Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003860.01.T01 | XP_013468528.1 | 70 | 130 | 34 | 3 | 1 | 127 | 1 | 128 | 1.84E-42 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003860.01.T01 | B7FH85 | 70.000 | 130 | 34 | 3 | 1 | 127 | 1 | 128 | 8.80e-43 | 147 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0180003860.01 | 0.839087 | 1.954447e-57 | 2.670030e-54 |
| MsG0080048058.01 | MsG0180003860.01 | 0.826383 | 2.796482e-54 | 2.618558e-51 |
| MsG0080048383.01 | MsG0180003860.01 | 0.819861 | 9.297706e-53 | 7.239973e-50 |
| MsG0080048687.01 | MsG0180003860.01 | 0.850948 | 1.220139e-60 | 2.430544e-57 |
| MsG0080048843.01 | MsG0180003860.01 | 0.809973 | 1.451858e-50 | 8.645766e-48 |
| MsG0180000001.01 | MsG0180003860.01 | 0.840436 | 8.706281e-58 | 1.240034e-54 |
| MsG0180000023.01 | MsG0180003860.01 | 0.806556 | 7.767931e-50 | 4.228996e-47 |
| MsG0180000364.01 | MsG0180003860.01 | 0.820463 | 6.768485e-53 | 5.359485e-50 |
| MsG0180000799.01 | MsG0180003860.01 | 0.853312 | 2.596472e-61 | 5.586404e-58 |
| MsG0180000882.01 | MsG0180003860.01 | 0.830297 | 3.179273e-55 | 3.335829e-52 |
| MsG0180001117.01 | MsG0180003860.01 | 0.806938 | 6.450908e-50 | 3.546608e-47 |
| MsG0180001173.01 | MsG0180003860.01 | 0.814406 | 1.565587e-51 | 1.049651e-48 |
| MsG0180001237.01 | MsG0180003860.01 | 0.848033 | 7.932186e-60 | 1.436568e-56 |
| MsG0180001294.01 | MsG0180003860.01 | 0.861586 | 9.247659e-64 | 2.629905e-60 |
| MsG0180001566.01 | MsG0180003860.01 | 0.817422 | 3.325810e-52 | 2.421042e-49 |
| MsG0180001599.01 | MsG0180003860.01 | 0.817380 | 3.398254e-52 | 2.470923e-49 |
| MsG0180002283.01 | MsG0180003860.01 | 0.841274 | 5.246932e-58 | 7.669750e-55 |
| MsG0180003190.01 | MsG0180003860.01 | 0.811890 | 5.582520e-51 | 3.497039e-48 |
| MsG0180003303.01 | MsG0180003860.01 | 0.839713 | 1.344280e-57 | 1.872034e-54 |
| MsG0180003627.01 | MsG0180003860.01 | 0.811128 | 8.173513e-51 | 5.018238e-48 |
| MsG0180003744.01 | MsG0180003860.01 | 0.835283 | 1.836134e-56 | 2.235112e-53 |
| MsG0180003860.01 | MsG0180003977.01 | 0.811288 | 7.546000e-51 | 4.652371e-48 |
| MsG0180003860.01 | MsG0180003984.01 | 0.811802 | 5.835003e-51 | 3.646723e-48 |
| MsG0180003860.01 | MsG0180004016.01 | 0.827957 | 1.174094e-54 | 1.150799e-51 |
| MsG0180003860.01 | MsG0180004050.01 | 0.822413 | 2.400957e-53 | 2.008264e-50 |
| MsG0180003860.01 | MsG0180004598.01 | 0.821794 | 3.339995e-53 | 2.744768e-50 |
| MsG0180003860.01 | MsG0180004645.01 | 0.820614 | 6.248776e-53 | 4.968236e-50 |
| MsG0180003860.01 | MsG0180004767.01 | 0.833612 | 4.825867e-56 | 5.586274e-53 |
| MsG0180003860.01 | MsG0180004991.01 | 0.849387 | 3.342060e-60 | 6.325077e-57 |
| MsG0180003860.01 | MsG0180005049.01 | 0.806618 | 7.535246e-50 | 4.108666e-47 |
| MsG0180003860.01 | MsG0180005125.01 | 0.824153 | 9.415906e-54 | 8.272903e-51 |
| MsG0180003860.01 | MsG0180005337.01 | 0.840282 | 9.551324e-58 | 1.353932e-54 |
| MsG0180003860.01 | MsG0180005443.01 | 0.808501 | 3.002875e-50 | 1.719849e-47 |
| MsG0180003860.01 | MsG0180005451.01 | 0.803178 | 3.946568e-49 | 1.970035e-46 |
| MsG0180003860.01 | MsG0180005493.01 | 0.813976 | 1.948889e-51 | 1.291345e-48 |
| MsG0180003860.01 | MsG0180005765.01 | 0.855569 | 5.776666e-62 | 1.339433e-58 |
| MsG0180003860.01 | MsG0180005949.01 | 0.810486 | 1.125650e-50 | 6.793713e-48 |
| MsG0180003860.01 | MsG0180006013.01 | 0.810256 | 1.262050e-50 | 7.571024e-48 |
| MsG0180003860.01 | MsG0280006305.01 | 0.850315 | 1.838751e-60 | 3.587339e-57 |
| MsG0180003860.01 | MsG0280006728.01 | 0.801197 | 1.008508e-48 | 4.787136e-46 |
| MsG0180003860.01 | MsG0280006759.01 | 0.843968 | 1.010644e-58 | 1.607801e-55 |
| MsG0180003860.01 | MsG0280007024.01 | 0.803027 | 4.240366e-49 | 2.108452e-46 |
| MsG0180003860.01 | MsG0280007161.01 | 0.818428 | 1.970406e-52 | 1.474607e-49 |
| MsG0180003860.01 | MsG0280007609.01 | 0.809044 | 2.298774e-50 | 1.335527e-47 |
| MsG0180003860.01 | MsG0280007790.01 | 0.851301 | 9.702904e-61 | 1.955386e-57 |
| MsG0180003860.01 | MsG0280007876.01 | 0.843941 | 1.028073e-58 | 1.634236e-55 |
| MsG0180003860.01 | MsG0280008134.01 | 0.808467 | 3.053517e-50 | 1.747283e-47 |
| MsG0180003860.01 | MsG0280008239.01 | 0.811363 | 7.269982e-51 | 4.491034e-48 |
| MsG0180003860.01 | MsG0280008286.01 | 0.850790 | 1.352395e-60 | 2.679868e-57 |
| MsG0180003860.01 | MsG0280008327.01 | 0.822890 | 1.859273e-53 | 1.576338e-50 |
| MsG0180003860.01 | MsG0280008502.01 | 0.801294 | 9.635594e-49 | 4.585015e-46 |
| MsG0180003860.01 | MsG0280008518.01 | 0.800704 | 1.272311e-48 | 5.963988e-46 |
| MsG0180003860.01 | MsG0280008885.01 | 0.817315 | 3.515583e-52 | 2.551525e-49 |
| MsG0180003860.01 | MsG0280008909.01 | 0.815967 | 7.047366e-52 | 4.929720e-49 |
| MsG0180003860.01 | MsG0280009111.01 | 0.801814 | 7.538611e-49 | 3.634632e-46 |
