Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97224.t1 | XP_003621433.2 | 98.9 | 962 | 11 | 0 | 1 | 962 | 1 | 962 | 0.00E+00 | 1739.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97224.t1 | Q94A41 | 60.0 | 408 | 155 | 6 | 554 | 959 | 483 | 884 | 2.8e-153 | 544.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97224.t1 | G7L5A1 | 98.9 | 962 | 11 | 0 | 1 | 962 | 1 | 962 | 0.0e+00 | 1739.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene97224 | 0.87542 | 3.13E-68 | -1.69E-46 |
MS.gene049151 | MS.gene97224 | 0.842266 | 2.87E-58 | -1.69E-46 |
MS.gene049153 | MS.gene97224 | 0.858539 | 7.68E-63 | -1.69E-46 |
MS.gene049233 | MS.gene97224 | 0.801535 | 8.60E-49 | -1.69E-46 |
MS.gene049260 | MS.gene97224 | 0.834614 | 2.71E-56 | -1.69E-46 |
MS.gene04933 | MS.gene97224 | 0.806535 | 7.85E-50 | -1.69E-46 |
MS.gene049351 | MS.gene97224 | 0.813735 | 2.20E-51 | -1.69E-46 |
MS.gene049356 | MS.gene97224 | 0.822721 | 2.04E-53 | -1.69E-46 |
MS.gene049758 | MS.gene97224 | 0.854267 | 1.38E-61 | -1.69E-46 |
MS.gene050128 | MS.gene97224 | 0.843037 | 1.79E-58 | -1.69E-46 |
MS.gene050226 | MS.gene97224 | 0.811236 | 7.75E-51 | -1.69E-46 |
MS.gene050301 | MS.gene97224 | 0.863059 | 3.26E-64 | -1.69E-46 |
MS.gene050516 | MS.gene97224 | 0.877712 | 5.04E-69 | -1.69E-46 |
MS.gene050762 | MS.gene97224 | 0.809405 | 1.92E-50 | -1.69E-46 |
MS.gene050763 | MS.gene97224 | 0.812249 | 4.66E-51 | -1.69E-46 |
MS.gene050787 | MS.gene97224 | 0.80171 | 7.92E-49 | -1.69E-46 |
MS.gene05119 | MS.gene97224 | -0.807345 | 5.29E-50 | -1.69E-46 |
MS.gene051255 | MS.gene97224 | 0.807325 | 5.34E-50 | -1.69E-46 |
MS.gene051360 | MS.gene97224 | 0.842107 | 3.16E-58 | -1.69E-46 |
MS.gene051663 | MS.gene97224 | 0.806518 | 7.91E-50 | -1.69E-46 |
MS.gene051860 | MS.gene97224 | 0.861155 | 1.25E-63 | -1.69E-46 |
MS.gene051983 | MS.gene97224 | 0.810195 | 1.30E-50 | -1.69E-46 |
MS.gene052011 | MS.gene97224 | -0.804807 | 1.81E-49 | -1.69E-46 |
MS.gene052178 | MS.gene97224 | 0.803448 | 3.47E-49 | -1.69E-46 |
MS.gene052188 | MS.gene97224 | 0.84762 | 1.03E-59 | -1.69E-46 |
MS.gene052207 | MS.gene97224 | 0.851587 | 8.05E-61 | -1.69E-46 |
MS.gene052253 | MS.gene97224 | 0.82352 | 1.32E-53 | -1.69E-46 |
MS.gene052255 | MS.gene97224 | 0.800885 | 1.17E-48 | -1.69E-46 |
MS.gene052340 | MS.gene97224 | 0.809555 | 1.79E-50 | -1.69E-46 |
MS.gene052485 | MS.gene97224 | 0.817811 | 2.72E-52 | -1.69E-46 |
MS.gene05316 | MS.gene97224 | 0.837498 | 5.02E-57 | -1.69E-46 |
MS.gene053209 | MS.gene97224 | 0.811539 | 6.66E-51 | -1.69E-46 |
MS.gene053554 | MS.gene97224 | 0.833116 | 6.41E-56 | -1.69E-46 |
MS.gene053555 | MS.gene97224 | 0.86344 | 2.49E-64 | -1.69E-46 |
MS.gene053577 | MS.gene97224 | 0.817006 | 4.12E-52 | -1.69E-46 |
MS.gene053836 | MS.gene97224 | 0.860939 | 1.46E-63 | -1.69E-46 |
MS.gene053928 | MS.gene97224 | 0.821603 | 3.70E-53 | -1.69E-46 |
MS.gene054010 | MS.gene97224 | 0.84534 | 4.32E-59 | -1.69E-46 |
MS.gene054011 | MS.gene97224 | 0.85328 | 2.65E-61 | -1.69E-46 |
MS.gene054012 | MS.gene97224 | 0.852613 | 4.12E-61 | -1.69E-46 |
MS.gene054013 | MS.gene97224 | 0.847919 | 8.53E-60 | -1.69E-46 |
MS.gene054123 | MS.gene97224 | 0.800894 | 1.16E-48 | -1.69E-46 |
MS.gene054183 | MS.gene97224 | 0.834883 | 2.32E-56 | -1.69E-46 |
MS.gene054379 | MS.gene97224 | 0.816901 | 4.35E-52 | -1.69E-46 |
