Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012222.01.T01 | XP_003598648.1 | 85.804 | 317 | 12 | 2 | 1 | 287 | 1 | 314 | 0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012222.01.T01 | P51074 | 58.675 | 317 | 98 | 2 | 1 | 287 | 1 | 314 | 1.12E-126 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012222.01.T01 | B7FJY0 | 85.804 | 317 | 12 | 2 | 1 | 287 | 1 | 314 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000028.01 | MsG0380012222.01 | 0.829530 | 4.890144e-55 | 5.018165e-52 |
| MsG0180000029.01 | MsG0380012222.01 | 0.801633 | 8.213967e-49 | 3.941928e-46 |
| MsG0180000040.01 | MsG0380012222.01 | -0.803399 | 3.551705e-49 | 1.783069e-46 |
| MsG0180000367.01 | MsG0380012222.01 | 0.806752 | 7.060747e-50 | 3.863317e-47 |
| MsG0180001029.01 | MsG0380012222.01 | 0.855420 | 6.384940e-62 | 1.473337e-58 |
| MsG0180001084.01 | MsG0380012222.01 | 0.815243 | 1.021299e-51 | 7.003397e-49 |
| MsG0180001548.01 | MsG0380012222.01 | -0.807299 | 5.410434e-50 | 3.002689e-47 |
| MsG0180002238.01 | MsG0380012222.01 | 0.828949 | 6.763485e-55 | 6.823026e-52 |
| MsG0180003320.01 | MsG0380012222.01 | 0.845130 | 4.919565e-59 | 8.116901e-56 |
| MsG0180003322.01 | MsG0380012222.01 | 0.802535 | 5.357390e-49 | 2.630802e-46 |
| MsG0180003484.01 | MsG0380012222.01 | 0.840185 | 1.012229e-57 | 1.430668e-54 |
| MsG0180004792.01 | MsG0380012222.01 | -0.812491 | 4.127971e-51 | 2.628407e-48 |
| MsG0180004830.01 | MsG0380012222.01 | 0.816198 | 6.258310e-52 | 4.405645e-49 |
| MsG0180005059.01 | MsG0380012222.01 | 0.801392 | 9.201319e-49 | 4.389029e-46 |
| MsG0180005130.01 | MsG0380012222.01 | 0.812061 | 5.124157e-51 | 3.224828e-48 |
| MsG0180005143.01 | MsG0380012222.01 | 0.816238 | 6.129316e-52 | 4.319548e-49 |
| MsG0180005267.01 | MsG0380012222.01 | 0.814562 | 1.446359e-51 | 9.737792e-49 |
| MsG0180005741.01 | MsG0380012222.01 | 0.806741 | 7.098798e-50 | 3.883086e-47 |
| MsG0180005898.01 | MsG0380012222.01 | -0.823181 | 1.590109e-53 | 1.359258e-50 |
| MsG0180005906.01 | MsG0380012222.01 | 0.804744 | 1.865065e-49 | 9.693302e-47 |
| MsG0180006010.01 | MsG0380012222.01 | 0.817319 | 3.506813e-52 | 2.545475e-49 |
| MsG0180006183.01 | MsG0380012222.01 | 0.814712 | 1.340011e-51 | 9.058021e-49 |
| MsG0180006253.01 | MsG0380012222.01 | 0.828333 | 9.532416e-55 | 9.445398e-52 |
| MsG0280006316.01 | MsG0380012222.01 | 0.806956 | 6.393432e-50 | 3.516692e-47 |
| MsG0280010617.01 | MsG0380012222.01 | 0.813354 | 2.670222e-51 | 1.739850e-48 |
| MsG0280011218.01 | MsG0380012222.01 | -0.806660 | 7.386460e-50 | 4.031721e-47 |
