Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84397.t1 | RDX75728.1 | 86 | 449 | 63 | 0 | 9 | 457 | 116 | 564 | 1.00E-234 | 822.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84397.t1 | Q8H1Z0 | 69.7 | 455 | 135 | 2 | 6 | 457 | 122 | 576 | 4.8e-188 | 658.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84397.t1 | A0A371FBR1 | 86.0 | 449 | 63 | 0 | 9 | 457 | 116 | 564 | 7.5e-235 | 822.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene84397 | 0.824112 | 9.63E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene84397 | 0.835339 | 1.78E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene84397 | 0.866625 | 2.49E-65 | -1.69E-46 |
| MS.gene049609 | MS.gene84397 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene049907 | MS.gene84397 | 0.805332 | 1.40E-49 | -1.69E-46 |
| MS.gene050122 | MS.gene84397 | 0.833093 | 6.50E-56 | -1.69E-46 |
| MS.gene050380 | MS.gene84397 | -0.828932 | 6.83E-55 | -1.69E-46 |
| MS.gene050499 | MS.gene84397 | 0.857896 | 1.19E-62 | -1.69E-46 |
| MS.gene050502 | MS.gene84397 | 0.837769 | 4.27E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene84397 | 0.836982 | 6.80E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene84397 | 0.807072 | 6.04E-50 | -1.69E-46 |
| MS.gene050662 | MS.gene84397 | 0.825991 | 3.46E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene84397 | 0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene050686 | MS.gene84397 | 0.834148 | 3.54E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene84397 | 0.819412 | 1.18E-52 | -1.69E-46 |
| MS.gene050971 | MS.gene84397 | 0.807838 | 4.16E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene84397 | 0.835524 | 1.60E-56 | -1.69E-46 |
| MS.gene051255 | MS.gene84397 | 0.826948 | 2.05E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene84397 | 0.807877 | 4.08E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene84397 | 0.83569 | 1.45E-56 | -1.69E-46 |
| MS.gene051874 | MS.gene84397 | 0.838217 | 3.28E-57 | -1.69E-46 |
| MS.gene051941 | MS.gene84397 | 0.809436 | 1.89E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene84397 | 0.829197 | 5.89E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene84397 | 0.815208 | 1.04E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene84397 | 0.810078 | 1.38E-50 | -1.69E-46 |
| MS.gene052999 | MS.gene84397 | 0.86846 | 6.42E-66 | -1.69E-46 |
| MS.gene053018 | MS.gene84397 | 0.829376 | 5.33E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene84397 | 0.815813 | 7.63E-52 | -1.69E-46 |
| MS.gene05335 | MS.gene84397 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene84397 | 0.846786 | 1.75E-59 | -1.69E-46 |
| MS.gene053505 | MS.gene84397 | 0.847659 | 1.01E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene84397 | 0.82735 | 1.64E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene84397 | 0.819954 | 8.86E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene84397 | 0.880182 | 6.77E-70 | -1.69E-46 |
| MS.gene053912 | MS.gene84397 | 0.83157 | 1.55E-55 | -1.69E-46 |
| MS.gene054010 | MS.gene84397 | 0.809813 | 1.57E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene84397 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene84397 | 0.808512 | 2.99E-50 | -1.69E-46 |
| MS.gene054486 | MS.gene84397 | 0.843498 | 1.35E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene84397 | 0.822811 | 1.94E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene84397 | 0.81595 | 7.11E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene84397 | 0.830404 | 2.99E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene84397 | 0.831125 | 1.99E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene84397 | 0.875355 | 3.29E-68 | -1.69E-46 |
| MS.gene055911 | MS.gene84397 | 0.881948 | 1.57E-70 | -1.69E-46 |
| MS.gene05601 | MS.gene84397 | 0.818697 | 1.71E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene84397 | 0.822805 | 1.95E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene84397 | 0.827239 | 1.75E-54 | -1.69E-46 |
| MS.gene056346 | MS.gene84397 | 0.809151 | 2.18E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene84397 | 0.878291 | 3.16E-69 | -1.69E-46 |
| MS.gene056448 | MS.gene84397 | 0.831951 | 1.25E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene84397 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene056833 | MS.gene84397 | 0.816351 | 5.78E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene84397 | 0.838136 | 3.44E-57 | -1.69E-46 |
| MS.gene057019 | MS.gene84397 | 0.814649 | 1.38E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene84397 | 0.834284 | 3.28E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene84397 | 0.821896 | 3.16E-53 | -1.69E-46 |
| MS.gene057289 | MS.gene84397 | 0.813554 | 2.41E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene84397 | 0.820923 | 5.31E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene84397 | 0.824383 | 8.32E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene84397 | 0.832181 | 1.09E-55 | -1.69E-46 |
| MS.gene058075 | MS.gene84397 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene058459 | MS.gene84397 | 0.820111 | 8.15E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene84397 | 0.803926 | 2.76E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene84397 | 0.854183 | 1.46E-61 | -1.69E-46 |
| MS.gene059129 | MS.gene84397 | 0.802003 | 6.90E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene84397 | 0.820237 | 7.63E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene84397 | 0.815393 | 9.46E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene84397 | 0.835327 | 1.79E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene84397 | 0.861485 | 9.93E-64 | -1.69E-46 |
| MS.gene059402 | MS.gene84397 | -0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene84397 | 0.805365 | 1.38E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene84397 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene059517 | MS.gene84397 | 0.832778 | 7.78E-56 | -1.69E-46 |
| MS.gene059674 | MS.gene84397 | 0.85341 | 2.43E-61 | -1.69E-46 |
| MS.gene059680 | MS.gene84397 | 0.84022 | 9.91E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene84397 | 0.861837 | 7.75E-64 | -1.69E-46 |
| MS.gene059807 | MS.gene84397 | 0.834805 | 2.42E-56 | -1.69E-46 |
| MS.gene059974 | MS.gene84397 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene060372 | MS.gene84397 | 0.867306 | 1.51E-65 | -1.69E-46 |
| MS.gene060401 | MS.gene84397 | 0.808071 | 3.71E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene84397 | 0.83945 | 1.57E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene84397 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene84397 | 0.83016 | 3.43E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene84397 | 0.874953 | 4.51E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84397.t1 | MTR_4g129630 | 79.075 | 454 | 93 | 1 | 6 | 457 | 120 | 573 | 0.0 | 775 |
| MS.gene84397.t1 | MTR_8g009590 | 37.086 | 453 | 277 | 4 | 6 | 457 | 157 | 602 | 2.28e-94 | 298 |