MS.gene054473 | MS.gene97224 | 0.832152 | 1.11E-55 | -1.69E-46 |
MS.gene054556 | MS.gene97224 | 0.833554 | 4.99E-56 | -1.69E-46 |
MS.gene054930 | MS.gene97224 | 0.824014 | 1.02E-53 | -1.69E-46 |
MS.gene055277 | MS.gene97224 | 0.83105 | 2.08E-55 | -1.69E-46 |
MS.gene055358 | MS.gene97224 | 0.800824 | 1.20E-48 | -1.69E-46 |
MS.gene055390 | MS.gene97224 | 0.844848 | 5.86E-59 | -1.69E-46 |
MS.gene055422 | MS.gene97224 | 0.832201 | 1.08E-55 | -1.69E-46 |
MS.gene055428 | MS.gene97224 | 0.801017 | 1.10E-48 | -1.69E-46 |
MS.gene055604 | MS.gene97224 | 0.896822 | 2.55E-76 | -1.69E-46 |
MS.gene055666 | MS.gene97224 | 0.842909 | 1.94E-58 | -1.69E-46 |
MS.gene055859 | MS.gene97224 | 0.800041 | 1.74E-48 | -1.69E-46 |
MS.gene056407 | MS.gene97224 | 0.816189 | 6.29E-52 | -1.69E-46 |
MS.gene056659 | MS.gene97224 | 0.853055 | 3.08E-61 | -1.69E-46 |
MS.gene056723 | MS.gene97224 | 0.843925 | 1.04E-58 | -1.69E-46 |
MS.gene056902 | MS.gene97224 | 0.874962 | 4.48E-68 | -1.69E-46 |
MS.gene056931 | MS.gene97224 | 0.815424 | 9.31E-52 | -1.69E-46 |
MS.gene056933 | MS.gene97224 | 0.813225 | 2.85E-51 | -1.69E-46 |
MS.gene056979 | MS.gene97224 | 0.809952 | 1.47E-50 | -1.69E-46 |
MS.gene057121 | MS.gene97224 | 0.835473 | 1.64E-56 | -1.69E-46 |
MS.gene057448 | MS.gene97224 | 0.857266 | 1.83E-62 | -1.69E-46 |
MS.gene057449 | MS.gene97224 | 0.841897 | 3.60E-58 | -1.69E-46 |
MS.gene057450 | MS.gene97224 | 0.849859 | 2.47E-60 | -1.69E-46 |
MS.gene057469 | MS.gene97224 | 0.937085 | 6.14E-98 | -1.69E-46 |
MS.gene057823 | MS.gene97224 | 0.801918 | 7.18E-49 | -1.69E-46 |
MS.gene057929 | MS.gene97224 | 0.81995 | 8.87E-53 | -1.69E-46 |
MS.gene058002 | MS.gene97224 | 0.840389 | 8.96E-58 | -1.69E-46 |
MS.gene05811 | MS.gene97224 | 0.856453 | 3.18E-62 | -1.69E-46 |
MS.gene058142 | MS.gene97224 | 0.833121 | 6.40E-56 | -1.69E-46 |
MS.gene058365 | MS.gene97224 | 0.812053 | 5.14E-51 | -1.69E-46 |
MS.gene058660 | MS.gene97224 | 0.802103 | 6.58E-49 | -1.69E-46 |
MS.gene058710 | MS.gene97224 | 0.839118 | 1.92E-57 | -1.69E-46 |
MS.gene05886 | MS.gene97224 | 0.809128 | 2.21E-50 | -1.69E-46 |
MS.gene058948 | MS.gene97224 | 0.801515 | 8.68E-49 | -1.69E-46 |
MS.gene058949 | MS.gene97224 | 0.875466 | 3.01E-68 | -1.69E-46 |
MS.gene05907 | MS.gene97224 | 0.839 | 2.06E-57 | -1.69E-46 |
MS.gene059128 | MS.gene97224 | 0.803439 | 3.48E-49 | -1.69E-46 |
MS.gene059285 | MS.gene97224 | 0.805923 | 1.06E-49 | -1.69E-46 |
MS.gene059294 | MS.gene97224 | 0.808022 | 3.80E-50 | -1.69E-46 |
MS.gene059366 | MS.gene97224 | 0.80019 | 1.62E-48 | -1.69E-46 |
MS.gene059420 | MS.gene97224 | 0.849275 | 3.59E-60 | -1.69E-46 |
MS.gene059518 | MS.gene97224 | 0.807058 | 6.08E-50 | -1.69E-46 |
MS.gene059688 | MS.gene97224 | 0.813627 | 2.33E-51 | -1.69E-46 |
MS.gene059692 | MS.gene97224 | 0.808662 | 2.77E-50 | -1.69E-46 |
MS.gene059695 | MS.gene97224 | 0.805593 | 1.24E-49 | -1.69E-46 |
MS.gene05984 | MS.gene97224 | 0.854005 | 1.64E-61 | -1.69E-46 |
MS.gene059974 | MS.gene97224 | 0.804019 | 2.64E-49 | -1.69E-46 |
MS.gene060314 | MS.gene97224 | 0.80824 | 3.41E-50 | -1.69E-46 |
MS.gene06037 | MS.gene97224 | 0.815757 | 7.85E-52 | -1.69E-46 |
MS.gene060495 | MS.gene97224 | 0.808715 | 2.70E-50 | -1.69E-46 |
MS.gene060559 | MS.gene97224 | 0.817753 | 2.80E-52 | -1.69E-46 |
MS.gene060569 | MS.gene97224 | 0.800231 | 1.59E-48 | -1.69E-46 |
MS.gene060986 | MS.gene97224 | 0.800422 | 1.45E-48 | -1.69E-46 |