| MsG0280011269.01 | MsG0380012222.01 | 0.825243 | 5.212521e-54 | 4.725015e-51 |
| MsG0280011271.01 | MsG0380012222.01 | 0.818791 | 1.629974e-52 | 1.232039e-49 |
| MsG0380012222.01 | MsG0380015456.01 | -0.806380 | 8.459666e-50 | 4.584859e-47 |
| MsG0380012222.01 | MsG0380015644.01 | 0.800074 | 1.709429e-48 | 7.886296e-46 |
| MsG0380012222.01 | MsG0380016250.01 | 0.833363 | 5.566704e-56 | 6.396661e-53 |
| MsG0380012222.01 | MsG0380016490.01 | 0.835665 | 1.469854e-56 | 1.809640e-53 |
| MsG0380012222.01 | MsG0380017168.01 | 0.811162 | 8.037425e-51 | 4.938975e-48 |
| MsG0380012222.01 | MsG0380017694.01 | 0.818145 | 2.283309e-52 | 1.695369e-49 |
| MsG0380012222.01 | MsG0380017901.01 | 0.821730 | 3.455858e-53 | 2.834717e-50 |
| MsG0380012222.01 | MsG0480018362.01 | 0.815256 | 1.014654e-51 | 6.960341e-49 |
| MsG0380012222.01 | MsG0480018559.01 | 0.813744 | 2.191957e-51 | 1.443337e-48 |
| MsG0380012222.01 | MsG0480018617.01 | 0.812417 | 4.284606e-51 | 2.722852e-48 |
| MsG0380012222.01 | MsG0480019171.01 | 0.809442 | 1.888541e-50 | 1.108934e-47 |
| MsG0380012222.01 | MsG0480019322.01 | 0.807590 | 4.692424e-50 | 2.623785e-47 |
| MsG0380012222.01 | MsG0480019573.01 | -0.807607 | 4.654995e-50 | 2.604033e-47 |
| MsG0380012222.01 | MsG0480019817.01 | 0.849510 | 3.087645e-60 | 5.866623e-57 |
| MsG0380012222.01 | MsG0480019818.01 | 0.814230 | 1.712926e-51 | 1.142868e-48 |
| MsG0380012222.01 | MsG0480020797.01 | 0.818865 | 1.568282e-52 | 1.187892e-49 |
| MsG0380012222.01 | MsG0480021091.01 | 0.811872 | 5.633855e-51 | 3.527558e-48 |
| MsG0380012222.01 | MsG0480021230.01 | 0.818617 | 1.784822e-52 | 1.342568e-49 |
| MsG0380012222.01 | MsG0480021231.01 | 0.802036 | 6.787961e-49 | 3.291154e-46 |
| MsG0380012222.01 | MsG0480021234.01 | 0.805831 | 1.103734e-49 | 5.898796e-47 |
| MsG0380012222.01 | MsG0480021436.01 | 0.818266 | 2.143699e-52 | 1.596992e-49 |
| MsG0380012222.01 | MsG0480021967.01 | -0.815920 | 7.217620e-52 | 5.042211e-49 |
| MsG0380012222.01 | MsG0480023429.01 | 0.803368 | 3.603934e-49 | 1.807730e-46 |
| MsG0380012222.01 | MsG0480023466.01 | -0.824840 | 6.489511e-54 | 5.815399e-51 |
| MsG0380012222.01 | MsG0580025007.01 | 0.821801 | 3.328096e-53 | 2.735516e-50 |
| MsG0380012222.01 | MsG0580025024.01 | 0.815155 | 1.068713e-51 | 7.310946e-49 |
| MsG0380012222.01 | MsG0580025633.01 | 0.831443 | 1.664890e-55 | 1.806974e-52 |
| MsG0380012222.01 | MsG0580026521.01 | 0.826687 | 2.365861e-54 | 2.234534e-51 |
| MsG0380012222.01 | MsG0580027751.01 | 0.806424 | 8.280878e-50 | 4.493047e-47 |
