Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96754.t1 | XP_003591063.1 | 86.1 | 252 | 28 | 5 | 1 | 249 | 1 | 248 | 2.50E-105 | 391.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96754.t1 | G7I7H8 | 86.1 | 252 | 28 | 5 | 1 | 249 | 1 | 248 | 1.8e-105 | 391.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene96754 | 0.823952 | 1.05E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene96754 | 0.80514 | 1.54E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene96754 | 0.821435 | 4.04E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene96754 | 0.844111 | 9.25E-59 | -1.69E-46 |
| MS.gene049491 | MS.gene96754 | 0.808966 | 2.39E-50 | -1.69E-46 |
| MS.gene049614 | MS.gene96754 | 0.850628 | 1.50E-60 | -1.69E-46 |
| MS.gene049661 | MS.gene96754 | 0.811696 | 6.15E-51 | -1.69E-46 |
| MS.gene049760 | MS.gene96754 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene96754 | 0.817321 | 3.50E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene96754 | 0.867754 | 1.08E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene96754 | 0.818509 | 1.89E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene96754 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene96754 | 0.835695 | 1.44E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene96754 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene050475 | MS.gene96754 | -0.822498 | 2.29E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene96754 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene05053 | MS.gene96754 | 0.800819 | 1.20E-48 | -1.69E-46 |
| MS.gene050541 | MS.gene96754 | -0.81888 | 1.56E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene96754 | 0.886058 | 4.76E-72 | -1.69E-46 |
| MS.gene050770 | MS.gene96754 | 0.888823 | 4.19E-73 | -1.69E-46 |
| MS.gene050812 | MS.gene96754 | 0.806441 | 8.21E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene96754 | 0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene96754 | 0.849624 | 2.87E-60 | -1.69E-46 |
| MS.gene051228 | MS.gene96754 | 0.833754 | 4.45E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene96754 | 0.85919 | 4.91E-63 | -1.69E-46 |
| MS.gene051666 | MS.gene96754 | 0.801075 | 1.07E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene96754 | 0.854167 | 1.47E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene96754 | 0.83229 | 1.03E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene96754 | 0.872366 | 3.36E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene96754 | 0.847309 | 1.25E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene96754 | 0.854885 | 9.14E-62 | -1.69E-46 |
| MS.gene052379 | MS.gene96754 | 0.862682 | 4.26E-64 | -1.69E-46 |
| MS.gene053009 | MS.gene96754 | 0.814178 | 1.76E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene96754 | 0.828452 | 8.92E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene96754 | 0.812415 | 4.29E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene96754 | 0.872286 | 3.57E-67 | -1.69E-46 |
| MS.gene053384 | MS.gene96754 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene96754 | 0.812192 | 4.80E-51 | -1.69E-46 |
| MS.gene053915 | MS.gene96754 | 0.822339 | 2.50E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene96754 | 0.825673 | 4.12E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene96754 | 0.87855 | 2.56E-69 | -1.69E-46 |
| MS.gene054642 | MS.gene96754 | 0.809311 | 2.02E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene96754 | 0.893499 | 5.94E-75 | -1.69E-46 |
| MS.gene054803 | MS.gene96754 | 0.892772 | 1.17E-74 | -1.69E-46 |
| MS.gene054804 | MS.gene96754 | 0.896204 | 4.62E-76 | -1.69E-46 |
| MS.gene055254 | MS.gene96754 | 0.885828 | 5.81E-72 | -1.69E-46 |
| MS.gene055277 | MS.gene96754 | 0.848722 | 5.11E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene96754 | 0.889223 | 2.93E-73 | -1.69E-46 |
| MS.gene055412 | MS.gene96754 | 0.833828 | 4.26E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene96754 | 0.817976 | 2.49E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene96754 | 0.805268 | 1.45E-49 | -1.69E-46 |
| MS.gene055497 | MS.gene96754 | -0.824343 | 8.50E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene96754 | 0.871274 | 7.74E-67 | -1.69E-46 |
| MS.gene055636 | MS.gene96754 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene055638 | MS.gene96754 | 0.822621 | 2.15E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene96754 | 0.801104 | 1.05E-48 | -1.69E-46 |
| MS.gene055896 | MS.gene96754 | 0.851773 | 7.13E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene96754 | 0.820792 | 5.69E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene96754 | 0.849727 | 2.69E-60 | -1.69E-46 |
