Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85919.t1 | XP_024640918.1 | 96.4 | 333 | 12 | 0 | 1 | 333 | 1 | 333 | 1.70E-178 | 635.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85919.t1 | Q67Y99 | 65.8 | 336 | 102 | 4 | 1 | 329 | 1 | 330 | 1.4e-115 | 417.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85919.t1 | A0A396HXQ8 | 96.4 | 333 | 12 | 0 | 1 | 333 | 1 | 333 | 1.2e-178 | 635.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene85919 | 0.802222 | 6.21E-49 | -1.69E-46 |
| MS.gene049170 | MS.gene85919 | 0.801823 | 7.51E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene85919 | 0.805029 | 1.63E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene85919 | 0.808011 | 3.82E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene85919 | 0.808877 | 2.50E-50 | -1.69E-46 |
| MS.gene050315 | MS.gene85919 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene85919 | -0.817832 | 2.69E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene85919 | 0.824443 | 8.05E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene85919 | 0.821129 | 4.76E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene85919 | 0.805217 | 1.49E-49 | -1.69E-46 |
| MS.gene050625 | MS.gene85919 | 0.832732 | 7.99E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene85919 | 0.864882 | 8.83E-65 | -1.69E-46 |
| MS.gene050747 | MS.gene85919 | 0.829093 | 6.24E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene85919 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene85919 | 0.816781 | 4.63E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene85919 | 0.842745 | 2.14E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene85919 | 0.832298 | 1.02E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene85919 | 0.903693 | 2.67E-79 | -1.69E-46 |
| MS.gene051582 | MS.gene85919 | 0.878567 | 2.53E-69 | -1.69E-46 |
| MS.gene051588 | MS.gene85919 | 0.856049 | 4.18E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene85919 | -0.855932 | 4.53E-62 | -1.69E-46 |
| MS.gene052134 | MS.gene85919 | 0.838281 | 3.16E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene85919 | 0.833747 | 4.47E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene85919 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene85919 | 0.830662 | 2.59E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene85919 | 0.80745 | 5.03E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene85919 | 0.815591 | 8.55E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene85919 | 0.842177 | 3.03E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene85919 | 0.826212 | 3.07E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene85919 | 0.852448 | 4.59E-61 | -1.69E-46 |
| MS.gene052501 | MS.gene85919 | 0.837645 | 4.60E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene85919 | 0.861861 | 7.62E-64 | -1.69E-46 |
| MS.gene052982 | MS.gene85919 | 0.889334 | 2.66E-73 | -1.69E-46 |
| MS.gene053103 | MS.gene85919 | 0.817432 | 3.31E-52 | -1.69E-46 |
| MS.gene053330 | MS.gene85919 | 0.834646 | 2.66E-56 | -1.69E-46 |
| MS.gene053579 | MS.gene85919 | 0.8139 | 2.03E-51 | -1.69E-46 |
| MS.gene054102 | MS.gene85919 | 0.843376 | 1.46E-58 | -1.69E-46 |
| MS.gene054110 | MS.gene85919 | 0.842374 | 2.69E-58 | -1.69E-46 |
| MS.gene05413 | MS.gene85919 | 0.841906 | 3.58E-58 | -1.69E-46 |
| MS.gene054183 | MS.gene85919 | 0.822575 | 2.20E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene85919 | 0.873353 | 1.57E-67 | -1.69E-46 |
| MS.gene054917 | MS.gene85919 | 0.834841 | 2.37E-56 | -1.69E-46 |
| MS.gene054918 | MS.gene85919 | 0.826793 | 2.23E-54 | -1.69E-46 |
| MS.gene054920 | MS.gene85919 | 0.86861 | 5.74E-66 | -1.69E-46 |
| MS.gene054927 | MS.gene85919 | 0.83297 | 6.97E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene85919 | 0.853963 | 1.69E-61 | -1.69E-46 |
| MS.gene055369 | MS.gene85919 | 0.845365 | 4.25E-59 | -1.69E-46 |
| MS.gene055370 | MS.gene85919 | 0.823784 | 1.15E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene85919 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene055539 | MS.gene85919 | 0.829166 | 5.99E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene85919 | 0.85517 | 7.55E-62 | -1.69E-46 |
| MS.gene055744 | MS.gene85919 | 0.800767 | 1.24E-48 | -1.69E-46 |