MS.gene061049 | MS.gene97224 | 0.823661 | 1.23E-53 | -1.69E-46 |
MS.gene061051 | MS.gene97224 | -0.806502 | 7.97E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97224.t1 | MTR_7g013300 | 98.857 | 962 | 11 | 0 | 1 | 962 | 1 | 962 | 0.0 | 1971 |
MS.gene97224.t1 | MTR_8g468990 | 61.000 | 400 | 149 | 5 | 562 | 959 | 365 | 759 | 1.93e-178 | 537 |
MS.gene97224.t1 | MTR_8g468990 | 61.000 | 400 | 149 | 5 | 562 | 959 | 514 | 908 | 3.65e-176 | 536 |
MS.gene97224.t1 | MTR_1g026170 | 51.889 | 397 | 179 | 4 | 566 | 959 | 43 | 430 | 2.69e-146 | 441 |
MS.gene97224.t1 | MTR_8g468990 | 68.621 | 290 | 89 | 2 | 562 | 849 | 514 | 803 | 8.35e-143 | 446 |
MS.gene97224.t1 | MTR_1g019440 | 47.631 | 401 | 195 | 7 | 569 | 959 | 25 | 420 | 2.85e-125 | 386 |
MS.gene97224.t1 | MTR_1g019480 | 38.861 | 404 | 205 | 11 | 569 | 959 | 25 | 399 | 1.78e-88 | 288 |
MS.gene97224.t1 | MTR_3g062030 | 44.898 | 147 | 56 | 4 | 692 | 836 | 101 | 224 | 4.58e-35 | 134 |
MS.gene97224.t1 | MTR_6g027900 | 33.945 | 109 | 57 | 2 | 742 | 836 | 15 | 122 | 1.76e-14 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97224.t1 | AT1G69830 | 60.391 | 409 | 152 | 7 | 554 | 959 | 483 | 884 | 4.53e-176 | 535 |
MS.gene97224.t1 | AT1G76130 | 51.508 | 398 | 179 | 5 | 566 | 959 | 24 | 411 | 2.28e-145 | 438 |
MS.gene97224.t1 | AT1G76130 | 51.508 | 398 | 179 | 5 | 566 | 959 | 24 | 411 | 2.28e-145 | 438 |
MS.gene97224.t1 | AT4G25000 | 44.386 | 383 | 200 | 6 | 558 | 930 | 16 | 395 | 5.49e-111 | 349 |
Find 211 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGACCATTTCTATGATTT+TGG | 0.117174 | 7.3:+84270960 | MS.gene97224:CDS |
TCCTGAGAATGATCAATATT+TGG | 0.192543 | 7.3:-84264542 | None:intergenic |
ATAGTTGTTGATCAAGATTT+AGG | 0.213013 | 7.3:+84258069 | MS.gene97224:CDS |
TGCTTCTGAAAGAGATTTCT+TGG | 0.223704 | 7.3:-84258133 | None:intergenic |
GAAGATATTCCACGGGTAAA+AGG | 0.247929 | 7.3:-84257093 | None:intergenic |
TAATTCTTTGTCGTGTAAAA+TGG | 0.255747 | 7.3:-84258247 | None:intergenic |
ATCGGCAACGGATTGTTAAT+TGG | 0.258421 | 7.3:+84267716 | MS.gene97224:CDS |
CCGCTTTGCACAATGAATAT+TGG | 0.266571 | 7.3:+84268264 | MS.gene97224:CDS |
TATTTGCCATTGGAGAATAT+TGG | 0.266619 | 7.3:+84265036 | MS.gene97224:CDS |
TCTCGTCCTGTTCCTGTTCC+TGG | 0.271359 | 7.3:-84259655 | None:intergenic |
ACAGAGGTAATTTCCGTAAA+TGG | 0.283975 | 7.3:-84258660 | None:intergenic |
GTTGCCTGATACAGCAGTTT+TGG | 0.290995 | 7.3:+84257032 | MS.gene97224:CDS |
GGAGGAGATGAAGTCATTAA+TGG | 0.293059 | 7.3:+84258887 | MS.gene97224:CDS |
CTCCTGTTGGTTTCCCTTGA+GGG | 0.296467 | 7.3:-84268298 | None:intergenic |
TCAGATCGAAAAGCAAATTA+AGG | 0.322168 | 7.3:+84258506 | MS.gene97224:CDS |
ATTTGCCATTGGAGAATATT+GGG | 0.329829 | 7.3:+84265037 | MS.gene97224:CDS |
TGATGGTACATCTCCATTTA+CGG | 0.333019 | 7.3:+84258647 | MS.gene97224:CDS |
TAGTTGTTGATCAAGATTTA+GGG | 0.340792 | 7.3:+84258070 | MS.gene97224:CDS |
AAGGATCAGATTACCAAGTT+TGG | 0.352065 | 7.3:+84271186 | MS.gene97224:CDS |
AAAATGTTCCAAACACCATT+TGG | 0.354047 | 7.3:-84263755 | None:intergenic |
TGAAGCTTGGGCAGTTTGAT+TGG | 0.358239 | 7.3:+84271111 | MS.gene97224:CDS |
CCTCCCAAAACTGCTGTATC+AGG | 0.361485 | 7.3:-84257036 | None:intergenic |
TATTCTAAACTTACAGTTCC+AGG | 0.363570 | 7.3:-84270758 | None:intergenic |
CGCAGTGATATAGGGTTTGA+TGG | 0.364719 | 7.3:+84264605 | MS.gene97224:CDS |
