Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035577.01.T01 | PNX79273.1 | 92.523 | 107 | 8 | 0 | 1 | 107 | 1 | 107 | 5.36E-67 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035577.01.T01 | Q94C12 | 78.351 | 97 | 21 | 0 | 1 | 97 | 1 | 97 | 3.97E-54 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035577.01.T01 | A0A2K3LL73 | 92.523 | 107 | 8 | 0 | 1 | 107 | 1 | 107 | 2.56e-67 | 207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048152.01 | MsG0680035577.01 | 0.805866 | 1.085392e-49 | 5.806014e-47 |
| MsG0080048383.01 | MsG0680035577.01 | 0.843306 | 1.519672e-58 | 2.368036e-55 |
| MsG0080048687.01 | MsG0680035577.01 | 0.869737 | 2.474418e-66 | 9.384322e-63 |
| MsG0080048784.01 | MsG0680035577.01 | 0.841028 | 6.092306e-58 | 8.837436e-55 |
| MsG0180000144.01 | MsG0680035577.01 | 0.811331 | 7.384983e-51 | 4.558220e-48 |
| MsG0180000155.01 | MsG0680035577.01 | 0.819821 | 9.498172e-53 | 7.387703e-50 |
| MsG0180000205.01 | MsG0680035577.01 | 0.800293 | 1.542787e-48 | 7.157424e-46 |
| MsG0180000339.01 | MsG0680035577.01 | 0.834778 | 2.461599e-56 | 2.950788e-53 |
| MsG0180000580.01 | MsG0680035577.01 | 0.823185 | 1.587150e-53 | 1.356842e-50 |
| MsG0180000611.01 | MsG0680035577.01 | 0.814342 | 1.617618e-51 | 1.082621e-48 |
| MsG0180000806.01 | MsG0680035577.01 | 0.837292 | 5.665100e-57 | 7.325382e-54 |
| MsG0180000835.01 | MsG0680035577.01 | 0.804197 | 2.424543e-49 | 1.242349e-46 |
| MsG0180000836.01 | MsG0680035577.01 | 0.804634 | 1.965834e-49 | 1.018700e-46 |
| MsG0180001260.01 | MsG0680035577.01 | 0.858892 | 6.030408e-63 | 1.562898e-59 |
| MsG0180001599.01 | MsG0680035577.01 | 0.845711 | 3.423792e-59 | 5.756996e-56 |
| MsG0180002547.01 | MsG0680035577.01 | 0.868208 | 7.745550e-66 | 2.778862e-62 |
| MsG0180002794.01 | MsG0680035577.01 | 0.809952 | 1.466973e-50 | 8.731095e-48 |
| MsG0180003181.01 | MsG0680035577.01 | 0.803801 | 2.931664e-49 | 1.487019e-46 |
| MsG0180003548.01 | MsG0680035577.01 | 0.803300 | 3.723586e-49 | 1.864489e-46 |
| MsG0180003744.01 | MsG0680035577.01 | 0.800779 | 1.227927e-48 | 5.767025e-46 |
| MsG0180003793.01 | MsG0680035577.01 | 0.854805 | 9.638381e-62 | 2.179105e-58 |
| MsG0180003922.01 | MsG0680035577.01 | 0.804210 | 2.409600e-49 | 1.235107e-46 |
| MsG0180003932.01 | MsG0680035577.01 | 0.818415 | 1.983326e-52 | 1.483817e-49 |
| MsG0180004009.01 | MsG0680035577.01 | 0.864197 | 1.445512e-64 | 4.500362e-61 |
| MsG0180004016.01 | MsG0680035577.01 | 0.841475 | 4.647235e-58 | 6.836886e-55 |
| MsG0180004050.01 | MsG0680035577.01 | 0.807891 | 4.049659e-50 | 2.282270e-47 |
| MsG0180004128.01 | MsG0680035577.01 | 0.838807 | 2.308872e-57 | 3.127429e-54 |
| MsG0180004130.01 | MsG0680035577.01 | 0.814006 | 1.919202e-51 | 1.272765e-48 |
| MsG0180004398.01 | MsG0680035577.01 | 0.817706 | 2.869082e-52 | 2.104821e-49 |
| MsG0180004481.01 | MsG0680035577.01 | 0.822991 | 1.761415e-53 | 1.497656e-50 |
| MsG0180004482.01 | MsG0680035577.01 | 0.819428 | 1.167584e-52 | 8.982399e-50 |
| MsG0180004767.01 | MsG0680035577.01 | 0.836656 | 8.234763e-57 | 1.044451e-53 |