| MS.gene056612 | MS.gene96754 | 0.800533 | 1.38E-48 | -1.69E-46 |
| MS.gene056903 | MS.gene96754 | 0.830249 | 3.27E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene96754 | 0.834196 | 3.45E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene96754 | 0.829613 | 4.67E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene96754 | 0.880767 | 4.19E-70 | -1.69E-46 |
| MS.gene057146 | MS.gene96754 | 0.819425 | 1.17E-52 | -1.69E-46 |
| MS.gene057246 | MS.gene96754 | 0.822375 | 2.45E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene96754 | 0.858223 | 9.55E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene96754 | 0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene058019 | MS.gene96754 | 0.805697 | 1.18E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene96754 | 0.808108 | 3.64E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene96754 | 0.843068 | 1.76E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene96754 | 0.85003 | 2.21E-60 | -1.69E-46 |
| MS.gene058903 | MS.gene96754 | 0.808403 | 3.15E-50 | -1.69E-46 |
| MS.gene058993 | MS.gene96754 | 0.803943 | 2.74E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene96754 | 0.843336 | 1.49E-58 | -1.69E-46 |
| MS.gene059536 | MS.gene96754 | 0.823629 | 1.25E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene96754 | 0.822716 | 2.04E-53 | -1.69E-46 |
| MS.gene05959 | MS.gene96754 | 0.822185 | 2.71E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene96754 | 0.828943 | 6.79E-55 | -1.69E-46 |
| MS.gene059708 | MS.gene96754 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene059858 | MS.gene96754 | 0.818351 | 2.05E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene96754 | 0.837411 | 5.28E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene96754 | 0.901065 | 3.90E-78 | -1.69E-46 |
| MS.gene060818 | MS.gene96754 | 0.847669 | 9.99E-60 | -1.69E-46 |
| MS.gene061041 | MS.gene96754 | 0.833239 | 5.98E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene96754 | 0.807708 | 4.43E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene96754 | 0.877342 | 6.78E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96754.t1 | MTR_1g082430 | 93.651 | 252 | 9 | 5 | 1 | 249 | 1 | 248 | 1.18e-165 | 457 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96754.t1 | AT5G27390 | 49.802 | 253 | 111 | 5 | 1 | 249 | 1 | 241 | 2.89e-77 | 234 |
| MS.gene96754.t1 | AT5G27390 | 44.366 | 284 | 111 | 6 | 1 | 249 | 1 | 272 | 1.20e-70 | 218 |
| MS.gene96754.t1 | AT5G27390 | 45.055 | 182 | 85 | 4 | 1 | 178 | 1 | 171 | 2.05e-43 | 145 |
| MS.gene96754.t1 | AT5G27390 | 45.556 | 180 | 83 | 4 | 1 | 176 | 1 | 169 | 3.72e-43 | 145 |
Find 66 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATACTATTTCTATGAATT+TGG | 0.148599 | 1.1:+60980016 | MS.gene96754:CDS |
| AGTGCCGGAATGAATCTTTA+TGG | 0.239943 | 1.1:+60978628 | MS.gene96754:CDS |
| ATTCTATAGGTTATTATTGC+TGG | 0.294462 | 1.1:+60980461 | MS.gene96754:intron |
| GAGAATGAGGTTGCGGCGTT+TGG | 0.336028 | 1.1:-60977189 | None:intergenic |
| GGTATTGGCAATGCCAAGTT+TGG | 0.347275 | 1.1:-60977093 | None:intergenic |
| ACTTCTCTACTCTGCTGCTT+TGG | 0.355137 | 1.1:+60977215 | MS.gene96754:CDS |
| AGTTCCTGGTACCGTTTCTA+TGG | 0.357344 | 1.1:+60977314 | MS.gene96754:CDS |
| GCTTAAACTCACCTTCTTAG+AGG | 0.363505 | 1.1:+60978841 | MS.gene96754:CDS |
| GTGCCGGAATGAATCTTTAT+GGG | 0.368982 | 1.1:+60978629 | MS.gene96754:CDS |
| AATGCTAGAAAGAATGGATT+CGG | 0.369766 | 1.1:-60977282 | None:intergenic |
| AGCAGCAGAGTAGAGAAGTT+TGG | 0.373628 | 1.1:-60977211 | None:intergenic |
| GTTGCGGCGTTTGGAGGTGG+TGG | 0.376996 | 1.1:-60977180 | None:intergenic |
| GCTGCAAAATTATTTATTCC+AGG | 0.382623 | 1.1:+60979594 | MS.gene96754:CDS |
| TAGTAGGCTCAGGATATAAC+TGG | 0.385822 | 1.1:+60979552 | MS.gene96754:intron |
| CTGTTCTGAATGTTATTACT+CGG | 0.388036 | 1.1:+60978807 | MS.gene96754:CDS |
| GTAGAGAAGTTTGGAGAATG+AGG | 0.401843 | 1.1:-60977202 | None:intergenic |
| TTGCGGCGTTTGGAGGTGGT+GGG | 0.404161 | 1.1:-60977179 | None:intergenic |
| GAAGGATTTGGTGTTGGTAT+TGG | 0.429870 | 1.1:-60977108 | None:intergenic |
| TTATCCACATTTCCCAAACT+TGG | 0.431197 | 1.1:+60977080 | MS.gene96754:CDS |
| AATGAGGTTGCGGCGTTTGG+AGG | 0.435338 | 1.1:-60977186 | None:intergenic |
| TGGTACCGTTTCTATGGTGA+TGG | 0.435901 | 1.1:+60977320 | MS.gene96754:CDS |
| TGGTGGGGTTGTTGTTGTTG+AGG | 0.437784 | 1.1:-60977163 | None:intergenic |
| GATAAAGCAGGTGGGAGTTG+AGG | 0.448703 | 1.1:-60977254 | None:intergenic |
| GTATTGGCAATGCCAAGTTT+GGG | 0.449030 | 1.1:-60977092 | None:intergenic |