| MsG0180003860.01 | MsG0280010002.01 | 0.816210 | 6.219166e-52 | 4.379550e-49 |
| MsG0180003860.01 | MsG0280010633.01 | 0.835347 | 1.768811e-56 | 2.157345e-53 |
| MsG0180003860.01 | MsG0280011037.01 | 0.846506 | 2.080868e-59 | 3.589834e-56 |
| MsG0180003860.01 | MsG0380012124.01 | 0.803318 | 3.691058e-49 | 1.849079e-46 |
| MsG0180003860.01 | MsG0380013579.01 | 0.835566 | 1.557763e-56 | 1.912116e-53 |
| MsG0180003860.01 | MsG0380014330.01 | 0.804335 | 2.270093e-49 | 1.167353e-46 |
| MsG0180003860.01 | MsG0380014539.01 | 0.843525 | 1.328127e-58 | 2.083644e-55 |
| MsG0180003860.01 | MsG0380014541.01 | 0.833085 | 6.528380e-56 | 7.439856e-53 |
| MsG0180003860.01 | MsG0380014576.01 | 0.811564 | 6.573790e-51 | 4.082753e-48 |
| MsG0180003860.01 | MsG0380014885.01 | 0.835497 | 1.621067e-56 | 1.985837e-53 |
| MsG0180003860.01 | MsG0380015512.01 | 0.833475 | 5.221249e-56 | 6.019337e-53 |
| MsG0180003860.01 | MsG0380015607.01 | 0.815294 | 9.950235e-52 | 6.833096e-49 |
| MsG0180003860.01 | MsG0380015793.01 | -0.819053 | 1.421541e-52 | 1.082311e-49 |
| MsG0180003860.01 | MsG0380015831.01 | 0.827516 | 1.498382e-54 | 1.449771e-51 |
| MsG0180003860.01 | MsG0380016055.01 | 0.812655 | 3.801696e-51 | 2.430968e-48 |
| MsG0180003860.01 | MsG0380016227.01 | 0.816637 | 4.990796e-52 | 3.555618e-49 |
| MsG0180003860.01 | MsG0380016389.01 | 0.805186 | 1.507468e-49 | 7.923744e-47 |
| MsG0180003860.01 | MsG0380016483.01 | 0.822544 | 2.238138e-53 | 1.879111e-50 |
| MsG0180003860.01 | MsG0380016513.01 | 0.846559 | 2.012827e-59 | 3.478135e-56 |
| MsG0180003860.01 | MsG0380016971.01 | 0.803865 | 2.842971e-49 | 1.444477e-46 |
| MsG0180003860.01 | MsG0380016985.01 | 0.828574 | 8.334977e-55 | 8.317635e-52 |
| MsG0180003860.01 | MsG0380017003.01 | 0.812293 | 4.560067e-51 | 2.888177e-48 |
| MsG0180003860.01 | MsG0380017431.01 | 0.826701 | 2.347975e-54 | 2.218529e-51 |
| MsG0180003860.01 | MsG0380017476.01 | 0.822742 | 2.013497e-53 | 1.700012e-50 |
| MsG0180003860.01 | MsG0380017643.01 | 0.807869 | 4.094865e-50 | 2.306398e-47 |
| MsG0180003860.01 | MsG0380017719.01 | 0.857689 | 1.375896e-62 | 3.424740e-59 |
| MsG0180003860.01 | MsG0380017797.01 | 0.825076 | 5.707872e-54 | 5.149621e-51 |
| MsG0180003860.01 | MsG0380017864.01 | 0.804764 | 1.846998e-49 | 9.603975e-47 |
| MsG0180003860.01 | MsG0380018001.01 | 0.807665 | 4.524815e-50 | 2.535052e-47 |
| MsG0180003860.01 | MsG0480018235.01 | 0.807520 | 4.856802e-50 | 2.710952e-47 |
| MsG0180003860.01 | MsG0480018289.01 | 0.817209 | 3.713627e-52 | 2.687482e-49 |
| MsG0180003860.01 | MsG0480018462.01 | 0.858538 | 7.692495e-63 | 1.969751e-59 |
| MsG0180003860.01 | MsG0480018477.01 | 0.801719 | 7.886556e-49 | 3.793012e-46 |
| MsG0180003860.01 | MsG0480018846.01 | 0.824854 | 6.442366e-54 | 5.775481e-51 |
| MsG0180003860.01 | MsG0480019404.01 | 0.856583 | 2.917272e-62 | 6.997042e-59 |
| MsG0180003860.01 | MsG0480019642.01 | 0.810970 | 8.845318e-51 | 5.408613e-48 |
| MsG0180003860.01 | MsG0480020331.01 | 0.838647 | 2.539463e-57 | 3.423305e-54 |
| MsG0180003860.01 | MsG0480020372.01 | 0.809233 | 2.094217e-50 | 1.222906e-47 |
| MsG0180003860.01 | MsG0480020591.01 | 0.806822 | 6.824347e-50 | 3.740801e-47 |
| MsG0180003860.01 | MsG0480020791.01 | 0.841722 | 4.000524e-58 | 5.929824e-55 |
| MsG0180003860.01 | MsG0480020917.01 | 0.847271 | 1.285424e-59 | 2.272462e-56 |
| MsG0180003860.01 | MsG0480021432.01 | 0.833221 | 6.038694e-56 | 6.909469e-53 |
| MsG0180003860.01 | MsG0480021772.01 | 0.805539 | 1.271591e-49 | 6.744562e-47 |
| MsG0180003860.01 | MsG0480021812.01 | 0.803403 | 3.545448e-49 | 1.780078e-46 |
| MsG0180003860.01 | MsG0480021832.01 | 0.819401 | 1.183908e-52 | 9.100934e-50 |
| MsG0180003860.01 | MsG0480022115.01 | 0.802545 | 5.332555e-49 | 2.619279e-46 |
| MsG0180003860.01 | MsG0480022228.01 | 0.826613 | 2.464169e-54 | 2.322442e-51 |
| MsG0180003860.01 | MsG0480022678.01 | 0.832777 | 7.789504e-56 | 8.795009e-53 |
| MsG0180003860.01 | MsG0480022717.01 | 0.829599 | 4.703336e-55 | 4.836498e-52 |
| MsG0180003860.01 | MsG0480022719.01 | 0.819881 | 9.199597e-53 | 7.167525e-50 |
| MsG0180003860.01 | MsG0480023032.01 | 0.813341 | 2.688433e-51 | 1.751035e-48 |
| MsG0180003860.01 | MsG0480023240.01 | 0.846141 | 2.616908e-59 | 4.460696e-56 |
| MsG0180003860.01 | MsG0480023245.01 | 0.810088 | 1.371638e-50 | 8.192097e-48 |
| MsG0180003860.01 | MsG0480023415.01 | 0.813881 | 2.044615e-51 | 1.351379e-48 |
| MsG0180003860.01 | MsG0480023447.01 | 0.893685 | 4.990763e-75 | 4.805272e-71 |
| MsG0180003860.01 | MsG0480023500.01 | 0.820901 | 5.367619e-53 | 4.302299e-50 |
| MsG0180003860.01 | MsG0480023559.01 | 0.842835 | 2.028664e-58 | 3.114093e-55 |
| MsG0180003860.01 | MsG0580024191.01 | 0.811594 | 6.475083e-51 | 4.024472e-48 |