| MsG0180004854.01 | MsG0680035577.01 | 0.851118 | 1.092608e-60 | 2.188666e-57 |
| MsG0180004861.01 | MsG0680035577.01 | 0.897169 | 1.824116e-76 | 2.036130e-72 |
| MsG0180005049.01 | MsG0680035577.01 | 0.813133 | 2.987091e-51 | 1.934430e-48 |
| MsG0180005262.01 | MsG0680035577.01 | 0.840894 | 6.604223e-58 | 9.541578e-55 |
| MsG0180005337.01 | MsG0680035577.01 | 0.816172 | 6.341282e-52 | 4.460844e-49 |
| MsG0180005575.01 | MsG0680035577.01 | 0.810684 | 1.019864e-50 | 6.188215e-48 |
| MsG0180005746.01 | MsG0680035577.01 | 0.815617 | 8.435143e-52 | 5.844756e-49 |
| MsG0180006013.01 | MsG0680035577.01 | 0.804688 | 1.915678e-49 | 9.941409e-47 |
| MsG0280006305.01 | MsG0680035577.01 | 0.803023 | 4.247499e-49 | 2.111773e-46 |
| MsG0280010776.01 | MsG0680035577.01 | 0.824100 | 9.690359e-54 | 8.500801e-51 |
| MsG0280010801.01 | MsG0680035577.01 | 0.806588 | 7.648823e-50 | 4.167356e-47 |
| MsG0380011581.01 | MsG0680035577.01 | 0.803535 | 3.328589e-49 | 1.676935e-46 |
| MsG0380011614.01 | MsG0680035577.01 | 0.860640 | 1.794242e-63 | 4.938579e-60 |
| MsG0380011747.01 | MsG0680035577.01 | 0.829406 | 5.239343e-55 | 5.357744e-52 |
| MsG0380011927.01 | MsG0680035577.01 | 0.811285 | 7.557401e-51 | 4.659049e-48 |
| MsG0380012073.01 | MsG0680035577.01 | 0.827233 | 1.752085e-54 | 1.681402e-51 |
| MsG0380013085.01 | MsG0680035577.01 | 0.825813 | 3.819159e-54 | 3.518677e-51 |
| MsG0380013579.01 | MsG0680035577.01 | 0.857049 | 2.126511e-62 | 5.179872e-59 |
| MsG0380013641.01 | MsG0680035577.01 | 0.846018 | 2.827280e-59 | 4.800968e-56 |
| MsG0380014175.01 | MsG0680035577.01 | 0.842651 | 2.269911e-58 | 3.464354e-55 |
| MsG0380014778.01 | MsG0680035577.01 | 0.847516 | 1.100771e-59 | 1.961574e-56 |
| MsG0380014875.01 | MsG0680035577.01 | 0.841182 | 5.547298e-58 | 8.085793e-55 |
| MsG0680030968.01 | MsG0680035577.01 | 0.853760 | 1.930614e-61 | 4.216194e-58 |
| MsG0680031000.01 | MsG0680035577.01 | 0.802340 | 5.878156e-49 | 2.872303e-46 |
| MsG0680031507.01 | MsG0680035577.01 | 0.848754 | 5.009160e-60 | 9.287704e-57 |
| MsG0680031508.01 | MsG0680035577.01 | 0.804867 | 1.757489e-49 | 9.163479e-47 |
| MsG0680031628.01 | MsG0680035577.01 | 0.836132 | 1.119241e-56 | 1.397648e-53 |
| MsG0680031699.01 | MsG0680035577.01 | 0.833262 | 5.900704e-56 | 6.759571e-53 |
| MsG0680031964.01 | MsG0680035577.01 | 0.815924 | 7.204775e-52 | 5.033671e-49 |
| MsG0680034445.01 | MsG0680035577.01 | 0.808366 | 3.208632e-50 | 1.831254e-47 |
| MsG0680034671.01 | MsG0680035577.01 | 0.833548 | 5.007389e-56 | 5.785728e-53 |
| MsG0680035306.01 | MsG0680035577.01 | 0.852200 | 5.394942e-61 | 1.118859e-57 |
| MsG0680035574.01 | MsG0680035577.01 | 0.839967 | 1.154063e-57 | 1.620142e-54 |
| MsG0680035577.01 | MsG0680035876.01 | 0.818793 | 1.628276e-52 | 1.230806e-49 |
| MsG0680035577.01 | MsG0680035888.01 | 0.883601 | 3.908363e-71 | 2.494800e-67 |
| MsG0680035577.01 | MsG0780036240.01 | 0.836787 | 7.625257e-57 | 9.711403e-54 |
| MsG0680035577.01 | MsG0780037240.01 | 0.845410 | 4.131643e-59 | 6.879318e-56 |
| MsG0680035577.01 | MsG0780038400.01 | 0.841613 | 4.272530e-58 | 6.312652e-55 |