TCCAAACGGTTCTCCTTTGA+AGG | 0.370052 | 7.3:-84271137 | None:intergenic |
CAACTTTGTCAGTAAGAAAC+AGG | 0.375246 | 7.3:+84257115 | MS.gene97224:CDS |
GTGGATGGCAAGAAGGATTA+AGG | 0.375764 | 7.3:+84259271 | MS.gene97224:CDS |
TTCAGAGTCCAAATGGTGTT+TGG | 0.376922 | 7.3:+84263747 | MS.gene97224:intron |
GCTTCCAACAGAGGCTTCTC+AGG | 0.377331 | 7.3:+84264975 | MS.gene97224:intron |
AAATGCCTTCACCTGTTGTC+TGG | 0.377850 | 7.3:-84258787 | None:intergenic |
ACTGGCTTCGCAGTGATATA+GGG | 0.380864 | 7.3:+84264597 | MS.gene97224:CDS |
AACTGGCTTCGCAGTGATAT+AGG | 0.382851 | 7.3:+84264596 | MS.gene97224:CDS |
CCATCGATGTGCACATAAAC+AGG | 0.386537 | 7.3:+84262759 | MS.gene97224:CDS |
AGGGAAACCAACAGGAGTTA+TGG | 0.396037 | 7.3:+84268304 | MS.gene97224:CDS |
TGCTGTTGATCTTGCAGTGC+AGG | 0.406589 | 7.3:+84258377 | MS.gene97224:CDS |
ATTGAGGCGCGGAGACGGGC+TGG | 0.406766 | 7.3:+84271008 | MS.gene97224:CDS |
TGCTAGACTGAACATAGAAT+TGG | 0.411305 | 7.3:+84258758 | MS.gene97224:CDS |
CAAGTCAGTCTTAAAAGCCT+TGG | 0.412773 | 7.3:-84258952 | None:intergenic |
GGGAAACCAACAGGAGTTAT+GGG | 0.412978 | 7.3:+84268305 | MS.gene97224:CDS |
TCATCGCATACAATTGCTTC+AGG | 0.414920 | 7.3:-84263800 | None:intergenic |
TGAGAAGAAGCGGAAGGCCT+TGG | 0.424223 | 7.3:+84259460 | MS.gene97224:CDS |
ATCAGCTTATCTCGTGGAAA+TGG | 0.424430 | 7.3:-84270707 | None:intergenic |
GGATGCCAAAATCATAGAAA+TGG | 0.425839 | 7.3:-84270965 | None:intergenic |
GCAGAGCCAGGAACAGGAAC+AGG | 0.428838 | 7.3:+84259649 | MS.gene97224:intron |
GATTCAATATATGCTGTTAA+TGG | 0.428901 | 7.3:+84259167 | MS.gene97224:CDS |
TGCCTAAAGCCGATGAAGTA+TGG | 0.430309 | 7.3:+84259369 | MS.gene97224:CDS |
AACATCGAAGTTCAGATCCT+TGG | 0.434053 | 7.3:+84259343 | MS.gene97224:CDS |
ATATCAAGGAATGGTTGAAC+TGG | 0.435789 | 7.3:+84264579 | MS.gene97224:CDS |
AGCAGAGGCTGCTTTCCAGC+AGG | 0.435920 | 7.3:+84258410 | MS.gene97224:CDS |
GCCATGGAAACATTTATTGA+TGG | 0.440309 | 7.3:+84258630 | MS.gene97224:CDS |
ATTATTGTCTCAACCAAACT+TGG | 0.441202 | 7.3:-84271199 | None:intergenic |
TCCTTCAAAGGAGAACCGTT+TGG | 0.446239 | 7.3:+84271136 | MS.gene97224:CDS |
GACCATACTTCATCGGCTTT+AGG | 0.447034 | 7.3:-84259371 | None:intergenic |
ATTAAAGCATCCCCTTCCTT+CGG | 0.454373 | 7.3:-84259410 | None:intergenic |
CAGATGTTGATTCTCAAAAG+TGG | 0.454777 | 7.3:+84259210 | MS.gene97224:CDS |
GTGGAAACAAAGAGCTGAAA+TGG | 0.455867 | 7.3:+84259097 | MS.gene97224:CDS |
CTGGAGAAGGCAATGGTACC+AGG | 0.457027 | 7.3:+84260515 | MS.gene97224:CDS |
TTTCTAGAGAACCATGATAC+AGG | 0.460426 | 7.3:+84268353 | MS.gene97224:CDS |
CTCCTCCTCTTGCTGTAAAG+TGG | 0.463951 | 7.3:-84258871 | None:intergenic |
AAGGGCTTTAGCTGTGGCAG+AGG | 0.464699 | 7.3:+84258584 | MS.gene97224:CDS |
GACCCTCAAGGGAAACCAAC+AGG | 0.464803 | 7.3:+84268296 | MS.gene97224:CDS |
AGTCAAAACATGCTATAGAA+AGG | 0.464930 | 7.3:+84258565 | MS.gene97224:CDS |
TACAACTTGAATTCATCCTA+TGG | 0.465762 | 7.3:+84262171 | MS.gene97224:CDS |
ACCAAATATTGATCATTCTC+AGG | 0.466304 | 7.3:+84264541 | MS.gene97224:CDS |
CAAAGCTTTCTCCGCATCAA+TGG | 0.466353 | 7.3:-84258820 | None:intergenic |
ATTGGAGCACACCAGACAAC+AGG | 0.467132 | 7.3:+84258776 | MS.gene97224:CDS |
TACTTGTTTCAGAGTCCAAA+TGG | 0.471097 | 7.3:+84263740 | MS.gene97224:intron |
TTGAGGCGCGGAGACGGGCT+GGG | 0.477610 | 7.3:+84271009 | MS.gene97224:CDS |
ACTCCTGTTGGTTTCCCTTG+AGG | 0.479089 | 7.3:-84268299 | None:intergenic |
ACGCTCTGAGGCTAGAAAAC+AGG | 0.480136 | 7.3:+84258212 | MS.gene97224:CDS |