| MS.gene05594 | MS.gene85919 | 0.802297 | 6.00E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene85919 | 0.805812 | 1.11E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene85919 | 0.828 | 1.15E-54 | -1.69E-46 |
| MS.gene056497 | MS.gene85919 | 0.806591 | 7.64E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene85919 | 0.804852 | 1.77E-49 | -1.69E-46 |
| MS.gene056514 | MS.gene85919 | 0.851172 | 1.06E-60 | -1.69E-46 |
| MS.gene056633 | MS.gene85919 | 0.80143 | 9.04E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene85919 | 0.813502 | 2.48E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene85919 | -0.803899 | 2.80E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene85919 | 0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene85919 | 0.80018 | 1.63E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene85919 | 0.843729 | 1.17E-58 | -1.69E-46 |
| MS.gene057310 | MS.gene85919 | 0.835917 | 1.27E-56 | -1.69E-46 |
| MS.gene057476 | MS.gene85919 | 0.808706 | 2.72E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene85919 | 0.818067 | 2.38E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene85919 | 0.820048 | 8.43E-53 | -1.69E-46 |
| MS.gene057825 | MS.gene85919 | 0.830631 | 2.63E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene85919 | 0.800182 | 1.62E-48 | -1.69E-46 |
| MS.gene058007 | MS.gene85919 | 0.820716 | 5.92E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene85919 | 0.833902 | 4.08E-56 | -1.69E-46 |
| MS.gene058233 | MS.gene85919 | 0.835753 | 1.40E-56 | -1.69E-46 |
| MS.gene058276 | MS.gene85919 | 0.803909 | 2.78E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene85919 | 0.837221 | 5.91E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene85919 | 0.868789 | 5.03E-66 | -1.69E-46 |
| MS.gene058700 | MS.gene85919 | 0.887615 | 1.22E-72 | -1.69E-46 |
| MS.gene05886 | MS.gene85919 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene059011 | MS.gene85919 | 0.807686 | 4.48E-50 | -1.69E-46 |
| MS.gene059141 | MS.gene85919 | 0.838737 | 2.41E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene85919 | 0.847372 | 1.21E-59 | -1.69E-46 |
| MS.gene059462 | MS.gene85919 | 0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene059683 | MS.gene85919 | 0.807321 | 5.35E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene85919 | 0.852259 | 5.19E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene85919 | 0.829853 | 4.08E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene85919 | 0.834913 | 2.28E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene85919 | 0.855209 | 7.36E-62 | -1.69E-46 |
| MS.gene060835 | MS.gene85919 | 0.801978 | 6.98E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene85919 | 0.806049 | 9.94E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene85919 | 0.813407 | 2.60E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene85919 | 0.854923 | 8.91E-62 | -1.69E-46 |
| MS.gene061159 | MS.gene85919 | 0.819572 | 1.08E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85919.t1 | MTR_5g043480 | 90.390 | 333 | 12 | 1 | 1 | 333 | 1 | 313 | 0.0 | 598 |
| MS.gene85919.t1 | MTR_5g043480 | 97.015 | 268 | 8 | 0 | 1 | 268 | 1 | 268 | 0.0 | 538 |
| MS.gene85919.t1 | MTR_5g043480 | 93.033 | 244 | 15 | 1 | 90 | 333 | 2 | 243 | 9.23e-159 | 444 |
| MS.gene85919.t1 | MTR_5g043480 | 92.737 | 179 | 11 | 1 | 90 | 268 | 2 | 178 | 4.66e-106 | 309 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85919.t1 | AT2G03390 | 65.774 | 336 | 102 | 4 | 1 | 329 | 1 | 330 | 1.28e-156 | 442 |
| MS.gene85919.t1 | AT2G03390 | 65.774 | 336 | 102 | 4 | 1 | 329 | 1 | 330 | 1.28e-156 | 442 |
| MS.gene85919.t1 | AT2G03390 | 76.018 | 221 | 52 | 1 | 109 | 329 | 1 | 220 | 3.70e-125 | 358 |
| MS.gene85919.t1 | AT2G03390 | 63.273 | 275 | 89 | 3 | 1 | 268 | 1 | 270 | 2.01e-115 | 335 |
| MS.gene85919.t1 | AT2G03390 | 63.273 | 275 | 89 | 3 | 1 | 268 | 1 | 270 | 2.01e-115 | 335 |
| MS.gene85919.t1 | AT2G03390 | 62.357 | 263 | 87 | 3 | 1 | 256 | 1 | 258 | 3.16e-107 | 314 |
| MS.gene85919.t1 | AT2G03390 | 62.357 | 263 | 87 | 3 | 1 | 256 | 1 | 258 | 3.16e-107 | 314 |
Find 62 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCCGCAGTTGCTTAAT+AGG | 0.261631 | 5.3:+31000930 | None:intergenic |