| MsG0680035577.01 | MsG0780038565.01 | 0.812260 | 4.636611e-51 | 2.934019e-48 |
| MsG0680035577.01 | MsG0780038603.01 | 0.805584 | 1.244042e-49 | 6.606373e-47 |
| MsG0680035577.01 | MsG0780038948.01 | 0.814932 | 1.197263e-51 | 8.141060e-49 |
| MsG0680035577.01 | MsG0780039340.01 | 0.803756 | 2.995456e-49 | 1.517638e-46 |
| MsG0680035577.01 | MsG0780039442.01 | 0.817411 | 3.343231e-52 | 2.433028e-49 |
| MsG0680035577.01 | MsG0780039643.01 | 0.809728 | 1.639696e-50 | 9.701797e-48 |
| MsG0680035577.01 | MsG0780039845.01 | 0.805724 | 1.162757e-49 | 6.197378e-47 |
| MsG0680035577.01 | MsG0780040070.01 | 0.813377 | 2.639214e-51 | 1.720742e-48 |
| MsG0680035577.01 | MsG0780040110.01 | 0.816491 | 5.381430e-52 | 3.818496e-49 |
| MsG0680035577.01 | MsG0780040411.01 | 0.827701 | 1.352887e-54 | 1.316045e-51 |
| MsG0680035577.01 | MsG0780040569.01 | 0.863326 | 2.695953e-64 | 8.141541e-61 |
| MsG0680035577.01 | MsG0780040718.01 | 0.812138 | 4.929166e-51 | 3.108809e-48 |
| MsG0680035577.01 | MsG0780040845.01 | 0.851689 | 7.536078e-61 | 1.537631e-57 |
| MsG0680035577.01 | MsG0780040926.01 | 0.809256 | 2.070037e-50 | 1.209503e-47 |
| MsG0680035577.01 | MsG0780041223.01 | 0.873537 | 1.362116e-67 | 5.933261e-64 |
| MsG0680035577.01 | MsG0780041268.01 | 0.857373 | 1.706318e-62 | 4.202084e-59 |
| MsG0680035577.01 | MsG0780041392.01 | 0.807665 | 4.524815e-50 | 2.535052e-47 |
| MsG0680035577.01 | MsG0780041423.01 | 0.828553 | 8.434899e-55 | 8.412077e-52 |
| MsG0680035577.01 | MsG0780041796.01 | 0.810676 | 1.023992e-50 | 6.211940e-48 |
| MsG0680035577.01 | MsG0880041949.01 | 0.813016 | 3.168197e-51 | 2.045366e-48 |
| MsG0680035577.01 | MsG0880042033.01 | 0.879643 | 1.054358e-69 | 5.760476e-66 |
| MsG0680035577.01 | MsG0880042128.01 | 0.811396 | 7.148350e-51 | 4.420077e-48 |
| MsG0680035577.01 | MsG0880042207.01 | 0.802194 | 6.296866e-49 | 3.065311e-46 |
| MsG0680035577.01 | MsG0880042519.01 | 0.829340 | 5.438150e-55 | 5.550607e-52 |
| MsG0680035577.01 | MsG0880042760.01 | 0.835077 | 2.070258e-56 | 2.504018e-53 |
| MsG0680035577.01 | MsG0880042795.01 | 0.801855 | 7.395400e-49 | 3.569325e-46 |
| MsG0680035577.01 | MsG0880042891.01 | 0.820674 | 6.053266e-53 | 4.820780e-50 |
| MsG0680035577.01 | MsG0880042978.01 | 0.813011 | 3.176264e-51 | 2.050313e-48 |
| MsG0680035577.01 | MsG0880042991.01 | 0.871296 | 7.615745e-67 | 3.056475e-63 |
| MsG0680035577.01 | MsG0880043081.01 | 0.820615 | 6.247923e-53 | 4.967656e-50 |
| MsG0680035577.01 | MsG0880043748.01 | 0.824390 | 8.283515e-54 | 7.326692e-51 |
| MsG0680035577.01 | MsG0880044975.01 | 0.841275 | 5.246264e-58 | 7.668855e-55 |
| MsG0680035577.01 | MsG0880044990.01 | 0.854316 | 1.334905e-61 | 2.969236e-58 |
| MsG0680035577.01 | MsG0880045145.01 | 0.839832 | 1.251596e-57 | 1.749503e-54 |
| MsG0680035577.01 | MsG0880045294.01 | 0.824748 | 6.822696e-54 | 6.098211e-51 |
| MsG0680035577.01 | MsG0880045619.01 | 0.821852 | 3.238458e-53 | 2.665806e-50 |
| MsG0680035577.01 | MsG0880045656.01 | 0.912324 | 2.220121e-83 | 4.967743e-79 |
| MsG0680035577.01 | MsG0880045684.01 | 0.818418 | 1.980911e-52 | 1.482082e-49 |