| MS.gene84397.t1 | MTR_8g009560 | 33.407 | 452 | 294 | 3 | 6 | 457 | 121 | 565 | 1.31e-81 | 264 |
| MS.gene84397.t1 | MTR_7g090100 | 33.775 | 453 | 286 | 4 | 7 | 457 | 119 | 559 | 4.44e-78 | 254 |
| MS.gene84397.t1 | MTR_7g090120 | 33.407 | 455 | 287 | 4 | 7 | 457 | 119 | 561 | 2.40e-77 | 253 |
| MS.gene84397.t1 | MTR_4g054290 | 34.071 | 452 | 288 | 4 | 7 | 457 | 119 | 561 | 1.44e-76 | 251 |
| MS.gene84397.t1 | MTR_7g090140 | 33.703 | 451 | 290 | 3 | 7 | 457 | 24 | 465 | 1.67e-76 | 248 |
| MS.gene84397.t1 | MTR_7g090140 | 33.703 | 451 | 290 | 3 | 7 | 457 | 119 | 560 | 2.34e-75 | 248 |
| MS.gene84397.t1 | MTR_4g054150 | 31.264 | 451 | 281 | 4 | 7 | 457 | 119 | 540 | 3.69e-70 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84397.t1 | AT5G57800 | 69.670 | 455 | 135 | 2 | 6 | 457 | 122 | 576 | 0.0 | 668 |
| MS.gene84397.t1 | AT1G02205 | 36.947 | 452 | 279 | 4 | 7 | 457 | 123 | 569 | 3.65e-95 | 300 |
| MS.gene84397.t1 | AT1G02205 | 36.947 | 452 | 279 | 4 | 7 | 457 | 122 | 568 | 4.51e-95 | 300 |
| MS.gene84397.t1 | AT1G02205 | 36.404 | 456 | 281 | 4 | 7 | 457 | 122 | 573 | 1.06e-93 | 296 |
| MS.gene84397.t1 | AT1G02205 | 36.294 | 394 | 245 | 4 | 65 | 457 | 16 | 404 | 1.62e-85 | 270 |
| MS.gene84397.t1 | AT2G37700 | 33.850 | 452 | 291 | 4 | 7 | 457 | 118 | 562 | 1.10e-80 | 262 |
| MS.gene84397.t1 | AT1G02190 | 35.065 | 462 | 276 | 7 | 7 | 457 | 122 | 570 | 4.69e-80 | 260 |
| MS.gene84397.t1 | AT2G37700 | 33.628 | 452 | 283 | 4 | 7 | 457 | 118 | 553 | 1.07e-79 | 259 |
| MS.gene84397.t1 | AT1G02190 | 34.848 | 462 | 273 | 8 | 7 | 457 | 122 | 566 | 3.14e-78 | 255 |
| MS.gene84397.t1 | AT2G37700 | 35.955 | 356 | 226 | 2 | 7 | 361 | 118 | 472 | 2.55e-69 | 229 |
| MS.gene84397.t1 | AT1G02205 | 35.780 | 327 | 204 | 4 | 132 | 457 | 8 | 329 | 1.24e-65 | 216 |
| MS.gene84397.t1 | AT2G37700 | 30.973 | 452 | 267 | 5 | 7 | 457 | 118 | 525 | 3.52e-63 | 214 |
Find 108 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCCTAGGTGTGGCTTTC+AGG | 0.088000 | 2.3:+38649787 | MS.gene84397:CDS |
| TCTCAGAACCACTTTATTAT+TGG | 0.179518 | 2.3:+38646729 | MS.gene84397:CDS |
| CTGTTTCTGTCGTTAGTAAT+TGG | 0.197549 | 2.3:+38647134 | MS.gene84397:CDS |
| TCACTCCAAGAGAGCAAAAT+TGG | 0.214120 | 2.3:+38652327 | MS.gene84397:CDS |
| TTTAGAAGAGATTGCACTTA+TGG | 0.262243 | 2.3:+38652401 | MS.gene84397:CDS |
| AAAACTTCTTTGGCATCTTT+AGG | 0.262452 | 2.3:-38651601 | None:intergenic |
| CTCAGAACCACTTTATTATT+GGG | 0.270378 | 2.3:+38646730 | MS.gene84397:CDS |
| CAGCTTGGCTGCTTTGAATA+AGG | 0.272905 | 2.3:+38650073 | MS.gene84397:CDS |
| ATGCAGAATGAATCTCTAAA+TGG | 0.279050 | 2.3:+38651484 | MS.gene84397:intron |
| CATGAACAACTCGAACTCTT+AGG | 0.279627 | 2.3:-38651540 | None:intergenic |
| CCCGGTAAGGAAAACTTCTT+TGG | 0.281737 | 2.3:-38651611 | None:intergenic |
| TATATGATATATCTCATAAA+TGG | 0.286536 | 2.3:-38647296 | None:intergenic |
| AGCGGGAACCGGTACGGTTT+TGG | 0.292315 | 2.3:+38647106 | MS.gene84397:intron |
| AGGATGTGATATCCACTATA+TGG | 0.314664 | 2.3:-38649589 | None:intergenic |
| ATTCTCACCGCTGATAAAAT+TGG | 0.319998 | 2.3:+38650038 | MS.gene84397:CDS |
| AAGATAACTTTGGTATTCTT+CGG | 0.331311 | 2.3:-38652243 | None:intergenic |
| GGAGCTTCATTGATGGGATA+TGG | 0.335334 | 2.3:+38647170 | MS.gene84397:CDS |
| CTTTGTTAGCAATGTGGCTT+TGG | 0.345554 | 2.3:+38649705 | MS.gene84397:CDS |
| CTAAGAGTTCGAGTTGTTCA+TGG | 0.362503 | 2.3:+38651541 | MS.gene84397:CDS |
| AGATAACTTTGGTATTCTTC+GGG | 0.364479 | 2.3:-38652242 | None:intergenic |
| TTTAACTGCAGCTGTGATCT+TGG | 0.367863 | 2.3:+38651570 | MS.gene84397:CDS |
| CATGGCCATGGGAGAACTTT+GGG | 0.369137 | 2.3:+38645941 | None:intergenic |
| GGATCAACAAGTATGATATA+TGG | 0.369981 | 2.3:+38647191 | MS.gene84397:CDS |
| TGGGTGCATAAGAAGTTTCA+TGG | 0.372705 | 2.3:+38646749 | MS.gene84397:CDS |
| CCCGTTACTGACTGTGGTAC+TGG | 0.377406 | 2.3:-38646815 | None:intergenic |
| CCAAAAGAAAGTCAAAATTC+TGG | 0.380050 | 2.3:+38651675 | MS.gene84397:CDS |
| AAATTGGAGGAACAACAAAT+TGG | 0.393279 | 2.3:-38652373 | None:intergenic |
| ACAACTCGAACTCTTAGGTT+TGG | 0.396990 | 2.3:-38651535 | None:intergenic |
| TTTGTGTAATTCCCATGATT+TGG | 0.405516 | 2.3:-38647533 | None:intergenic |
| CAACTCGAACTCTTAGGTTT+GGG | 0.405560 | 2.3:-38651534 | None:intergenic |
| CGAATGCAGGAAATTGTAGT+AGG | 0.411595 | 2.3:+38649543 | MS.gene84397:intron |
| CCAAGGCCTTCCACATCATC+TGG | 0.420649 | 2.3:-38652446 | None:intergenic |
| TGCAGAATGAATCTCTAAAT+GGG | 0.425144 | 2.3:+38651485 | MS.gene84397:intron |
| TTACACAAATCATTCAGTTC+AGG | 0.431698 | 2.3:+38647547 | MS.gene84397:CDS |
| TCATGGCCATGGGAGAACTT+TGG | 0.442180 | 2.3:+38645940 | None:intergenic |
| ATGGTGAAGTGAATGGTATT+TGG | 0.447963 | 2.3:-38646786 | None:intergenic |
| TGGGCCAGGAAAACAAATTC+CGG | 0.457449 | 2.3:-38649569 | None:intergenic |
| CAATTACTAACGACAGAAAC+AGG | 0.460695 | 2.3:-38647133 | None:intergenic |
| CCAGATGATGTGGAAGGCCT+TGG | 0.468693 | 2.3:+38652446 | MS.gene84397:CDS |
| ACCGGGGCAACTTCTAAGCT+TGG | 0.468879 | 2.3:+38651628 | MS.gene84397:CDS |
| CATTGCAAGACATGGATTGT+TGG | 0.469406 | 2.3:+38652296 | MS.gene84397:CDS |
| CACTCCAAGAGAGCAAAATT+GGG | 0.470494 | 2.3:+38652328 | MS.gene84397:CDS |
| TGACTTGAACAAGATAACTT+TGG | 0.472839 | 2.3:-38652253 | None:intergenic |
| TCTTGCAATGCTGTGCTGCT+TGG | 0.479530 | 2.3:-38652283 | None:intergenic |
| CCAGTACCACAGTCAGTAAC+GGG | 0.482696 | 2.3:+38646815 | MS.gene84397:CDS |
| AACAAAGCTACCACGGCCAT+TGG | 0.484099 | 2.3:-38649689 | None:intergenic |
| GGAGAACTTTGGGATATTCA+AGG | 0.485944 | 2.3:+38645951 | MS.gene84397:CDS |
| GATCCTAGGAGCTTCATTGA+TGG | 0.486137 | 2.3:+38647163 | MS.gene84397:CDS |
| CTTCTCTACCATTCAGAACA+AGG | 0.486214 | 2.3:+38649645 | MS.gene84397:CDS |
| ATACGCTTAACACCAAATCA+TGG | 0.492047 | 2.3:+38647521 | MS.gene84397:CDS |
| TAGATTTCAGAAGATTCAAA+AGG | 0.494537 | 2.3:+38652214 | MS.gene84397:CDS |
| GTAATTGGAATTCCGATCCT+AGG | 0.495287 | 2.3:+38647149 | MS.gene84397:CDS |
| TTATGCACCCAATAATAAAG+TGG | 0.504285 | 2.3:-38646737 | None:intergenic |
| CGTCAAAGAGAGGCATGAAA+AGG | 0.504893 | 2.3:-38647489 | None:intergenic |
| CACTCTACACCACACTGAAA+AGG | 0.505016 | 2.3:+38647453 | MS.gene84397:CDS |
| GCTTAGAAGTTGCCCCGGTA+AGG | 0.510441 | 2.3:-38651624 | None:intergenic |
| GGATGTGATATCCACTATAT+GGG | 0.514968 | 2.3:-38649588 | None:intergenic |
| TTGATACCCTCAGTAGCAAA+TGG | 0.517753 | 2.3:-38649996 | None:intergenic |
| CATTGCAATGGCCCAAACTT+CGG | 0.518364 | 2.3:-38647238 | None:intergenic |
| AAGAAGAACCTTGTTCTGAA+TGG | 0.526189 | 2.3:-38649653 | None:intergenic |
| ATCAAACATGGGTTGTCCCT+AGG | 0.531029 | 2.3:+38649774 | MS.gene84397:CDS |
| ATGCCTCTCTTTGACGCACT+AGG | 0.531967 | 2.3:+38647496 | MS.gene84397:CDS |
| TGATATCCACTATATGGGCC+AGG | 0.532609 | 2.3:-38649583 | None:intergenic |
| TTGGAGGAACAACAAATTGG+TGG | 0.540504 | 2.3:-38652370 | None:intergenic |
| GTTTGCAGCGGGAACCGGTA+CGG | 0.540915 | 2.3:+38647100 | MS.gene84397:intron |
| CTCCTTTATCATCATGGCCA+TGG | 0.541676 | 2.3:+38645929 | None:intergenic |
| CAGCACAGCATTGCAAGACA+TGG | 0.541786 | 2.3:+38652288 | MS.gene84397:CDS |
| AGGAAATTGTAGTAGGGTAC+CGG | 0.549906 | 2.3:+38649550 | MS.gene84397:intron |
