGCTGAGGAGAATA+TGG | + | chr2.2:36639372-36639391 | MS.gene69867:CDS | 40.0% | |
| CAGAAAGAATACGCAAAAGC+TGG | + | chr2.2:36639187-36639206 | MS.gene69867:CDS | 40.0% | |
| CTTCGGATGAAGAATTGAAG+TGG | + | chr2.2:36638681-36638700 | MS.gene69867:CDS | 40.0% | |
| GAAACTTCGTCTGAATGATG+TGG | + | chr2.2:36638778-36638797 | MS.gene69867:CDS | 40.0% | |
| GAGCAAAAAAGAGAAGGTGA+AGG | + | chr2.2:36638280-36638299 | MS.gene69867:CDS | 40.0% | |
| GATACCCTTCTTCTGAACAA+GGG | - | chr2.2:36639885-36639904 | None:intergenic | 40.0% | |
| GATGGAGCCGAATAATATCA+TGG | + | chr2.2:36638109-36638128 | MS.gene69867:CDS | 40.0% | |
| GCTCTAGCATTGTTCAATTG+GGG | + | chr2.2:36639061-36639080 | MS.gene69867:CDS | 40.0% | |
| GCTGAGGAGAATATGGAAAA+AGG | + | chr2.2:36639379-36639398 | MS.gene69867:CDS | 40.0% | |
| GGACAACATTGCACCAAATA+AGG | + | chr2.2:36638358-36638377 | MS.gene69867:CDS | 40.0% | |
| GGGAAATGTCCATATGTCTA+GGG | + | chr2.2:36639081-36639100 | MS.gene69867:CDS | 40.0% | |
| GGGAAGAAAAAGAAGCAAGT+AGG | + | chr2.2:36637687-36637706 | MS.gene69867:CDS | 40.0% | |
| GGTCACAGATAAATCTCTTG+TGG | + | chr2.2:36639521-36639540 | MS.gene69867:CDS | 40.0% | |
| GTAAAGATGAAGAACCTCTG+TGG | - | chr2.2:36639353-36639372 | None:intergenic | 40.0% | |
| TCCAATGATTCATGCCATAC+GGG | - | chr2.2:36639595-36639614 | None:intergenic | 40.0% | |
| TCGAACAAGCGAAACTTTCT+TGG | + | chr2.2:36639284-36639303 | MS.gene69867:CDS | 40.0% | |
| TCGTCTGAATGATGTGGAAA+AGG | + | chr2.2:36638784-36638803 | MS.gene69867:CDS | 40.0% | |
| TGCATTCATTAATCGCCCTA+GGG | - | chr2.2:36637974-36637993 | None:intergenic | 40.0% | |
| TGTTAGCTCATCTTGTGTTG+AGG | + | chr2.2:36638859-36638878 | MS.gene69867:CDS | 40.0% | |
| TTCAAATAACCCATCCAACC+CGG | - | chr2.2:36639458-36639477 | None:intergenic | 40.0% | |
| TTGCATTCATTAATCGCCCT+AGG | - | chr2.2:36637975-36637994 | None:intergenic | 40.0% | |
| TTTCAAAAGAGGGATCTTCG+AGG | + | chr2.2:36637834-36637853 | MS.gene69867:CDS | 40.0% | |
| ! | CAGCTCTAGCATTGTTCAAT+TGG | + | chr2.2:36639059-36639078 | MS.gene69867:CDS | 40.0% |
| ! | TATAAGATGGGCTCAATTGC+CGG | + | chr2.2:36638550-36638569 | MS.gene69867:CDS | 40.0% |
| ! | TGAGAAAATTGAGTTGCCTC+CGG | + | chr2.2:36638193-36638212 | MS.gene69867:CDS | 40.0% |
| !! | CAGCAGTGTTATTTGAACAG+TGG | - | chr2.2:36639684-36639703 | None:intergenic | 40.0% |
| !! | TTTTGACGTGCCTTCTGAAA+AGG | + | chr2.2:36638232-36638251 | MS.gene69867:CDS | 40.0% |
| AAGATGAAGAACCTCTGTGG+AGG | - | chr2.2:36639350-36639369 | None:intergenic | 45.0% | |
| ACCCGTATGGCATGAATCAT+TGG | + | chr2.2:36639591-36639610 | MS.gene69867:CDS | 45.0% | |
| AGATGAAGAACCTCTGTGGA+GGG | - | chr2.2:36639349-36639368 | None:intergenic | 45.0% | |
| ATCAGATGAAACTGCTGCGT+TGG | + | chr2.2:36639486-36639505 | MS.gene69867:CDS | 45.0% | |
| ATCGAAAAAGAAGGCAGCCA+AGG | + | chr2.2:36638418-36638437 | MS.gene69867:CDS | 45.0% | |
| ATCTTCGAGGAGCTATGGTA+AGG | + | chr2.2:36637847-36637866 | MS.gene69867:CDS | 45.0% | |