| TTGAAGAGTTTAGTGTTTAT+TGG | 0.264698 | 5.3:-31004175 | MS.gene85919:CDS |
| GTAATATGTGATCGTTTAAA+TGG | 0.273515 | 5.3:+31004235 | None:intergenic |
| TGAAGAGTTTAGTGTTTATT+GGG | 0.311579 | 5.3:-31004174 | MS.gene85919:CDS |
| AAGAGACTCTGCTTCAAGTT+TGG | 0.332003 | 5.3:+31002549 | None:intergenic |
| CCACTGGAAAACACTTGGTT+TGG | 0.357930 | 5.3:-31004207 | MS.gene85919:CDS |
| CTTACTTTGTCTGGTTTGTC+AGG | 0.359327 | 5.3:+31001094 | None:intergenic |
| ATAGATACACTTACTTTGTC+TGG | 0.374519 | 5.3:+31001085 | None:intergenic |
| TTCCCTCCATCTTCGTCACT+TGG | 0.379098 | 5.3:+31000870 | None:intergenic |
| GAAGCGGGATGGATGTTTAG+AGG | 0.384346 | 5.3:-31004112 | MS.gene85919:CDS |
| TCTCCCGCAGTTGCTTAATA+GGG | 0.393158 | 5.3:+31000931 | None:intergenic |
| GCACAATATGTCTTCCGCTT+GGG | 0.393631 | 5.3:-31002493 | MS.gene85919:CDS |
| CTTCTTTGCCTCGACACAAA+AGG | 0.407025 | 5.3:+31004148 | None:intergenic |
| AAAGTAAAGCATAAAATGTT+TGG | 0.407562 | 5.3:-31002466 | MS.gene85919:intron |
| TGCTGCATCAGCTAAAGCTT+TGG | 0.408060 | 5.3:-31002527 | MS.gene85919:CDS |
| CCTCCATCTTCGTCACTTGG+TGG | 0.409997 | 5.3:+31000873 | None:intergenic |
| TGTGGAAAGAGCAGAATCTA+TGG | 0.413201 | 5.3:-31004271 | MS.gene85919:CDS |
| CCATATGCCACCAGTAGATC+TGG | 0.419863 | 5.3:+31001774 | None:intergenic |
| GAACTTGATTCACTGCATAC+TGG | 0.426333 | 5.3:+31002239 | None:intergenic |
| TATGCAGTGAATCAAGTTCA+TGG | 0.439684 | 5.3:-31002235 | MS.gene85919:CDS |
| TAGAGGTGGAGAACAAGAGT+TGG | 0.460891 | 5.3:-31004095 | MS.gene85919:CDS |
| CTCTAAGTATTATACGTCTT+CGG | 0.463511 | 5.3:-31002895 | MS.gene85919:intron |
| TGCACAATATGTCTTCCGCT+TGG | 0.468704 | 5.3:-31002494 | MS.gene85919:CDS |
| GCTAATCAAACCTGATAAAA+CGG | 0.469627 | 5.3:+31002167 | None:intergenic |
| CTCCATCTTCGTCACTTGGT+GGG | 0.473073 | 5.3:+31000874 | None:intergenic |
| TTCTTTGCCTCGACACAAAA+GGG | 0.476325 | 5.3:+31004149 | None:intergenic |
| CCAGATCTACTGGTGGCATA+TGG | 0.477740 | 5.3:-31001774 | MS.gene85919:intron |
| TTCGTCACTTGGTGGGTCAA+AGG | 0.495368 | 5.3:+31000881 | None:intergenic |
| ATCTGCCACTGGAAAACACT+TGG | 0.501894 | 5.3:-31004212 | MS.gene85919:CDS |
| CACAATATGTCTTCCGCTTG+GGG | 0.503833 | 5.3:-31002492 | MS.gene85919:CDS |
| TCGTCACTTGGTGGGTCAAA+GGG | 0.504592 | 5.3:+31000882 | None:intergenic |
| TTCTATGGAATGGATTCAGC+TGG | 0.505006 | 5.3:-31000963 | MS.gene85919:CDS |
| GGATTTAGCCACAAGAGTGC+AGG | 0.509955 | 5.3:-31004011 | MS.gene85919:intron |
| ATCGCGTAATTTAGCAGCCA+AGG | 0.512546 | 5.3:+31002579 | None:intergenic |
| TAGAACAGAAAAGACATGTA+GGG | 0.523219 | 5.3:+31000981 | None:intergenic |
| CGAGAATGAAGATTATGCCT+TGG | 0.526531 | 5.3:-31002596 | MS.gene85919:CDS |
| TTTATCGAAGGTTGAAGAAG+AGG | 0.534000 | 5.3:-31002978 | MS.gene85919:intron |
| CATCCCTATTAAGCAACTGC+GGG | 0.535038 | 5.3:-31000934 | MS.gene85919:CDS |
| TGATCGTTTAAATGGCTCAA+AGG | 0.535551 | 5.3:+31004243 | None:intergenic |
| GCGTGCTGAACCAGATCTAC+TGG | 0.536734 | 5.3:-31001784 | MS.gene85919:CDS |
| TAGAGCTGTAATCGTAGGAA+TGG | 0.538085 | 5.3:-31002264 | MS.gene85919:CDS |
| CAGTGAATCAAGTTCATGGA+TGG | 0.538216 | 5.3:-31002231 | MS.gene85919:CDS |
| GTGGGTCAAAGGGTATTTCG+TGG | 0.539921 | 5.3:+31000892 | None:intergenic |
| GATCGTTTAAATGGCTCAAA+GGG | 0.543938 | 5.3:+31004244 | None:intergenic |
| ATAGAACAGAAAAGACATGT+AGG | 0.565791 | 5.3:+31000980 | None:intergenic |
| TCACATATTACATCTGCCAC+TGG | 0.578536 | 5.3:-31004223 | MS.gene85919:CDS |
| CATCTAAACCTGCACTCTTG+TGG | 0.582862 | 5.3:+31004003 | None:intergenic |
| GGCTATAGAGCTGTAATCGT+AGG | 0.584395 | 5.3:-31002269 | MS.gene85919:CDS |
| GACCCACCAAGTGACGAAGA+TGG | 0.585639 | 5.3:-31000876 | MS.gene85919:CDS |
| GCGGGATGGATGTTTAGAGG+TGG | 0.602771 | 5.3:-31004109 | MS.gene85919:CDS |
| CACCAAGTGACGAAGATGGA+GGG | 0.603276 | 5.3:-31000872 | MS.gene85919:CDS |
| TCAAAGGGTATTTCGTGGCG+CGG | 0.632604 | 5.3:+31000897 | None:intergenic |
| AGAACAGAAAAGACATGTAG+GGG | 0.640432 | 5.3:+31000982 | None:intergenic |
| CCACCAAGTGACGAAGATGG+AGG | 0.644237 | 5.3:-31000873 | MS.gene85919:CDS |
| TCATCCCTATTAAGCAACTG+CGG | 0.646965 | 5.3:-31000935 | MS.gene85919:CDS |
| ATGTCAGTGTGCTTTAAACA+TGG | 0.651748 | 5.3:-31003719 | MS.gene85919:intron |
| GCTTTACTTTCTGCCCCAAG+CGG | 0.652168 | 5.3:+31002479 | None:intergenic |