| TACGCTTAACACCAAATCAT+GGG | 0.553993 | 2.3:+38647522 | MS.gene84397:CDS |
| TCCTTTATCATCATGGCCAT+GGG | 0.554011 | 2.3:+38645930 | None:intergenic |
| ATCCTAGGAGCTTCATTGAT+GGG | 0.558457 | 2.3:+38647164 | MS.gene84397:CDS |
| ATCCCATCAATGAAGCTCCT+AGG | 0.559782 | 2.3:-38647166 | None:intergenic |
| ATCAATGAAGCTCCTAGGAT+CGG | 0.561148 | 2.3:-38647161 | None:intergenic |
| CACTTACCCGTTACTGACTG+TGG | 0.562180 | 2.3:-38646821 | None:intergenic |
| TCCAGTACCACAGTCAGTAA+CGG | 0.563885 | 2.3:+38646814 | MS.gene84397:CDS |
| ACATGGGTTGTCCCTAGGTG+TGG | 0.573384 | 2.3:+38649779 | MS.gene84397:CDS |
| GCAGATGTTAACACTATCAA+CGG | 0.576554 | 2.3:+38652190 | MS.gene84397:intron |
| TCCAAGCTTAGAAGTTGCCC+CGG | 0.577620 | 2.3:-38651629 | None:intergenic |
| TCTGAATGGTAGAGAAGCAA+AGG | 0.579037 | 2.3:-38649639 | None:intergenic |
| GAACAATTTCAACATTGCAA+TGG | 0.582710 | 2.3:-38647250 | None:intergenic |
| ACAGAATTGAGCATGCATAG+AGG | 0.586263 | 2.3:-38649609 | None:intergenic |
| TGATCACCTCACAGCAGCCA+AGG | 0.590974 | 2.3:-38652463 | None:intergenic |
| CAGGTGCTCCAAAACCGTAC+CGG | 0.593469 | 2.3:-38647114 | None:intergenic |
| GGGGTAGACTACATCAAACA+TGG | 0.605971 | 2.3:+38649762 | MS.gene84397:CDS |
| TTTCCTAGTGCGTCAAAGAG+AGG | 0.607939 | 2.3:-38647499 | None:intergenic |
| TGCAGCTATGATGTTTCATG+TGG | 0.608012 | 2.3:+38646703 | MS.gene84397:CDS |
| GAATGCAGGAAATTGTAGTA+GGG | 0.620480 | 2.3:+38649544 | MS.gene84397:intron |
| GCAGAATGAATCTCTAAATG+GGG | 0.622181 | 2.3:+38651486 | MS.gene84397:intron |
| AATATCCCAAAGTTCTCCCA+TGG | 0.622512 | 2.3:-38645946 | None:intergenic |
| AGACATGGATTGTTGGCAAG+TGG | 0.625631 | 2.3:+38652303 | MS.gene84397:CDS |
| CCACCTGAAAGCCACACCTA+GGG | 0.627760 | 2.3:-38649790 | None:intergenic |
| TGGTGTTAAAGTCATCAGCT+TGG | 0.628526 | 2.3:+38650058 | MS.gene84397:CDS |
| CCCACCTGAAAGCCACACCT+AGG | 0.636360 | 2.3:-38649791 | None:intergenic |
| TGGTAGCTTTGTTAGCAATG+TGG | 0.637602 | 2.3:+38649699 | MS.gene84397:CDS |
| TATGCGATTGCCAGATGATG+TGG | 0.638042 | 2.3:+38652436 | MS.gene84397:CDS |
| GAATTGAATGGTGAAGTGAA+TGG | 0.638759 | 2.3:-38646793 | None:intergenic |
| CATTGCTAACAAAGCTACCA+CGG | 0.641412 | 2.3:-38649696 | None:intergenic |
| GGAAGGCCTTGGCTGCTGTG+AGG | 0.644130 | 2.3:+38652457 | MS.gene84397:CDS |
| TTTCAGTGTGGTGTAGAGTG+TGG | 0.670438 | 2.3:-38647450 | None:intergenic |
| CAGAATGAATCTCTAAATGG+GGG | 0.673905 | 2.3:+38651487 | MS.gene84397:intron |
| ACTGTGGTACTGGAATTGAA+TGG | 0.684367 | 2.3:-38646805 | None:intergenic |
| GAGCAAAATTGGGCTCCACG+TGG | 0.686831 | 2.3:+38652338 | MS.gene84397:CDS |
| AATGTTTGAAACAGACGATG+TGG | 0.700838 | 2.3:-38647272 | None:intergenic |
| GGGTAGACTACATCAAACAT+GGG | 0.706763 | 2.3:+38649763 | MS.gene84397:CDS |
| GCAGCTATGATGTTTCATGT+GGG | 0.713734 | 2.3:+38646704 | MS.gene84397:CDS |
| CGATTGCCAGATGATGTGGA+AGG | 0.713769 | 2.3:+38652440 | MS.gene84397:CDS |
| TTTGATGTAGTCTACCCCTG+AGG | 0.752279 | 2.3:-38649757 | None:intergenic |
| TGGTGGAAATGAGTTCCACG+TGG | 0.765678 | 2.3:-38652353 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATAAAATAATTTTTTA+TGG | + | chr2.3:38650478-38650497 | MS.gene84397:intron | 0.0% |
| !! | AAAAAATTATATAATATACC+TGG | - | chr2.3:38650410-38650429 | None:intergenic | 10.0% |
| !! | AATTAATGTTCAATTTATAA+AGG | - | chr2.3:38650586-38650605 | None:intergenic | 10.0% |
| !! | AGTATAAATTATAAATCATA+GGG | + | chr2.3:38648196-38648215 | MS.gene84397:intron | 10.0% |
| !! | ATTAGTAATTATTAAATTTG+TGG | + | chr2.3:38649500-38649519 | MS.gene84397:intron | 10.0% |
| !! | GTACAATTTAAAAATTTATT+TGG | - | chr2.3:38651270-38651289 | None:intergenic | 10.0% |
| !! | TAGAAATTATTAGAAAAAAA+TGG | + | chr2.3:38648900-38648919 | MS.gene84397:intron | 10.0% |
| !!! | AATCAAAAAAAATATTTTAC+AGG | - | chr2.3:38647661-38647680 | None:intergenic | 10.0% |
| !!! | ATCAAAAAAAATATTTTACA+GGG | - | chr2.3:38647660-38647679 | None:intergenic | 10.0% |
| !!! | ATTTATTTTATTTCAACTAA+AGG | + | chr2.3:38647336-38647355 | MS.gene84397:intron | 10.0% |
| !!! | TGAAAAAAATATATTTTACA+GGG | + | chr2.3:38647789-38647808 | MS.gene84397:intron | 10.0% |
| !!! | TTTTAATATTTTTAGAAGTT+TGG | - | chr2.3:38647974-38647993 | None:intergenic | 10.0% |
| !! | AAAATAAATTAACTTACGTT+GGG | - | chr2.3:38647325-38647344 | None:intergenic | 15.0% |
| !! | AAAATGAAAAAAAATACTTC+TGG | - | chr2.3:38648158-38648177 | None:intergenic | 15.0% |
| !! | AAAGGATAAAAAGAAAATTA+AGG | + | chr2.3:38648799-38648818 | MS.gene84397:intron | 15.0% |
| !! | ATGTAAATAGCTATAAATAA+AGG | + | chr2.3:38650970-38650989 | MS.gene84397:intron | 15.0% |
| !! | ATTGTAGTAACTAAATATAT+TGG | + | chr2.3:38648110-38648129 | MS.gene84397:intron | 15.0% |
| !! | CTTATTATGAAAAATACAAT+AGG | - | chr2.3:38649455-38649474 | None:intergenic | 15.0% |
| !! | GAGTATAAATTATAAATCAT+AGG | + | chr2.3:38648195-38648214 | MS.gene84397:intron | 15.0% |
| !! | GTATAAATTATAAATCATAG+GGG | + | chr2.3:38648197-38648216 | MS.gene84397:intron | 15.0% |
| !! | TAAAATAAATTAACTTACGT+TGG | - | chr2.3:38647326-38647345 | None:intergenic | 15.0% |
| !! | TATATGATATATCTCATAAA+TGG | - | chr2.3:38647299-38647318 | None:intergenic | 15.0% |
| !! | TTTAATTCTTCAAACAATAT+TGG | + | chr2.3:38646613-38646632 | MS.gene84397:intron | 15.0% |
| !!! | AAAAAAATATATTTTACAGG+GGG | + | chr2.3:38647791-38647810 | MS.gene84397:intron | 15.0% |
| !!! | AAAAAACAAATTTTTACAGA+GGG | + | chr2.3:38647820-38647839 | MS.gene84397:intron | 15.0% |
| !!! | AAATCAAATGTGTTATTTTA+TGG | + | chr2.3:38649161-38649180 | MS.gene84397:intron | 15.0% |
| !!! | AATACATTTAATTTTACTGA+GGG | + | chr2.3:38648410-38648429 | MS.gene84397:intron | 15.0% |
| !!! | ATTTAGTAATTAGTTCTATA+TGG | - | chr2.3:38651993-38652012 | None:intergenic | 15.0% |
| !!! | ATTTTTCTAATTTAGATGAA+AGG | + | chr2.3:38648941-38648960 | MS.gene84397:intron | 15.0% |
| !!! | CGTTATATTTACTTTTTTTA+AGG | + | chr2.3:38649014-38649033 | MS.gene84397:intron | 15.0% |
| !!! | CTATTGTATTTTTCATAATA+AGG | + | chr2.3:38649453-38649472 | MS.gene84397:intron | 15.0% |
| !!! | CTGAAAAAAATATATTTTAC+AGG | + | chr2.3:38647788-38647807 | MS.gene84397:intron | 15.0% |
| !!! | GAAAAAAATATATTTTACAG+GGG | + | chr2.3:38647790-38647809 | MS.gene84397:intron | 15.0% |
| !!! | TAATTTTCTTTTTATCCTTT+CGG | - | chr2.3:38648799-38648818 | None:intergenic | 15.0% |
| !!! | TCAAAAAAAATATTTTACAG+GGG | - | chr2.3:38647659-38647678 | None:intergenic | 15.0% |
| !!! | TGAATTTTTGAAATATTGTT+TGG | + | chr2.3:38649187-38649206 | MS.gene84397:intron | 15.0% |
| !!! | TTGGTCATATAATTAATTTT+TGG | + | chr2.3:38648331-38648350 | MS.gene84397:intron | 15.0% |
| !!! | TTTAAGAAATTCTTTTAACA+GGG | + | chr2.3:38649918-38649937 | MS.gene84397:intron | 15.0% |
| !!! | TTTTAAGAAATTCTTTTAAC+AGG | + | chr2.3:38649917-38649936 | MS.gene84397:intron | 15.0% |
| !!! | TTTTCAATTCATATGATAAA+TGG | - | chr2.3:38651032-38651051 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGCTTTTCTAATT+TGG | + | chr2.3:38646563-38646582 | MS.gene84397:intron | 15.0% |
| !! | AAATAAATTAACTTACGTTG+GGG | - | chr2.3:38647324-38647343 | None:intergenic | 20.0% |