| MsG0680035577.01 | MsG0880045951.01 | 0.806170 | 9.369999e-50 | 5.051277e-47 |
| MsG0680035577.01 | MsG0880046068.01 | 0.815107 | 1.095277e-51 | 7.482715e-49 |
| MsG0680035577.01 | MsG0880046074.01 | 0.823325 | 1.472221e-53 | 1.263509e-50 |
| MsG0680035577.01 | MsG0880046177.01 | 0.805889 | 1.073556e-49 | 5.745903e-47 |
| MsG0680035577.01 | MsG0880046237.01 | 0.800689 | 1.281295e-48 | 6.004020e-46 |
| MsG0680035577.01 | MsG0880047212.01 | 0.809069 | 2.270114e-50 | 1.319783e-47 |
| MsG0680035577.01 | MsG0880047388.01 | 0.805661 | 1.198701e-49 | 6.378224e-47 |
| MsG0680035577.01 | MsG0880047470.01 | 0.832871 | 7.379419e-56 | 8.355538e-53 |
| MsG0680035577.01 | MsG0880047743.01 | 0.828322 | 9.587648e-55 | 9.497130e-52 |
| MsG0480018477.01 | MsG0680035577.01 | 0.841679 | 4.105952e-58 | 6.078026e-55 |
| MsG0480020675.01 | MsG0680035577.01 | 0.802171 | 6.366971e-49 | 3.097718e-46 |
| MsG0480021006.01 | MsG0680035577.01 | 0.818187 | 2.234093e-52 | 1.660772e-49 |
| MsG0480021037.01 | MsG0680035577.01 | 0.801894 | 7.260145e-49 | 3.507533e-46 |
| MsG0480021706.01 | MsG0680035577.01 | 0.825061 | 5.754303e-54 | 5.189114e-51 |
| MsG0480021735.01 | MsG0680035577.01 | 0.815257 | 1.014049e-51 | 6.956492e-49 |
| MsG0480021832.01 | MsG0680035577.01 | 0.817690 | 2.893586e-52 | 2.121838e-49 |
| MsG0480022223.01 | MsG0680035577.01 | 0.837750 | 4.321997e-57 | 5.669073e-54 |
| MsG0480022292.01 | MsG0680035577.01 | 0.813360 | 2.662863e-51 | 1.735338e-48 |
| MsG0480022672.01 | MsG0680035577.01 | 0.831142 | 1.973736e-55 | 2.123071e-52 |
| MsG0480022678.01 | MsG0680035577.01 | 0.812283 | 4.583220e-51 | 2.902111e-48 |
| MsG0480022696.01 | MsG0680035577.01 | 0.834674 | 2.615261e-56 | 3.125316e-53 |
| MsG0480022960.01 | MsG0680035577.01 | 0.890196 | 1.226342e-73 | 1.020767e-69 |
| MsG0480023149.01 | MsG0680035577.01 | 0.824473 | 7.918793e-54 | 7.020907e-51 |
| MsG0480023221.01 | MsG0680035577.01 | 0.878451 | 2.778130e-69 | 1.451534e-65 |
| MsG0480023240.01 | MsG0680035577.01 | 0.839332 | 1.687859e-57 | 2.323414e-54 |
| MsG0480023387.01 | MsG0680035577.01 | 0.893434 | 6.311557e-75 | 6.009650e-71 |
| MsG0480023447.01 | MsG0680035577.01 | 0.806564 | 7.738288e-50 | 4.213642e-47 |
| MsG0480023559.01 | MsG0680035577.01 | 0.813947 | 1.977764e-51 | 1.309449e-48 |
| MsG0480023769.01 | MsG0680035577.01 | 0.803099 | 4.097384e-49 | 2.041072e-46 |
| MsG0480023771.01 | MsG0680035577.01 | 0.815558 | 8.695092e-52 | 6.014498e-49 |
| MsG0480023844.01 | MsG0680035577.01 | 0.827303 | 1.685229e-54 | 1.620625e-51 |
| MsG0580024339.01 | MsG0680035577.01 | 0.824706 | 6.978932e-54 | 6.230426e-51 |
| MsG0580024619.01 | MsG0680035577.01 | 0.819673 | 1.026246e-52 | 7.949241e-50 |
| MsG0580024727.01 | MsG0680035577.01 | 0.853128 | 2.931424e-61 | 6.267751e-58 |
| MsG0580025268.01 | MsG0680035577.01 | 0.832104 | 1.143624e-55 | 1.265592e-52 |
| MsG0580025756.01 | MsG0680035577.01 | 0.802332 | 5.899329e-49 | 2.882100e-46 |
| MsG0380015435.01 | MsG0680035577.01 | 0.824059 | 9.909201e-54 | 8.682460e-51 |