| MsG0380012222.01 | MsG0580030141.01 | 0.803716 | 3.052069e-49 | 1.544706e-46 |
| MsG0380012222.01 | MsG0680031200.01 | 0.833936 | 4.004237e-56 | 4.681317e-53 |
| MsG0380012222.01 | MsG0680032026.01 | 0.818544 | 1.855105e-52 | 1.392699e-49 |
| MsG0380012222.01 | MsG0680032932.01 | 0.820148 | 7.992594e-53 | 6.274007e-50 |
| MsG0380012222.01 | MsG0680034238.01 | 0.834327 | 3.196139e-56 | 3.780690e-53 |
| MsG0380012222.01 | MsG0780035930.01 | 0.820527 | 6.544216e-53 | 5.190663e-50 |
| MsG0380012222.01 | MsG0780035932.01 | 0.816200 | 6.250008e-52 | 4.400151e-49 |
| MsG0380012222.01 | MsG0780036008.01 | -0.817456 | 3.267218e-52 | 2.380632e-49 |
| MsG0380012222.01 | MsG0780036258.01 | 0.803936 | 2.747114e-49 | 1.398395e-46 |
| MsG0380012222.01 | MsG0780037052.01 | 0.800766 | 1.235792e-48 | 5.802041e-46 |
| MsG0380012222.01 | MsG0780038318.01 | 0.826667 | 2.392885e-54 | 2.258781e-51 |
| MsG0380012222.01 | MsG0780038657.01 | 0.808053 | 3.741087e-50 | 2.117449e-47 |
| MsG0380012222.01 | MsG0780038919.01 | 0.825894 | 3.655328e-54 | 3.375431e-51 |
| MsG0380012222.01 | MsG0780039912.01 | 0.820917 | 5.322967e-53 | 4.268346e-50 |
| MsG0380012222.01 | MsG0780040560.01 | 0.807256 | 5.523719e-50 | 3.062125e-47 |
| MsG0380012222.01 | MsG0780040670.01 | 0.818243 | 2.169575e-52 | 1.615206e-49 |
| MsG0380012222.01 | MsG0780040684.01 | -0.822950 | 1.800057e-53 | 1.528736e-50 |
| MsG0380012222.01 | MsG0780040716.01 | 0.853163 | 2.864846e-61 | 6.132457e-58 |
| MsG0380012222.01 | MsG0780040719.01 | 0.801638 | 8.192261e-49 | 3.932050e-46 |
| MsG0380012222.01 | MsG0780040847.01 | 0.800615 | 1.326385e-48 | 6.203766e-46 |
| MsG0380012222.01 | MsG0780040965.01 | -0.807344 | 5.292976e-50 | 2.940880e-47 |
| MsG0380012222.01 | MsG0780041331.01 | -0.812167 | 4.858717e-51 | 3.066731e-48 |
| MsG0380012222.01 | MsG0780041385.01 | -0.804564 | 2.033535e-49 | 1.051889e-46 |
| MsG0380012222.01 | MsG0780041447.01 | 0.811983 | 5.328325e-51 | 3.346305e-48 |
| MsG0380012222.01 | MsG0780041823.01 | 0.855113 | 7.845005e-62 | 1.791461e-58 |
| MsG0380012222.01 | MsG0880042415.01 | -0.812847 | 3.449455e-51 | 2.216884e-48 |
| MsG0380012222.01 | MsG0880042641.01 | 0.804170 | 2.456033e-49 | 1.257648e-46 |
| MsG0380012222.01 | MsG0880043056.01 | -0.801086 | 1.062982e-48 | 5.031798e-46 |
| MsG0380012222.01 | MsG0880043495.01 | 0.803168 | 3.965820e-49 | 1.979152e-46 |
| MsG0380012222.01 | MsG0880043688.01 | 0.810262 | 1.258093e-50 | 7.548461e-48 |