AAGATATTCCACGGGTAAAA+GGG | 0.481230 | 7.3:-84257092 | None:intergenic |
TATTCTCCAATGGCAAATAC+AGG | 0.481558 | 7.3:-84265032 | None:intergenic |
GTTGATTGAGGCGCGGAGAC+GGG | 0.481679 | 7.3:+84271004 | MS.gene97224:CDS |
GTCAAAACATGCTATAGAAA+GGG | 0.485550 | 7.3:+84258566 | MS.gene97224:CDS |
ATTCACTAGTAATGAAGCTT+GGG | 0.489421 | 7.3:+84271099 | MS.gene97224:CDS |
TTCCTCTGTAAATAGGCCTT+GGG | 0.491224 | 7.3:+84262721 | MS.gene97224:intron |
GCATATATCTTGACTCATCC+TGG | 0.492383 | 7.3:+84270740 | MS.gene97224:CDS |
TTAAATGCAGAGCCAGGAAC+AGG | 0.493917 | 7.3:+84259643 | MS.gene97224:intron |
TCCACGAGATAAGCTGATGC+AGG | 0.495956 | 7.3:+84270712 | MS.gene97224:CDS |
AGAACTTAAATATTGTATAG+AGG | 0.497408 | 7.3:+84262203 | MS.gene97224:CDS |
AACGCTATCCCTTTGTTCCA+AGG | 0.503508 | 7.3:+84257067 | MS.gene97224:CDS |
TATATAAACATACCACTTGA+AGG | 0.503542 | 7.3:-84263848 | None:intergenic |
TACGGAAATTACCTCTGTCC+AGG | 0.503546 | 7.3:+84258665 | MS.gene97224:CDS |
ATGAGCTGCATCAGCGGCTG+TGG | 0.505054 | 7.3:-84258484 | None:intergenic |
ATTGCATTCTCACGATCTGC+TGG | 0.506420 | 7.3:+84262227 | MS.gene97224:CDS |
TTAGCTGTGGCAGAGGAAGC+AGG | 0.506628 | 7.3:+84258591 | MS.gene97224:CDS |
ACAGAATCTGTTGCTGCTCA+AGG | 0.507447 | 7.3:+84260603 | MS.gene97224:CDS |
GATTCACTAGTAATGAAGCT+TGG | 0.508154 | 7.3:+84271098 | MS.gene97224:CDS |
TTTCGGTGGCAAGCTAGCAT+GGG | 0.509502 | 7.3:+84263775 | MS.gene97224:CDS |
GCTGCTGATTTATCTAAATG+TGG | 0.509564 | 7.3:+84260552 | MS.gene97224:CDS |
AAGTTCTTCCACAGAACCAT+AGG | 0.512643 | 7.3:-84262187 | None:intergenic |
TCAAATCCTGTATTTGCCAT+TGG | 0.514445 | 7.3:+84265026 | MS.gene97224:CDS |
AGCACTGCAGAGGTCATTGA+TGG | 0.516761 | 7.3:+84259052 | MS.gene97224:CDS |
TTCAACGGAAGACTATAAAG+TGG | 0.517097 | 7.3:+84259492 | MS.gene97224:CDS |
ACCATCAATAAATGTTTCCA+TGG | 0.517681 | 7.3:-84258631 | None:intergenic |
GAGAAACAATTGAGAAGAAG+CGG | 0.518091 | 7.3:+84259450 | MS.gene97224:CDS |
GTGATATAGGGTTTGATGGA+TGG | 0.521379 | 7.3:+84264609 | MS.gene97224:CDS |
GACGGGCTGGGATCCATTGT+CGG | 0.524523 | 7.3:+84271021 | MS.gene97224:CDS |
TGATTTAGAATCTCAGATGA+TGG | 0.526576 | 7.3:+84258719 | MS.gene97224:CDS |
AGTTGATTGAGGCGCGGAGA+CGG | 0.528023 | 7.3:+84271003 | MS.gene97224:CDS |
CCACGGGTAAAAGGGTGCCT+TGG | 0.533549 | 7.3:-84257084 | None:intergenic |
CAGCTTTAGATGCCAACTCC+TGG | 0.537762 | 7.3:-84260533 | None:intergenic |
TACCTCAGTGGATGGCAAGA+AGG | 0.538531 | 7.3:+84259264 | MS.gene97224:CDS |
TTCAAGTTGTAAAGATCAGA+AGG | 0.539002 | 7.3:-84262159 | None:intergenic |
GTATATGAGAAGTTGCCTGC+TGG | 0.539220 | 7.3:-84258425 | None:intergenic |
TCAAAGGAGAACCGTTTGGA+AGG | 0.539858 | 7.3:+84271140 | MS.gene97224:CDS |
GCAGCAACAGATTCTGTTGG+TGG | 0.540975 | 7.3:-84260597 | None:intergenic |
CTCGAGAAAAGCCGAAGGAA+GGG | 0.543534 | 7.3:+84259399 | MS.gene97224:CDS |
CCTGTTTATGTGCACATCGA+TGG | 0.543841 | 7.3:-84262759 | None:intergenic |
TCAATATATGCTGTTAATGG+TGG | 0.543917 | 7.3:+84259170 | MS.gene97224:CDS |
CCTTGGAGCGTGCTCTTCAA+CGG | 0.544131 | 7.3:+84259477 | MS.gene97224:CDS |
TCTGCCAGCTCCCTTCCAAA+CGG | 0.545037 | 7.3:-84271151 | None:intergenic |
ATTTGTCCGAAAAGATATCA+AGG | 0.545748 | 7.3:+84264565 | MS.gene97224:CDS |
CACCATCCCATAACTCCTGT+TGG | 0.545761 | 7.3:-84268311 | None:intergenic |
CAGAAGATGCTCTGAAGATG+TGG | 0.546807 | 7.3:+84259078 | MS.gene97224:CDS |