| MsG0180003860.01 | MsG0580024353.01 | 0.802396 | 5.722331e-49 | 2.800201e-46 |
| MsG0180003860.01 | MsG0580024374.01 | 0.831725 | 1.418269e-55 | 1.552477e-52 |
| MsG0180003860.01 | MsG0580024583.01 | 0.808997 | 2.352124e-50 | 1.364794e-47 |
| MsG0180003860.01 | MsG0580024618.01 | 0.810375 | 1.189374e-50 | 7.157277e-48 |
| MsG0180003860.01 | MsG0580024721.01 | 0.800102 | 1.687358e-48 | 7.789905e-46 |
| MsG0180003860.01 | MsG0580024819.01 | 0.821702 | 3.507622e-53 | 2.874977e-50 |
| MsG0180003860.01 | MsG0580025903.01 | 0.817211 | 3.708786e-52 | 2.684210e-49 |
| MsG0180003860.01 | MsG0580025989.01 | 0.806284 | 8.863408e-50 | 4.791991e-47 |
| MsG0180003860.01 | MsG0580026157.01 | 0.821420 | 4.075624e-53 | 3.314173e-50 |
| MsG0180003860.01 | MsG0580026225.01 | 0.803071 | 4.152552e-49 | 2.067062e-46 |
| MsG0180003860.01 | MsG0580027319.01 | -0.816069 | 6.687284e-52 | 4.691074e-49 |
| MsG0180003860.01 | MsG0580027441.01 | 0.809728 | 1.638978e-50 | 9.697836e-48 |
| MsG0180003860.01 | MsG0580029148.01 | 0.801309 | 9.568895e-49 | 4.554922e-46 |
| MsG0180003860.01 | MsG0580029661.01 | 0.801129 | 1.041447e-48 | 4.935166e-46 |
| MsG0180003860.01 | MsG0580029783.01 | 0.832837 | 7.526371e-56 | 8.512755e-53 |
| MsG0180003860.01 | MsG0580029801.01 | 0.802466 | 5.537309e-49 | 2.714363e-46 |
| MsG0180003860.01 | MsG0580030003.01 | 0.872335 | 3.441578e-67 | 1.434577e-63 |
| MsG0180003860.01 | MsG0580030160.01 | 0.845371 | 4.233229e-59 | 7.039341e-56 |
| MsG0180003860.01 | MsG0680030436.01 | 0.800544 | 1.371550e-48 | 6.403331e-46 |
| MsG0180003860.01 | MsG0680030684.01 | 0.806160 | 9.415879e-50 | 5.074650e-47 |
| MsG0180003860.01 | MsG0680030841.01 | 0.806673 | 7.337798e-50 | 4.006609e-47 |
| MsG0180003860.01 | MsG0680031133.01 | 0.822731 | 2.025005e-53 | 1.709189e-50 |
| MsG0180003860.01 | MsG0680031508.01 | 0.818750 | 1.665143e-52 | 1.257188e-49 |
| MsG0180003860.01 | MsG0680031651.01 | 0.802652 | 5.068339e-49 | 2.496210e-46 |
| MsG0180003860.01 | MsG0680031699.01 | 0.801706 | 7.933627e-49 | 3.814457e-46 |
| MsG0180003860.01 | MsG0680034061.01 | 0.874475 | 6.561269e-68 | 2.957951e-64 |
| MsG0180003860.01 | MsG0680035306.01 | 0.832510 | 9.073111e-56 | 1.016302e-52 |
| MsG0180003860.01 | MsG0780036240.01 | 0.801858 | 7.382243e-49 | 3.563320e-46 |
| MsG0180003860.01 | MsG0780037503.01 | 0.825946 | 3.552781e-54 | 3.285641e-51 |
| MsG0180003860.01 | MsG0780037755.01 | 0.843576 | 1.286876e-58 | 2.022311e-55 |
| MsG0180003860.01 | MsG0780038565.01 | 0.806669 | 7.351763e-50 | 4.013764e-47 |
| MsG0180003860.01 | MsG0780038630.01 | 0.833511 | 5.113599e-56 | 5.902008e-53 |
| MsG0180003860.01 | MsG0780038837.01 | 0.812315 | 4.511075e-51 | 2.858806e-48 |
| MsG0180003860.01 | MsG0780039340.01 | 0.802971 | 4.355169e-49 | 2.162453e-46 |
| MsG0180003860.01 | MsG0780039570.01 | 0.857999 | 1.113121e-62 | 2.799564e-59 |
| MsG0180003860.01 | MsG0780039587.01 | 0.803272 | 3.773986e-49 | 1.888390e-46 |
| MsG0180003860.01 | MsG0780039950.01 | 0.815695 | 8.103535e-52 | 5.626579e-49 |
| MsG0180003860.01 | MsG0780040312.01 | 0.858202 | 9.688458e-63 | 2.453157e-59 |
| MsG0180003860.01 | MsG0780040411.01 | 0.833283 | 5.827792e-56 | 6.680437e-53 |
| MsG0180003860.01 | MsG0780040519.01 | 0.821320 | 4.299771e-53 | 3.486521e-50 |
| MsG0180003860.01 | MsG0780040597.01 | 0.830687 | 2.551637e-55 | 2.708197e-52 |
| MsG0180003860.01 | MsG0780040845.01 | 0.872189 | 3.849693e-67 | 1.595984e-63 |
| MsG0180003860.01 | MsG0780040856.01 | 0.818214 | 2.203255e-52 | 1.638990e-49 |
| MsG0180003860.01 | MsG0780040861.01 | 0.838089 | 3.536699e-57 | 4.686549e-54 |
| MsG0180003860.01 | MsG0780041161.01 | 0.802932 | 4.437481e-49 | 2.201153e-46 |
| MsG0180003860.01 | MsG0780041222.01 | 0.807778 | 4.280728e-50 | 2.405462e-47 |
| MsG0180003860.01 | MsG0780041295.01 | 0.818405 | 1.993969e-52 | 1.491332e-49 |
| MsG0180003860.01 | MsG0780041423.01 | 0.859364 | 4.353224e-63 | 1.146892e-59 |
| MsG0180003860.01 | MsG0780041469.01 | 0.832330 | 1.005484e-55 | 1.120113e-52 |
| MsG0180003860.01 | MsG0780041490.01 | 0.817068 | 3.994926e-52 | 2.879982e-49 |
| MsG0180003860.01 | MsG0880042206.01 | 0.819839 | 9.407107e-53 | 7.320726e-50 |
| MsG0180003860.01 | MsG0880042552.01 | 0.826009 | 3.432472e-54 | 3.180037e-51 |
| MsG0180003860.01 | MsG0880042829.01 | 0.821988 | 3.011902e-53 | 2.488707e-50 |
| MsG0180003860.01 | MsG0880042848.01 | 0.826471 | 2.664438e-54 | 2.500996e-51 |
| MsG0180003860.01 | MsG0880043163.01 | 0.802678 | 5.005054e-49 | 2.466729e-46 |
| MsG0180003860.01 | MsG0880043532.01 | 0.820394 | 7.020743e-53 | 5.548703e-50 |
| MsG0180003860.01 | MsG0880043886.01 | 0.817986 | 2.480931e-52 | 1.834020e-49 |
| MsG0180003860.01 | MsG0880044075.01 | 0.802887 | 4.531523e-49 | 2.245340e-46 |
| MsG0180003860.01 | MsG0880044990.01 | 0.813321 | 2.715975e-51 | 1.768017e-48 |