| !! | AGATCTAAACATATGTTTAT+AGG | + | chr2.3:38651790-38651809 | MS.gene84397:intron | 20.0% |
| !! | AGTAGTAGAAAAAATAGAAT+AGG | - | chr2.3:38646534-38646553 | None:intergenic | 20.0% |
| !! | AGTCAACAAAATATTTAAAG+TGG | - | chr2.3:38648557-38648576 | None:intergenic | 20.0% |
| !! | ATACATTGTGATTATAGAAA+GGG | + | chr2.3:38650728-38650747 | MS.gene84397:intron | 20.0% |
| !! | ATTATATAATATACCTGGAT+TGG | - | chr2.3:38650405-38650424 | None:intergenic | 20.0% |
| !! | CAATTTAGAAATAAATCCAT+GGG | - | chr2.3:38648828-38648847 | None:intergenic | 20.0% |
| !! | CCTAAAGAAAAAAAAAAGAA+GGG | + | chr2.3:38649847-38649866 | MS.gene84397:intron | 20.0% |
| !! | CTAAAGAAAAAAAAAAGAAG+GGG | + | chr2.3:38649848-38649867 | MS.gene84397:intron | 20.0% |
| !! | CTCAGTAAAATTAAATGTAT+TGG | - | chr2.3:38648411-38648430 | None:intergenic | 20.0% |
| !! | GTAGTAAAAAGAAACTAAAA+AGG | - | chr2.3:38649738-38649757 | None:intergenic | 20.0% |
| !! | GTTCAATTTATAAAGGTAAT+TGG | - | chr2.3:38650579-38650598 | None:intergenic | 20.0% |
| !! | TAAAAAAGTCATAGTTAGTA+GGG | + | chr2.3:38647588-38647607 | MS.gene84397:intron | 20.0% |
| !! | TAAAGAAAAAAAAAAGAAGG+GGG | + | chr2.3:38649849-38649868 | MS.gene84397:intron | 20.0% |
| !! | TGTAAAATCATGCTATAATT+AGG | - | chr2.3:38648526-38648545 | None:intergenic | 20.0% |
| !! | TTAAAAAAGTCATAGTTAGT+AGG | + | chr2.3:38647587-38647606 | MS.gene84397:intron | 20.0% |
| !! | TTACTAATAAATATGAAGCA+CGG | - | chr2.3:38647071-38647090 | None:intergenic | 20.0% |
| !! | TTTGTCTGATATTACTAAAA+TGG | + | chr2.3:38651100-38651119 | MS.gene84397:intron | 20.0% |
| !!! | AATTTTCTTTTTATCCTTTC+GGG | - | chr2.3:38648798-38648817 | None:intergenic | 20.0% |
| !!! | ACTTTTATACTTTATGTTTG+AGG | + | chr2.3:38650121-38650140 | MS.gene84397:intron | 20.0% |
| !!! | ATATTGATTTTGTTCATATG+TGG | + | chr2.3:38651459-38651478 | MS.gene84397:intron | 20.0% |
| !!! | CAAAAAAAATATTTTACAGG+GGG | - | chr2.3:38647658-38647677 | None:intergenic | 20.0% |
| !!! | CAAAAAACAAATTTTTACAG+AGG | + | chr2.3:38647819-38647838 | MS.gene84397:intron | 20.0% |
| !!! | CAAAAATTTTGGTTTTTGTA+TGG | - | chr2.3:38647719-38647738 | None:intergenic | 20.0% |
| !!! | CAATACATTTAATTTTACTG+AGG | + | chr2.3:38648409-38648428 | MS.gene84397:intron | 20.0% |
| !!! | CTGAATTTTTTTTTTACAGA+GGG | - | chr2.3:38647686-38647705 | None:intergenic | 20.0% |
| !!! | GTCAACAAAATATTTAAAGT+GGG | - | chr2.3:38648556-38648575 | None:intergenic | 20.0% |
| !!! | GTGCATTTAATTTAATTTCT+TGG | + | chr2.3:38651420-38651439 | MS.gene84397:intron | 20.0% |
| !!! | TATTTTTCTTCTTGCATTTT+TGG | + | chr2.3:38651882-38651901 | MS.gene84397:intron | 20.0% |
| !!! | TCAACAAAATATTTAAAGTG+GGG | - | chr2.3:38648555-38648574 | None:intergenic | 20.0% |
| !!! | TTTAGACTAAATTGCTTTTT+TGG | + | chr2.3:38648281-38648300 | MS.gene84397:intron | 20.0% |
| !!! | TTTGGTGAAAGTTTTAATAA+TGG | - | chr2.3:38646860-38646879 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTAGGCAATAATT+TGG | - | chr2.3:38649839-38649858 | None:intergenic | 20.0% |
| ! | AAAAAAAATTCAGCCCTAAT+AGG | + | chr2.3:38647693-38647712 | MS.gene84397:intron | 25.0% |
| ! | AAAAGAAACTAAAAAGGTCT+TGG | - | chr2.3:38649732-38649751 | None:intergenic | 25.0% |
| ! | AAGATAACTTTGGTATTCTT+CGG | - | chr2.3:38652246-38652265 | None:intergenic | 25.0% |
| ! | ACAATATAGTACGTGTTATA+TGG | + | chr2.3:38646075-38646094 | MS.gene84397:intron | 25.0% |
| ! | ATAATCTTAAGGGACTTAAA+CGG | - | chr2.3:38648358-38648377 | None:intergenic | 25.0% |
| ! | ATAGTGACATCATTATCATT+AGG | - | chr2.3:38649314-38649333 | None:intergenic | 25.0% |
| ! | ATCTCATAATCTCTGATTTA+TGG | + | chr2.3:38649233-38649252 | MS.gene84397:intron | 25.0% |
| ! | CAATATAGTACGTGTTATAT+GGG | + | chr2.3:38646076-38646095 | MS.gene84397:intron | 25.0% |
| ! | CCAATTTAGAAATAAATCCA+TGG | - | chr2.3:38648829-38648848 | None:intergenic | 25.0% |
| ! | CTATATACTATATACGAATG+TGG | - | chr2.3:38651390-38651409 | None:intergenic | 25.0% |
| ! | GATACATTGTGATTATAGAA+AGG | + | chr2.3:38650727-38650746 | MS.gene84397:intron | 25.0% |
| ! | GATCTAGAAATTTCAATAAG+TGG | - | chr2.3:38649396-38649415 | None:intergenic | 25.0% |
| ! | GCCTAAAGAAAAAAAAAAGA+AGG | + | chr2.3:38649846-38649865 | MS.gene84397:intron | 25.0% |
| ! | TAAACATATGTTTATAGGCA+GGG | + | chr2.3:38651795-38651814 | MS.gene84397:intron | 25.0% |
| ! | TAGATTTCAGAAGATTCAAA+AGG | + | chr2.3:38652214-38652233 | MS.gene84397:CDS | 25.0% |
| ! | TAGTATATATTACTCGTACA+TGG | + | chr2.3:38650817-38650836 | MS.gene84397:intron | 25.0% |
| ! | TCAAATTAGTGAGAACATAT+AGG | + | chr2.3:38646911-38646930 | MS.gene84397:intron | 25.0% |
| ! | TCTCTTCTAAATGCAAAAAT+TGG | - | chr2.3:38652392-38652411 | None:intergenic | 25.0% |
| ! | TGAAAATGACCTATATTACA+GGG | - | chr2.3:38647629-38647648 | None:intergenic | 25.0% |
| ! | TGAAATAGAAACTAAAGAGT+GGG | - | chr2.3:38648503-38648522 | None:intergenic | 25.0% |
| ! | TTAGTACTTCTATGGTTAAT+TGG | + | chr2.3:38646880-38646899 | MS.gene84397:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr2.3:38646402-38646421 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | + | chr2.3:38647004-38647023 | MS.gene84397:intron | 25.0% |
| !! | CTTTTAACAGGGTAATTTTA+AGG | + | chr2.3:38649929-38649948 | MS.gene84397:intron | 25.0% |
| !! | TAGCATATAGCTTTTCAAAA+CGG | - | chr2.3:38650264-38650283 | None:intergenic | 25.0% |
| !! | TATGGCTATCTCTATTATTT+TGG | + | chr2.3:38650496-38650515 | MS.gene84397:intron | 25.0% |
| !! | TTATAGGTGAGGTATTTATT+CGG | + | chr2.3:38652093-38652112 | MS.gene84397:intron | 25.0% |
| !! | TTCTAAAAGATTAGCTATGT+CGG | + | chr2.3:38646432-38646451 | MS.gene84397:intron | 25.0% |
| !! | TTTAACACCAATTTTATCAG+CGG | - | chr2.3:38650048-38650067 | None:intergenic | 25.0% |
| !!! | AATTAATCCTGTTTTTCCTT+AGG | + | chr2.3:38651701-38651720 | MS.gene84397:intron | 25.0% |
| !!! | AGAGTCTTTTGTTTTTTGAA+AGG | + | chr2.3:38651319-38651338 | MS.gene84397:intron | 25.0% |
| !!! | CCATGGATTTATTTCTAAAT+TGG | + | chr2.3:38648826-38648845 | MS.gene84397:intron | 25.0% |
| !!! | CCCTTCTTTTTTTTTTCTTT+AGG | - | chr2.3:38649850-38649869 | None:intergenic | 25.0% |
| !!! | GCTGAATTTTTTTTTTACAG+AGG | - | chr2.3:38647687-38647706 | None:intergenic | 25.0% |
| !!! | TAACCATAGAAGTACTAATT+TGG | - | chr2.3:38646878-38646897 | None:intergenic | 25.0% |
| AAAAAACGAACTCACGTAAT+CGG | - | chr2.3:38648026-38648045 | None:intergenic | 30.0% | |
| AAAACTTCTTTGGCATCTTT+AGG | - | chr2.3:38651604-38651623 | None:intergenic | 30.0% | |
| AAATACCTCACCTATAAACA+GGG | - | chr2.3:38652090-38652109 | None:intergenic | 30.0% | |
| AAATTGGAGGAACAACAAAT+TGG | - | chr2.3:38652376-38652395 | None:intergenic | 30.0% | |
| AACAAAAGACTCTCACTAAA+CGG | - | chr2.3:38651312-38651331 | None:intergenic | 30.0% | |
| AATTACCACTACTAATGAAC+GGG | + | chr2.3:38652149-38652168 | MS.gene84397:intron | 30.0% | |
| AATTACGAGGAAGAAAACAT+TGG | + | chr2.3:38648712-38648731 | MS.gene84397:intron | 30.0% | |
| ACAATTTCATTGTTTCGTCT+AGG | - | chr2.3:38651843-38651862 | None:intergenic | 30.0% | |
| ACACCTTTAATGTTCCATAA+TGG | - | chr2.3:38646680-38646699 | None:intergenic | 30.0% | |