| TTGAGCACACTAGCAACATG+TGG | 0.672596 | 5.3:-31004289 | MS.gene85919:CDS |
| AACCTGATAAAACGGTTGAG+CGG | 0.677732 | 5.3:+31002175 | None:intergenic |
| TGCTGAACCAGATCTACTGG+TGG | 0.685041 | 5.3:-31001781 | MS.gene85919:CDS |
| CAAGTTAAGAAGTTGTCTCG+TGG | 0.688846 | 5.3:-31002200 | MS.gene85919:CDS |
| GCTGCGAAACAAACTTACTG+AGG | 0.697627 | 5.3:-31003674 | MS.gene85919:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAGTAATAATATTAAT+TGG | + | chr5.3:31003937-31003956 | None:intergenic | 10.0% |
| !! | ATGAATTGTAAATGTATTTA+TGG | - | chr5.3:31003241-31003260 | MS.gene85919:intron | 15.0% |
| !! | TACAATAACAAAAACATATA+AGG | + | chr5.3:31003281-31003300 | None:intergenic | 15.0% |
| !!! | AATAATATTAATTGGTTCAA+TGG | + | chr5.3:31003929-31003948 | None:intergenic | 15.0% |
| !!! | TGTTATTTATGTTCTTTAAT+TGG | - | chr5.3:31004131-31004150 | MS.gene85919:CDS | 15.0% |
| !!! | TTTGTTATTGTATTAATAAC+TGG | - | chr5.3:31003289-31003308 | MS.gene85919:intron | 15.0% |
| !! | AAAGTAAAGCATAAAATGTT+TGG | - | chr5.3:31002704-31002723 | MS.gene85919:intron | 20.0% |
| !! | AATCAAAATATAAGGATGAA+AGG | + | chr5.3:31002864-31002883 | None:intergenic | 20.0% |
| !! | ATTTCTTCATCATTTATTCT+AGG | - | chr5.3:31002302-31002321 | MS.gene85919:intron | 20.0% |
| !! | CTTTATATTGCAAGTAAATA+CGG | - | chr5.3:31001250-31001269 | MS.gene85919:intron | 20.0% |
| !! | TAAGCAAAAACAATCAAAAA+GGG | - | chr5.3:31002219-31002238 | MS.gene85919:CDS | 20.0% |
| !! | TAATTAGCAACATATTGATA+AGG | - | chr5.3:31002775-31002794 | MS.gene85919:intron | 20.0% |
| !! | TCTTCAATTCTTATTATTAC+TGG | - | chr5.3:31003129-31003148 | MS.gene85919:intron | 20.0% |
| !! | TGATAAATATTGTTTATCGA+AGG | - | chr5.3:31002180-31002199 | MS.gene85919:CDS | 20.0% |
| !! | TGCTTAGAGTTAAAATTATT+CGG | + | chr5.3:31003092-31003111 | None:intergenic | 20.0% |
| !! | TTAAGCAAAAACAATCAAAA+AGG | - | chr5.3:31002218-31002237 | MS.gene85919:CDS | 20.0% |
| !!! | AAACTTTGTTTTTTTGAACA+AGG | + | chr5.3:31002840-31002859 | None:intergenic | 20.0% |
| !!! | AAATGAAAATCACATTTTCT+CGG | - | chr5.3:31001918-31001937 | MS.gene85919:intron | 20.0% |
| !!! | ACTCAATATCTTTTATGTTA+CGG | - | chr5.3:31001313-31001332 | MS.gene85919:intron | 20.0% |
| !!! | ATAGTCTTATATACATAACA+TGG | - | chr5.3:31001201-31001220 | MS.gene85919:intron | 20.0% |
| !!! | GACTAGAATGATTTTATATT+AGG | + | chr5.3:31001851-31001870 | None:intergenic | 20.0% |
| !!! | TAATAATTTGTCGTATTGAT+AGG | + | chr5.3:31002748-31002767 | None:intergenic | 20.0% |
| !!! | TGAATTATTCTGTTTCTATA+TGG | - | chr5.3:31003050-31003069 | MS.gene85919:intron | 20.0% |
| !!! | TTTATCATGGTTTTAAATTG+TGG | + | chr5.3:31001358-31001377 | None:intergenic | 20.0% |
| ! | AACCATGATAAATAGTTAAG+TGG | - | chr5.3:31001366-31001385 | MS.gene85919:intron | 25.0% |
| ! | AAGCAAAAACAATCAAAAAG+GGG | - | chr5.3:31002220-31002239 | MS.gene85919:CDS | 25.0% |
| ! | ATGAAATTATTCATCCAAAC+AGG | + | chr5.3:31003441-31003460 | None:intergenic | 25.0% |
| ! | CGTATTTACTTGCAATATAA+AGG | + | chr5.3:31001252-31001271 | None:intergenic | 25.0% |
| ! | GTAATATGTGATCGTTTAAA+TGG | + | chr5.3:31000938-31000957 | None:intergenic | 25.0% |
| ! | TACTAAATGTTGTCAAATAG+TGG | - | chr5.3:31001720-31001739 | MS.gene85919:intron | 25.0% |
| ! | TATAAGAAAACAGTTTGACT+TGG | + | chr5.3:31003626-31003645 | None:intergenic | 25.0% |
| ! | TCAATTCTTATTATTACTGG+TGG | - | chr5.3:31003132-31003151 | MS.gene85919:intron | 25.0% |
| ! | TGAAATTATTCATCCAAACA+GGG | + | chr5.3:31003440-31003459 | None:intergenic | 25.0% |
| ! | TGAAGAGTTTAGTGTTTATT+GGG | - | chr5.3:31000996-31001015 | MS.gene85919:CDS | 25.0% |
| ! | TTCTTAATGCTTCATTTGTT+TGG | - | chr5.3:31001419-31001438 | MS.gene85919:intron | 25.0% |
| ! | TTGAAGAGTTTAGTGTTTAT+TGG | - | chr5.3:31000995-31001014 | MS.gene85919:CDS | 25.0% |
| !! | AATATAATGTGAGACTGTTT+TGG | + | chr5.3:31003742-31003761 | None:intergenic | 25.0% |
| !! | ATAAGAAAACAGTTTGACTT+GGG | + | chr5.3:31003625-31003644 | None:intergenic | 25.0% |
| !! | TTCAGATCATCTAATTTTTC+TGG | - | chr5.3:31002126-31002145 | MS.gene85919:intron | 25.0% |
| !!! | TCATCTAATTTTTCTGGTAT+TGG | - | chr5.3:31002132-31002151 | MS.gene85919:intron | 25.0% |
| AGAACCTAGACATTTGAAAA+AGG | + | chr5.3:31003357-31003376 | None:intergenic | 30.0% | |