| GCATTGAAAATACCAGTTCC+TGG | 0.451415 | 1.1:+60977300 | MS.gene96754:CDS |
| AACTGGTTTAGCCTCTTTGA+AGG | 0.465573 | 1.1:+60979569 | MS.gene96754:CDS |
| GTCCCCATAAAGATTCATTC+CGG | 0.471869 | 1.1:-60978632 | None:intergenic |
| GAGGTTGCGGCGTTTGGAGG+TGG | 0.480230 | 1.1:-60977183 | None:intergenic |
| ATAGAAACGGTACCAGGAAC+TGG | 0.489371 | 1.1:-60977312 | None:intergenic |
| ATGCTAGAAAGAATGGATTC+GGG | 0.490973 | 1.1:-60977281 | None:intergenic |
| TGCGGCGTTTGGAGGTGGTG+GGG | 0.491273 | 1.1:-60977178 | None:intergenic |
| GGGAAATGTGGATAAAAGAA+TGG | 0.504323 | 1.1:-60977072 | None:intergenic |
| GAAGGTGAGTTTAAGCTGAC+TGG | 0.508321 | 1.1:-60978834 | None:intergenic |
| GTTGAGGCTGCTACAAATGA+TGG | 0.513227 | 1.1:-60977147 | None:intergenic |
| AAGTTTGGAGAATGAGGTTG+CGG | 0.522919 | 1.1:-60977196 | None:intergenic |
| GCACGGTTTGTATCTTCAGA+CGG | 0.529950 | 1.1:+60978679 | MS.gene96754:CDS |
| CTGTCTGATTACCTCTAAGA+AGG | 0.541391 | 1.1:-60978852 | None:intergenic |
| TGATCTGCACTTAGCAGTGA+TGG | 0.544292 | 1.1:+60980045 | MS.gene96754:CDS |
| ATCACCATAGAAACGGTACC+AGG | 0.545907 | 1.1:-60977318 | None:intergenic |
| ACCTGAGTTTCAAGATGTCA+TGG | 0.547354 | 1.1:+60977361 | MS.gene96754:CDS |
| CACGGTTTGTATCTTCAGAC+GGG | 0.552308 | 1.1:+60978680 | MS.gene96754:CDS |
| TGTTCTGAATGTTATTACTC+GGG | 0.553105 | 1.1:+60978808 | MS.gene96754:CDS |
| CTGCACTTAGCAGTGATGGC+AGG | 0.555281 | 1.1:+60980049 | MS.gene96754:CDS |
| CGAAACCATCACCATAGAAA+CGG | 0.556431 | 1.1:-60977325 | None:intergenic |
| TCCATGACATCTTGAAACTC+AGG | 0.557107 | 1.1:-60977362 | None:intergenic |
| GGCAGGCGTACGAGGTGGAA+AGG | 0.562307 | 1.1:+60980066 | MS.gene96754:CDS |
| TACACCATCAGTGTCCCACT+TGG | 0.562999 | 1.1:-60980501 | None:intergenic |
| GATGATGAAGGATTTGGTGT+TGG | 0.582126 | 1.1:-60977114 | None:intergenic |
| AACTGCACCACAGTCCAAGT+GGG | 0.608052 | 1.1:+60980487 | MS.gene96754:CDS |
| CAGTCCAAGTGGGACACTGA+TGG | 0.617273 | 1.1:+60980497 | MS.gene96754:CDS |
| GCAGTGATGGCAGGCGTACG+AGG | 0.618959 | 1.1:+60980058 | MS.gene96754:CDS |
| ATGACATCTTGAAACTCAGG+TGG | 0.623514 | 1.1:-60977359 | None:intergenic |
| TCGGGTGAAGATAAAGCAGG+TGG | 0.625600 | 1.1:-60977263 | None:intergenic |
| TCAGTGTCCCACTTGGACTG+TGG | 0.629774 | 1.1:-60980494 | None:intergenic |
| TGCCGGAATGAATCTTTATG+GGG | 0.630101 | 1.1:+60978630 | MS.gene96754:CDS |
| CAACTGCACCACAGTCCAAG+TGG | 0.630720 | 1.1:+60980486 | MS.gene96754:CDS |
| GATTCGGGTGAAGATAAAGC+AGG | 0.632755 | 1.1:-60977266 | None:intergenic |
| AATGCCAAGTTTGGGAAATG+TGG | 0.632899 | 1.1:-60977084 | None:intergenic |
| AAAATTAAGGAAGCAGCAGG+TGG | 0.633111 | 1.1:+60979821 | MS.gene96754:CDS |
| AAGAGAAGGAAGTTGTCGCA+CGG | 0.636464 | 1.1:+60978662 | MS.gene96754:CDS |
| TTGAGGCTGCTACAAATGAT+GGG | 0.647883 | 1.1:-60977146 | None:intergenic |
| GTGATGGCAGGCGTACGAGG+TGG | 0.650800 | 1.1:+60980061 | MS.gene96754:CDS |
| TCAAGATGTCATGGAACCTG+AGG | 0.659148 | 1.1:+60977370 | MS.gene96754:CDS |
| TGACATCTTGAAACTCAGGT+GGG | 0.665257 | 1.1:-60977358 | None:intergenic |
| TGGGGACAGAGCAAAAGAGA+AGG | 0.666086 | 1.1:+60978648 | MS.gene96754:CDS |
| CGGGTGAAGATAAAGCAGGT+GGG | 0.691537 | 1.1:-60977262 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATACAAAATCTA+AGG | - | chr1.1:60979005-60979024 | None:intergenic | 10.0% |
| !! | ACAATACAATACAAAATCTA+AGG | - | chr1.1:60979045-60979064 | None:intergenic | 20.0% |
| !! | ATATATGTTAGTGCATAATA+AGG | - | chr1.1:60978740-60978759 | None:intergenic | 20.0% |
| !! | ATTAGAAAACCTTCTTTATA+TGG | - | chr1.1:60979990-60980009 | None:intergenic | 20.0% |
| !! | TAAATAAGAAAGAAACCAAA+TGG | - | chr1.1:60979095-60979114 | None:intergenic | 20.0% |
| !! | TGCAAGATCAATAAAAATTA+AGG | + | chr1.1:60979808-60979827 | MS.gene96754:CDS | 20.0% |
| !! | TTACAAGATTGAAATTCAAA+AGG | + | chr1.1:60978180-60978199 | MS.gene96754:intron | 20.0% |
| !! | TTTAATATTGAGTTATCATC+TGG | + | chr1.1:60979111-60979130 | MS.gene96754:intron | 20.0% |
| !!! | ACATACTATTTCTATGAATT+TGG | + | chr1.1:60980016-60980035 | MS.gene96754:CDS | 20.0% |
| !!! | CGACATGATAATTTATTTTT+CGG | - | chr1.1:60980437-60980456 | None:intergenic | 20.0% |
| !!! | TTGTTCTAAGTTTATCTTTA+TGG | + | chr1.1:60979648-60979667 | MS.gene96754:intron | 20.0% |
| ! | AAACACTTCTAATACTGTAT+TGG | + | chr1.1:60978231-60978250 | MS.gene96754:intron | 25.0% |
| ! | AAATAAGTGTTTATCCAAAG+AGG | + | chr1.1:60977543-60977562 | MS.gene96754:intron | 25.0% |
| ! | AACACTTATTTGCAACTTAT+AGG | - | chr1.1:60977534-60977553 | None:intergenic | 25.0% |
| ! | AATAAGTGTTTATCCAAAGA+GGG | + | chr1.1:60977544-60977563 | MS.gene96754:intron | 25.0% |