| ATGCTAGAGCTGTCATCTCT+TGG | - | chr2.2:36639051-36639070 | None:intergenic | 45.0% | |
| CATTGCACCAAATAAGGCTG+AGG | + | chr2.2:36638364-36638383 | MS.gene69867:CDS | 45.0% | |
| CGATACCCTTCTTCTGAACA+AGG | - | chr2.2:36639886-36639905 | None:intergenic | 45.0% | |
| CGGTTGTGTGGTGAAATCAA+AGG | + | chr2.2:36638832-36638851 | MS.gene69867:CDS | 45.0% | |
| GAACAAGGGTTCCAAACGAA+AGG | - | chr2.2:36639871-36639890 | None:intergenic | 45.0% | |
| GCAGAAAGAGGATGTTAAGG+AGG | + | chr2.2:36638454-36638473 | MS.gene69867:CDS | 45.0% | |
| GCCGAATAATATCATGGCGT+TGG | + | chr2.2:36638115-36638134 | MS.gene69867:CDS | 45.0% | |
| GCTCAAGAGTTGAAGGAAGA+AGG | + | chr2.2:36637801-36637820 | MS.gene69867:CDS | 45.0% | |
| GCTCATCTTGTGTTGAGGAT+TGG | + | chr2.2:36638864-36638883 | MS.gene69867:CDS | 45.0% | |
| GGAACCCTTGTTCAGAAGAA+GGG | + | chr2.2:36639878-36639897 | MS.gene69867:CDS | 45.0% | |
| GGGGAAATGTCCATATGTCT+AGG | + | chr2.2:36639080-36639099 | MS.gene69867:CDS | 45.0% | |
| GTCGTATGTGCGGAGTAATA+TGG | + | chr2.2:36637914-36637933 | MS.gene69867:CDS | 45.0% | |
| TACGAAGGCTTTCTTGCTCT+TGG | + | chr2.2:36639250-36639269 | MS.gene69867:CDS | 45.0% | |
| TCAAATTAGGGCTACCCGTA+TGG | + | chr2.2:36639578-36639597 | MS.gene69867:CDS | 45.0% | |
| TCTTCCTTGCCCTAGACATA+TGG | - | chr2.2:36639093-36639112 | None:intergenic | 45.0% | |
| TGCTATATGCAGATGGGACT+TGG | + | chr2.2:36637942-36637961 | MS.gene69867:CDS | 45.0% | |
| TGGAACCCTTGTTCAGAAGA+AGG | + | chr2.2:36639877-36639896 | MS.gene69867:CDS | 45.0% | |
| TGGGATGAAGCTCTATTCAG+AGG | + | chr2.2:36638961-36638980 | MS.gene69867:CDS | 45.0% | |
| TTCACCACACAACCGTTCTT+AGG | - | chr2.2:36638827-36638846 | None:intergenic | 45.0% | |
| TTCAGAGGCTGTTGAAGAGA+CGG | + | chr2.2:36638976-36638995 | MS.gene69867:CDS | 45.0% | |
| ! | ATGTCCATATGTCTAGGGCA+AGG | + | chr2.2:36639086-36639105 | MS.gene69867:CDS | 45.0% |
| ! | GTTACAAGTGAAGAAGCGCA+AGG | + | chr2.2:36638998-36639017 | MS.gene69867:CDS | 45.0% |
| ! | TATCATGGCGTTGGAGATCT+CGG | + | chr2.2:36638124-36638143 | MS.gene69867:CDS | 45.0% |
| ! | TCAGAAGGCACGTCAAAACA+TGG | - | chr2.2:36638230-36638249 | None:intergenic | 45.0% |
| !! | AAGCTTTGTTGAAGAGAGCG+AGG | + | chr2.2:36638027-36638046 | MS.gene69867:CDS | 45.0% |
| !! | GAATTGAAGTGGGCTGAAAC+AGG | + | chr2.2:36638692-36638711 | MS.gene69867:CDS | 45.0% |
| !! | TGATCGTCCTCAGCCTTATT+TGG | - | chr2.2:36638374-36638393 | None:intergenic | 45.0% |
| ACAAGAACTGCTCCTAGGCT+TGG | - | chr2.2:36638623-36638642 | None:intergenic | 50.0% | |
| AGATGAAACTGCTGCGTTGG+CGG | + | chr2.2:36639489-36639508 | MS.gene69867:CDS | 50.0% | |
| AGCGCAAGGCCTATTTGACA+TGG | + | chr2.2:36639012-36639031 | MS.gene69867:CDS | 50.0% | |
| CAAGAACTGCTCCTAGGCTT+GGG | - | chr2.2:36638622-36638641 | None:intergenic | 50.0% | |
| CAAGGCCTATTTGACATGGC+CGG | + | chr2.2:36639016-36639035 | MS.gene69867:CDS | 50.0% | |
| CATCTCTTGGAACTTGCCTC+CGG | - | chr2.2:36639038-36639057 | None:intergenic | 50.0% | |