| MsG0380012222.01 | MsG0880044712.01 | 0.833696 | 4.598025e-56 | 5.335769e-53 |
| MsG0380012222.01 | MsG0880044834.01 | -0.850990 | 1.187838e-60 | 2.369366e-57 |
| MsG0380012222.01 | MsG0880045801.01 | 0.822840 | 1.910048e-53 | 1.617137e-50 |
| MsG0380012222.01 | MsG0880046324.01 | -0.805772 | 1.135873e-49 | 6.061447e-47 |
| MsG0380012222.01 | MsG0880046403.01 | 0.806991 | 6.285005e-50 | 3.460171e-47 |
| MsG0380012222.01 | MsG0880046870.01 | 0.848364 | 6.423453e-60 | 1.176000e-56 |
| MsG0380012222.01 | MsG0880046946.01 | 0.802035 | 6.791935e-49 | 3.292982e-46 |
| MsG0380012222.01 | MsG0880047057.01 | 0.806410 | 8.337582e-50 | 4.522165e-47 |
| MsG0380012222.01 | MsG0880047312.01 | 0.807207 | 5.656993e-50 | 3.132046e-47 |
| MsG0380012222.01 | MsG0880047450.01 | 0.847131 | 1.403865e-59 | 2.471139e-56 |
| MsG0380012222.01 | MsG0880047704.01 | 0.801172 | 1.020551e-48 | 4.841249e-46 |
| MsG0280006579.01 | MsG0380012222.01 | 0.807631 | 4.600509e-50 | 2.575274e-47 |
| MsG0280006851.01 | MsG0380012222.01 | 0.815356 | 9.641426e-52 | 6.632357e-49 |
| MsG0280007201.01 | MsG0380012222.01 | 0.805110 | 1.563338e-49 | 8.201563e-47 |
| MsG0280007689.01 | MsG0380012222.01 | 0.841760 | 3.908405e-58 | 5.800640e-55 |
| MsG0280007874.01 | MsG0380012222.01 | 0.811073 | 8.401203e-51 | 5.150625e-48 |
| MsG0280008226.01 | MsG0380012222.01 | 0.801195 | 1.009824e-48 | 4.793029e-46 |
| MsG0280009445.01 | MsG0380012222.01 | -0.814767 | 1.303003e-51 | 8.820406e-49 |
| MsG0280009526.01 | MsG0380012222.01 | 0.816167 | 6.358985e-52 | 4.472608e-49 |
| MsG0280010425.01 | MsG0380012222.01 | 0.814399 | 1.571699e-51 | 1.053528e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012222.01.T01 | MTR_3g018780 | 85.804 | 317 | 12 | 2 | 1 | 287 | 1 | 314 | 0.0 | 528 |
| MsG0380012222.01.T01 | MTR_8g038220 | 68.139 | 317 | 67 | 3 | 1 | 287 | 1 | 313 | 2.68e-155 | 436 |
| MsG0380012222.01.T01 | MTR_8g038220 | 67.823 | 317 | 69 | 2 | 1 | 287 | 1 | 314 | 8.95e-155 | 434 |
| MsG0380012222.01.T01 | MTR_8g038180 | 63.492 | 315 | 82 | 2 | 1 | 285 | 1 | 312 | 1.40e-137 | 391 |
| MsG0380012222.01.T01 | MTR_8g038210 | 63.407 | 317 | 82 | 3 | 1 | 287 | 1 | 313 | 1.77e-137 | 390 |
| MsG0380012222.01.T01 | MTR_8g038210 | 63.722 | 317 | 81 | 3 | 1 | 287 | 1 | 313 | 1.83e-137 | 390 |
| MsG0380012222.01.T01 | MTR_3g018790 | 59.937 | 317 | 94 | 2 | 1 | 287 | 1 | 314 | 8.48e-133 | 379 |
| MsG0380012222.01.T01 | MTR_3g018790 | 56.327 | 245 | 74 | 2 | 73 | 287 | 19 | 260 | 1.78e-92 | 275 |
| MsG0380012222.01.T01 | MTR_2g031980 | 42.038 | 314 | 149 | 2 | 1 | 284 | 1 | 311 | 1.56e-88 | 266 |