| ATAGAACAGAAAAGACATGT+AGG | + | chr5.3:31004193-31004212 | None:intergenic | 30.0% | |
| ATAGATACACTTACTTTGTC+TGG | + | chr5.3:31004088-31004107 | None:intergenic | 30.0% | |
| ATCTGAAAACATATACACGA+AGG | + | chr5.3:31002113-31002132 | None:intergenic | 30.0% | |
| ATGGAGGAAAGACAAAAAAT+CGG | + | chr5.3:31002478-31002497 | None:intergenic | 30.0% | |
| CACCACTTAACTATTTATCA+TGG | + | chr5.3:31001371-31001390 | None:intergenic | 30.0% | |
| CAGTCTCACATTATATTTGA+TGG | - | chr5.3:31003745-31003764 | MS.gene85919:intron | 30.0% | |
| CATCGAGGAATCAAAATATA+AGG | + | chr5.3:31002872-31002891 | None:intergenic | 30.0% | |
| CATTCTAGTCAAATGAAGTT+TGG | - | chr5.3:31001861-31001880 | MS.gene85919:intron | 30.0% | |
| CTCTAAGTATTATACGTCTT+CGG | - | chr5.3:31002275-31002294 | MS.gene85919:intron | 30.0% | |
| CTTATGGAAAAAGCTGAAAA+CGG | - | chr5.3:31003681-31003700 | MS.gene85919:CDS | 30.0% | |
| GAACCTAGACATTTGAAAAA+GGG | + | chr5.3:31003356-31003375 | None:intergenic | 30.0% | |
| GCTAATCAAACCTGATAAAA+CGG | + | chr5.3:31003006-31003025 | None:intergenic | 30.0% | |
| GGATACAATAACAGTATTAG+TGG | + | chr5.3:31001535-31001554 | None:intergenic | 30.0% | |
| TAATTGTTCAGACCTTTGAT+TGG | - | chr5.3:31003327-31003346 | MS.gene85919:intron | 30.0% | |
| TAGAACAGAAAAGACATGTA+GGG | + | chr5.3:31004192-31004211 | None:intergenic | 30.0% | |
| TAGACACTATGTAACAACAT+TGG | + | chr5.3:31001632-31001651 | None:intergenic | 30.0% | |
| TCTGAAAACATATACACGAA+GGG | + | chr5.3:31002112-31002131 | None:intergenic | 30.0% | |
| ! | AAAAGTATATGTGCGTGTTT+GGG | + | chr5.3:31001976-31001995 | None:intergenic | 30.0% |
| ! | AAGTTATTCTAGAGAGCTTA+TGG | - | chr5.3:31003665-31003684 | MS.gene85919:intron | 30.0% |
| ! | TACATGTCTTTTCTGTTCTA+TGG | - | chr5.3:31004192-31004211 | MS.gene85919:CDS | 30.0% |
| !! | AACTCAGCTATTTTCACATT+TGG | + | chr5.3:31002392-31002411 | None:intergenic | 30.0% |
| !! | TTATCAGGTTTGATTAGCTT+CGG | - | chr5.3:31003008-31003027 | MS.gene85919:intron | 30.0% |
| !!! | AAGTAGTTTTAAGGTTGAAG+CGG | - | chr5.3:31001042-31001061 | MS.gene85919:intron | 30.0% |
| !!! | CACAAACAACTTGTTACTTT+TGG | - | chr5.3:31003793-31003812 | MS.gene85919:intron | 30.0% |
| !!! | CTTGATGTTGTTTTTTCAAC+TGG | - | chr5.3:31001138-31001157 | MS.gene85919:intron | 30.0% |
| !!! | CTTTGTTTTTTTGAACAAGG+AGG | + | chr5.3:31002837-31002856 | None:intergenic | 30.0% |
| !!! | TACTTTTCAAGTTGTGTCAA+TGG | - | chr5.3:31001989-31002008 | MS.gene85919:intron | 30.0% |
| !!! | TTTCCCTTTTTCAAATGTCT+AGG | - | chr5.3:31003350-31003369 | MS.gene85919:intron | 30.0% |
| !!! | TTTTTTTGAACAAGGAGGAA+AGG | + | chr5.3:31002832-31002851 | None:intergenic | 30.0% |
| AAGCTGACCAACAGATTATA+TGG | + | chr5.3:31002497-31002516 | None:intergenic | 35.0% | |
| AAGGCTGAATATCTCAAATG+TGG | - | chr5.3:31002794-31002813 | MS.gene85919:intron | 35.0% | |
| ACGTTGTCAATCACAAATTG+CGG | + | chr5.3:31001775-31001794 | None:intergenic | 35.0% | |
| AGAACAGAAAAGACATGTAG+GGG | + | chr5.3:31004191-31004210 | None:intergenic | 35.0% | |
| AGGCTGAATATCTCAAATGT+GGG | - | chr5.3:31002795-31002814 | MS.gene85919:intron | 35.0% | |
| AGTGATTAAGTGTGTGTGTT+TGG | - | chr5.3:31002338-31002357 | MS.gene85919:intron | 35.0% | |
| AGTGTCTATACGTTACAACA+TGG | - | chr5.3:31001644-31001663 | MS.gene85919:intron | 35.0% | |
| ATGAAGTTCCATGTTGTTCT+TGG | - | chr5.3:31003978-31003997 | MS.gene85919:intron | 35.0% | |
| CAATTTGTGATTGACAACGT+TGG | - | chr5.3:31001775-31001794 | MS.gene85919:CDS | 35.0% | |
| CTTTCCTCCATATAATCTGT+TGG | - | chr5.3:31002487-31002506 | MS.gene85919:CDS | 35.0% | |
| GAAAAAGGGAAACCAATCAA+AGG | + | chr5.3:31003342-31003361 | None:intergenic | 35.0% | |
| GAAAGAAACCAAGAACAACA+TGG | + | chr5.3:31003989-31004008 | None:intergenic | 35.0% | |
| GATCGTTTAAATGGCTCAAA+GGG | + | chr5.3:31000929-31000948 | None:intergenic | 35.0% | |
| GGTTCAATGGTAAATGTAAC+TGG | + | chr5.3:31003916-31003935 | None:intergenic | 35.0% | |
| GTGCTTTATAACTGTTTCCA+GGG | - | chr5.3:31004153-31004172 | MS.gene85919:CDS | 35.0% | |
| TATGCAGTGAATCAAGTTCA+TGG | - | chr5.3:31002935-31002954 | MS.gene85919:CDS | 35.0% | |
| TCACAAATTGCGGAAAATAG+AGG | + | chr5.3:31001765-31001784 | None:intergenic | 35.0% | |
| TGATCGTTTAAATGGCTCAA+AGG | + | chr5.3:31000930-31000949 | None:intergenic | 35.0% | |