| MsG0180003860.01 | MsG0880045619.01 | 0.806945 | 6.427212e-50 | 3.534275e-47 |
| MsG0180003860.01 | MsG0880045631.01 | 0.847346 | 1.225893e-59 | 2.172315e-56 |
| MsG0180003860.01 | MsG0880045656.01 | 0.815425 | 9.304305e-52 | 6.412702e-49 |
| MsG0180003860.01 | MsG0880045951.01 | 0.804356 | 2.246897e-49 | 1.156076e-46 |
| MsG0180003860.01 | MsG0880046027.01 | 0.805881 | 1.077490e-49 | 5.765862e-47 |
| MsG0180003860.01 | MsG0880046068.01 | 0.813945 | 1.979029e-51 | 1.310234e-48 |
| MsG0180003860.01 | MsG0880046113.01 | 0.858694 | 6.909557e-63 | 1.778717e-59 |
| MsG0180003860.01 | MsG0880046177.01 | 0.839278 | 1.743369e-57 | 2.395671e-54 |
| MsG0180003860.01 | MsG0880046317.01 | 0.809177 | 2.152280e-50 | 1.254913e-47 |
| MsG0180003860.01 | MsG0880046684.01 | 0.828284 | 9.790936e-55 | 9.688011e-52 |
| MsG0180003860.01 | MsG0880046762.01 | 0.845366 | 4.246543e-59 | 7.060150e-56 |
| MsG0180003860.01 | MsG0880046933.01 | 0.847403 | 1.182340e-59 | 2.099138e-56 |
| MsG0180003860.01 | MsG0880047016.01 | 0.856979 | 2.230292e-62 | 5.419772e-59 |
| MsG0180003860.01 | MsG0880047590.01 | 0.818549 | 1.850014e-52 | 1.389066e-49 |
| MsG0180003860.01 | MsG0880047607.01 | 0.838481 | 2.803262e-57 | 3.759550e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003860.01.T01 | MTR_1g070190 | 70.000 | 130 | 34 | 3 | 1 | 127 | 1 | 128 | 2.23e-46 | 147 |
| MsG0180003860.01.T01 | MTR_7g096640 | 57.895 | 133 | 45 | 4 | 1 | 127 | 1 | 128 | 8.83e-40 | 131 |
| MsG0180003860.01.T01 | MTR_1g073940 | 36.957 | 138 | 69 | 2 | 1 | 127 | 1 | 131 | 5.07e-20 | 80.9 |
| MsG0180003860.01.T01 | MTR_1g073940 | 54.545 | 55 | 25 | 0 | 69 | 123 | 88 | 142 | 2.60e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003860.01.T01 | AT4G14420 | 51.163 | 129 | 52 | 4 | 1 | 123 | 1 | 124 | 9.62e-33 | 113 |
| MsG0180003860.01.T01 | AT1G04340 | 41.353 | 133 | 67 | 2 | 1 | 127 | 1 | 128 | 1.12e-22 | 87.8 |
| MsG0180003860.01.T01 | AT5G43460 | 37.984 | 129 | 73 | 2 | 1 | 127 | 1 | 124 | 2.10e-19 | 79.0 |
| MsG0180003860.01.T01 | AT5G43460 | 37.984 | 129 | 73 | 2 | 1 | 127 | 1 | 124 | 2.10e-19 | 79.0 |
| MsG0180003860.01.T01 | AT3G23180 | 38.136 | 118 | 61 | 4 | 7 | 124 | 24 | 129 | 5.93e-15 | 68.9 |
| MsG0180003860.01.T01 | AT3G23180 | 38.136 | 118 | 61 | 4 | 7 | 124 | 24 | 129 | 5.93e-15 | 68.9 |
| MsG0180003860.01.T01 | AT3G23190 | 37.931 | 116 | 56 | 2 | 8 | 123 | 25 | 124 | 1.94e-13 | 64.7 |
Find 22 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTAAACTTGTAATTAC+TGG | 0.264664 | 1:-69309704 | MsG0180003860.01.T01:CDS |
| TGGTTATTCTTGTCTGGTTA+TGG | 0.275741 | 1:-69311572 | MsG0180003860.01.T01:intron |
| TTCATATTCGGAAGCTCTTT+CGG | 0.294913 | 1:-69309647 | MsG0180003860.01.T01:CDS |
| GTAAGCAGAGAGAATGAAAA+TGG | 0.336820 | 1:+69312283 | None:intergenic |
| AGCTGCTGGTTATTCTTGTC+TGG | 0.340981 | 1:-69311578 | MsG0180003860.01.T01:CDS |
| CTCTTTCGGAGCTTTGCTGC+TGG | 0.368078 | 1:-69309633 | MsG0180003860.01.T01:intron |
| ATGGCTTTCTCTTCCTTTCT+CGG | 0.374329 | 1:-69312323 | MsG0180003860.01.T01:CDS |
| GCTATTGCTCTGAAGGGCCT+TGG | 0.375035 | 1:-69309680 | MsG0180003860.01.T01:CDS |
| ATTGCTCTGAAGGGCCTTGG+AGG | 0.394581 | 1:-69309677 | MsG0180003860.01.T01:CDS |
| CTAAGAAGAAGAGGAAATCT+AGG | 0.425677 | 1:+69312376 | None:intergenic |
| TTGCTCTGAAGGGCCTTGGA+GGG | 0.470152 | 1:-69309676 | MsG0180003860.01.T01:CDS |
| TGCTCTGAAGGGCCTTGGAG+GGG | 0.472119 | 1:-69309675 | MsG0180003860.01.T01:CDS |
| AGATTAAACTTGTAATTACT+GGG | 0.475430 | 1:-69309703 | MsG0180003860.01.T01:CDS |
| TACTGGGGCTATTGCTCTGA+AGG | 0.491768 | 1:-69309687 | MsG0180003860.01.T01:CDS |
| GAAGAGAACTCTTCCGAGAA+AGG | 0.515382 | 1:+69312310 | None:intergenic |
| TCTTTGTTGCTAAGAAGAAG+AGG | 0.535447 | 1:+69312367 | None:intergenic |
| TCTTCTTCTTAGCAACAAAG+AGG | 0.548813 | 1:-69312365 | MsG0180003860.01.T01:five_prime_UTR |
| TAAGAAGAAGAGGAAATCTA+GGG | 0.602304 | 1:+69312377 | None:intergenic |
| ACTGGGGCTATTGCTCTGAA+GGG | 0.616718 | 1:-69309686 | MsG0180003860.01.T01:CDS |
| TCAATACAGAAGAAAATGCA+AGG | 0.619143 | 1:+69311620 | None:intergenic |
| ATATGAAAAGAACCCCTCCA+AGG | 0.650548 | 1:+69309663 | None:intergenic |
| GATTAAACTTGTAATTACTG+GGG | 0.669590 | 1:-69309702 | MsG0180003860.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAGGAAAATTAAA+CGG | + | Chr1:69309616-69309635 | None:intergenic | 10.0% |
| !! | AACAATTTACATATATTGTT+AGG | + | Chr1:69310698-69310717 | None:intergenic | 15.0% |
| !! | CTATTCATATTATTAAACAA+CGG | - | Chr1:69310353-69310372 | MsG0180003860.01.T01:intron | 15.0% |
| !! | TATTCATATTATTAAACAAC+GGG | - | Chr1:69310354-69310373 | MsG0180003860.01.T01:intron | 15.0% |
| !! | TGAACAATTATAATATCAAA+TGG | + | Chr1:69311280-69311299 | None:intergenic | 15.0% |
| !! | TTTAAACCTTAAAAACATAA+CGG | - | Chr1:69309779-69309798 | MsG0180003860.01.T01:intron | 15.0% |