| ! | AATACAATCCAATGAGAATT+TGG | - | chr1.1:60978294-60978313 | None:intergenic | 25.0% |
| ! | ACTAAAATCCTACAAAGTAA+CGG | - | chr1.1:60978611-60978630 | None:intergenic | 25.0% |
| ! | AGTTCTTGAAAGCAAATAAA+AGG | - | chr1.1:60979159-60979178 | None:intergenic | 25.0% |
| ! | ATCATAGCTAAGAACAAATT+TGG | - | chr1.1:60978021-60978040 | None:intergenic | 25.0% |
| ! | ATTCTATAGGTTATTATTGC+TGG | + | chr1.1:60980461-60980480 | MS.gene96754:intron | 25.0% |
| ! | CTTGAAAATACAGAAATGAT+TGG | - | chr1.1:60980403-60980422 | None:intergenic | 25.0% |
| ! | GGTTGAAAATTTATGCATAA+TGG | - | chr1.1:60978921-60978940 | None:intergenic | 25.0% |
| ! | TACATATTCTTCATTGTAGT+AGG | + | chr1.1:60979536-60979555 | MS.gene96754:intron | 25.0% |
| ! | TATTTGCATGAGAATGATTT+AGG | - | chr1.1:60977570-60977589 | None:intergenic | 25.0% |
| ! | TGAAAATTTATGCATAATGG+AGG | - | chr1.1:60978918-60978937 | None:intergenic | 25.0% |
| ! | TGTTGAATGATCTATAAAAG+AGG | - | chr1.1:60977849-60977868 | None:intergenic | 25.0% |
| ! | TTCATGTAAGTTATAACTTG+TGG | - | chr1.1:60977475-60977494 | None:intergenic | 25.0% |
| !! | AAAGAAGGTTTTCTAATTTC+AGG | + | chr1.1:60979993-60980012 | MS.gene96754:intron | 25.0% |
| !! | ATTTTCAATGCTAGAAAGAA+TGG | - | chr1.1:60977291-60977310 | None:intergenic | 25.0% |
| !! | CATTCTCATGCAAATAATTT+TGG | + | chr1.1:60977574-60977593 | MS.gene96754:intron | 25.0% |
| !! | CTTTTAATCACAATTTCCTA+GGG | + | chr1.1:60977414-60977433 | MS.gene96754:intron | 25.0% |
| !! | GAAAATTTATGCATAATGGA+GGG | - | chr1.1:60978917-60978936 | None:intergenic | 25.0% |
| !! | TATGCATAAATTTTCAACCA+TGG | + | chr1.1:60978922-60978941 | MS.gene96754:intron | 25.0% |
| !! | TCTTTTAATCACAATTTCCT+AGG | + | chr1.1:60977413-60977432 | MS.gene96754:intron | 25.0% |
| !!! | ACAAAGTTTTTTCTTGAGTT+GGG | + | chr1.1:60977794-60977813 | MS.gene96754:intron | 25.0% |
| !!! | ATCATGTCGTTTTATTCTAT+AGG | + | chr1.1:60980448-60980467 | MS.gene96754:intron | 25.0% |
| !!! | TACAAAGTTTTTTCTTGAGT+TGG | + | chr1.1:60977793-60977812 | MS.gene96754:intron | 25.0% |
| !!! | TGTTAGTTTTCTGTTAATTG+AGG | - | chr1.1:60978394-60978413 | None:intergenic | 25.0% |
| !!! | TTTTTCTTGTTATAAGCTCA+AGG | + | chr1.1:60979509-60979528 | MS.gene96754:intron | 25.0% |
| AAACCAAGAATTAGAAGGAA+AGG | - | chr1.1:60979736-60979755 | None:intergenic | 30.0% | |
| AAATGGCAAACAATGAACAA+AGG | - | chr1.1:60979078-60979097 | None:intergenic | 30.0% | |
| AACCAAGAATTAGAAGGAAA+GGG | - | chr1.1:60979735-60979754 | None:intergenic | 30.0% | |
| AATGTGAGACTTTGCTTTAT+TGG | - | chr1.1:60980191-60980210 | None:intergenic | 30.0% | |
| ACAAGTTATCCAAGAAAAGA+AGG | + | chr1.1:60979939-60979958 | MS.gene96754:intron | 30.0% | |
| AGGAAAAACCAAATTCTCAT+TGG | + | chr1.1:60978283-60978302 | MS.gene96754:intron | 30.0% | |
| AGGAAAAGTTTGCAATAAGA+AGG | - | chr1.1:60979139-60979158 | None:intergenic | 30.0% | |
| ATAAAAATTAAGGAAGCAGC+AGG | + | chr1.1:60979818-60979837 | MS.gene96754:CDS | 30.0% | |
| ATAATCGTTATGAGCAATGA+AGG | - | chr1.1:60978156-60978175 | None:intergenic | 30.0% | |
| ATAGATCATTCAACAAGTCT+CGG | + | chr1.1:60977854-60977873 | MS.gene96754:intron | 30.0% | |
| CACTAACATATATGTTCAGA+AGG | + | chr1.1:60978747-60978766 | MS.gene96754:intron | 30.0% | |
| CATTTACGTAACGAAATGAT+GGG | - | chr1.1:60979689-60979708 | None:intergenic | 30.0% | |
| GCTGCAAAATTATTTATTCC+AGG | + | chr1.1:60979594-60979613 | MS.gene96754:CDS | 30.0% | |
| TAACACATCCATATCAAACT+GGG | + | chr1.1:60980109-60980128 | MS.gene96754:intron | 30.0% | |
| TAATAAGGAAGTAGGAAGTT+AGG | - | chr1.1:60978725-60978744 | None:intergenic | 30.0% | |
| TAATCGTTATGAGCAATGAA+GGG | - | chr1.1:60978155-60978174 | None:intergenic | 30.0% | |
| TATTTGCAACTTATAGGACA+AGG | - | chr1.1:60977528-60977547 | None:intergenic | 30.0% | |
| TCATTGCTCATAACGATTAT+AGG | + | chr1.1:60978156-60978175 | MS.gene96754:intron | 30.0% | |
| TCATTTACGTAACGAAATGA+TGG | - | chr1.1:60979690-60979709 | None:intergenic | 30.0% | |
| TTAGTGCATAATAAGGAAGT+AGG | - | chr1.1:60978733-60978752 | None:intergenic | 30.0% | |
| TTATCCAAGAAAAGAAGGTT+TGG | + | chr1.1:60979944-60979963 | MS.gene96754:intron | 30.0% | |
| TTCCTTCTAATTCTTGGTTT+CGG | + | chr1.1:60979736-60979755 | MS.gene96754:intron | 30.0% | |
| TTTGTTCATTGTTTGCCATT+TGG | + | chr1.1:60979077-60979096 | MS.gene96754:intron | 30.0% | |
| ! | AATGCTAGAAAGAATGGATT+CGG | - | chr1.1:60977285-60977304 | None:intergenic | 30.0% |
| ! | ACTTTGCTTTATTGGTAACT+AGG | - | chr1.1:60980183-60980202 | None:intergenic | 30.0% |
| ! | AGTTTTCTGTTAATTGAGGT+TGG | - | chr1.1:60978390-60978409 | None:intergenic | 30.0% |