| TTTATCGAAGGTTGAAGAAG+AGG | - | chr5.3:31002192-31002211 | MS.gene85919:CDS | 35.0% | |
| ! | ATGTCAGTGTGCTTTAAACA+TGG | - | chr5.3:31001451-31001470 | MS.gene85919:intron | 35.0% |
| ! | ATTTTCACATTTGGATGCTC+TGG | + | chr5.3:31002383-31002402 | None:intergenic | 35.0% |
| ! | GAAAAGTATATGTGCGTGTT+TGG | + | chr5.3:31001977-31001996 | None:intergenic | 35.0% |
| ! | GTCTTTTCTGTTCTATGGAA+TGG | - | chr5.3:31004197-31004216 | MS.gene85919:CDS | 35.0% |
| ! | TGAAAATCACATTTTCTCGG+AGG | - | chr5.3:31001921-31001940 | MS.gene85919:intron | 35.0% |
| ! | TGAGTTGAACTGATGTTTGA+GGG | - | chr5.3:31002406-31002425 | MS.gene85919:intron | 35.0% |
| !! | ATGTACAGAAAAGCACTTGT+AGG | + | chr5.3:31003873-31003892 | None:intergenic | 35.0% |
| !! | CATAACATGGCTTTAGATTG+AGG | - | chr5.3:31001214-31001233 | MS.gene85919:intron | 35.0% |
| !! | GAGGCAAAGAAGTAGTTTTA+AGG | - | chr5.3:31001033-31001052 | MS.gene85919:intron | 35.0% |
| !!! | AGTAGTTTTAAGGTTGAAGC+GGG | - | chr5.3:31001043-31001062 | MS.gene85919:intron | 35.0% |
| AACCTGATAAAACGGTTGAG+CGG | + | chr5.3:31002998-31003017 | None:intergenic | 40.0% | |
| AACCTGCAGAATAGATCATC+AGG | - | chr5.3:31003161-31003180 | MS.gene85919:intron | 40.0% | |
| AACTTCATACCACAGAAACC+AGG | + | chr5.3:31003966-31003985 | None:intergenic | 40.0% | |
| ATCGAACCTAAGACCTTATG+AGG | - | chr5.3:31003584-31003603 | MS.gene85919:intron | 40.0% | |
| ATCTGAACTGCAAGCGAAAT+TGG | + | chr5.3:31002540-31002559 | None:intergenic | 40.0% | |
| CAAGTTAAGAAGTTGTCTCG+TGG | - | chr5.3:31002970-31002989 | MS.gene85919:CDS | 40.0% | |
| CAGTGAATCAAGTTCATGGA+TGG | - | chr5.3:31002939-31002958 | MS.gene85919:CDS | 40.0% | |
| CGAGAATGAAGATTATGCCT+TGG | - | chr5.3:31002574-31002593 | MS.gene85919:CDS | 40.0% | |
| CTCTCGATAACTTGAATCGA+TGG | - | chr5.3:31002063-31002082 | MS.gene85919:intron | 40.0% | |
| CTGACCAACAGATTATATGG+AGG | + | chr5.3:31002494-31002513 | None:intergenic | 40.0% | |
| GAACTTGATTCACTGCATAC+TGG | + | chr5.3:31002934-31002953 | None:intergenic | 40.0% | |
| GAGTTGAACTGATGTTTGAG+GGG | - | chr5.3:31002407-31002426 | MS.gene85919:intron | 40.0% | |
| GGTGCTTTATAACTGTTTCC+AGG | - | chr5.3:31004152-31004171 | MS.gene85919:CDS | 40.0% | |
| GTGTGTGTTTGGTTATGCAT+TGG | - | chr5.3:31002349-31002368 | MS.gene85919:intron | 40.0% | |
| TAAACACAATCCACATGGCT+TGG | + | chr5.3:31001562-31001581 | None:intergenic | 40.0% | |
| TAGAGCTGTAATCGTAGGAA+TGG | - | chr5.3:31002906-31002925 | MS.gene85919:CDS | 40.0% | |
| TATTACTTTGTTCGCGTTCC+TGG | - | chr5.3:31003945-31003964 | MS.gene85919:intron | 40.0% | |
| TCACATATTACATCTGCCAC+TGG | - | chr5.3:31000947-31000966 | MS.gene85919:CDS | 40.0% | |
| TCATCCCTATTAAGCAACTG+CGG | - | chr5.3:31004235-31004254 | MS.gene85919:CDS | 40.0% | |
| TGAATCGATGGCAAGTGTAT+TGG | - | chr5.3:31002075-31002094 | MS.gene85919:intron | 40.0% | |
| TGTGGAAAGAGCAGAATCTA+TGG | - | chr5.3:31000899-31000918 | MS.gene85919:CDS | 40.0% | |
| TGTGTTCCTCATAAGGTCTT+AGG | + | chr5.3:31003593-31003612 | None:intergenic | 40.0% | |
| TTCTTTGCCTCGACACAAAA+GGG | + | chr5.3:31001024-31001043 | None:intergenic | 40.0% | |
| ! | AAGAGACTCTGCTTCAAGTT+TGG | + | chr5.3:31002624-31002643 | None:intergenic | 40.0% |
| ! | ATTCAAGTTATCGAGAGGCT+AGG | + | chr5.3:31002060-31002079 | None:intergenic | 40.0% |
| ! | CTGAGTTGAACTGATGTTTG+AGG | - | chr5.3:31002405-31002424 | MS.gene85919:intron | 40.0% |
| ! | CTTACTTTGTCTGGTTTGTC+AGG | + | chr5.3:31004079-31004098 | None:intergenic | 40.0% |
| ! | TTCAAGTTATCGAGAGGCTA+GGG | + | chr5.3:31002059-31002078 | None:intergenic | 40.0% |
| ! | TTCTATGGAATGGATTCAGC+TGG | - | chr5.3:31004207-31004226 | MS.gene85919:CDS | 40.0% |
| !! | CATCGATTCAAGTTATCGAG+AGG | + | chr5.3:31002065-31002084 | None:intergenic | 40.0% |
| ATCGCGTAATTTAGCAGCCA+AGG | + | chr5.3:31002594-31002613 | None:intergenic | 45.0% | |
| ATCTGCCACTGGAAAACACT+TGG | - | chr5.3:31000958-31000977 | MS.gene85919:CDS | 45.0% | |
| CACAATATGTCTTCCGCTTG+GGG | - | chr5.3:31002678-31002697 | MS.gene85919:intron | 45.0% | |
| CATCCCTATTAAGCAACTGC+GGG | - | chr5.3:31004236-31004255 | MS.gene85919:CDS | 45.0% | |
| CATCTAAACCTGCACTCTTG+TGG | + | chr5.3:31001170-31001189 | None:intergenic | 45.0% | |
| CCACTGGAAAACACTTGGTT+TGG | - | chr5.3:31000963-31000982 | MS.gene85919:CDS | 45.0% | |