| AGATAACTTTGGTATTCTTC+GGG | - | chr2.3:38652245-38652264 | None:intergenic | 30.0% | |
| ATAAATATGAAGCACGGATA+CGG | - | chr2.3:38647065-38647084 | None:intergenic | 30.0% | |
| ATGCAGAATGAATCTCTAAA+TGG | + | chr2.3:38651484-38651503 | MS.gene84397:intron | 30.0% | |
| CAATTACCACTACTAATGAA+CGG | + | chr2.3:38652148-38652167 | MS.gene84397:intron | 30.0% | |
| CAATTTCATTGTTTCGTCTA+GGG | - | chr2.3:38651842-38651861 | None:intergenic | 30.0% | |
| CCAAAAGAAAGTCAAAATTC+TGG | + | chr2.3:38651675-38651694 | MS.gene84397:CDS | 30.0% | |
| CTAAACATATGTTTATAGGC+AGG | + | chr2.3:38651794-38651813 | MS.gene84397:intron | 30.0% | |
| CTCAGAACCACTTTATTATT+GGG | + | chr2.3:38646730-38646749 | MS.gene84397:CDS | 30.0% | |
| CTGAAAATGACCTATATTAC+AGG | - | chr2.3:38647630-38647649 | None:intergenic | 30.0% | |
| CTTCCATTATGGAACATTAA+AGG | + | chr2.3:38646674-38646693 | MS.gene84397:intron | 30.0% | |
| CTTCTAAATGCAAAAATTGG+AGG | - | chr2.3:38652389-38652408 | None:intergenic | 30.0% | |
| GAAAATGACCTATATTACAG+GGG | - | chr2.3:38647628-38647647 | None:intergenic | 30.0% | |
| GAAATAGAAACTAAAGAGTG+GGG | - | chr2.3:38648502-38648521 | None:intergenic | 30.0% | |
| GAAATGATCTATATTCCAGA+GGG | + | chr2.3:38647851-38647870 | MS.gene84397:intron | 30.0% | |
| GAACAATTTCAACATTGCAA+TGG | - | chr2.3:38647253-38647272 | None:intergenic | 30.0% | |
| GGATCAACAAGTATGATATA+TGG | + | chr2.3:38647191-38647210 | MS.gene84397:CDS | 30.0% | |
| GTGAAATAGAAACTAAAGAG+TGG | - | chr2.3:38648504-38648523 | None:intergenic | 30.0% | |
| GTGTAACGAGATAATCTTAA+GGG | - | chr2.3:38648368-38648387 | None:intergenic | 30.0% | |
| TAAATACCTCACCTATAAAC+AGG | - | chr2.3:38652091-38652110 | None:intergenic | 30.0% | |
| TAACCCAACTAATACACTAT+GGG | + | chr2.3:38648582-38648601 | MS.gene84397:intron | 30.0% | |
| TAGACAATATGAGCAAATGA+AGG | - | chr2.3:38646170-38646189 | None:intergenic | 30.0% | |
| TAGTGTTATCACAAATTACG+AGG | + | chr2.3:38648699-38648718 | MS.gene84397:intron | 30.0% | |
| TATATTATACACACACACGT+TGG | + | chr2.3:38651170-38651189 | MS.gene84397:intron | 30.0% | |
| TCACCAAATTAGTACTTCTA+TGG | + | chr2.3:38646872-38646891 | MS.gene84397:intron | 30.0% | |
| TCCTACAAAATCTTCCATTA+TGG | + | chr2.3:38646663-38646682 | MS.gene84397:intron | 30.0% | |
| TCTCAGAACCACTTTATTAT+TGG | + | chr2.3:38646729-38646748 | MS.gene84397:CDS | 30.0% | |
| TGACTTGAACAAGATAACTT+TGG | - | chr2.3:38652256-38652275 | None:intergenic | 30.0% | |
| TGCAGAATGAATCTCTAAAT+GGG | + | chr2.3:38651485-38651504 | MS.gene84397:intron | 30.0% | |
| TGGTAACATTCATAGACAAT+CGG | + | chr2.3:38649207-38649226 | MS.gene84397:intron | 30.0% | |
| TTAACATCTGCAAATTCAAG+TGG | - | chr2.3:38652181-38652200 | None:intergenic | 30.0% | |
| TTAAGAGTTGTAATGAAGCA+CGG | - | chr2.3:38646499-38646518 | None:intergenic | 30.0% | |
| TTACACAAATCATTCAGTTC+AGG | + | chr2.3:38647547-38647566 | MS.gene84397:CDS | 30.0% | |
| TTACCCATAGTGTATTAGTT+GGG | - | chr2.3:38648588-38648607 | None:intergenic | 30.0% | |
| TTATGCACCCAATAATAAAG+TGG | - | chr2.3:38646740-38646759 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | - | chr2.3:38646972-38646991 | None:intergenic | 30.0% | |
| TTGGTAAAATGAGAAACCTA+AGG | - | chr2.3:38651720-38651739 | None:intergenic | 30.0% | |
| TTTACCCATAGTGTATTAGT+TGG | - | chr2.3:38648589-38648608 | None:intergenic | 30.0% | |
| TTTAGAAGAGATTGCACTTA+TGG | + | chr2.3:38652401-38652420 | MS.gene84397:CDS | 30.0% | |
| TTTGTGTAATTCCCATGATT+TGG | - | chr2.3:38647536-38647555 | None:intergenic | 30.0% | |
| ! | AATGGAAGATTTTGTAGGAA+TGG | - | chr2.3:38646662-38646681 | None:intergenic | 30.0% |
| ! | AGTTTCTTTTTACTACCTCA+GGG | + | chr2.3:38649742-38649761 | MS.gene84397:CDS | 30.0% |
| ! | ATCCTCTTTGTTGCTTATTA+AGG | + | chr2.3:38651745-38651764 | MS.gene84397:intron | 30.0% |
| ! | CGTTTTTGTATGACCTATTA+GGG | + | chr2.3:38647759-38647778 | MS.gene84397:intron | 30.0% |
| ! | GTTTTTGTATGACCTATTAG+GGG | + | chr2.3:38647760-38647779 | MS.gene84397:intron | 30.0% |
| ! | TAGTTTCTTTTTACTACCTC+AGG | + | chr2.3:38649741-38649760 | MS.gene84397:CDS | 30.0% |
| ! | TATAGGTGAGGTATTTATTC+GGG | + | chr2.3:38652094-38652113 | MS.gene84397:intron | 30.0% |
| ! | TCCTCTTTGTTGCTTATTAA+GGG | + | chr2.3:38651746-38651765 | MS.gene84397:intron | 30.0% |
| ! | TCTGGAATATAGATCATTTC+CGG | - | chr2.3:38647851-38647870 | None:intergenic | 30.0% |
| ! | TGATCTCTCAAGAAAGTTTT+TGG | + | chr2.3:38648966-38648985 | MS.gene84397:intron | 30.0% |
| ! | TTTTTGTATGACCTATTAGG+GGG | + | chr2.3:38647761-38647780 | MS.gene84397:intron | 30.0% |
| !! | ACCTTAATTTGCTTCTTGTT+AGG | - | chr2.3:38647892-38647911 | None:intergenic | 30.0% |
| !! | CTGTAATATAGGTCATTTTC+AGG | + | chr2.3:38647628-38647647 | MS.gene84397:intron | 30.0% |
| !! | TCAAACAATATTGGCTTCTA+TGG | + | chr2.3:38646622-38646641 | MS.gene84397:intron | 30.0% |
| !! | TCCATAATGGAAGATTTTGT+AGG | - | chr2.3:38646667-38646686 | None:intergenic | 30.0% |
| !! | TCGTTTTTGTATGACCTATT+AGG | + | chr2.3:38647758-38647777 | MS.gene84397:intron | 30.0% |
| !! | TTTGATTTTCTCCGAAGTTT+GGG | + | chr2.3:38647227-38647246 | MS.gene84397:CDS | 30.0% |
| !!! | AAGATGCTGCATTTTTTCAT+AGG | - | chr2.3:38647943-38647962 | None:intergenic | 30.0% |
| !!! | CCAGAATTTTGACTTTCTTT+TGG | - | chr2.3:38651678-38651697 | None:intergenic | 30.0% |
| !!! | TTTTGATTTTCTCCGAAGTT+TGG | + | chr2.3:38647226-38647245 | MS.gene84397:CDS | 30.0% |
| AAAAAAAAGCTAGCCAATCC+AGG | + | chr2.3:38650389-38650408 | MS.gene84397:intron | 35.0% | |
| AAAAAGAAAATGCTCCCGAA+AGG | + | chr2.3:38648781-38648800 | MS.gene84397:intron | 35.0% | |
| AAAACAGTAAAGAGCCAAAG+TGG | + | chr2.3:38650639-38650658 | MS.gene84397:intron | 35.0% | |
| AAACCGTCAGATTCTTAAAC+AGG | + | chr2.3:38646251-38646270 | MS.gene84397:intron | 35.0% | |
| AACCGTCAGATTCTTAAACA+GGG | + | chr2.3:38646252-38646271 | MS.gene84397:intron | 35.0% | |
| AAGAAAATTAAGGTAGCCCA+TGG | + | chr2.3:38648809-38648828 | MS.gene84397:intron | 35.0% | |
| AATACCTCACCTATAAACAG+GGG | - | chr2.3:38652089-38652108 | None:intergenic | 35.0% | |
| ACCCTTAATAAGCAACAAAG+AGG | - | chr2.3:38651750-38651769 | None:intergenic | 35.0% | |
| AGGATGTGATATCCACTATA+TGG | - | chr2.3:38649592-38649611 | None:intergenic | 35.0% | |
| ATACGCTTAACACCAAATCA+TGG | + | chr2.3:38647521-38647540 | MS.gene84397:CDS | 35.0% | |
| ATCAACTGAGTTAAGCTCAT+GGG | - | chr2.3:38650185-38650204 | None:intergenic | 35.0% | |
| ATGGTGAAGTGAATGGTATT+TGG | - | chr2.3:38646789-38646808 | None:intergenic | 35.0% | |
| ATTCTCACCGCTGATAAAAT+TGG | + | chr2.3:38650038-38650057 | MS.gene84397:CDS | 35.0% | |
| ATTCTCTCTCTCTCTTCAAA+TGG | + | chr2.3:38650864-38650883 | MS.gene84397:intron | 35.0% | |
| CAATTACTAACGACAGAAAC+AGG | - | chr2.3:38647136-38647155 | None:intergenic | 35.0% | |
| CAGAATGAATCTCTAAATGG+GGG | + | chr2.3:38651487-38651506 | MS.gene84397:intron | 35.0% | |
| CCAAAGTGGAACTATTACAT+AGG | + | chr2.3:38650653-38650672 | MS.gene84397:intron | 35.0% | |
| CCTATGTAATAGTTCCACTT+TGG | - | chr2.3:38650656-38650675 | None:intergenic | 35.0% | |