| CATGGTTCGACATAATCCGG+AGG | - | chr2.2:36638212-36638231 | None:intergenic | 50.0% | |
| CTCAGTGAAACCTCCACTAC+CGG | + | chr2.2:36639436-36639455 | MS.gene69867:CDS | 50.0% | |
| GCTGCGTGCTATATGCAGAT+GGG | + | chr2.2:36637936-36637955 | MS.gene69867:CDS | 50.0% | |
| TCAGTGAAACCTCCACTACC+GGG | + | chr2.2:36639437-36639456 | MS.gene69867:CDS | 50.0% | |
| TGCTCCTAAGAACGGTTGTG+TGG | + | chr2.2:36638820-36638839 | MS.gene69867:CDS | 50.0% | |
| TGGGCTGAAACAGGATCACA+GGG | + | chr2.2:36638701-36638720 | MS.gene69867:CDS | 50.0% | |
| TTCCTTCAACTCTTGAGCCG+TGG | - | chr2.2:36637799-36637818 | None:intergenic | 50.0% | |
| ! | GAAGAGAGCGAGGTGTTATG+AGG | + | chr2.2:36638037-36638056 | MS.gene69867:CDS | 50.0% |
| GAGGGATCTTCGAGGAGCTA+TGG | + | chr2.2:36637842-36637861 | MS.gene69867:CDS | 55.0% | |
| GGCTGCGTGCTATATGCAGA+TGG | + | chr2.2:36637935-36637954 | MS.gene69867:CDS | 55.0% | |
| TAACCCATCCAACCCGGTAG+TGG | - | chr2.2:36639452-36639471 | None:intergenic | 55.0% | |
| TGAAACCTCCACTACCGGGT+TGG | + | chr2.2:36639441-36639460 | MS.gene69867:CDS | 55.0% | |
| TGCCACGGCTCAAGAGTTGA+AGG | + | chr2.2:36637794-36637813 | MS.gene69867:CDS | 55.0% | |
| TGCCTCCGGCCATGTCAAAT+AGG | - | chr2.2:36639024-36639043 | None:intergenic | 55.0% | |
| TGTGACAGGTTCCCAAGCCT+AGG | + | chr2.2:36638608-36638627 | MS.gene69867:CDS | 55.0% | |
| ! | GGCGTTGGAGATCTCGGATA+AGG | + | chr2.2:36638130-36638149 | MS.gene69867:CDS | 55.0% |
| ! | GTGGGCTGAAACAGGATCAC+AGG | + | chr2.2:36638700-36638719 | MS.gene69867:CDS | 55.0% |
| !! | GGGACTTGGTGAGTACCCTA+GGG | + | chr2.2:36637956-36637975 | MS.gene69867:CDS | 55.0% |
| !! | TGGGACTTGGTGAGTACCCT+AGG | + | chr2.2:36637955-36637974 | MS.gene69867:CDS | 55.0% |
| ACCTCTGTGGAGGGCCATGT+CGG | - | chr2.2:36639340-36639359 | None:intergenic | 60.0% | |
| GGCCTATTTGACATGGCCGG+AGG | + | chr2.2:36639019-36639038 | MS.gene69867:CDS | 60.0% | |
| ! | ACCTCCACTACCGGGTTGGA+TGG | + | chr2.2:36639445-36639464 | MS.gene69867:CDS | 60.0% |
| ! | CCTCCACTACCGGGTTGGAT+GGG | + | chr2.2:36639446-36639465 | MS.gene69867:CDS | 60.0% |
| ! | CTGCGTTGGCGGCAAACATG+AGG | + | chr2.2:36639500-36639519 | MS.gene69867:CDS | 60.0% |
| ACCGACATGGCCCTCCACAG+AGG | + | chr2.2:36639336-36639355 | MS.gene69867:CDS | 65.0% | |
| ! | CCCATCCAACCCGGTAGTGG+AGG | - | chr2.2:36639449-36639468 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 36637684 | 36639935 | 36637684 | ID=MS.gene69867 |
| chr2.2 | mRNA | 36637684 | 36639935 | 36637684 | ID=MS.gene69867.t1;Parent=MS.gene69867 |
| chr2.2 | exon | 36637684 | 36639709 | 36637684 | ID=MS.gene69867.t1.exon1;Parent=MS.gene69867.t1 |
| chr2.2 | CDS | 36637684 | 36639709 | 36637684 | ID=cds.MS.gene69867.t1;Parent=MS.gene69867.t1 |
| chr2.2 | exon | 36639787 | 36639935 | 36639787 | ID=MS.gene69867.t1.exon2;Parent=MS.gene69867.t1 |
| chr2.2 | CDS | 36639787 | 36639935 | 36639787 | ID=cds.MS.gene69867.t1;Parent=MS.gene69867.t1 |
| Gene Sequence |
| Protein sequence |