| MsG0380015512.01 | MsG0680035577.01 | 0.800138 | 1.659041e-48 | 7.666339e-46 |
| MsG0380015818.01 | MsG0680035577.01 | 0.805324 | 1.410048e-49 | 7.438074e-47 |
| MsG0380016005.01 | MsG0680035577.01 | 0.843972 | 1.008412e-58 | 1.604397e-55 |
| MsG0380016067.01 | MsG0680035577.01 | 0.836485 | 9.104980e-57 | 1.148994e-53 |
| MsG0380016290.01 | MsG0680035577.01 | 0.876486 | 1.343700e-68 | 6.527311e-65 |
| MsG0380016505.01 | MsG0680035577.01 | 0.827729 | 1.332036e-54 | 1.296846e-51 |
| MsG0380016513.01 | MsG0680035577.01 | 0.817398 | 3.367332e-52 | 2.449586e-49 |
| MsG0380016559.01 | MsG0680035577.01 | 0.808652 | 2.787856e-50 | 1.602874e-47 |
| MsG0380016560.01 | MsG0680035577.01 | 0.833680 | 4.640756e-56 | 5.382985e-53 |
| MsG0380016604.01 | MsG0680035577.01 | 0.846788 | 1.742520e-59 | 3.033494e-56 |
| MsG0380017476.01 | MsG0680035577.01 | 0.817762 | 2.787659e-52 | 2.048264e-49 |
| MsG0380017540.01 | MsG0680035577.01 | 0.809919 | 1.491360e-50 | 8.868375e-48 |
| MsG0380017797.01 | MsG0680035577.01 | 0.823850 | 1.109518e-53 | 9.665654e-51 |
| MsG0380017947.01 | MsG0680035577.01 | 0.828755 | 7.534717e-55 | 7.557981e-52 |
| MsG0380018033.01 | MsG0680035577.01 | 0.860226 | 2.394965e-63 | 6.498771e-60 |
| MsG0480018110.01 | MsG0680035577.01 | 0.802017 | 6.848306e-49 | 3.318836e-46 |
| MsG0480018235.01 | MsG0680035577.01 | 0.838756 | 2.380956e-57 | 3.220020e-54 |
| MsG0480018278.01 | MsG0680035577.01 | 0.815482 | 9.037436e-52 | 6.238891e-49 |
| MsG0480018335.01 | MsG0680035577.01 | 0.831240 | 1.867014e-55 | 2.014026e-52 |
| MsG0580026157.01 | MsG0680035577.01 | 0.801225 | 9.955334e-49 | 4.728829e-46 |
| MsG0580026226.01 | MsG0680035577.01 | 0.814636 | 1.393104e-51 | 9.397685e-49 |
| MsG0580026485.01 | MsG0680035577.01 | 0.834358 | 3.139320e-56 | 3.716680e-53 |
| MsG0580028094.01 | MsG0680035577.01 | 0.811198 | 7.893588e-51 | 4.855306e-48 |
| MsG0580028597.01 | MsG0680035577.01 | 0.836024 | 1.192176e-56 | 1.483691e-53 |
| MsG0580028897.01 | MsG0680035577.01 | 0.813511 | 2.466132e-51 | 1.613744e-48 |
| MsG0580029132.01 | MsG0680035577.01 | 0.824711 | 6.959879e-54 | 6.214306e-51 |
| MsG0580029370.01 | MsG0680035577.01 | 0.803202 | 3.900670e-49 | 1.948320e-46 |
| MsG0280006483.01 | MsG0680035577.01 | 0.809940 | 1.475617e-50 | 8.779647e-48 |
| MsG0280006545.01 | MsG0680035577.01 | 0.802747 | 4.843851e-49 | 2.391573e-46 |
| MsG0280006809.01 | MsG0680035577.01 | 0.800100 | 1.688354e-48 | 7.794219e-46 |
| MsG0280006993.01 | MsG0680035577.01 | 0.839309 | 1.711957e-57 | 2.354774e-54 |
| MsG0280007161.01 | MsG0680035577.01 | 0.824899 | 6.285090e-54 | 5.641963e-51 |
| MsG0280007321.01 | MsG0680035577.01 | 0.815934 | 7.166960e-52 | 5.008806e-49 |
| MsG0280007452.01 | MsG0680035577.01 | 0.803715 | 3.054226e-49 | 1.545729e-46 |
| MsG0280007527.01 | MsG0680035577.01 | 0.822937 | 1.813428e-53 | 1.539524e-50 |
| MsG0280007847.01 | MsG0680035577.01 | 0.896339 | 4.057677e-76 | 4.370349e-72 |
| MsG0280008118.01 | MsG0680035577.01 | 0.838919 | 2.160208e-57 | 2.935951e-54 |
| MsG0280008312.01 | MsG0680035577.01 | 0.821463 | 3.983896e-53 | 3.243291e-50 |