| CGACGACTATAATTGTTGAA+AGG | + | chr2.3:38649110-38649129 | MS.gene84397:intron | 35.0% | |
| CGGAAACATCTCTTCATATA+AGG | - | chr2.3:38651292-38651311 | None:intergenic | 35.0% | |
| CGTGTAACGAGATAATCTTA+AGG | - | chr2.3:38648369-38648388 | None:intergenic | 35.0% | |
| CTAACCCAACTAATACACTA+TGG | + | chr2.3:38648581-38648600 | MS.gene84397:intron | 35.0% | |
| CTGGAATATAGATCATTTCC+GGG | - | chr2.3:38647850-38647869 | None:intergenic | 35.0% | |
| GAATGCAGGAAATTGTAGTA+GGG | + | chr2.3:38649544-38649563 | MS.gene84397:intron | 35.0% | |
| GAATTGAATGGTGAAGTGAA+TGG | - | chr2.3:38646796-38646815 | None:intergenic | 35.0% | |
| GCAACAAAGAGGATATAAGT+TGG | - | chr2.3:38651739-38651758 | None:intergenic | 35.0% | |
| GCAGAATGAATCTCTAAATG+GGG | + | chr2.3:38651486-38651505 | MS.gene84397:intron | 35.0% | |
| GCAGATGTTAACACTATCAA+CGG | + | chr2.3:38652190-38652209 | MS.gene84397:intron | 35.0% | |
| GCCTAACAAGAAGCAAATTA+AGG | + | chr2.3:38647888-38647907 | MS.gene84397:intron | 35.0% | |
| GGAAATGATCTATATTCCAG+AGG | + | chr2.3:38647850-38647869 | MS.gene84397:intron | 35.0% | |
| GGATGTGATATCCACTATAT+GGG | - | chr2.3:38649591-38649610 | None:intergenic | 35.0% | |
| GTCATAGTTAGTAGGGTTAA+TGG | + | chr2.3:38647595-38647614 | MS.gene84397:intron | 35.0% | |
| TAAAGGTAATTGGCCAAAGT+TGG | - | chr2.3:38650569-38650588 | None:intergenic | 35.0% | |
| TACACTACTCTTCCTACAAA+CGG | - | chr2.3:38646102-38646121 | None:intergenic | 35.0% | |
| TACGCTTAACACCAAATCAT+GGG | + | chr2.3:38647522-38647541 | MS.gene84397:CDS | 35.0% | |
| TAGAAAGGGTTTACTTGCAT+TGG | + | chr2.3:38650742-38650761 | MS.gene84397:intron | 35.0% | |
| TATGAAGCACAAACACTCAT+CGG | + | chr2.3:38646324-38646343 | MS.gene84397:intron | 35.0% | |
| TCTCATTTCATGTGATACGA+AGG | - | chr2.3:38650911-38650930 | None:intergenic | 35.0% | |
| TGAGAAACCTAAGGAAAAAC+AGG | - | chr2.3:38651711-38651730 | None:intergenic | 35.0% | |
| TTCTGATGCCCCTAAAAAAA+TGG | + | chr2.3:38652024-38652043 | MS.gene84397:intron | 35.0% | |
| ! | AAGAAGAACCTTGTTCTGAA+TGG | - | chr2.3:38649656-38649675 | None:intergenic | 35.0% |
| ! | AATGTTTGAAACAGACGATG+TGG | - | chr2.3:38647275-38647294 | None:intergenic | 35.0% |
| ! | AATTAGAGTCCTTTTCAGTG+TGG | - | chr2.3:38647465-38647484 | None:intergenic | 35.0% |
| ! | ATTTTTACAGAGGGTAAACC+CGG | + | chr2.3:38647829-38647848 | MS.gene84397:intron | 35.0% |
| ! | GGTTTTTGTATGGCCTATTA+GGG | - | chr2.3:38647709-38647728 | None:intergenic | 35.0% |
| ! | GTATTTGTATTGACGAATGC+AGG | + | chr2.3:38649530-38649549 | MS.gene84397:intron | 35.0% |
| ! | GTGTTTTACCCCTGTAATAT+AGG | + | chr2.3:38647617-38647636 | MS.gene84397:intron | 35.0% |
| ! | GTTTCTTTTTACTACCTCAG+GGG | + | chr2.3:38649743-38649762 | MS.gene84397:CDS | 35.0% |
| ! | TCTAGGGCATCAAAAATCTT+AGG | - | chr2.3:38651826-38651845 | None:intergenic | 35.0% |
| ! | TGAAATTTCTAGATCCGTCA+TGG | + | chr2.3:38649401-38649420 | MS.gene84397:intron | 35.0% |
| ! | TGAGGTATTTATTCGGGTAT+AGG | + | chr2.3:38652100-38652119 | MS.gene84397:intron | 35.0% |
| ! | TGGTTGTTTCGTAACTAACA+GGG | + | chr2.3:38646583-38646602 | MS.gene84397:intron | 35.0% |
| ! | TGGTTTTTGTATGGCCTATT+AGG | - | chr2.3:38647710-38647729 | None:intergenic | 35.0% |
| ! | TTGGTTGTTTCGTAACTAAC+AGG | + | chr2.3:38646582-38646601 | MS.gene84397:intron | 35.0% |
| ! | TTTTCAGAATACCCCCTAAT+AGG | - | chr2.3:38647775-38647794 | None:intergenic | 35.0% |
| !! | AGTGTATTAGTTGGGTTAGT+TGG | - | chr2.3:38648580-38648599 | None:intergenic | 35.0% |
| !! | CTCATATTGTCTAGTCTTAG+AGG | + | chr2.3:38646177-38646196 | MS.gene84397:intron | 35.0% |
| !! | CTGTTTCTGTCGTTAGTAAT+TGG | + | chr2.3:38647134-38647153 | MS.gene84397:CDS | 35.0% |
| !! | TAACGTACTTTTGTTTGCAG+CGG | + | chr2.3:38647088-38647107 | MS.gene84397:intron | 35.0% |
| !! | TTTTTGCCATTTGCTACTGA+GGG | + | chr2.3:38649990-38650009 | MS.gene84397:CDS | 35.0% |
| !!! | CTTGATCCCATTTTTTCCAA+TGG | + | chr2.3:38649673-38649692 | MS.gene84397:CDS | 35.0% |
| !!! | GATTACGTGAGTTCGTTTTT+TGG | + | chr2.3:38648025-38648044 | MS.gene84397:intron | 35.0% |
| !!! | TTTTGACTTTCTTTTGGCAG+AGG | - | chr2.3:38651672-38651691 | None:intergenic | 35.0% |
| !!! | TTTTTTGCCATTTGCTACTG+AGG | + | chr2.3:38649989-38650008 | MS.gene84397:CDS | 35.0% |
| AATATCCCAAAGTTCTCCCA+TGG | - | chr2.3:38645949-38645968 | None:intergenic | 40.0% | |
| AATGAATCTCTAAATGGGGG+AGG | + | chr2.3:38651490-38651509 | MS.gene84397:CDS | 40.0% | |
| ACAACTCGAACTCTTAGGTT+TGG | - | chr2.3:38651538-38651557 | None:intergenic | 40.0% | |
| ACAGAATTGAGCATGCATAG+AGG | - | chr2.3:38649612-38649631 | None:intergenic | 40.0% | |
| ACCGTCAGATTCTTAAACAG+GGG | + | chr2.3:38646253-38646272 | MS.gene84397:intron | 40.0% | |
| AGAAAGACCTCAAATTCAGC+TGG | + | chr2.3:38646142-38646161 | MS.gene84397:intron | 40.0% | |
| AGGAAATTGTAGTAGGGTAC+CGG | + | chr2.3:38649550-38649569 | MS.gene84397:intron | 40.0% | |
| ATCAATGAAGCTCCTAGGAT+CGG | - | chr2.3:38647164-38647183 | None:intergenic | 40.0% | |
| ATCCTAGGAGCTTCATTGAT+GGG | + | chr2.3:38647164-38647183 | MS.gene84397:CDS | 40.0% | |
| ATTAGCCCGTTCATTAGTAG+TGG | - | chr2.3:38652157-38652176 | None:intergenic | 40.0% | |
| CAACTCGAACTCTTAGGTTT+GGG | - | chr2.3:38651537-38651556 | None:intergenic | 40.0% | |
| CAAGCAGCTTGACAAAGAAT+GGG | + | chr2.3:38646284-38646303 | MS.gene84397:intron | 40.0% | |
| CACTCCAAGAGAGCAAAATT+GGG | + | chr2.3:38652328-38652347 | MS.gene84397:CDS | 40.0% | |
| CATCAACTGAGTTAAGCTCA+TGG | - | chr2.3:38650186-38650205 | None:intergenic | 40.0% | |
| CATGAACAACTCGAACTCTT+AGG | - | chr2.3:38651543-38651562 | None:intergenic | 40.0% | |
| CATTGCTAACAAAGCTACCA+CGG | - | chr2.3:38649699-38649718 | None:intergenic | 40.0% | |
| CGAATGCAGGAAATTGTAGT+AGG | + | chr2.3:38649543-38649562 | MS.gene84397:intron | 40.0% | |
| CTTCTCTACCATTCAGAACA+AGG | + | chr2.3:38649645-38649664 | MS.gene84397:CDS | 40.0% | |
| CTTTGTTAGCAATGTGGCTT+TGG | + | chr2.3:38649705-38649724 | MS.gene84397:CDS | 40.0% | |
| GAGAACATATAGGCATGTTC+CGG | + | chr2.3:38646921-38646940 | MS.gene84397:intron | 40.0% | |
| GAGTGTGGTATCTGCATAAA+AGG | - | chr2.3:38647438-38647457 | None:intergenic | 40.0% | |
| GCAGCTATGATGTTTCATGT+GGG | + | chr2.3:38646704-38646723 | MS.gene84397:CDS | 40.0% | |
| GGGTAGACTACATCAAACAT+GGG | + | chr2.3:38649763-38649782 | MS.gene84397:CDS | 40.0% | |
| GTAATTGGAATTCCGATCCT+AGG | + | chr2.3:38647149-38647168 | MS.gene84397:CDS | 40.0% | |
| GTTGTAATGAAGCACGGATA+CGG | - | chr2.3:38646493-38646512 | None:intergenic | 40.0% | |
| TCAACTGAGTTAAGCTCATG+GGG | - | chr2.3:38650184-38650203 | None:intergenic | 40.0% | |
| TCAAGCAGCTTGACAAAGAA+TGG | + | chr2.3:38646283-38646302 | MS.gene84397:intron | 40.0% | |
| TCACTCCAAGAGAGCAAAAT+TGG | + | chr2.3:38652327-38652346 | MS.gene84397:CDS | 40.0% | |
| TCTGAATGGTAGAGAAGCAA+AGG | - | chr2.3:38649642-38649661 | None:intergenic | 40.0% | |
| TGCAGCTATGATGTTTCATG+TGG | + | chr2.3:38646703-38646722 | MS.gene84397:CDS | 40.0% | |
| TGGGTGCATAAGAAGTTTCA+TGG | + | chr2.3:38646749-38646768 | MS.gene84397:CDS | 40.0% | |