| MsG0380012222.01.T01 | MTR_5g063670 | 44.025 | 318 | 144 | 3 | 1 | 287 | 1 | 315 | 1.39e-83 | 254 |
| MsG0380012222.01.T01 | MTR_0276s0050 | 44.304 | 316 | 142 | 4 | 1 | 285 | 1 | 313 | 5.14e-83 | 252 |
| MsG0380012222.01.T01 | MTR_3g018920 | 55.450 | 211 | 59 | 2 | 1 | 211 | 1 | 176 | 4.47e-73 | 222 |
| MsG0380012222.01.T01 | MTR_8g038150 | 36.688 | 308 | 159 | 3 | 11 | 285 | 12 | 316 | 2.56e-59 | 192 |
| MsG0380012222.01.T01 | MTR_8g107640 | 34.810 | 316 | 170 | 5 | 1 | 284 | 1 | 312 | 2.01e-55 | 182 |
| MsG0380012222.01.T01 | MTR_6g071605 | 33.856 | 319 | 175 | 5 | 1 | 287 | 1 | 315 | 1.52e-52 | 174 |
| MsG0380012222.01.T01 | MTR_6g071615 | 35.110 | 319 | 171 | 5 | 1 | 287 | 1 | 315 | 4.08e-51 | 171 |
| MsG0380012222.01.T01 | MTR_1g033560 | 31.746 | 315 | 181 | 4 | 1 | 284 | 1 | 312 | 1.02e-48 | 164 |
| MsG0380012222.01.T01 | MTR_1g112520 | 33.019 | 318 | 177 | 5 | 1 | 286 | 1 | 314 | 5.41e-47 | 160 |
| MsG0380012222.01.T01 | MTR_6g071595 | 32.343 | 303 | 170 | 4 | 15 | 286 | 16 | 314 | 4.17e-44 | 152 |
| MsG0380012222.01.T01 | MTR_8g038170 | 34.295 | 312 | 161 | 6 | 14 | 285 | 5 | 312 | 5.15e-44 | 152 |
| MsG0380012222.01.T01 | MTR_8g038170 | 34.295 | 312 | 161 | 6 | 14 | 285 | 5 | 312 | 5.15e-44 | 152 |
| MsG0380012222.01.T01 | MTR_6g071595 | 29.200 | 250 | 164 | 5 | 15 | 263 | 16 | 253 | 4.00e-32 | 120 |
| MsG0380012222.01.T01 | MTR_3g018925 | 65.789 | 76 | 26 | 0 | 212 | 287 | 34 | 109 | 3.74e-27 | 102 |
| MsG0380012222.01.T01 | MTR_6g028030 | 23.103 | 290 | 184 | 5 | 33 | 285 | 23 | 310 | 8.86e-18 | 82.0 |
| MsG0380012222.01.T01 | MTR_8g038090 | 52.174 | 69 | 28 | 2 | 220 | 285 | 25 | 91 | 1.37e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012222.01.T01 | AT5G12380 | 48.408 | 314 | 129 | 2 | 1 | 284 | 1 | 311 | 8.79e-101 | 298 |
| MsG0380012222.01.T01 | AT1G35720 | 47.022 | 319 | 134 | 3 | 1 | 287 | 1 | 316 | 7.03e-94 | 280 |
| MsG0380012222.01.T01 | AT5G10230 | 45.597 | 318 | 138 | 4 | 1 | 287 | 1 | 314 | 4.26e-86 | 260 |
| MsG0380012222.01.T01 | AT5G65020 | 45.141 | 319 | 140 | 3 | 1 | 287 | 1 | 316 | 1.38e-85 | 259 |
| MsG0380012222.01.T01 | AT5G10220 | 43.750 | 320 | 143 | 5 | 1 | 287 | 1 | 316 | 5.60e-82 | 250 |
| MsG0380012222.01.T01 | AT5G65020 | 45.238 | 294 | 127 | 2 | 25 | 287 | 11 | 301 | 4.57e-80 | 244 |
| MsG0380012222.01.T01 | AT2G38760 | 36.449 | 321 | 164 | 4 | 1 | 284 | 1 | 318 | 2.26e-64 | 205 |
| MsG0380012222.01.T01 | AT1G68090 | 34.277 | 318 | 174 | 4 | 1 | 286 | 1 | 315 | 1.96e-52 | 174 |