| !!! | TGCTTTTGTTTAATTTTTTA+TGG | - | Chr1:69310132-69310151 | MsG0180003860.01.T01:intron | 15.0% |
| !!! | TTTATGGTATTGAATTTTAT+AGG | - | Chr1:69310148-69310167 | MsG0180003860.01.T01:intron | 15.0% |
| !! | AATGCAAAAAAGTTAACAAA+TGG | + | Chr1:69311963-69311982 | None:intergenic | 20.0% |
| !! | AATGGAAAAAACTGTATATA+TGG | - | Chr1:69310836-69310855 | MsG0180003860.01.T01:intron | 20.0% |
| !! | AGATTAAACTTGTAATTACT+GGG | - | Chr1:69312129-69312148 | MsG0180003860.01.T01:intron | 20.0% |
| !! | ATAGAAAATAATGAGCAAAA+GGG | + | Chr1:69312075-69312094 | None:intergenic | 20.0% |
| !! | ATGCTTCTTATATAAAAGAA+TGG | + | Chr1:69310965-69310984 | None:intergenic | 20.0% |
| !! | ATTCAGTAAGAATTAAAACA+TGG | + | Chr1:69311104-69311123 | None:intergenic | 20.0% |
| !! | ATTGACTATATGGTTATTAT+CGG | - | Chr1:69310298-69310317 | MsG0180003860.01.T01:intron | 20.0% |
| !! | CAAATAGAAATCAATAAAGA+AGG | + | Chr1:69309591-69309610 | None:intergenic | 20.0% |
| !! | CTATATAGATATAACGAATT+TGG | - | Chr1:69311397-69311416 | MsG0180003860.01.T01:intron | 20.0% |
| !! | TTAAGTTAAATTGAAAAGAC+CGG | - | Chr1:69311915-69311934 | MsG0180003860.01.T01:intron | 20.0% |
| !! | TTCACTAAAGCATAAAAATA+GGG | + | Chr1:69311347-69311366 | None:intergenic | 20.0% |
| !! | TTGTAAAAATCATAACGAAT+TGG | + | Chr1:69312335-69312354 | None:intergenic | 20.0% |
| !!! | AAGTTTTCAATCACTTAAAA+TGG | + | Chr1:69310886-69310905 | None:intergenic | 20.0% |
| !!! | TAATTTGTGATGAAATTGTA+TGG | + | Chr1:69311812-69311831 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTCCTATAGATT+TGG | - | Chr1:69309685-69309704 | MsG0180003860.01.T01:CDS | 20.0% |
| ! | AAACATGCAATAACTACTTA+TGG | - | Chr1:69310750-69310769 | MsG0180003860.01.T01:intron | 25.0% |
| ! | AAATATTGAATGTGATGTAG+GGG | + | Chr1:69310625-69310644 | None:intergenic | 25.0% |
| ! | AACAATAGAAAAAGTTTACC+AGG | + | Chr1:69310996-69311015 | None:intergenic | 25.0% |
| ! | AGAAATATTGAATGTGATGT+AGG | + | Chr1:69310627-69310646 | None:intergenic | 25.0% |
| ! | ATTTCAACAACCAAATCTAT+AGG | + | Chr1:69309698-69309717 | None:intergenic | 25.0% |
| ! | CAGATTAAACTTGTAATTAC+TGG | - | Chr1:69312128-69312147 | MsG0180003860.01.T01:intron | 25.0% |
| ! | CATAGAAAATAATGAGCAAA+AGG | + | Chr1:69312076-69312095 | None:intergenic | 25.0% |
| ! | CTAATTATGGAAACAAAAGT+AGG | - | Chr1:69310800-69310819 | MsG0180003860.01.T01:intron | 25.0% |
| ! | CTTCACTAAAGCATAAAAAT+AGG | + | Chr1:69311348-69311367 | None:intergenic | 25.0% |
| ! | GAAATATTGAATGTGATGTA+GGG | + | Chr1:69310626-69310645 | None:intergenic | 25.0% |
| ! | GATTAAACTTGTAATTACTG+GGG | - | Chr1:69312130-69312149 | MsG0180003860.01.T01:intron | 25.0% |
| ! | GTAGGTAGTATTTAATGAAA+TGG | - | Chr1:69310818-69310837 | MsG0180003860.01.T01:intron | 25.0% |
| ! | TAAACATAGTGTACTACAAT+TGG | + | Chr1:69310573-69310592 | None:intergenic | 25.0% |
| ! | TAACAATCAGTTAAAGTGTA+AGG | - | Chr1:69309814-69309833 | MsG0180003860.01.T01:intron | 25.0% |
| ! | TAATAGCACATTACATAGAA+CGG | + | Chr1:69311068-69311087 | None:intergenic | 25.0% |
| ! | TACACTTTAACTGATTGTTA+AGG | + | Chr1:69309814-69309833 | None:intergenic | 25.0% |
| ! | TAGAAATCAATAAAGAAGGA+AGG | + | Chr1:69309587-69309606 | None:intergenic | 25.0% |
| ! | TATGGCACAAATATTTATTG+TGG | + | Chr1:69311794-69311813 | None:intergenic | 25.0% |
| ! | TATTGTTAGGAAATAGCTTA+TGG | + | Chr1:69310685-69310704 | None:intergenic | 25.0% |
| ! | TCACTAAAGCATAAAAATAG+GGG | + | Chr1:69311346-69311365 | None:intergenic | 25.0% |
| ! | TCTTATATAAAAGAATGGTC+TGG | + | Chr1:69310960-69310979 | None:intergenic | 25.0% |
| ! | TTATTTAATAATCCTGACAG+CGG | - | Chr1:69311308-69311327 | MsG0180003860.01.T01:intron | 25.0% |
| !! | ACTTTTCATCAAATTTACAC+AGG | - | Chr1:69312385-69312404 | MsG0180003860.01.T01:five_prime_UTR | 25.0% |
| !! | TTTTTACAATTATGACAACG+AGG | - | Chr1:69312346-69312365 | MsG0180003860.01.T01:five_prime_UTR | 25.0% |
| AAAGAATAATAAGGACAAGG+TGG | - | Chr1:69311892-69311911 | MsG0180003860.01.T01:intron | 30.0% | |
| AACAACAACAACAACAACAA+TGG | - | Chr1:69309490-69309509 | MsG0180003860.01.T01:CDS | 30.0% | |
| CACATCACATCAGTTATATT+AGG | + | Chr1:69312108-69312127 | None:intergenic | 30.0% | |
| CTGTTATTATGCTAAATTGC+CGG | - | Chr1:69311986-69312005 | MsG0180003860.01.T01:intron | 30.0% | |
| GCTGTCAGGATTATTAAATA+AGG | + | Chr1:69311309-69311328 | None:intergenic | 30.0% | |
| GGAAAAGAATAATAAGGACA+AGG | - | Chr1:69311889-69311908 | MsG0180003860.01.T01:intron | 30.0% | |
| TAACTGATTGTTAAGGTTGT+TGG | + | Chr1:69309807-69309826 | None:intergenic | 30.0% | |
| TAAGAAGAAGAGGAAATCTA+GGG | + | Chr1:69309458-69309477 | None:intergenic | 30.0% | |
| TAAGAATTAAAACATGGCCA+AGG | + | Chr1:69311098-69311117 | None:intergenic | 30.0% | |
| TCAATACAGAAGAAAATGCA+AGG | + | Chr1:69310215-69310234 | None:intergenic | 30.0% | |