| TTGATACCCTCAGTAGCAAA+TGG | - | chr2.3:38649999-38650018 | None:intergenic | 40.0% | |
| TTGGAGGAACAACAAATTGG+TGG | - | chr2.3:38652373-38652392 | None:intergenic | 40.0% | |
| TTTAACTGCAGCTGTGATCT+TGG | + | chr2.3:38651570-38651589 | MS.gene84397:CDS | 40.0% | |
| ! | ACTGTGGTACTGGAATTGAA+TGG | - | chr2.3:38646808-38646827 | None:intergenic | 40.0% |
| ! | CAAAGAAGTTTTCCTTACCG+GGG | + | chr2.3:38651612-38651631 | MS.gene84397:CDS | 40.0% |
| ! | CATTGCAAGACATGGATTGT+TGG | + | chr2.3:38652296-38652315 | MS.gene84397:CDS | 40.0% |
| ! | CCAAAGAAGTTTTCCTTACC+GGG | + | chr2.3:38651611-38651630 | MS.gene84397:CDS | 40.0% |
| ! | GCCAAAGAAGTTTTCCTTAC+CGG | + | chr2.3:38651610-38651629 | MS.gene84397:CDS | 40.0% |
| ! | GTAATTGGCCAAAGTTGGTT+TGG | - | chr2.3:38650564-38650583 | None:intergenic | 40.0% |
| ! | TGGTGTTAAAGTCATCAGCT+TGG | + | chr2.3:38650058-38650077 | MS.gene84397:CDS | 40.0% |
| !! | AACGTACTTTTGTTTGCAGC+GGG | + | chr2.3:38647089-38647108 | MS.gene84397:intron | 40.0% |
| !! | AAGGGGGTAGTCTTATAAAG+AGG | + | chr2.3:38649865-38649884 | MS.gene84397:intron | 40.0% |
| !! | ATTTCTTGGCTTTGCGAGAA+AGG | + | chr2.3:38651434-38651453 | MS.gene84397:intron | 40.0% |
| !! | CTAAGAGTTCGAGTTGTTCA+TGG | + | chr2.3:38651541-38651560 | MS.gene84397:CDS | 40.0% |
| !! | GAGGCTTGCTTTATTTGCTA+TGG | + | chr2.3:38646196-38646215 | MS.gene84397:intron | 40.0% |
| !! | GGAGAACTTTGGGATATTCA+AGG | + | chr2.3:38645951-38645970 | MS.gene84397:CDS | 40.0% |
| !! | TATATGTGTCGGTGTCGTAT+CGG | - | chr2.3:38646391-38646410 | None:intergenic | 40.0% |
| !! | TGGTAGCTTTGTTAGCAATG+TGG | + | chr2.3:38649699-38649718 | MS.gene84397:CDS | 40.0% |
| AATGCAGGTGAAGCCTATTG+GGG | + | chr2.3:38648468-38648487 | MS.gene84397:intron | 45.0% | |
| ACCACGGCCATTGGAAAAAA+TGG | - | chr2.3:38649683-38649702 | None:intergenic | 45.0% | |
| ACGGATACGGACACAAATAC+CGG | - | chr2.3:38646480-38646499 | None:intergenic | 45.0% | |
| AGCTAGTGAATGACCTGGAT+TGG | - | chr2.3:38650700-38650719 | None:intergenic | 45.0% | |
| AGCTTGACAAAGAATGGGAC+TGG | + | chr2.3:38646289-38646308 | MS.gene84397:intron | 45.0% | |
| ATATAGGCATGTTCCGGTGT+CGG | + | chr2.3:38646927-38646946 | MS.gene84397:intron | 45.0% | |
| ATCCCATCAATGAAGCTCCT+AGG | - | chr2.3:38647169-38647188 | None:intergenic | 45.0% | |
| CAAATCAAGCTAGCCAATCC+AGG | + | chr2.3:38650684-38650703 | MS.gene84397:intron | 45.0% | |
| CACAAATACCGGACACGATA+CGG | - | chr2.3:38646469-38646488 | None:intergenic | 45.0% | |
| CACTCTACACCACACTGAAA+AGG | + | chr2.3:38647453-38647472 | MS.gene84397:CDS | 45.0% | |
| CATTGCAATGGCCCAAACTT+CGG | - | chr2.3:38647241-38647260 | None:intergenic | 45.0% | |
| CCACGGCCATTGGAAAAAAT+GGG | - | chr2.3:38649682-38649701 | None:intergenic | 45.0% | |
| CCCCCTGTTTAAGAATCTGA+CGG | - | chr2.3:38646257-38646276 | None:intergenic | 45.0% | |
| CCCGGTAAGGAAAACTTCTT+TGG | - | chr2.3:38651614-38651633 | None:intergenic | 45.0% | |
| CCCTAAAAAAATGGTGCCCT+GGG | + | chr2.3:38652033-38652052 | MS.gene84397:intron | 45.0% | |
| CCGTCAGATTCTTAAACAGG+GGG | + | chr2.3:38646254-38646273 | MS.gene84397:intron | 45.0% | |
| GAATGCAGGTGAAGCCTATT+GGG | + | chr2.3:38648467-38648486 | MS.gene84397:intron | 45.0% | |
| GATCCTAGGAGCTTCATTGA+TGG | + | chr2.3:38647163-38647182 | MS.gene84397:CDS | 45.0% | |
| GCACAAACACTCATCGGATA+AGG | + | chr2.3:38646330-38646349 | MS.gene84397:intron | 45.0% | |
| GGAGCTTCATTGATGGGATA+TGG | + | chr2.3:38647170-38647189 | MS.gene84397:CDS | 45.0% | |
| GGGGTAGACTACATCAAACA+TGG | + | chr2.3:38649762-38649781 | MS.gene84397:CDS | 45.0% | |
| GTCATAGCTAGTGAATGACC+TGG | - | chr2.3:38650705-38650724 | None:intergenic | 45.0% | |
| GTGTTATATGGGCCGTTTGT+AGG | + | chr2.3:38646087-38646106 | MS.gene84397:intron | 45.0% | |
| TATGCGATTGCCAGATGATG+TGG | + | chr2.3:38652436-38652455 | MS.gene84397:CDS | 45.0% | |
| TCCAGTACCACAGTCAGTAA+CGG | + | chr2.3:38646814-38646833 | MS.gene84397:CDS | 45.0% | |
| TCCGTCAACCAAACCAACTT+TGG | + | chr2.3:38650553-38650572 | MS.gene84397:intron | 45.0% | |
| TCGTGCATGTCAGTCTATGA+AGG | - | chr2.3:38648449-38648468 | None:intergenic | 45.0% | |
| TGATATCCACTATATGGGCC+AGG | - | chr2.3:38649586-38649605 | None:intergenic | 45.0% | |
| TGGGCCAGGAAAACAAATTC+CGG | - | chr2.3:38649572-38649591 | None:intergenic | 45.0% | |
| TTTCAGTGTGGTGTAGAGTG+TGG | - | chr2.3:38647453-38647472 | None:intergenic | 45.0% | |
| TTTCCTAGTGCGTCAAAGAG+AGG | - | chr2.3:38647502-38647521 | None:intergenic | 45.0% | |
| TTTGATGTAGTCTACCCCTG+AGG | - | chr2.3:38649760-38649779 | None:intergenic | 45.0% | |
| ! | AGACATGGATTGTTGGCAAG+TGG | + | chr2.3:38652303-38652322 | MS.gene84397:CDS | 45.0% |
| ! | ATCAAACATGGGTTGTCCCT+AGG | + | chr2.3:38649774-38649793 | MS.gene84397:CDS | 45.0% |
| ! | CAGCTTGGCTGCTTTGAATA+AGG | + | chr2.3:38650073-38650092 | MS.gene84397:CDS | 45.0% |
| ! | CGTCAAAGAGAGGCATGAAA+AGG | - | chr2.3:38647492-38647511 | None:intergenic | 45.0% |
| ! | CTCAGTTGATGCAAAGTCTG+AGG | + | chr2.3:38650195-38650214 | MS.gene84397:intron | 45.0% |
| ! | CTGTTGAGTGTTTTACCCTC+TGG | - | chr2.3:38647869-38647888 | None:intergenic | 45.0% |
| ! | GATTAGCTATGTCGGCATGT+CGG | + | chr2.3:38646440-38646459 | MS.gene84397:intron | 45.0% |
| ! | GTTGACGGATAGATACACGA+AGG | - | chr2.3:38650542-38650561 | None:intergenic | 45.0% |
| ! | TGTTTTCCTGGCCCATATAG+TGG | + | chr2.3:38649577-38649596 | MS.gene84397:CDS | 45.0% |
| !! | CTGGATTGGCTAGCTTGATT+TGG | - | chr2.3:38650686-38650705 | None:intergenic | 45.0% |
| !! | GCCAAAGTTGGTTTGGTTGA+CGG | - | chr2.3:38650557-38650576 | None:intergenic | 45.0% |
| !! | GGTACCGGAATTTGTTTTCC+TGG | + | chr2.3:38649565-38649584 | MS.gene84397:CDS | 45.0% |
| !! | TGGCTAGCTTGATTTGGACA+GGG | - | chr2.3:38650680-38650699 | None:intergenic | 45.0% |
| !! | TTGGCTAGCTTGATTTGGAC+AGG | - | chr2.3:38650681-38650700 | None:intergenic | 45.0% |
| !!! | CCAGGGCACCATTTTTTTAG+GGG | - | chr2.3:38652035-38652054 | None:intergenic | 45.0% |
| !!! | CCCAGGGCACCATTTTTTTA+GGG | - | chr2.3:38652036-38652055 | None:intergenic | 45.0% |
| !! | AAAATATTAGAATAATTAAA+AGG | - | chr2.3:38651868-38651887 | None:intergenic | 5.0% |
| !!! | TCTTAAAATTATTATTTTTT+AGG | - | chr2.3:38649905-38649924 | None:intergenic | 5.0% |
| !!! | TTATTTTTTTTTTATCATTT+TGG | + | chr2.3:38648312-38648331 | MS.gene84397:intron | 5.0% |
| !!! | TTTTTTTTTTACAAAAATTT+TGG | - | chr2.3:38647730-38647749 | None:intergenic | 5.0% |
| AACAAAGCTACCACGGCCAT+TGG | - | chr2.3:38649692-38649711 | None:intergenic | 50.0% | |
| ACACGACACGTGTTTGACAC+GGG | - | chr2.3:38646362-38646381 | None:intergenic | 50.0% | |
| ACCTCACCTATAAACAGGGG+TGG | - | chr2.3:38652086-38652105 | None:intergenic | 50.0% | |
| AGACTGACATGCACGAATGC+AGG | + | chr2.3:38648453-38648472 | MS.gene84397:intron | 50.0% | |
| ATAAACAGGGGTGGCCCTAT+GGG | - | chr2.3:38652077-38652096 | None:intergenic | 50.0% | |
| ATAGGGCCACCCCTGTTTAT+AGG | + | chr2.3:38652077-38652096 | MS.gene84397:intron | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | - | chr2.3:38646487-38646506 | None:intergenic | 50.0% | |