| ! | CTGTTCTGAATGTTATTACT+CGG | + | chr1.1:60978807-60978826 | MS.gene96754:CDS | 30.0% |
| ! | TGTTCTGAATGTTATTACTC+GGG | + | chr1.1:60978808-60978827 | MS.gene96754:CDS | 30.0% |
| ! | TTTATCTTCCGTTACTTTGT+AGG | + | chr1.1:60978600-60978619 | MS.gene96754:intron | 30.0% |
| !! | AGAAGCATCAATCAAACAAT+AGG | - | chr1.1:60977988-60978007 | None:intergenic | 30.0% |
| !! | ATTATGGTTGATTTTCACCA+TGG | + | chr1.1:60977763-60977782 | MS.gene96754:intron | 30.0% |
| !!! | CATGCAAATAATTTTGGTTG+TGG | + | chr1.1:60977580-60977599 | MS.gene96754:intron | 30.0% |
| !!! | TTTTGAGATGATGAAGGATT+TGG | - | chr1.1:60977123-60977142 | None:intergenic | 30.0% |
| AAACTTTGTAAACGCAACCA+TGG | - | chr1.1:60977783-60977802 | None:intergenic | 35.0% | |
| AAATACCAAACACTAAGCCA+TGG | - | chr1.1:60978942-60978961 | None:intergenic | 35.0% | |
| AATCGTTATGAGCAATGAAG+GGG | - | chr1.1:60978154-60978173 | None:intergenic | 35.0% | |
| ACAGCACATCCATATAAAGA+AGG | + | chr1.1:60979978-60979997 | MS.gene96754:intron | 35.0% | |
| ACCTATGCATTCACATTACA+TGG | - | chr1.1:60978978-60978997 | None:intergenic | 35.0% | |
| AGAATTGAATGTAGTACCTC+AGG | - | chr1.1:60977389-60977408 | None:intergenic | 35.0% | |
| AGTTCTTGAAGACATAAGCA+AGG | - | chr1.1:60979222-60979241 | None:intergenic | 35.0% | |
| ATCTATGTTAGAGTGACTTG+AGG | - | chr1.1:60979468-60979487 | None:intergenic | 35.0% | |
| ATGTCTTCAAGAACTTAGGT+TGG | + | chr1.1:60979227-60979246 | MS.gene96754:intron | 35.0% | |
| CAGCTAATCTGTTACAATCA+TGG | - | chr1.1:60978790-60978809 | None:intergenic | 35.0% | |
| CTAACACATCCATATCAAAC+TGG | + | chr1.1:60980108-60980127 | MS.gene96754:intron | 35.0% | |
| GAGAATTTACAAATTGCACC+TGG | - | chr1.1:60979615-60979634 | None:intergenic | 35.0% | |
| GAGGTTTAAATTGACAAAGC+AGG | - | chr1.1:60977830-60977849 | None:intergenic | 35.0% | |
| GCTTATGTCTTCAAGAACTT+AGG | + | chr1.1:60979223-60979242 | MS.gene96754:intron | 35.0% | |
| GGGAAATGTGGATAAAAGAA+TGG | - | chr1.1:60977075-60977094 | None:intergenic | 35.0% | |
| GTAATGTGAATGCATAGGTT+TGG | + | chr1.1:60978979-60978998 | MS.gene96754:intron | 35.0% | |
| GTCATAACTACGAGTAATGA+TGG | + | chr1.1:60978319-60978338 | MS.gene96754:intron | 35.0% | |
| TAGATCATTCAACAAGTCTC+GGG | + | chr1.1:60977855-60977874 | MS.gene96754:intron | 35.0% | |
| TCATCTCTAGCAGCTAATTA+TGG | + | chr1.1:60977747-60977766 | MS.gene96754:intron | 35.0% | |
| TCCACCATCAAAATTCACAT+CGG | - | chr1.1:60980319-60980338 | None:intergenic | 35.0% | |
| TCCATGTAATGTGAATGCAT+AGG | + | chr1.1:60978974-60978993 | MS.gene96754:intron | 35.0% | |
| TCGAATAAGTCAATCCAAAC+AGG | - | chr1.1:60977440-60977459 | None:intergenic | 35.0% | |
| TCTTCTTGTATCCCTTTAAC+AGG | - | chr1.1:60978118-60978137 | None:intergenic | 35.0% | |
| TGATCTGTCTAATGAACTGT+TGG | + | chr1.1:60978506-60978525 | MS.gene96754:intron | 35.0% | |
| TGCTTTCAAGAACTTAGACT+GGG | + | chr1.1:60979165-60979184 | MS.gene96754:intron | 35.0% | |
| TGTCTTCAAGAACTTAGGTT+GGG | + | chr1.1:60979228-60979247 | MS.gene96754:intron | 35.0% | |
| TTATCCACATTTCCCAAACT+TGG | + | chr1.1:60977080-60977099 | MS.gene96754:CDS | 35.0% | |
| TTCCCTTTCCTTCTAATTCT+TGG | + | chr1.1:60979730-60979749 | MS.gene96754:intron | 35.0% | |
| TTGACTTATTCGAGCTTATC+TGG | + | chr1.1:60977447-60977466 | MS.gene96754:intron | 35.0% | |
| TTGCTTTCAAGAACTTAGAC+TGG | + | chr1.1:60979164-60979183 | MS.gene96754:intron | 35.0% | |
| TTTGTCATCGCTAAAGACAA+TGG | - | chr1.1:60977671-60977690 | None:intergenic | 35.0% | |
| ! | ATGCTAGAAAGAATGGATTC+GGG | - | chr1.1:60977284-60977303 | None:intergenic | 35.0% |
| ! | TAGACCAAACCTTCTTTTCT+TGG | - | chr1.1:60979951-60979970 | None:intergenic | 35.0% |
| !! | ACTTTGTAGGATTTTAGTGC+CGG | + | chr1.1:60978613-60978632 | MS.gene96754:intron | 35.0% |
| AAAATTAAGGAAGCAGCAGG+TGG | + | chr1.1:60979821-60979840 | MS.gene96754:CDS | 40.0% | |
| AAGTTTGGAGAATGAGGTTG+CGG | - | chr1.1:60977199-60977218 | None:intergenic | 40.0% | |
| AATGCCAAGTTTGGGAAATG+TGG | - | chr1.1:60977087-60977106 | None:intergenic | 40.0% | |
| ACCTGAGTTTCAAGATGTCA+TGG | + | chr1.1:60977361-60977380 | MS.gene96754:CDS | 40.0% | |
| ACTGCATACCCAGTTTGATA+TGG | - | chr1.1:60980120-60980139 | None:intergenic | 40.0% | |
| AGAATGATTTAGGCCCTCTT+TGG | - | chr1.1:60977560-60977579 | None:intergenic | 40.0% | |
| ATGACATCTTGAAACTCAGG+TGG | - | chr1.1:60977362-60977381 | None:intergenic | 40.0% | |
| ATGTCTTCAAGAACTTAGGC+TGG | + | chr1.1:60979290-60979309 | MS.gene96754:intron | 40.0% | |
| ATTGAACTCCCATACACAGT+AGG | + | chr1.1:60977944-60977963 | MS.gene96754:intron | 40.0% | |
| ATTGGTATGAATCACCCGTT+TGG | - | chr1.1:60980385-60980404 | None:intergenic | 40.0% | |