| CCTGGTAAACACAATCCACA+TGG | + | chr5.3:31001567-31001586 | None:intergenic | 45.0% | |
| CTGGATTACTAAGCCCTGTT+TGG | - | chr5.3:31003424-31003443 | MS.gene85919:intron | 45.0% | |
| CTTATGAGGAACACACTCCA+AGG | - | chr5.3:31003598-31003617 | MS.gene85919:intron | 45.0% | |
| CTTCTTTGCCTCGACACAAA+AGG | + | chr5.3:31001025-31001044 | None:intergenic | 45.0% | |
| CTTGGAGTGTGTTCCTCATA+AGG | + | chr5.3:31003600-31003619 | None:intergenic | 45.0% | |
| GAGAGGCTAGGGTCATAAAA+GGG | + | chr5.3:31002048-31002067 | None:intergenic | 45.0% | |
| GCACAATATGTCTTCCGCTT+GGG | - | chr5.3:31002677-31002696 | MS.gene85919:intron | 45.0% | |
| GCTGCGAAACAAACTTACTG+AGG | - | chr5.3:31001496-31001515 | MS.gene85919:intron | 45.0% | |
| GGCTATAGAGCTGTAATCGT+AGG | - | chr5.3:31002901-31002920 | MS.gene85919:CDS | 45.0% | |
| GTATCCTATACCAAGCCATG+TGG | - | chr5.3:31001549-31001568 | MS.gene85919:intron | 45.0% | |
| GTGCGTGTTTGGGTAAATGA+CGG | + | chr5.3:31001966-31001985 | None:intergenic | 45.0% | |
| TAAAACAAGCTCACTCGAGC+TGG | - | chr5.3:31002452-31002471 | MS.gene85919:intron | 45.0% | |
| TAGAGGTGGAGAACAAGAGT+TGG | - | chr5.3:31001075-31001094 | MS.gene85919:intron | 45.0% | |
| TCTCCCGCAGTTGCTTAATA+GGG | + | chr5.3:31004242-31004261 | None:intergenic | 45.0% | |
| TGAACTGATGTTTGAGGGGT+TGG | - | chr5.3:31002411-31002430 | MS.gene85919:intron | 45.0% | |
| TGCACAATATGTCTTCCGCT+TGG | - | chr5.3:31002676-31002695 | MS.gene85919:intron | 45.0% | |
| TGCCTGATGATCTATTCTGC+AGG | + | chr5.3:31003166-31003185 | None:intergenic | 45.0% | |
| TGCGTGTTTGGGTAAATGAC+GGG | + | chr5.3:31001965-31001984 | None:intergenic | 45.0% | |
| TGCTGCATCAGCTAAAGCTT+TGG | - | chr5.3:31002643-31002662 | MS.gene85919:intron | 45.0% | |
| TTACAGCTCTATAGCCTGCA+CGG | + | chr5.3:31002897-31002916 | None:intergenic | 45.0% | |
| TTATGTTACGGCCGCAATTG+TGG | - | chr5.3:31001325-31001344 | MS.gene85919:intron | 45.0% | |
| TTCTCCCGCAGTTGCTTAAT+AGG | + | chr5.3:31004243-31004262 | None:intergenic | 45.0% | |
| TTGAGCACACTAGCAACATG+TGG | - | chr5.3:31000881-31000900 | MS.gene85919:CDS | 45.0% | |
| ! | ATTCTCCCTGGTGCCAATTT+CGG | + | chr5.3:31003566-31003585 | None:intergenic | 45.0% |
| ! | CCAAACCAAGTGTTTTCCAG+TGG | + | chr5.3:31000966-31000985 | None:intergenic | 45.0% |
| ! | CCATGTGGATTGTGTTTACC+AGG | - | chr5.3:31001564-31001583 | MS.gene85919:intron | 45.0% |
| ! | TACCGCTCAACCGTTTTATC+AGG | - | chr5.3:31002993-31003012 | MS.gene85919:intron | 45.0% |
| ! | TCGATGGCAAGTGTATTGGT+CGG | - | chr5.3:31002079-31002098 | MS.gene85919:intron | 45.0% |
| !! | AACAGTTTGACTTGGGACCT+TGG | + | chr5.3:31003618-31003637 | None:intergenic | 45.0% |
| !! | CAATCCACATGGCTTGGTAT+AGG | + | chr5.3:31001556-31001575 | None:intergenic | 45.0% |
| !!! | GTTTTAAGGTTGAAGCGGGA+TGG | - | chr5.3:31001047-31001066 | MS.gene85919:intron | 45.0% |
| AGGGGTGATCAAATCTTCCC+TGG | + | chr5.3:31004173-31004192 | None:intergenic | 50.0% | |
| CACACACACCTACTTCGAGT+AGG | + | chr5.3:31001590-31001609 | None:intergenic | 50.0% | |
| CACCAAGTGACGAAGATGGA+GGG | - | chr5.3:31004298-31004317 | MS.gene85919:CDS | 50.0% | |
| CCAAACTAGCCCACCGAAAT+TGG | - | chr5.3:31003550-31003569 | MS.gene85919:intron | 50.0% | |
| CCAGATCTACTGGTGGCATA+TGG | - | chr5.3:31003396-31003415 | MS.gene85919:intron | 50.0% | |
| CCATATGCCACCAGTAGATC+TGG | + | chr5.3:31003399-31003418 | None:intergenic | 50.0% | |
| CGAGAGGCTAGGGTCATAAA+AGG | + | chr5.3:31002049-31002068 | None:intergenic | 50.0% | |
| CGGCTGTGCAGTTGAAATTG+CGG | - | chr5.3:31001270-31001289 | MS.gene85919:intron | 50.0% | |
| CTCCATCTTCGTCACTTGGT+GGG | + | chr5.3:31004299-31004318 | None:intergenic | 50.0% | |
| CTCCTCTGCAACTGCAAAAG+AGG | + | chr5.3:31004044-31004063 | None:intergenic | 50.0% | |
| CTGGTGGCATATGGTAAAGC+TGG | - | chr5.3:31003405-31003424 | MS.gene85919:intron | 50.0% | |
| GAAGCGGGATGGATGTTTAG+AGG | - | chr5.3:31001058-31001077 | MS.gene85919:intron | 50.0% | |
| GCGTGTTTGGGTAAATGACG+GGG | + | chr5.3:31001964-31001983 | None:intergenic | 50.0% | |
| GCTTTACTTTCTGCCCCAAG+CGG | + | chr5.3:31002694-31002713 | None:intergenic | 50.0% | |
| GTCTTAGGTTCGATTCTCCC+TGG | + | chr5.3:31003578-31003597 | None:intergenic | 50.0% | |