| ATGCCTCTCTTTGACGCACT+AGG | + | chr2.3:38647496-38647515 | MS.gene84397:CDS | 50.0% | |
| CAGCACAGCATTGCAAGACA+TGG | + | chr2.3:38652288-38652307 | MS.gene84397:CDS | 50.0% | |
| CATCGCTCGGTTTACCATGA+CGG | - | chr2.3:38649418-38649437 | None:intergenic | 50.0% | |
| CCAGTACCACAGTCAGTAAC+GGG | + | chr2.3:38646815-38646834 | MS.gene84397:CDS | 50.0% | |
| CCCCTAAAAAAATGGTGCCC+TGG | + | chr2.3:38652032-38652051 | MS.gene84397:intron | 50.0% | |
| CGAATGCAGGTGAAGCCTAT+TGG | + | chr2.3:38648466-38648485 | MS.gene84397:intron | 50.0% | |
| CGATTGCCAGATGATGTGGA+AGG | + | chr2.3:38652440-38652459 | MS.gene84397:CDS | 50.0% | |
| CTGAGTTAAGCTCATGGGGA+CGG | - | chr2.3:38650180-38650199 | None:intergenic | 50.0% | |
| GACACGACACGTGTTTGACA+CGG | - | chr2.3:38646363-38646382 | None:intergenic | 50.0% | |
| GACGGATAGATACACGAAGG+AGG | - | chr2.3:38650539-38650558 | None:intergenic | 50.0% | |
| TATAAACAGGGGTGGCCCTA+TGG | - | chr2.3:38652078-38652097 | None:intergenic | 50.0% | |
| TCCAAGCTTAGAAGTTGCCC+CGG | - | chr2.3:38651632-38651651 | None:intergenic | 50.0% | |
| TGGTGGAAATGAGTTCCACG+TGG | - | chr2.3:38652356-38652375 | None:intergenic | 50.0% | |
| ! | CACTTACCCGTTACTGACTG+TGG | - | chr2.3:38646824-38646843 | None:intergenic | 50.0% |
| ! | GGAGCCCAATTTTGCTCTCT+TGG | - | chr2.3:38652335-38652354 | None:intergenic | 50.0% |
| ! | TCTTGCAATGCTGTGCTGCT+TGG | - | chr2.3:38652286-38652305 | None:intergenic | 50.0% |
| ! | TGGGGGAGGAAAACTTTTCG+TGG | + | chr2.3:38651504-38651523 | MS.gene84397:CDS | 50.0% |
| !! | CTTTTGTTTGCAGCGGGAAC+CGG | + | chr2.3:38647095-38647114 | MS.gene84397:intron | 50.0% |
| !! | GAAGGCACCAGCTGAATTTG+AGG | - | chr2.3:38646152-38646171 | None:intergenic | 50.0% |
| !!! | CCCATTTTTTCCAATGGCCG+TGG | + | chr2.3:38649679-38649698 | MS.gene84397:CDS | 50.0% |
| !!! | GCCCAGGGCACCATTTTTTT+AGG | - | chr2.3:38652037-38652056 | None:intergenic | 50.0% |
| ACCGGGGCAACTTCTAAGCT+TGG | + | chr2.3:38651628-38651647 | MS.gene84397:CDS | 55.0% | |
| CACGACACGTGTTTGACACG+GGG | - | chr2.3:38646361-38646380 | None:intergenic | 55.0% | |
| CAGGTGAAGCCTATTGGGGT+CGG | + | chr2.3:38648472-38648491 | MS.gene84397:intron | 55.0% | |
| CAGGTGCTCCAAAACCGTAC+CGG | - | chr2.3:38647117-38647136 | None:intergenic | 55.0% | |
| CCAAGGCCTTCCACATCATC+TGG | - | chr2.3:38652449-38652468 | None:intergenic | 55.0% | |
| CCACCTGAAAGCCACACCTA+GGG | - | chr2.3:38649793-38649812 | None:intergenic | 55.0% | |
| CCAGATGATGTGGAAGGCCT+TGG | + | chr2.3:38652446-38652465 | MS.gene84397:CDS | 55.0% | |
| CGTCATGGTAAACCGAGCGA+TGG | + | chr2.3:38649416-38649435 | MS.gene84397:intron | 55.0% | |
| GAGCAAAATTGGGCTCCACG+TGG | + | chr2.3:38652338-38652357 | MS.gene84397:CDS | 55.0% | |
| GCCACCCCTGTTTATAGGTG+AGG | + | chr2.3:38652082-38652101 | MS.gene84397:intron | 55.0% | |
| GCTTAGAAGTTGCCCCGGTA+AGG | - | chr2.3:38651627-38651646 | None:intergenic | 55.0% | |
| GTCAGTGTCCTTGTCGTGTC+TGG | + | chr2.3:38647030-38647049 | MS.gene84397:intron | 55.0% | |
| GTTTCAGCTGCTCCATCGCT+CGG | - | chr2.3:38649431-38649450 | None:intergenic | 55.0% | |
| TGGGGTTATCCGACCCCAAT+AGG | - | chr2.3:38648484-38648503 | None:intergenic | 55.0% | |
| TGTCCCTAGGTGTGGCTTTC+AGG | + | chr2.3:38649787-38649806 | MS.gene84397:CDS | 55.0% | |
| ! | ACATGGGTTGTCCCTAGGTG+TGG | + | chr2.3:38649779-38649798 | MS.gene84397:CDS | 55.0% |
| ! | CCCGTTACTGACTGTGGTAC+TGG | - | chr2.3:38646818-38646837 | None:intergenic | 55.0% |
| ! | CCTAGGTGTGGCTTTCAGGT+GGG | + | chr2.3:38649791-38649810 | MS.gene84397:intron | 55.0% |
| !! | TCGGTGTTGAACACGACACG+TGG | - | chr2.3:38646953-38646972 | None:intergenic | 55.0% |
| CACGGACACCAGACACGACA+AGG | - | chr2.3:38647041-38647060 | None:intergenic | 60.0% | |
| CCCACCTGAAAGCCACACCT+AGG | - | chr2.3:38649794-38649813 | None:intergenic | 60.0% | |
| CCCTAGGTGTGGCTTTCAGG+TGG | + | chr2.3:38649790-38649809 | MS.gene84397:intron | 60.0% | |
| GTTTGCAGCGGGAACCGGTA+CGG | + | chr2.3:38647100-38647119 | MS.gene84397:intron | 60.0% | |
| ! | AGCGGGAACCGGTACGGTTT+TGG | + | chr2.3:38647106-38647125 | MS.gene84397:intron | 60.0% |
| ! | GTCGGTGTCCGTATCGTGTC+CGG | + | chr2.3:38646458-38646477 | MS.gene84397:intron | 60.0% |
| AACAGGGGTGGCCCTATGGG+CGG | - | chr2.3:38652074-38652093 | None:intergenic | 65.0% | |
| ACACGACACGTGGCCGACAC+CGG | - | chr2.3:38646943-38646962 | None:intergenic | 65.0% | |
| CCTATGGGCGGACGGGAGGG+CGG | - | chr2.3:38652062-38652081 | None:intergenic | 75.0% | |
| CGCCCTCCCGTCCGCCCATA+GGG | + | chr2.3:38652060-38652079 | MS.gene84397:intron | 75.0% | |
| GACGGGAGGGCGGTAGCCCA+GGG | - | chr2.3:38652052-38652071 | None:intergenic | 75.0% | |
| GGCCCTATGGGCGGACGGGA+GGG | - | chr2.3:38652065-38652084 | None:intergenic | 75.0% | |
| GGGGTGGCCCTATGGGCGGA+CGG | - | chr2.3:38652070-38652089 | None:intergenic | 75.0% | |
| GGGTGGCCCTATGGGCGGAC+GGG | - | chr2.3:38652069-38652088 | None:intergenic | 75.0% | |
| TGGCCCTATGGGCGGACGGG+AGG | - | chr2.3:38652066-38652085 | None:intergenic | 75.0% | |
| ! | CCGCCCTCCCGTCCGCCCAT+AGG | + | chr2.3:38652059-38652078 | MS.gene84397:intron | 80.0% |
| ! | GGACGGGAGGGCGGTAGCCC+AGG | - | chr2.3:38652053-38652072 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 38645942 | 38652478 | 38645942 | ID=MS.gene84397 |
| chr2.3 | mRNA | 38645942 | 38652478 | 38645942 | ID=MS.gene84397.t1;Parent=MS.gene84397 |
| chr2.3 | exon | 38645942 | 38645972 | 38645942 | ID=MS.gene84397.t1.exon1;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38645942 | 38645972 | 38645942 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| chr2.3 | exon | 38646696 | 38646836 | 38646696 | ID=MS.gene84397.t1.exon2;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38646696 | 38646836 | 38646696 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| chr2.3 | exon | 38647108 | 38647327 | 38647108 | ID=MS.gene84397.t1.exon3;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38647108 | 38647327 | 38647108 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| chr2.3 | exon | 38647447 | 38647568 | 38647447 | ID=MS.gene84397.t1.exon4;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38647447 | 38647568 | 38647447 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| chr2.3 | exon | 38649552 | 38649808 | 38649552 | ID=MS.gene84397.t1.exon5;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38649552 | 38649808 | 38649552 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| chr2.3 | exon | 38649987 | 38650094 | 38649987 | ID=MS.gene84397.t1.exon6;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38649987 | 38650094 | 38649987 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| chr2.3 | exon | 38651490 | 38651696 | 38651490 | ID=MS.gene84397.t1.exon7;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38651490 | 38651696 | 38651490 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| chr2.3 | exon | 38652194 | 38652478 | 38652194 | ID=MS.gene84397.t1.exon8;Parent=MS.gene84397.t1 |
| chr2.3 | CDS | 38652194 | 38652478 | 38652194 | ID=cds.MS.gene84397.t1;Parent=MS.gene84397.t1 |
| Gene Sequence |
| Protein sequence |