| CACCGAAACCAAGAATTAGA+AGG | - | chr1.1:60979741-60979760 | None:intergenic | 40.0% | |
| CAGGTGACAATTACAGATCT+TGG | - | chr1.1:60978064-60978083 | None:intergenic | 40.0% | |
| CAGTACCAGGGTTATATCAT+AGG | + | chr1.1:60980136-60980155 | MS.gene96754:intron | 40.0% | |
| CCATCAAAATTCACATCGGA+CGG | - | chr1.1:60980315-60980334 | None:intergenic | 40.0% | |
| CGAAACCATCACCATAGAAA+CGG | - | chr1.1:60977328-60977347 | None:intergenic | 40.0% | |
| CGCAAATCAAGACATAAGCA+AGG | - | chr1.1:60979348-60979367 | None:intergenic | 40.0% | |
| CTAGGGTATGTTTGAATTGG+TGG | + | chr1.1:60977696-60977715 | MS.gene96754:intron | 40.0% | |
| CTAGGTCAACTAGCAAAAGT+TGG | - | chr1.1:60980165-60980184 | None:intergenic | 40.0% | |
| CTTGAGGCATAAAAACCCAA+TGG | - | chr1.1:60979452-60979471 | None:intergenic | 40.0% | |
| GCACTAGGGTATGTTTGAAT+TGG | + | chr1.1:60977693-60977712 | MS.gene96754:intron | 40.0% | |
| GCAGACTAATGACAAATCGA+GGG | + | chr1.1:60978257-60978276 | MS.gene96754:intron | 40.0% | |
| GCATTCACATTACATGGACT+TGG | - | chr1.1:60978972-60978991 | None:intergenic | 40.0% | |
| GCATTGAAAATACCAGTTCC+TGG | + | chr1.1:60977300-60977319 | MS.gene96754:CDS | 40.0% | |
| GCTTAAACTCACCTTCTTAG+AGG | + | chr1.1:60978841-60978860 | MS.gene96754:CDS | 40.0% | |
| GTAGAGAAGTTTGGAGAATG+AGG | - | chr1.1:60977205-60977224 | None:intergenic | 40.0% | |
| GTCCCCATAAAGATTCATTC+CGG | - | chr1.1:60978635-60978654 | None:intergenic | 40.0% | |
| GTGCCGGAATGAATCTTTAT+GGG | + | chr1.1:60978629-60978648 | MS.gene96754:CDS | 40.0% | |
| TAATGACAAATCGAGGGAGA+AGG | + | chr1.1:60978263-60978282 | MS.gene96754:intron | 40.0% | |
| TAGAGGTAATCAGACAGTCA+AGG | + | chr1.1:60978858-60978877 | MS.gene96754:intron | 40.0% | |
| TAGCTATGATTCCATGCACA+TGG | + | chr1.1:60978031-60978050 | MS.gene96754:intron | 40.0% | |
| TAGTAGGCTCAGGATATAAC+TGG | + | chr1.1:60979552-60979571 | MS.gene96754:intron | 40.0% | |
| TCCATGACATCTTGAAACTC+AGG | - | chr1.1:60977365-60977384 | None:intergenic | 40.0% | |
| TGACATCTTGAAACTCAGGT+GGG | - | chr1.1:60977361-60977380 | None:intergenic | 40.0% | |
| TGCAACTTATAGGACAAGGA+TGG | - | chr1.1:60977524-60977543 | None:intergenic | 40.0% | |
| TGCAGACTAATGACAAATCG+AGG | + | chr1.1:60978256-60978275 | MS.gene96754:intron | 40.0% | |
| TGCCGGAATGAATCTTTATG+GGG | + | chr1.1:60978630-60978649 | MS.gene96754:CDS | 40.0% | |
| TGTGTATGTATCAGTGCCAT+TGG | + | chr1.1:60979433-60979452 | MS.gene96754:intron | 40.0% | |
| TTCAACCATGGCTTAGTGTT+TGG | + | chr1.1:60978934-60978953 | MS.gene96754:intron | 40.0% | |
| TTCTTCATTGTAGTAGGCTC+AGG | + | chr1.1:60979542-60979561 | MS.gene96754:intron | 40.0% | |
| TTGAGGCTGCTACAAATGAT+GGG | - | chr1.1:60977149-60977168 | None:intergenic | 40.0% | |
| TTTGCCCAAAATGTACATGC+AGG | + | chr1.1:60979767-60979786 | MS.gene96754:intron | 40.0% | |
| ! | AACTGGTTTAGCCTCTTTGA+AGG | + | chr1.1:60979569-60979588 | MS.gene96754:CDS | 40.0% |
| ! | AGTGCCGGAATGAATCTTTA+TGG | + | chr1.1:60978628-60978647 | MS.gene96754:CDS | 40.0% |
| ! | CTGTCTGATTACCTCTAAGA+AGG | - | chr1.1:60978855-60978874 | None:intergenic | 40.0% |
| ! | GTATTGGCAATGCCAAGTTT+GGG | - | chr1.1:60977095-60977114 | None:intergenic | 40.0% |
| ! | GTGTATGTATCAGTGCCATT+GGG | + | chr1.1:60979434-60979453 | MS.gene96754:intron | 40.0% |
| ! | TTTTGCAGCATCCTTCAAAG+AGG | - | chr1.1:60979583-60979602 | None:intergenic | 40.0% |
| !! | ACGGATTCAGCGAGTTTTAA+TGG | - | chr1.1:60980296-60980315 | None:intergenic | 40.0% |
| !! | GAAGGATTTGGTGTTGGTAT+TGG | - | chr1.1:60977111-60977130 | None:intergenic | 40.0% |
| !! | GATGATGAAGGATTTGGTGT+TGG | - | chr1.1:60977117-60977136 | None:intergenic | 40.0% |
| !! | TCCGATGTGAATTTTGATGG+TGG | + | chr1.1:60980315-60980334 | MS.gene96754:intron | 40.0% |
| !! | TTCTTGAGTTGGGAAGTTTG+AGG | + | chr1.1:60977804-60977823 | MS.gene96754:intron | 40.0% |
| !!! | GGGTACTTTTGAGATGATGA+AGG | - | chr1.1:60977129-60977148 | None:intergenic | 40.0% |
| AAACTGGGTATGCAGTACCA+GGG | + | chr1.1:60980124-60980143 | MS.gene96754:intron | 45.0% | |
| AAGAGAAGGAAGTTGTCGCA+CGG | + | chr1.1:60978662-60978681 | MS.gene96754:CDS | 45.0% | |
| ACAAGCCAAGGCCTGTTAAA+GGG | + | chr1.1:60978104-60978123 | MS.gene96754:intron | 45.0% | |
| ACAATTTCCTAGGGCCTGTT+TGG | + | chr1.1:60977423-60977442 | MS.gene96754:intron | 45.0% | |
| AGCAGCAGAGTAGAGAAGTT+TGG | - | chr1.1:60977214-60977233 | None:intergenic | 45.0% | |
| AGCGATGACAAACTGCACTA+GGG | + | chr1.1:60977679-60977698 | MS.gene96754:intron | 45.0% | |
| AGTGAGTGTTTCACATGAGG+GGG | + | chr1.1:60980253-60980272 | MS.gene96754:intron | 45.0% | |