TCAACTCAGTTATTACATCA+TGG | 0.548542 | 7.3:-84270986 | None:intergenic |
AAAAGGGTGCCTTGGAACAA+AGG | 0.551206 | 7.3:-84257076 | None:intergenic |
GTTCTCGCTGCAATCTAAGC+TGG | 0.551922 | 7.3:+84258338 | MS.gene97224:CDS |
AAGGCAATGGTACCAGGAGT+TGG | 0.552913 | 7.3:+84260521 | MS.gene97224:CDS |
GAAGATTCTCTTGTCAGCAA+AGG | 0.555309 | 7.3:-84257656 | None:intergenic |
ATATACAATGCAAACAATGA+AGG | 0.556390 | 7.3:+84271056 | MS.gene97224:CDS |
ATTAGCTATAAGAGAGCTTG+AGG | 0.557373 | 7.3:+84258266 | MS.gene97224:CDS |
CCGTTGAAGAGCACGCTCCA+AGG | 0.558456 | 7.3:-84259477 | None:intergenic |
GGAAGCAGGTGAACATGCAA+AGG | 0.558586 | 7.3:+84258605 | MS.gene97224:CDS |
TCTTGATAGAGCTCCGACAA+TGG | 0.559559 | 7.3:-84271034 | None:intergenic |
AAATGGTCATAAAATATGAC+AGG | 0.559902 | 7.3:-84270948 | None:intergenic |
GTTTGATTGGAATCCTTCAA+AGG | 0.562684 | 7.3:+84271124 | MS.gene97224:CDS |
GGAGAATGATAGACCCTCAA+GGG | 0.562886 | 7.3:+84268285 | MS.gene97224:CDS |
CAAAGGAGAACCGTTTGGAA+GGG | 0.566471 | 7.3:+84271141 | MS.gene97224:CDS |
TTATATAAATAGATGCTCAT+CGG | 0.567922 | 7.3:+84267698 | MS.gene97224:intron |
TTTCCACGCCCCTGAAAATG+TGG | 0.569648 | 7.3:-84263824 | None:intergenic |
GCAAATTAAGGATGCAACTG+AGG | 0.569739 | 7.3:+84258518 | MS.gene97224:CDS |
CTGCTGATTTATCTAAATGT+GGG | 0.570189 | 7.3:+84260553 | MS.gene97224:CDS |
GCTCGAGAAAAGCCGAAGGA+AGG | 0.571860 | 7.3:+84259398 | MS.gene97224:CDS |
TGAACATGCAAAGGAAGCCA+TGG | 0.575336 | 7.3:+84258614 | MS.gene97224:CDS |
AAAGGGTGCCTTGGAACAAA+GGG | 0.576112 | 7.3:-84257075 | None:intergenic |
CAATATATGCTGTTAATGGT+GGG | 0.576491 | 7.3:+84259171 | MS.gene97224:CDS |
CTTGTGTGGACCCTGTATCA+TGG | 0.577262 | 7.3:-84268364 | None:intergenic |
CCCTGCATCAGCTTATCTCG+TGG | 0.582462 | 7.3:-84270713 | None:intergenic |
GACAGCTTGTCTTATGAACA+TGG | 0.583568 | 7.3:+84265059 | MS.gene97224:CDS |
AAATAGATGCTCATCGGCAA+CGG | 0.583800 | 7.3:+84267704 | MS.gene97224:intron |
AGAACCGTTTGGAAGGGAGC+TGG | 0.583813 | 7.3:+84271147 | MS.gene97224:CDS |
TCGAGAAAAGCCGAAGGAAG+GGG | 0.586841 | 7.3:+84259400 | MS.gene97224:CDS |
TCCGAAAAGATATCAAGGAA+TGG | 0.586911 | 7.3:+84264570 | MS.gene97224:CDS |
CAGACAAGAGGCTATAGAGA+AGG | 0.587002 | 7.3:+84258161 | MS.gene97224:CDS |
GTTAATTGGATCAATGCGAC+CGG | 0.588371 | 7.3:+84267730 | MS.gene97224:CDS |
AGCAATAGACCATACTTCAT+CGG | 0.588964 | 7.3:-84259378 | None:intergenic |
GATCAATATTTGGTGCAGCA+TGG | 0.589866 | 7.3:-84264532 | None:intergenic |
GGAAGTTTGTGCTACAACCA+AGG | 0.590205 | 7.3:+84265080 | MS.gene97224:CDS |
CAAGACGAAGGCAATTTCCA+AGG | 0.591323 | 7.3:+84258935 | MS.gene97224:CDS |
GCAGTGCTGCACATCTTCTG+AGG | 0.592114 | 7.3:-84259037 | None:intergenic |
AGGAACAGGACGAGAGATTG+TGG | 0.593398 | 7.3:+84259663 | MS.gene97224:CDS |
TTAACTGGGAGAGCTGGAGA+AGG | 0.594007 | 7.3:+84260502 | MS.gene97224:CDS |
GCAACAGATTCTGTTGGTGG+CGG | 0.595036 | 7.3:-84260594 | None:intergenic |
TAGAGATATACCTCAGTGGA+TGG | 0.596706 | 7.3:+84259256 | MS.gene97224:CDS |
TGAGCAGCAACAGATTCTGT+TGG | 0.599148 | 7.3:-84260600 | None:intergenic |
GAATTCATCCTATGGTTCTG+TGG | 0.602407 | 7.3:+84262179 | MS.gene97224:CDS |
GAAAACCACTTTACAGCAAG+AGG | 0.602853 | 7.3:+84258866 | MS.gene97224:CDS |
GCACACCAGACAACAGGTGA+AGG | 0.605135 | 7.3:+84258782 | MS.gene97224:CDS |
GAAGGATACGTAGCTCAAGT+TGG | 0.606714 | 7.3:+84271074 | MS.gene97224:CDS |
GGAGAAAATGAGAAAAGATG+TGG | 0.609233 | 7.3:+84258908 | MS.gene97224:CDS |