| TCAGTTATATTAGGTAACAC+TGG | + | Chr1:69312099-69312118 | None:intergenic | 30.0% | |
| TCCATTCAGAACACTAATTA+TGG | - | Chr1:69310787-69310806 | MsG0180003860.01.T01:intron | 30.0% | |
| TCCTAATAACAAAGTTGCTT+TGG | - | Chr1:69310515-69310534 | MsG0180003860.01.T01:intron | 30.0% | |
| TCGTTCGGAAAAGAATAATA+AGG | - | Chr1:69311883-69311902 | MsG0180003860.01.T01:intron | 30.0% | |
| TTGCATGAATTGTAAATGCA+TGG | - | Chr1:69310466-69310485 | MsG0180003860.01.T01:intron | 30.0% | |
| TTGTAAATGCATGGATATGA+TGG | - | Chr1:69310475-69310494 | MsG0180003860.01.T01:intron | 30.0% | |
| ! | AACTGTTGCAAATCTTTTGT+AGG | - | Chr1:69310181-69310200 | MsG0180003860.01.T01:intron | 30.0% |
| ! | ATATAACGAATTTGGAGTTG+AGG | - | Chr1:69311405-69311424 | MsG0180003860.01.T01:intron | 30.0% |
| ! | GCTTTACTCTAGTTTCAATT+GGG | - | Chr1:69309996-69310015 | MsG0180003860.01.T01:intron | 30.0% |
| ! | TATAACGAATTTGGAGTTGA+GGG | - | Chr1:69311406-69311425 | MsG0180003860.01.T01:intron | 30.0% |
| ! | TCCATAATTAGTGTTCTGAA+TGG | + | Chr1:69310791-69310810 | None:intergenic | 30.0% |
| ! | TTATTATTCTTTTCCGAACG+AGG | + | Chr1:69311884-69311903 | None:intergenic | 30.0% |
| !! | AACTTTGTTATTAGGAACTG+AGG | + | Chr1:69310511-69310530 | None:intergenic | 30.0% |
| !! | AATAATTTTGCTATAGCTGC+TGG | - | Chr1:69310240-69310259 | MsG0180003860.01.T01:intron | 30.0% |
| !! | ACCAAAGCAACTTTGTTATT+AGG | + | Chr1:69310519-69310538 | None:intergenic | 30.0% |
| !! | ATTGTGCATGAATGTTTTTG+AGG | - | Chr1:69310430-69310449 | MsG0180003860.01.T01:intron | 30.0% |
| !! | CAATATTTCTAGCAGTCTAT+TGG | - | Chr1:69310637-69310656 | MsG0180003860.01.T01:intron | 30.0% |
| !! | CTATTGTTGAATTTTTGAGC+TGG | - | Chr1:69311008-69311027 | MsG0180003860.01.T01:intron | 30.0% |
| !! | TTGGATCCGTTATGTTTTTA+AGG | + | Chr1:69309788-69309807 | None:intergenic | 30.0% |
| !!! | TTTCATTTTTTATGCCAGAC+CGG | + | Chr1:69312008-69312027 | None:intergenic | 30.0% |
| AAAAACATGATCTGTCCTTC+AGG | - | Chr1:69311729-69311748 | MsG0180003860.01.T01:intron | 35.0% | |
| AACGGGTAACATTGAATTCA+GGG | - | Chr1:69310371-69310390 | MsG0180003860.01.T01:intron | 35.0% | |
| AATGGACATGTAATATCCAC+TGG | + | Chr1:69311945-69311964 | None:intergenic | 35.0% | |
| CTAAGAAGAAGAGGAAATCT+AGG | + | Chr1:69309459-69309478 | None:intergenic | 35.0% | |
| CTGAGCAAATGAGATGAATA+TGG | + | Chr1:69312248-69312267 | None:intergenic | 35.0% | |
| GAAAATAATGAGCAAAAGGG+AGG | + | Chr1:69312072-69312091 | None:intergenic | 35.0% | |
| GGCTCTTGTACTTTATTGAA+GGG | + | Chr1:69311858-69311877 | None:intergenic | 35.0% | |
| GTAAGCAGAGAGAATGAAAA+TGG | + | Chr1:69309552-69309571 | None:intergenic | 35.0% | |
| TAATAGATGTCCAAATGCAC+TGG | + | Chr1:69310936-69310955 | None:intergenic | 35.0% | |
| TAGCATTGCACTTTATAAGC+TGG | - | Chr1:69311226-69311245 | MsG0180003860.01.T01:intron | 35.0% | |
| TCTTCTTCTTAGCAACAAAG+AGG | - | Chr1:69309467-69309486 | MsG0180003860.01.T01:CDS | 35.0% | |
| TCTTTGTTGCTAAGAAGAAG+AGG | + | Chr1:69309468-69309487 | None:intergenic | 35.0% | |
| TGGTTATTCTTGTCTGGTTA+TGG | - | Chr1:69310260-69310279 | MsG0180003860.01.T01:intron | 35.0% | |
| TGTTTCTTAACCAGTGCATT+TGG | - | Chr1:69310923-69310942 | MsG0180003860.01.T01:intron | 35.0% | |
| TTCATATTCGGAAGCTCTTT+CGG | - | Chr1:69312185-69312204 | MsG0180003860.01.T01:intron | 35.0% | |
| ! | AACTAGAGTAAAGCCTTGTA+TGG | + | Chr1:69309990-69310009 | None:intergenic | 35.0% |
| ! | ACTACAATTGGTTCATTGTG+CGG | + | Chr1:69310561-69310580 | None:intergenic | 35.0% |
| ! | ACTTTTGCAGACACAGATAA+TGG | + | Chr1:69311197-69311216 | None:intergenic | 35.0% |
| ! | ATAACGAATTTGGAGTTGAG+GGG | - | Chr1:69311407-69311426 | MsG0180003860.01.T01:intron | 35.0% |
| ! | CAAACGATTGATTTCGTTGT+GGG | - | Chr1:69309889-69309908 | MsG0180003860.01.T01:intron | 35.0% |
| ! | GGCTTTACTCTAGTTTCAAT+TGG | - | Chr1:69309995-69310014 | MsG0180003860.01.T01:intron | 35.0% |
| ! | TCAAACGATTGATTTCGTTG+TGG | - | Chr1:69309888-69309907 | MsG0180003860.01.T01:intron | 35.0% |
| ! | TGGTTTGTCAGATTCTCTAT+TGG | - | Chr1:69312219-69312238 | MsG0180003860.01.T01:intron | 35.0% |
| ! | TGTGCTATTATACATTGCCT+TGG | - | Chr1:69311078-69311097 | MsG0180003860.01.T01:intron | 35.0% |
| !! | TGTTGAATTTTTGAGCTGGA+AGG | - | Chr1:69311012-69311031 | MsG0180003860.01.T01:intron | 35.0% |
| !!! | AGCGATTAAGTTGCTTTTCT+AGG | - | Chr1:69310096-69310115 | MsG0180003860.01.T01:intron | 35.0% |
| !!! | GCTTTTTTCTACCGTAAACT+CGG | + | Chr1:69310076-69310095 | None:intergenic | 35.0% |
| ACGGGTAACATTGAATTCAG+GGG | - | Chr1:69310372-69310391 | MsG0180003860.01.T01:intron | 40.0% | |
| ACTAATCCAGTGTTACCTGA+AGG | + | Chr1:69311747-69311766 | None:intergenic | 40.0% | |
| AGAAGGAAGGAACTAACTCT+TGG | + | Chr1:69309574-69309593 | None:intergenic | 40.0% | |