| AGTTCCTGGTACCGTTTCTA+TGG | + | chr1.1:60977314-60977333 | MS.gene96754:CDS | 45.0% | |
| ATAGAAACGGTACCAGGAAC+TGG | - | chr1.1:60977315-60977334 | None:intergenic | 45.0% | |
| ATCACCATAGAAACGGTACC+AGG | - | chr1.1:60977321-60977340 | None:intergenic | 45.0% | |
| ATGTGAAACACTCACTCGAG+GGG | - | chr1.1:60980249-60980268 | None:intergenic | 45.0% | |
| CACGGTTTGTATCTTCAGAC+GGG | + | chr1.1:60978680-60978699 | MS.gene96754:CDS | 45.0% | |
| CATGTGAAACACTCACTCGA+GGG | - | chr1.1:60980250-60980269 | None:intergenic | 45.0% | |
| CCCAAAATGTACATGCAGGA+GGG | + | chr1.1:60979771-60979790 | MS.gene96754:intron | 45.0% | |
| CGAGTGAGTGTTTCACATGA+GGG | + | chr1.1:60980251-60980270 | MS.gene96754:intron | 45.0% | |
| CTGTAATTGTCACCTGCCAA+GGG | + | chr1.1:60978068-60978087 | MS.gene96754:intron | 45.0% | |
| GAAGGTGAGTTTAAGCTGAC+TGG | - | chr1.1:60978837-60978856 | None:intergenic | 45.0% | |
| GACTCTGGCAGTGATTTCTT+TGG | + | chr1.1:60977886-60977905 | MS.gene96754:intron | 45.0% | |
| GAGTGAGTGTTTCACATGAG+GGG | + | chr1.1:60980252-60980271 | MS.gene96754:intron | 45.0% | |
| GATTCGGGTGAAGATAAAGC+AGG | - | chr1.1:60977269-60977288 | None:intergenic | 45.0% | |
| GCACGGTTTGTATCTTCAGA+CGG | + | chr1.1:60978679-60978698 | MS.gene96754:CDS | 45.0% | |
| GGTGACCTATGATATAACCC+TGG | - | chr1.1:60980144-60980163 | None:intergenic | 45.0% | |
| GTGTGGGGATTTCACATGAT+GGG | - | chr1.1:60980354-60980373 | None:intergenic | 45.0% | |
| GTTGAGGCTGCTACAAATGA+TGG | - | chr1.1:60977150-60977169 | None:intergenic | 45.0% | |
| TACAAGCCAAGGCCTGTTAA+AGG | + | chr1.1:60978103-60978122 | MS.gene96754:intron | 45.0% | |
| TAGCGATGACAAACTGCACT+AGG | + | chr1.1:60977678-60977697 | MS.gene96754:intron | 45.0% | |
| TCAAGATGTCATGGAACCTG+AGG | + | chr1.1:60977370-60977389 | MS.gene96754:CDS | 45.0% | |
| TCATGTGAAACACTCACTCG+AGG | - | chr1.1:60980251-60980270 | None:intergenic | 45.0% | |
| TCATGTGAAATCCCCACACA+AGG | + | chr1.1:60980355-60980374 | MS.gene96754:intron | 45.0% | |
| TCGAGTGAGTGTTTCACATG+AGG | + | chr1.1:60980250-60980269 | MS.gene96754:intron | 45.0% | |
| TCTCGGGTAATAGATGACTC+TGG | + | chr1.1:60977871-60977890 | MS.gene96754:intron | 45.0% | |
| TCTGTAATTGTCACCTGCCA+AGG | + | chr1.1:60978067-60978086 | MS.gene96754:intron | 45.0% | |
| TGAGACACAAGTACAAGCCA+AGG | + | chr1.1:60978092-60978111 | MS.gene96754:intron | 45.0% | |
| TGATCTGCACTTAGCAGTGA+TGG | + | chr1.1:60980045-60980064 | MS.gene96754:CDS | 45.0% | |
| TGGTACCGTTTCTATGGTGA+TGG | + | chr1.1:60977320-60977339 | MS.gene96754:CDS | 45.0% | |
| TGTATCCCTTTAACAGGCCT+TGG | - | chr1.1:60978112-60978131 | None:intergenic | 45.0% | |
| TGTGTGGGGATTTCACATGA+TGG | - | chr1.1:60980355-60980374 | None:intergenic | 45.0% | |
| ! | ACCCTCCTGCATGTACATTT+TGG | - | chr1.1:60979775-60979794 | None:intergenic | 45.0% |
| ! | ACTTCTCTACTCTGCTGCTT+TGG | + | chr1.1:60977215-60977234 | MS.gene96754:CDS | 45.0% |
| ! | CCCTCCTGCATGTACATTTT+GGG | - | chr1.1:60979774-60979793 | None:intergenic | 45.0% |
| ! | CCGTCCGATGTGAATTTTGA+TGG | + | chr1.1:60980312-60980331 | MS.gene96754:intron | 45.0% |
| !! | GGTATTGGCAATGCCAAGTT+TGG | - | chr1.1:60977096-60977115 | None:intergenic | 45.0% |
| !! | TCACATGATGGGTCAAGTAG+AGG | - | chr1.1:60980343-60980362 | None:intergenic | 45.0% |
| AACTCCCATACACAGTAGGC+TGG | + | chr1.1:60977948-60977967 | MS.gene96754:intron | 50.0% | |
| AACTGCACCACAGTCCAAGT+GGG | + | chr1.1:60980487-60980506 | MS.gene96754:CDS | 50.0% | |
| AATGCCCAGCCTACTGTGTA+TGG | - | chr1.1:60977956-60977975 | None:intergenic | 50.0% | |
| ACTCCCATACACAGTAGGCT+GGG | + | chr1.1:60977949-60977968 | MS.gene96754:intron | 50.0% | |
| AGTCAATCCAAACAGGCCCT+AGG | - | chr1.1:60977433-60977452 | None:intergenic | 50.0% | |
| ATGCCCAGCCTACTGTGTAT+GGG | - | chr1.1:60977955-60977974 | None:intergenic | 50.0% | |
| CAAACTGGGTATGCAGTACC+AGG | + | chr1.1:60980123-60980142 | MS.gene96754:intron | 50.0% | |
| CAGACACACGCACATGTTCT+TGG | - | chr1.1:60979415-60979434 | None:intergenic | 50.0% | |
| CCACACAAGGTGATCCAAAC+GGG | + | chr1.1:60980368-60980387 | MS.gene96754:intron | 50.0% | |
| CCCACACAAGGTGATCCAAA+CGG | + | chr1.1:60980367-60980386 | MS.gene96754:intron | 50.0% | |
| CCGTTTGGATCACCTTGTGT+GGG | - | chr1.1:60980370-60980389 | None:intergenic | 50.0% | |
| CGGGTGAAGATAAAGCAGGT+GGG | - | chr1.1:60977265-60977284 | None:intergenic | 50.0% | |
| CGTTTGGATCACCTTGTGTG+GGG | - | chr1.1:60980369-60980388 | None:intergenic | 50.0% | |
| GATAAAGCAGGTGGGAGTTG+AGG | - | chr1.1:60977257-60977276 | None:intergenic | 50.0% | |
| GCCCAAAATGTACATGCAGG+AGG | + | chr1.1:60979770-60979789 | MS.gene96754:intron | 50.0% | |