| GTGGTCTGCAACCACAATTG+CGG | + | chr5.3:31001339-31001358 | None:intergenic | 50.0% | |
| TGCTGAACCAGATCTACTGG+TGG | - | chr5.3:31003389-31003408 | MS.gene85919:intron | 50.0% | |
| TTACCAGGCCTACTCGAAGT+AGG | - | chr5.3:31001579-31001598 | MS.gene85919:intron | 50.0% | |
| TTCCCTCCATCTTCGTCACT+TGG | + | chr5.3:31004303-31004322 | None:intergenic | 50.0% | |
| ! | CTCCTCTTTTGCAGTTGCAG+AGG | - | chr5.3:31004039-31004058 | MS.gene85919:CDS | 50.0% |
| ! | GGATTTAGCCACAAGAGTGC+AGG | - | chr5.3:31001159-31001178 | MS.gene85919:intron | 50.0% |
| ! | TCGTCACTTGGTGGGTCAAA+GGG | + | chr5.3:31004291-31004310 | None:intergenic | 50.0% |
| ! | TTCGTCACTTGGTGGGTCAA+AGG | + | chr5.3:31004292-31004311 | None:intergenic | 50.0% |
| ! | TTGGGTACCCTTTTGTGTCG+AGG | - | chr5.3:31001014-31001033 | MS.gene85919:intron | 50.0% |
| !! | CCAATTTCGGTGGGCTAGTT+TGG | + | chr5.3:31003553-31003572 | None:intergenic | 50.0% |
| !! | GTGGGTCAAAGGGTATTTCG+TGG | + | chr5.3:31004281-31004300 | None:intergenic | 50.0% |
| !! | TCAAAGGGTATTTCGTGGCG+CGG | + | chr5.3:31004276-31004295 | None:intergenic | 50.0% |
| ACACCTACTTCGAGTAGGCC+TGG | + | chr5.3:31001585-31001604 | None:intergenic | 55.0% | |
| ATAGCCTGCACGGTACATCG+AGG | + | chr5.3:31002887-31002906 | None:intergenic | 55.0% | |
| CCACCAAGTGACGAAGATGG+AGG | - | chr5.3:31004297-31004316 | MS.gene85919:CDS | 55.0% | |
| CCTCCATCTTCGTCACTTGG+TGG | + | chr5.3:31004300-31004319 | None:intergenic | 55.0% | |
| GACCCACCAAGTGACGAAGA+TGG | - | chr5.3:31004294-31004313 | MS.gene85919:CDS | 55.0% | |
| GATTCCTCGATGTACCGTGC+AGG | - | chr5.3:31002880-31002899 | MS.gene85919:intron | 55.0% | |
| GCGGGATGGATGTTTAGAGG+TGG | - | chr5.3:31001061-31001080 | MS.gene85919:intron | 55.0% | |
| GCGTGCTGAACCAGATCTAC+TGG | - | chr5.3:31003386-31003405 | MS.gene85919:intron | 55.0% | |
| GTTCGCGTTCCTGGTTTCTG+TGG | - | chr5.3:31003954-31003973 | MS.gene85919:intron | 55.0% | |
| TTGCGGTTGCGATGCTGATG+TGG | - | chr5.3:31001287-31001306 | MS.gene85919:intron | 55.0% | |
| ! | TCCCTGGTGCCAATTTCGGT+GGG | + | chr5.3:31003562-31003581 | None:intergenic | 55.0% |
| AGCCCACCGAAATTGGCACC+AGG | - | chr5.3:31003557-31003576 | MS.gene85919:intron | 60.0% | |
| GCCCACCGAAATTGGCACCA+GGG | - | chr5.3:31003558-31003577 | MS.gene85919:intron | 60.0% | |
| ! | CTCCCTGGTGCCAATTTCGG+TGG | + | chr5.3:31003563-31003582 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 31000863 | 31004329 | 31000863 | ID=MS.gene85919 |
| chr5.3 | mRNA | 31000863 | 31004329 | 31000863 | ID=MS.gene85919.t1;Parent=MS.gene85919 |
| chr5.3 | exon | 31004012 | 31004329 | 31004012 | ID=MS.gene85919.t1.exon1;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31004012 | 31004329 | 31004012 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| chr5.3 | exon | 31003675 | 31003734 | 31003675 | ID=MS.gene85919.t1.exon2;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31003675 | 31003734 | 31003675 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| chr5.3 | exon | 31002896 | 31002990 | 31002896 | ID=MS.gene85919.t1.exon3;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31002896 | 31002990 | 31002896 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| chr5.3 | exon | 31002467 | 31002639 | 31002467 | ID=MS.gene85919.t1.exon4;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31002467 | 31002639 | 31002467 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| chr5.3 | exon | 31002178 | 31002290 | 31002178 | ID=MS.gene85919.t1.exon5;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31002178 | 31002290 | 31002178 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| chr5.3 | exon | 31001775 | 31001820 | 31001775 | ID=MS.gene85919.t1.exon6;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31001775 | 31001820 | 31001775 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| chr5.3 | exon | 31001099 | 31001139 | 31001099 | ID=MS.gene85919.t1.exon7;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31001099 | 31001139 | 31001099 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| chr5.3 | exon | 31000863 | 31001018 | 31000863 | ID=MS.gene85919.t1.exon8;Parent=MS.gene85919.t1 |
| chr5.3 | CDS | 31000863 | 31001018 | 31000863 | ID=cds.MS.gene85919.t1;Parent=MS.gene85919.t1 |
| Gene Sequence |
| Protein sequence |