| ATATGAAAAGAACCCCTCCA+AGG | + | Chr1:69312172-69312191 | None:intergenic | 40.0% | |
| ATGGAACCTCATACCTATAG+AGG | + | Chr1:69309946-69309965 | None:intergenic | 40.0% | |
| ATGGCTTTCTCTTCCTTTCT+CGG | - | Chr1:69309509-69309528 | MsG0180003860.01.T01:CDS | 40.0% | |
| ATTAGGAACTGAGGAGTTTG+TGG | + | Chr1:69310502-69310521 | None:intergenic | 40.0% | |
| ATTATGCTAAATTGCCGGTC+TGG | - | Chr1:69311991-69312010 | MsG0180003860.01.T01:intron | 40.0% | |
| ATTGAATGTGATGTAGGGGA+AGG | + | Chr1:69310621-69310640 | None:intergenic | 40.0% | |
| CAACGGGTAACATTGAATTC+AGG | - | Chr1:69310370-69310389 | MsG0180003860.01.T01:intron | 40.0% | |
| CACATTACATAGAACGGATG+AGG | + | Chr1:69311062-69311081 | None:intergenic | 40.0% | |
| CATCGAATCCATTCTCAAGT+TGG | - | Chr1:69311475-69311494 | MsG0180003860.01.T01:intron | 40.0% | |
| CGGCTCTTGTACTTTATTGA+AGG | + | Chr1:69311859-69311878 | None:intergenic | 40.0% | |
| GAGAGACTAACATCAATCTC+TGG | + | Chr1:69311511-69311530 | None:intergenic | 40.0% | |
| GGAAGGCTTATGTCATTATG+TGG | - | Chr1:69311029-69311048 | MsG0180003860.01.T01:intron | 40.0% | |
| GGTTCGTTGGATTGACTATA+TGG | - | Chr1:69310288-69310307 | MsG0180003860.01.T01:intron | 40.0% | |
| GTTGAAAGCCAACTTGAGAA+TGG | + | Chr1:69311486-69311505 | None:intergenic | 40.0% | |
| TATGCTCCTCTATAGGTATG+AGG | - | Chr1:69309937-69309956 | MsG0180003860.01.T01:intron | 40.0% | |
| TCTTGTCTGGTTATGGTATG+TGG | - | Chr1:69310267-69310286 | MsG0180003860.01.T01:intron | 40.0% | |
| TGCTCAAGTACCATCTAATC+CGG | + | Chr1:69310048-69310067 | None:intergenic | 40.0% | |
| TGTAATATCCACTGGCATAC+CGG | + | Chr1:69311937-69311956 | None:intergenic | 40.0% | |
| TGTGCAAAGGAATCAAGCTT+TGG | + | Chr1:69311457-69311476 | None:intergenic | 40.0% | |
| ! | AGAATGGATTCGATGTGCAA+AGG | + | Chr1:69311470-69311489 | None:intergenic | 40.0% |
| ! | AGGATTAATCCCGGATTAGA+TGG | - | Chr1:69310035-69310054 | MsG0180003860.01.T01:intron | 40.0% |
| ! | GGAGGGGTTCTTTTCATATT+CGG | - | Chr1:69312173-69312192 | MsG0180003860.01.T01:intron | 40.0% |
| ! | TAACGAATTTGGAGTTGAGG+GGG | - | Chr1:69311408-69311427 | MsG0180003860.01.T01:intron | 40.0% |
| ! | TAAGAAGCATGATGTTAGCC+TGG | - | Chr1:69310975-69310994 | MsG0180003860.01.T01:intron | 40.0% |
| ! | TATCGGCTAACATGTTAGCT+TGG | - | Chr1:69310315-69310334 | MsG0180003860.01.T01:intron | 40.0% |
| !! | GTGCATGAATGTTTTTGAGG+AGG | - | Chr1:69310433-69310452 | MsG0180003860.01.T01:intron | 40.0% |
| ATATCCCTAGTCTACACCAC+CGG | + | Chr1:69309920-69309939 | None:intergenic | 45.0% | |
| ATCTGTCCTTCAGGTAACAC+TGG | - | Chr1:69311738-69311757 | MsG0180003860.01.T01:intron | 45.0% | |
| CTAGGGATATGCTCCTCTAT+AGG | - | Chr1:69309930-69309949 | MsG0180003860.01.T01:intron | 45.0% | |
| GAAGAGAACTCTTCCGAGAA+AGG | + | Chr1:69309525-69309544 | None:intergenic | 45.0% | |
| GCTCAAGTACCATCTAATCC+GGG | + | Chr1:69310047-69310066 | None:intergenic | 45.0% | |
| GGATTAGATGGTACTTGAGC+AGG | - | Chr1:69310047-69310066 | MsG0180003860.01.T01:intron | 45.0% | |
| GGTAACATTGAATTCAGGGG+TGG | - | Chr1:69310375-69310394 | MsG0180003860.01.T01:intron | 45.0% | |
| GGTTATGGTATGTGGTTCGT+TGG | - | Chr1:69310275-69310294 | MsG0180003860.01.T01:intron | 45.0% | |
| GTATTGGGTCAGTCCATACA+AGG | - | Chr1:69309974-69309993 | MsG0180003860.01.T01:intron | 45.0% | |
| GTCTATTGGTCAAACCACCT+TGG | - | Chr1:69310651-69310670 | MsG0180003860.01.T01:intron | 45.0% | |
| GTGCGGTGATTTAGTGTTAG+CGG | + | Chr1:69310544-69310563 | None:intergenic | 45.0% | |
| GTTCCATTCCTCCGTGTATT+GGG | - | Chr1:69309959-69309978 | MsG0180003860.01.T01:intron | 45.0% | |
| TGAGCAGGATACCGAGTTTA+CGG | - | Chr1:69310062-69310081 | MsG0180003860.01.T01:intron | 45.0% | |
| TGCGGTGATTTAGTGTTAGC+GGG | + | Chr1:69310543-69310562 | None:intergenic | 45.0% | |
| ! | AACGAATTTGGAGTTGAGGG+GGG | - | Chr1:69311409-69311428 | MsG0180003860.01.T01:intron | 45.0% |
| ! | AGCTGCTGGTTATTCTTGTC+TGG | - | Chr1:69310254-69310273 | MsG0180003860.01.T01:intron | 45.0% |
| ! | ATTCTTTTCCGAACGAGGCA+CGG | + | Chr1:69311879-69311898 | None:intergenic | 45.0% |
| ! | GTATGGACTGACCCAATACA+CGG | + | Chr1:69309973-69309992 | None:intergenic | 45.0% |
| !! | AGAAATAAAAAAAAAAAAAA+AGG | + | Chr1:69309628-69309647 | None:intergenic | 5.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | Chr1:69311526-69311545 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+GGG | + | Chr1:69311526-69311545 | None:intergenic | 50.0% | |
| AGCTTATGGACCTAGTGCCA+AGG | + | Chr1:69310671-69310690 | None:intergenic | 50.0% | |
| ATGAAGAGAGAACCGCTGTC+AGG | + | Chr1:69311323-69311342 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | Chr1:69311525-69311544 | None:intergenic | 50.0% | |
| GGTTCCATTCCTCCGTGTAT+TGG | - | Chr1:69309958-69309977 | MsG0180003860.01.T01:intron | 50.0% | |