| TACACCATCAGTGTCCCACT+TGG | - | chr1.1:60980504-60980523 | None:intergenic | 50.0% | |
| TCGGGTGAAGATAAAGCAGG+TGG | - | chr1.1:60977266-60977285 | None:intergenic | 50.0% | |
| TGGGGACAGAGCAAAAGAGA+AGG | + | chr1.1:60978648-60978667 | MS.gene96754:CDS | 50.0% | |
| TGTACTTGTGTCTCAGCCCT+TGG | - | chr1.1:60978087-60978106 | None:intergenic | 50.0% | |
| TGTGAAACACTCACTCGAGG+GGG | - | chr1.1:60980248-60980267 | None:intergenic | 50.0% | |
| TTGGAAGAGAGCCATGTGCA+TGG | - | chr1.1:60978045-60978064 | None:intergenic | 50.0% | |
| ! | AGGAAGCAGCAGGTGGTTTT+AGG | + | chr1.1:60979828-60979847 | MS.gene96754:CDS | 50.0% |
| ! | TGGTGGGGTTGTTGTTGTTG+AGG | - | chr1.1:60977166-60977185 | None:intergenic | 50.0% |
| AATGAGGTTGCGGCGTTTGG+AGG | - | chr1.1:60977189-60977208 | None:intergenic | 55.0% | |
| CAACTGCACCACAGTCCAAG+TGG | + | chr1.1:60980486-60980505 | MS.gene96754:CDS | 55.0% | |
| CAGTCCAAGTGGGACACTGA+TGG | + | chr1.1:60980497-60980516 | MS.gene96754:CDS | 55.0% | |
| CCCGTTTGGATCACCTTGTG+TGG | - | chr1.1:60980371-60980390 | None:intergenic | 55.0% | |
| CTGCACTTAGCAGTGATGGC+AGG | + | chr1.1:60980049-60980068 | MS.gene96754:CDS | 55.0% | |
| GAGAATGAGGTTGCGGCGTT+TGG | - | chr1.1:60977192-60977211 | None:intergenic | 55.0% | |
| GTGAAACACTCACTCGAGGG+GGG | - | chr1.1:60980247-60980266 | None:intergenic | 55.0% | |
| TCAGTGTCCCACTTGGACTG+TGG | - | chr1.1:60980497-60980516 | None:intergenic | 55.0% | |
| TTTCACATGAGGGGGTCAGC+TGG | + | chr1.1:60980261-60980280 | MS.gene96754:intron | 55.0% | |
| AAACACTCACTCGAGGGGGG+AGG | - | chr1.1:60980244-60980263 | None:intergenic | 60.0% | |
| AACACTCACTCGAGGGGGGA+GGG | - | chr1.1:60980243-60980262 | None:intergenic | 60.0% | |
| CTTGTGTCTCAGCCCTTGGC+AGG | - | chr1.1:60978083-60978102 | None:intergenic | 60.0% | |
| TTGCGGCGTTTGGAGGTGGT+GGG | - | chr1.1:60977182-60977201 | None:intergenic | 60.0% | |
| ACACTCACTCGAGGGGGGAG+GGG | - | chr1.1:60980242-60980261 | None:intergenic | 65.0% | |
| AGGGGGTCAGCTGGAGGATC+TGG | + | chr1.1:60980270-60980289 | MS.gene96754:intron | 65.0% | |
| CACATGAGGGGGTCAGCTGG+AGG | + | chr1.1:60980264-60980283 | MS.gene96754:intron | 65.0% | |
| GAGGTTGCGGCGTTTGGAGG+TGG | - | chr1.1:60977186-60977205 | None:intergenic | 65.0% | |
| GCAGTGATGGCAGGCGTACG+AGG | + | chr1.1:60980058-60980077 | MS.gene96754:CDS | 65.0% | |
| GGCAGGCGTACGAGGTGGAA+AGG | + | chr1.1:60980066-60980085 | MS.gene96754:CDS | 65.0% | |
| GTGATGGCAGGCGTACGAGG+TGG | + | chr1.1:60980061-60980080 | MS.gene96754:CDS | 65.0% | |
| GTTGCGGCGTTTGGAGGTGG+TGG | - | chr1.1:60977183-60977202 | None:intergenic | 65.0% | |
| TGCGGCGTTTGGAGGTGGTG+GGG | - | chr1.1:60977181-60977200 | None:intergenic | 65.0% | |
| ACTCACTCGAGGGGGGAGGG+GGG | - | chr1.1:60980240-60980259 | None:intergenic | 70.0% | |
| CACTCACTCGAGGGGGGAGG+GGG | - | chr1.1:60980241-60980260 | None:intergenic | 70.0% | |
| CTCACTCGAGGGGGGAGGGG+GGG | - | chr1.1:60980239-60980258 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 60977068 | 60980562 | 60977068 | ID=MS.gene96754 |
| chr1.1 | mRNA | 60977068 | 60980562 | 60977068 | ID=MS.gene96754.t1;Parent=MS.gene96754 |
| chr1.1 | exon | 60977068 | 60977391 | 60977068 | ID=MS.gene96754.t1.exon1;Parent=MS.gene96754.t1 |
| chr1.1 | CDS | 60977068 | 60977391 | 60977068 | ID=cds.MS.gene96754.t1;Parent=MS.gene96754.t1 |
| chr1.1 | exon | 60978622 | 60978701 | 60978622 | ID=MS.gene96754.t1.exon2;Parent=MS.gene96754.t1 |
| chr1.1 | CDS | 60978622 | 60978701 | 60978622 | ID=cds.MS.gene96754.t1;Parent=MS.gene96754.t1 |
| chr1.1 | exon | 60978802 | 60978862 | 60978802 | ID=MS.gene96754.t1.exon3;Parent=MS.gene96754.t1 |
| chr1.1 | CDS | 60978802 | 60978862 | 60978802 | ID=cds.MS.gene96754.t1;Parent=MS.gene96754.t1 |
| chr1.1 | exon | 60979558 | 60979615 | 60979558 | ID=MS.gene96754.t1.exon4;Parent=MS.gene96754.t1 |
| chr1.1 | CDS | 60979558 | 60979615 | 60979558 | ID=cds.MS.gene96754.t1;Parent=MS.gene96754.t1 |
| chr1.1 | exon | 60979789 | 60979849 | 60979789 | ID=MS.gene96754.t1.exon5;Parent=MS.gene96754.t1 |
| chr1.1 | CDS | 60979789 | 60979849 | 60979789 | ID=cds.MS.gene96754.t1;Parent=MS.gene96754.t1 |
| chr1.1 | exon | 60980015 | 60980087 | 60980015 | ID=MS.gene96754.t1.exon6;Parent=MS.gene96754.t1 |
| chr1.1 | CDS | 60980015 | 60980087 | 60980015 | ID=cds.MS.gene96754.t1;Parent=MS.gene96754.t1 |
| chr1.1 | exon | 60980470 | 60980562 | 60980470 | ID=MS.gene96754.t1.exon7;Parent=MS.gene96754.t1 |
| chr1.1 | CDS | 60980470 | 60980562 | 60980470 | ID=cds.MS.gene96754.t1;Parent=MS.gene96754.t1 |
| Gene Sequence |
| Protein sequence |