GTAGAAAATATCAAGTTACA+AGG | 0.611199 | 7.3:+84258687 | MS.gene97224:CDS |
TTCTTTGTCGTGTAAAATGG+CGG | 0.611518 | 7.3:-84258244 | None:intergenic |
TGGCAGAAGTTCGTTGACAA+AGG | 0.613157 | 7.3:+84271167 | MS.gene97224:CDS |
CAAAGTTGAAGATATTCCAC+GGG | 0.613807 | 7.3:-84257100 | None:intergenic |
TGCTGCACATCTTCTGAGGT+AGG | 0.615270 | 7.3:-84259033 | None:intergenic |
TCAACGGAAGACTATAAAGT+GGG | 0.615366 | 7.3:+84259493 | MS.gene97224:CDS |
ACAAAGTTGAAGATATTCCA+CGG | 0.616423 | 7.3:-84257101 | None:intergenic |
CCAATATTCATTGTGCAAAG+CGG | 0.617314 | 7.3:-84268264 | None:intergenic |
AAATGCAGATGAAGTACCAC+CGG | 0.620620 | 7.3:-84267749 | None:intergenic |
GAAGATGTGCAGCACTGCAG+AGG | 0.620983 | 7.3:+84259042 | MS.gene97224:CDS |
TTCGGTGGCAAGCTAGCATG+GGG | 0.623049 | 7.3:+84263776 | MS.gene97224:CDS |
TGTAATAACTGAGTTGATTG+AGG | 0.624388 | 7.3:+84270992 | MS.gene97224:CDS |
ATCGGCTTTAGGCAACTCCA+AGG | 0.625267 | 7.3:-84259360 | None:intergenic |
CAACAGGAGTTATGGGATGG+TGG | 0.626906 | 7.3:+84268312 | MS.gene97224:CDS |
CAAATTAAGGATGCAACTGA+GGG | 0.629263 | 7.3:+84258519 | MS.gene97224:CDS |
AGAAGCACAAGACAGACAAG+AGG | 0.629335 | 7.3:+84258149 | MS.gene97224:CDS |
GCTGTCCCAATATTCTCCAA+TGG | 0.630063 | 7.3:-84265042 | None:intergenic |
AACCAACAGGAGTTATGGGA+TGG | 0.630106 | 7.3:+84268309 | MS.gene97224:CDS |
GGGAGAGCTGGAGAAGGCAA+TGG | 0.630305 | 7.3:+84260508 | MS.gene97224:CDS |
CCACGAGATAAGCTGATGCA+GGG | 0.630564 | 7.3:+84270713 | MS.gene97224:CDS |
TGAAGAACTTGCACGCTCTG+AGG | 0.633303 | 7.3:+84258200 | MS.gene97224:CDS |
ATATAGGGTTTGATGGATGG+CGG | 0.635180 | 7.3:+84264612 | MS.gene97224:CDS |
TGCATTTGATATAACTACAA+AGG | 0.635406 | 7.3:+84267765 | MS.gene97224:CDS |
TGGAGAATGATAGACCCTCA+AGG | 0.637070 | 7.3:+84268284 | MS.gene97224:CDS |
GCAGGTTGAAAAGTTAGCAG+AGG | 0.637344 | 7.3:+84258395 | MS.gene97224:CDS |
AACAATTGAGAAGAAGCGGA+AGG | 0.639173 | 7.3:+84259454 | MS.gene97224:CDS |
TTGATCTTCAAGAGTCACAC+AGG | 0.642439 | 7.3:+84258844 | MS.gene97224:CDS |
AGAAATGTGACAGCACGAGA+AGG | 0.646938 | 7.3:-84268335 | None:intergenic |
GTTAAGTACAACATCTCCCA+AGG | 0.647520 | 7.3:-84262737 | None:intergenic |
TATAGAAAGGGCTTTAGCTG+TGG | 0.648328 | 7.3:+84258578 | MS.gene97224:CDS |
TTCTAGAGAACCATGATACA+GGG | 0.652982 | 7.3:+84268354 | MS.gene97224:CDS |
GGGCGTGGAAATCCTTCAAG+TGG | 0.653864 | 7.3:+84263836 | MS.gene97224:CDS |
TGAACAAAGAGCCATTGATG+CGG | 0.654920 | 7.3:+84258809 | MS.gene97224:CDS |
AAACAGGTTACATACTTGTG+TGG | 0.655241 | 7.3:-84268378 | None:intergenic |
TGCTGATTTATCTAAATGTG+GGG | 0.657062 | 7.3:+84260554 | MS.gene97224:CDS |
TATATGCTGTTAATGGTGGG+AGG | 0.658211 | 7.3:+84259174 | MS.gene97224:CDS |
GATGATGGTTGCGAGAAATG+AGG | 0.661522 | 7.3:+84258734 | MS.gene97224:CDS |
GGGTACAATATCGTCCATTG+TGG | 0.662713 | 7.3:+84258539 | MS.gene97224:CDS |
GATCTGATGAGCTGCATCAG+CGG | 0.666604 | 7.3:-84258490 | None:intergenic |
ATCCTTCTTGCCATCCACTG+AGG | 0.669220 | 7.3:-84259266 | None:intergenic |
AATTGGATCAATGCGACCGG+TGG | 0.671016 | 7.3:+84267733 | MS.gene97224:CDS |
AACCACTTTACAGCAAGAGG+AGG | 0.671212 | 7.3:+84258869 | MS.gene97224:CDS |
AAGTGGAAACTACTGAGTGA+CGG | 0.680368 | 7.3:+84259227 | MS.gene97224:CDS |
CACTGAGGTATATCTCTACG+AGG | 0.683904 | 7.3:-84259251 | None:intergenic |
TATCTCGTGGAAATGGCCAG+TGG | 0.698058 | 7.3:-84270700 | None:intergenic |