| GTGGACGCTAGGATTAATCC+CGG | - | Chr1:69310026-69310045 | MsG0180003860.01.T01:intron | 50.0% | |
| GTTTCAATTGGGCCTGCTAG+TGG | - | Chr1:69310007-69310026 | MsG0180003860.01.T01:intron | 50.0% | |
| TAATCCTAGCGTCCACTAGC+AGG | + | Chr1:69310022-69310041 | None:intergenic | 50.0% | |
| TACTGGGGCTATTGCTCTGA+AGG | - | Chr1:69312145-69312164 | MsG0180003860.01.T01:intron | 50.0% | |
| TATCCCTAGTCTACACCACC+GGG | + | Chr1:69309919-69309938 | None:intergenic | 50.0% | |
| TGAAAAGACCGGTATGCCAG+TGG | - | Chr1:69311926-69311945 | MsG0180003860.01.T01:intron | 50.0% | |
| TGACCCAATACACGGAGGAA+TGG | + | Chr1:69309965-69309984 | None:intergenic | 50.0% | |
| TTATGGACCTAGTGCCAAGG+TGG | + | Chr1:69310668-69310687 | None:intergenic | 50.0% | |
| ! | ACTGGGGCTATTGCTCTGAA+GGG | - | Chr1:69312146-69312165 | MsG0180003860.01.T01:intron | 50.0% |
| ! | GATTTCGTTGTGGGTTGACC+CGG | - | Chr1:69309898-69309917 | MsG0180003860.01.T01:intron | 50.0% |
| ! | GGTTTCAGTGCTGTTGCAGA+AGG | + | Chr1:69311436-69311455 | None:intergenic | 50.0% |
| AGAGAGAGAGAGAGAGAGGG+GGG | + | Chr1:69311620-69311639 | None:intergenic | 55.0% | |
| CTCTTTCGGAGCTTTGCTGC+TGG | - | Chr1:69312199-69312218 | MsG0180003860.01.T01:intron | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+GGG | + | Chr1:69311621-69311640 | None:intergenic | 55.0% | |
| GGTCAAACCACCTTGGCACT+AGG | - | Chr1:69310658-69310677 | MsG0180003860.01.T01:intron | 55.0% | |
| TACAAGAGCCGTGCCTCGTT+CGG | - | Chr1:69311868-69311887 | MsG0180003860.01.T01:intron | 55.0% | |
| TGACCCGGTGGTGTAGACTA+GGG | - | Chr1:69309913-69309932 | MsG0180003860.01.T01:intron | 55.0% | |
| TGGACTGACCCAATACACGG+AGG | + | Chr1:69309970-69309989 | None:intergenic | 55.0% | |
| TTGACCCGGTGGTGTAGACT+AGG | - | Chr1:69309912-69309931 | MsG0180003860.01.T01:intron | 55.0% | |
| !! | ATTGCTCTGAAGGGCCTTGG+AGG | - | Chr1:69312155-69312174 | MsG0180003860.01.T01:intron | 55.0% |
| !! | GCTATTGCTCTGAAGGGCCT+TGG | - | Chr1:69312152-69312171 | MsG0180003860.01.T01:intron | 55.0% |
| !! | TTGCTCTGAAGGGCCTTGGA+GGG | - | Chr1:69312156-69312175 | MsG0180003860.01.T01:intron | 55.0% |
| GAGAGAGAGAGAGAGAGGGG+GGG | + | Chr1:69311619-69311638 | None:intergenic | 60.0% | |
| ! | TTCGTTGTGGGTTGACCCGG+TGG | - | Chr1:69309901-69309920 | MsG0180003860.01.T01:intron | 60.0% |
| !! | TGCTCTGAAGGGCCTTGGAG+GGG | - | Chr1:69312157-69312176 | MsG0180003860.01.T01:intron | 60.0% |
| AGAGAGAGAGAGAGGGGGGG+AGG | + | Chr1:69311616-69311635 | None:intergenic | 65.0% | |
| GAGAGAGAGAGAGGGGGGGA+GGG | + | Chr1:69311615-69311634 | None:intergenic | 65.0% | |
| ! | TGGGCCTGCTAGTGGACGCT+AGG | - | Chr1:69310015-69310034 | MsG0180003860.01.T01:intron | 65.0% |
| AGAGAGAGAGGGGGGGAGGG+AGG | + | Chr1:69311612-69311631 | None:intergenic | 70.0% | |
| GAGAGAGAGGGGGGGAGGGA+GGG | + | Chr1:69311611-69311630 | None:intergenic | 70.0% | |
| AGAGAGGGGGGGAGGGAGGG+AGG | + | Chr1:69311608-69311627 | None:intergenic | 75.0% | |
| AGGGAGGGAGGGAGGGAGGG+AGG | + | Chr1:69311588-69311607 | None:intergenic | 75.0% | |
| GAGAGGGGGGGAGGGAGGGA+GGG | + | Chr1:69311607-69311626 | None:intergenic | 75.0% | |
| GGGAGGGAGGGAGGGAGGGA+GGG | + | Chr1:69311587-69311606 | None:intergenic | 75.0% | |
| ! | AGGGGGGGAGGGAGGGAGGG+AGG | + | Chr1:69311604-69311623 | None:intergenic | 80.0% |
| ! | GGGGAGGGAGGGAGGGAGGG+AGG | + | Chr1:69311600-69311619 | None:intergenic | 80.0% |
| ! | GGGGGGGAGGGAGGGAGGGA+GGG | + | Chr1:69311603-69311622 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 69309412 | 69312442 | 69309412 | ID=MsG0180003860.01;Name=MsG0180003860.01 |
| Chr1 | mRNA | 69309412 | 69312442 | 69309412 | ID=MsG0180003860.01.T01;Parent=MsG0180003860.01;Name=MsG0180003860.01.T01;_AED=0.44;_eAED=0.59;_QI=97|0.33|0.5|1|0|0|4|0|134 |
| Chr1 | exon | 69309412 | 69309546 | 69309412 | ID=MsG0180003860.01.T01:exon:52133;Parent=MsG0180003860.01.T01 |
| Chr1 | exon | 69309634 | 69309723 | 69309634 | ID=MsG0180003860.01.T01:exon:52132;Parent=MsG0180003860.01.T01 |
| Chr1 | exon | 69311573 | 69311684 | 69311573 | ID=MsG0180003860.01.T01:exon:52131;Parent=MsG0180003860.01.T01 |
| Chr1 | exon | 69312278 | 69312442 | 69312278 | ID=MsG0180003860.01.T01:exon:52130;Parent=MsG0180003860.01.T01 |
| Chr1 | five_prime_UTR | 69312346 | 69312442 | 69312346 | ID=MsG0180003860.01.T01:five_prime_utr;Parent=MsG0180003860.01.T01 |
| Chr1 | CDS | 69312278 | 69312345 | 69312278 | ID=MsG0180003860.01.T01:cds;Parent=MsG0180003860.01.T01 |
| Chr1 | CDS | 69311573 | 69311684 | 69311573 | ID=MsG0180003860.01.T01:cds;Parent=MsG0180003860.01.T01 |
| Chr1 | CDS | 69309634 | 69309723 | 69309634 | ID=MsG0180003860.01.T01:cds;Parent=MsG0180003860.01.T01 |
| Chr1 | CDS | 69309412 | 69309546 | 69309412 | ID=MsG0180003860.01.T01:cds;Parent=MsG0180003860.01.T01 |
| Gene Sequence |
| Protein sequence |