| MsG0280008429.01 | MsG0680035577.01 | 0.804497 | 2.099809e-49 | 1.084273e-46 |
| MsG0280008909.01 | MsG0680035577.01 | 0.837002 | 6.718595e-57 | 8.612161e-54 |
| MsG0280009141.01 | MsG0680035577.01 | 0.803599 | 3.227310e-49 | 1.628601e-46 |
| MsG0280009575.01 | MsG0680035577.01 | 0.888271 | 6.845029e-73 | 5.267348e-69 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035577.01.T01 | MTR_6g084520 | 100.000 | 97 | 0 | 0 | 1 | 97 | 1 | 97 | 6.16e-70 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035577.01.T01 | AT3G18410 | 78.351 | 97 | 21 | 0 | 1 | 97 | 1 | 97 | 4.05e-55 | 167 |
| MsG0680035577.01.T01 | AT3G18410 | 78.351 | 97 | 21 | 0 | 1 | 97 | 1 | 97 | 4.05e-55 | 167 |
| MsG0680035577.01.T01 | AT1G49140 | 76.289 | 97 | 23 | 0 | 1 | 97 | 1 | 97 | 1.02e-53 | 163 |
| MsG0680035577.01.T01 | AT1G49140 | 76.289 | 97 | 23 | 0 | 1 | 97 | 1 | 97 | 1.02e-53 | 163 |
Find 28 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGCTTCGTTGGTGTTAT+AGG | 0.264593 | 6:+108667719 | MsG0680035577.01.T01:CDS |
| GGTCGTCACCCTTCTCTTCA+TGG | 0.286257 | 6:+108667829 | MsG0680035577.01.T01:CDS |
| AGTCTACTAGAGGGATTGGT+TGG | 0.361455 | 6:+108667797 | MsG0680035577.01.T01:CDS |
| ATCGCCACTGGATCTTTGTA+TGG | 0.363135 | 6:-108667628 | None:intergenic |
| TTGTTGATTAAGGGTATGTT+TGG | 0.369681 | 6:+108668066 | MsG0680035577.01.T01:intron |
| CAAAGATCCAGTGGCGATGC+TGG | 0.412298 | 6:+108667633 | MsG0680035577.01.T01:CDS |
| CGTTGGTGTTATAGGATTGA+AGG | 0.432641 | 6:+108667727 | MsG0680035577.01.T01:CDS |
| GTCTACTAGAGGGATTGGTT+GGG | 0.443343 | 6:+108667798 | MsG0680035577.01.T01:CDS |
| CTCATTTCCAGCATCGCCAC+TGG | 0.446593 | 6:-108667640 | None:intergenic |
| CTTGAGTCTACTAGAGGGAT+TGG | 0.477507 | 6:+108667793 | MsG0680035577.01.T01:CDS |
| GGGAAGGAAGAAGGGGTATG+TGG | 0.484400 | 6:+108667564 | MsG0680035577.01.T01:CDS |
| TCTACTAGAGGGATTGGTTG+GGG | 0.490687 | 6:+108667799 | MsG0680035577.01.T01:CDS |
| CAGTGGCGATGCTGGAAATG+AGG | 0.508085 | 6:+108667641 | MsG0680035577.01.T01:CDS |
| TTCGCCGGATCGAAATCATC+TGG | 0.510493 | 6:-108667604 | None:intergenic |
| GGATCTTTGTATGGGTTCGC+CGG | 0.524941 | 6:-108667619 | None:intergenic |
| TCGCCACTGGATCTTTGTAT+GGG | 0.545031 | 6:-108667627 | None:intergenic |
| GTTGGTGTTATAGGATTGAA+GGG | 0.554470 | 6:+108667728 | MsG0680035577.01.T01:CDS |
| AAACACAAACCATGAAGAGA+AGG | 0.554780 | 6:-108667838 | None:intergenic |
| TTATTCGTGAAAAGCTTCGT+TGG | 0.561335 | 6:+108667710 | MsG0680035577.01.T01:CDS |
| GCCGGATCGAAATCATCTGG+TGG | 0.568519 | 6:-108667601 | None:intergenic |
| AGTGGCGATGCTGGAAATGA+GGG | 0.574162 | 6:+108667642 | MsG0680035577.01.T01:CDS |
| CCCACCAGATGATTTCGATC+CGG | 0.583849 | 6:+108667600 | MsG0680035577.01.T01:CDS |
| CAGTATCTTGAGTCTACTAG+AGG | 0.595830 | 6:+108667787 | MsG0680035577.01.T01:CDS |
| CTACTAGAGGGATTGGTTGG+GGG | 0.604522 | 6:+108667800 | MsG0680035577.01.T01:CDS |
| CCGGATCGAAATCATCTGGT+GGG | 0.615720 | 6:-108667600 | None:intergenic |
| AACACAAACCATGAAGAGAA+GGG | 0.648401 | 6:-108667837 | None:intergenic |
| AGTATCTTGAGTCTACTAGA+GGG | 0.663002 | 6:+108667788 | MsG0680035577.01.T01:CDS |