| MsG0380012222.01.T01 | AT1G68090 | 36.283 | 226 | 139 | 3 | 1 | 224 | 1 | 223 | 1.32e-40 | 141 |
| MsG0380012222.01.T01 | AT2G38750 | 31.148 | 305 | 164 | 7 | 25 | 287 | 2 | 302 | 2.07e-37 | 134 |
| MsG0380012222.01.T01 | AT2G38750 | 31.148 | 305 | 164 | 7 | 25 | 287 | 19 | 319 | 2.69e-37 | 135 |
Find 66 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGCCATTATCGCAATTT+TGG | 0.073058 | 3:+12923030 | MsG0380012222.01.T01:CDS |
| CGCAATGCGATCAAGAAATT+TGG | 0.104840 | 3:+12924738 | MsG0380012222.01.T01:CDS |
| GCCTCAGTTTGTGCCAATTT+TGG | 0.143057 | 3:-12923906 | None:intergenic |
| GAAGTTCATCCTCACTCTTT+TGG | 0.245293 | 3:+12924899 | MsG0380012222.01.T01:CDS |
| ATGACCCAAAATTGCGATAA+TGG | 0.322359 | 3:-12923035 | None:intergenic |
| AGCAGACACATCTTCTTCTA+TGG | 0.328095 | 3:-12923581 | None:intergenic |
| AGATGAGATCAATCCAAAAT+TGG | 0.364053 | 3:+12923893 | MsG0380012222.01.T01:CDS |
| GGTGAGCTCATTTAGGTATG+AGG | 0.370400 | 3:+12923869 | MsG0380012222.01.T01:intron |
| ACGTTTGTAGCGGTTATGAT+AGG | 0.400853 | 3:-12923557 | None:intergenic |
| GTAGTCCCCTGAGGTTTCCT+TGG | 0.401072 | 3:-12924874 | None:intergenic |
| GCAACAATGAAGAAGTCATT+AGG | 0.413585 | 3:+12923964 | MsG0380012222.01.T01:CDS |
| CATCTTGAACAGGAGATGTT+TGG | 0.417110 | 3:-12921555 | None:intergenic |
| ACAGATTAGAAAAGCTTATG+AGG | 0.422078 | 3:+12923078 | MsG0380012222.01.T01:CDS |
| GATTGTCACAAGGGCTGAAA+AGG | 0.459654 | 3:+12924788 | MsG0380012222.01.T01:CDS |
| AGAGCCTCAGCATCTTGAAC+AGG | 0.477894 | 3:-12921565 | None:intergenic |
| AGAAATCTCTGGTGACTTTG+AGG | 0.496880 | 3:+12923138 | MsG0380012222.01.T01:CDS |
| GCAGTCTCCAAGGAAACCTC+AGG | 0.496953 | 3:+12924867 | MsG0380012222.01.T01:CDS |
| GCTATCAACTGAAGAGCTCT+TGG | 0.504256 | 3:+12923522 | MsG0380012222.01.T01:CDS |
| CGTCTCGAGTCAGAAATCTC+TGG | 0.515167 | 3:+12923127 | MsG0380012222.01.T01:CDS |
| AAAACAGCATCACGGTCTGC+AGG | 0.524079 | 3:-12923436 | None:intergenic |
| CACCACCGGTCATCTTCGCC+AGG | 0.524516 | 3:+12923606 | MsG0380012222.01.T01:CDS |
| TGAACAACAATGGTGGCCAT+TGG | 0.524982 | 3:-12921529 | None:intergenic |
| GAAAGTGTCAAGGAAAAGAA+AGG | 0.529912 | 3:+12923942 | MsG0380012222.01.T01:CDS |
| AAATTTGGAACCGATGAAGA+TGG | 0.530403 | 3:+12924753 | MsG0380012222.01.T01:CDS |
| TGCCATGTTCATCTCGATAA+CGG | 0.533113 | 3:-12924031 | None:intergenic |
| ACATGGCATCTCCATTAGTA+AGG | 0.533720 | 3:+12924046 | MsG0380012222.01.T01:CDS |
| GTGAGCTCATTTAGGTATGA+GGG | 0.545690 | 3:+12923870 | MsG0380012222.01.T01:intron |
| ACTTGCCTGGCGAAGATGAC+CGG | 0.547219 | 3:-12923611 | None:intergenic |