AATGTGGGGTGACTGCAGTG+TGG | 0.703208 | 7.3:+84260568 | MS.gene97224:CDS |
TAACTGAGTTGATTGAGGCG+CGG | 0.704575 | 7.3:+84270997 | MS.gene97224:CDS |
CTCGTAGAGATATACCTCAG+TGG | 0.710792 | 7.3:+84259252 | MS.gene97224:CDS |
TATTGCTCGAGAAAAGCCGA+AGG | 0.712107 | 7.3:+84259394 | MS.gene97224:CDS |
AGATGTGGCAGACAAGACGA+AGG | 0.726771 | 7.3:+84258923 | MS.gene97224:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 84257018 | 84271220 | 84257018 | ID=MS.gene97224 |
chr7.3 | mRNA | 84257018 | 84271220 | 84257018 | ID=MS.gene97224.t1;Parent=MS.gene97224 |
chr7.3 | exon | 84257018 | 84257136 | 84257018 | ID=MS.gene97224.t1.exon1;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84257018 | 84257136 | 84257018 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84257648 | 84257708 | 84257648 | ID=MS.gene97224.t1.exon2;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84257648 | 84257708 | 84257648 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84258045 | 84259542 | 84258045 | ID=MS.gene97224.t1.exon3;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84258045 | 84259542 | 84258045 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84259653 | 84259684 | 84259653 | ID=MS.gene97224.t1.exon4;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84259653 | 84259684 | 84259653 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84260492 | 84260624 | 84260492 | ID=MS.gene97224.t1.exon5;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84260492 | 84260624 | 84260492 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84262151 | 84262248 | 84262151 | ID=MS.gene97224.t1.exon6;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84262151 | 84262248 | 84262151 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84262736 | 84262780 | 84262736 | ID=MS.gene97224.t1.exon7;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84262736 | 84262780 | 84262736 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84263752 | 84263857 | 84263752 | ID=MS.gene97224.t1.exon8;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84263752 | 84263857 | 84263752 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84264522 | 84264648 | 84264522 | ID=MS.gene97224.t1.exon9;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84264522 | 84264648 | 84264522 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84264986 | 84265101 | 84264986 | ID=MS.gene97224.t1.exon10;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84264986 | 84265101 | 84264986 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84267710 | 84267786 | 84267710 | ID=MS.gene97224.t1.exon11;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84267710 | 84267786 | 84267710 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84268251 | 84268385 | 84268251 | ID=MS.gene97224.t1.exon12;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84268251 | 84268385 | 84268251 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84270698 | 84270766 | 84270698 | ID=MS.gene97224.t1.exon13;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84270698 | 84270766 | 84270698 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
chr7.3 | exon | 84270948 | 84271220 | 84270948 | ID=MS.gene97224.t1.exon14;Parent=MS.gene97224.t1 |
chr7.3 | CDS | 84270948 | 84271220 | 84270948 | ID=cds.MS.gene97224.t1;Parent=MS.gene97224.t1 |
Gene Sequence |
Protein sequence |