| GAACCCATACAAAGATCCAG+TGG | 0.708004 | 6:+108667624 | MsG0680035577.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTCTTTTTGATATATAAT+TGG | + | Chr6:108667873-108667892 | MsG0680035577.01.T01:intron | 15.0% |
| !! | TTGTTGTGAAATTATGAAAT+GGG | + | Chr6:108667899-108667918 | MsG0680035577.01.T01:intron | 20.0% |
| !!! | GATTTTTATATAGCATTGAA+GGG | + | Chr6:108667947-108667966 | MsG0680035577.01.T01:intron | 20.0% |
| !!! | TGATTTTTATATAGCATTGA+AGG | + | Chr6:108667946-108667965 | MsG0680035577.01.T01:intron | 20.0% |
| !!! | TTGATGTTTTTGTTGATTAA+GGG | + | Chr6:108668057-108668076 | MsG0680035577.01.T01:intron | 20.0% |
| !!! | TTTGATGTTTTTGTTGATTA+AGG | + | Chr6:108668056-108668075 | MsG0680035577.01.T01:intron | 20.0% |
| !!! | TTTGTTGTGAAATTATGAAA+TGG | + | Chr6:108667898-108667917 | MsG0680035577.01.T01:intron | 20.0% |
| !!! | TTGTATAATGGGTTTTTGTT+GGG | + | Chr6:108667971-108667990 | MsG0680035577.01.T01:intron | 25.0% |
| !!! | TTTGTATAATGGGTTTTTGT+TGG | + | Chr6:108667970-108667989 | MsG0680035577.01.T01:intron | 25.0% |
| AACACATTGTTCGTGAAAAA+TGG | + | Chr6:108667665-108667684 | MsG0680035577.01.T01:CDS | 30.0% | |
| CATTGAAGGGTTTGTATAAT+GGG | + | Chr6:108667960-108667979 | MsG0680035577.01.T01:intron | 30.0% | |
| TTTGTTGGGAATAGTGAAAT+GGG | + | Chr6:108667985-108668004 | MsG0680035577.01.T01:intron | 30.0% | |
| ! | TGATTTTTATGTCGTATGGA+AGG | + | Chr6:108668032-108668051 | MsG0680035577.01.T01:intron | 30.0% |
| ! | TTGTTGATTAAGGGTATGTT+TGG | + | Chr6:108668066-108668085 | MsG0680035577.01.T01:intron | 30.0% |
| ! | TTTTGTTGGGAATAGTGAAA+TGG | + | Chr6:108667984-108668003 | MsG0680035577.01.T01:intron | 30.0% |
| AAACACAAACCATGAAGAGA+AGG | - | Chr6:108667841-108667860 | None:intergenic | 35.0% | |
| AACACAAACCATGAAGAGAA+GGG | - | Chr6:108667840-108667859 | None:intergenic | 35.0% | |
| AGTATCTTGAGTCTACTAGA+GGG | + | Chr6:108667788-108667807 | MsG0680035577.01.T01:CDS | 35.0% | |
| ATCTCCGAAAGAGTGAAAAA+TGG | + | Chr6:108667543-108667562 | MsG0680035577.01.T01:exon | 35.0% | |
| GCATTGAAGGGTTTGTATAA+TGG | + | Chr6:108667959-108667978 | MsG0680035577.01.T01:intron | 35.0% | |
| TCTCCGAAAGAGTGAAAAAT+GGG | + | Chr6:108667544-108667563 | MsG0680035577.01.T01:exon | 35.0% | |
| TGAAAAATGGGAAGGAAGAA+GGG | + | Chr6:108667556-108667575 | MsG0680035577.01.T01:exon | 35.0% | |
| TTATTCGTGAAAAGCTTCGT+TGG | + | Chr6:108667710-108667729 | MsG0680035577.01.T01:CDS | 35.0% | |
| ! | GCTGTGATTTTTATGTCGTA+TGG | + | Chr6:108668028-108668047 | MsG0680035577.01.T01:intron | 35.0% |
| !! | AAAAGCTTCGTTGGTGTTAT+AGG | + | Chr6:108667719-108667738 | MsG0680035577.01.T01:CDS | 35.0% |
| !! | CTTCCCATTTTTCACTCTTT+CGG | - | Chr6:108667550-108667569 | None:intergenic | 35.0% |
| !! | GTTGGTGTTATAGGATTGAA+GGG | + | Chr6:108667728-108667747 | MsG0680035577.01.T01:CDS | 35.0% |
| CAGTATCTTGAGTCTACTAG+AGG | + | Chr6:108667787-108667806 | MsG0680035577.01.T01:CDS | 40.0% | |
| CGAAAGAGTGAAAAATGGGA+AGG | + | Chr6:108667548-108667567 | MsG0680035577.01.T01:exon | 40.0% | |
| GAAAAATGGGAAGGAAGAAG+GGG | + | Chr6:108667557-108667576 | MsG0680035577.01.T01:exon | 40.0% | |
| GTGAAAAATGGGAAGGAAGA+AGG | + | Chr6:108667555-108667574 | MsG0680035577.01.T01:exon | 40.0% | |
| !! | CGTTGGTGTTATAGGATTGA+AGG | + | Chr6:108667727-108667746 | MsG0680035577.01.T01:CDS | 40.0% |
| ATCGCCACTGGATCTTTGTA+TGG | - | Chr6:108667631-108667650 | None:intergenic | 45.0% | |
| CTTGAGTCTACTAGAGGGAT+TGG | + | Chr6:108667793-108667812 | MsG0680035577.01.T01:CDS | 45.0% | |
| GAACCCATACAAAGATCCAG+TGG | + | Chr6:108667624-108667643 | MsG0680035577.01.T01:CDS | 45.0% | |
| TCGCCACTGGATCTTTGTAT+GGG | - | Chr6:108667630-108667649 | None:intergenic | 45.0% | |
| ! | AGTCTACTAGAGGGATTGGT+TGG | + | Chr6:108667797-108667816 | MsG0680035577.01.T01:CDS | 45.0% |
| !! | GTCTACTAGAGGGATTGGTT+GGG | + | Chr6:108667798-108667817 | MsG0680035577.01.T01:CDS | 45.0% |
| !! | TCTACTAGAGGGATTGGTTG+GGG | + | Chr6:108667799-108667818 | MsG0680035577.01.T01:CDS | 45.0% |
| AGTGGCGATGCTGGAAATGA+GGG | + | Chr6:108667642-108667661 | MsG0680035577.01.T01:CDS | 50.0% | |
| CCCACCAGATGATTTCGATC+CGG | + | Chr6:108667600-108667619 | MsG0680035577.01.T01:CDS | 50.0% | |
| CCGGATCGAAATCATCTGGT+GGG | - | Chr6:108667603-108667622 | None:intergenic | 50.0% | |
| GGATCTTTGTATGGGTTCGC+CGG | - | Chr6:108667622-108667641 | None:intergenic | 50.0% | |
| TTCGCCGGATCGAAATCATC+TGG | - | Chr6:108667607-108667626 | None:intergenic | 50.0% | |
| !! | CTACTAGAGGGATTGGTTGG+GGG | + | Chr6:108667800-108667819 | MsG0680035577.01.T01:CDS | 50.0% |
| CAAAGATCCAGTGGCGATGC+TGG | + | Chr6:108667633-108667652 | MsG0680035577.01.T01:CDS | 55.0% | |
| CAGTGGCGATGCTGGAAATG+AGG | + | Chr6:108667641-108667660 | MsG0680035577.01.T01:CDS | 55.0% | |
| CTCATTTCCAGCATCGCCAC+TGG | - | Chr6:108667643-108667662 | None:intergenic | 55.0% | |
| GCCGGATCGAAATCATCTGG+TGG | - | Chr6:108667604-108667623 | None:intergenic | 55.0% | |
| GGTCGTCACCCTTCTCTTCA+TGG | + | Chr6:108667829-108667848 | MsG0680035577.01.T01:CDS | 55.0% | |
| ! | GGGAAGGAAGAAGGGGTATG+TGG | + | Chr6:108667564-108667583 | MsG0680035577.01.T01:CDS | 55.0% |
| !! | GGGATTGGTTGGGGGAAAGA+TGG | + | Chr6:108667808-108667827 | MsG0680035577.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 108667530 | 108668112 | 108667530 | ID=MsG0680035577.01;Name=MsG0680035577.01 |
| Chr6 | mRNA | 108667530 | 108668112 | 108667530 | ID=MsG0680035577.01.T01;Parent=MsG0680035577.01;Name=MsG0680035577.01.T01;_AED=0.47;_eAED=0.52;_QI=32|0|0.5|1|1|1|2|0|107 |
| Chr6 | exon | 108667530 | 108667850 | 108667530 | ID=MsG0680035577.01.T01:exon:8221;Parent=MsG0680035577.01.T01 |
| Chr6 | exon | 108668078 | 108668112 | 108668078 | ID=MsG0680035577.01.T01:exon:8222;Parent=MsG0680035577.01.T01 |
| Chr6 | five_prime_UTR | 108667530 | 108667561 | 108667530 | ID=MsG0680035577.01.T01:five_prime_utr;Parent=MsG0680035577.01.T01 |
| Chr6 | CDS | 108667562 | 108667850 | 108667562 | ID=MsG0680035577.01.T01:cds;Parent=MsG0680035577.01.T01 |
| Chr6 | CDS | 108668078 | 108668112 | 108668078 | ID=MsG0680035577.01.T01:cds;Parent=MsG0680035577.01.T01 |
| Gene Sequence |
| Protein sequence |