| TCCAAAATTGGCACAAACTG+AGG | 0.551400 | 3:+12923905 | MsG0380012222.01.T01:CDS |
| TTATACAGAGGGCTGTGTAC+CGG | 0.553484 | 3:+12923401 | MsG0380012222.01.T01:intron |
| GCTCTCCGACTTGCTTTCAA+AGG | 0.560633 | 3:+12921583 | MsG0380012222.01.T01:CDS |
| AAGGGCTGAAAAGGATCTGA+AGG | 0.565968 | 3:+12924797 | MsG0380012222.01.T01:CDS |
| ATCTCCTGTTCAAGATGCTG+AGG | 0.576916 | 3:+12921561 | MsG0380012222.01.T01:CDS |
| AAGTTGAGTCTTGCTCCTTG+TGG | 0.582635 | 3:-12923994 | None:intergenic |
| TCTTGAAGATGCAGTCTCCA+AGG | 0.582711 | 3:+12924857 | MsG0380012222.01.T01:CDS |
| AGGATGGGGTGCTGATAACA+AGG | 0.586318 | 3:+12923012 | MsG0380012222.01.T01:intron |
| ATCAATGTAGCAATCAGGAA+TGG | 0.588048 | 3:+12923460 | MsG0380012222.01.T01:CDS |
| GGCTGTGTACCGGTGGATGT+TGG | 0.594758 | 3:+12923411 | MsG0380012222.01.T01:CDS |
| GAACTTCTTGTAGTCCCCTG+AGG | 0.600520 | 3:-12924883 | None:intergenic |
| GATGTGTCTGCTCACACCAC+CGG | 0.601797 | 3:+12923592 | MsG0380012222.01.T01:CDS |
| CAGATTAGAAAAGCTTATGA+GGG | 0.602704 | 3:+12923079 | MsG0380012222.01.T01:CDS |
| GCGGCTCAGTCCATCTTCAT+CGG | 0.605259 | 3:-12924763 | None:intergenic |
| CTTCTATGGAACGTTTGTAG+CGG | 0.605599 | 3:-12923567 | None:intergenic |
| AACCGTTATCGAGATGAACA+TGG | 0.608246 | 3:+12924029 | MsG0380012222.01.T01:CDS |
| CTGAAGAGCTCTTGGCAGTG+AGG | 0.609550 | 3:+12923530 | MsG0380012222.01.T01:CDS |
| TACAGAGGGCTGTGTACCGG+TGG | 0.610055 | 3:+12923404 | MsG0380012222.01.T01:intron |
| CTGCAGGTTCCAACATCCAC+CGG | 0.614647 | 3:-12923420 | None:intergenic |
| ACAATAAAGAATGACTTGCC+TGG | 0.617488 | 3:-12923624 | None:intergenic |
| CAGCCCTTGTGACAATCACG+CGG | 0.622641 | 3:-12924782 | None:intergenic |
| GTCATAGAAATGTTCATCAG+AGG | 0.629014 | 3:+12923053 | MsG0380012222.01.T01:CDS |
| TATTATTCATGAAAGTGTCA+AGG | 0.631217 | 3:+12923932 | MsG0380012222.01.T01:CDS |
| CAGTCTCCAAGGAAACCTCA+GGG | 0.644391 | 3:+12924868 | MsG0380012222.01.T01:CDS |
| CATGTTTCCCCAAAAGAGTG+AGG | 0.645029 | 3:-12924908 | None:intergenic |
| AAGGAGCAAGACTCAACTTG+TGG | 0.646109 | 3:+12923998 | MsG0380012222.01.T01:CDS |
| TCATTAGGATTCTTACCACA+AGG | 0.647125 | 3:+12923979 | MsG0380012222.01.T01:CDS |
| AGATTAGAAAAGCTTATGAG+GGG | 0.656382 | 3:+12923080 | MsG0380012222.01.T01:CDS |
| ATTCACCTTTGAAAGCAAGT+CGG | 0.657051 | 3:-12921588 | None:intergenic |
| TGAGCCGCGTGATTGTCACA+AGG | 0.658507 | 3:+12924778 | MsG0380012222.01.T01:CDS |
| TGCCTGGCGAAGATGACCGG+TGG | 0.667284 | 3:-12923608 | None:intergenic |
| TGTCACAAATGATGTTTATG+CGG | 0.668982 | 3:+12923644 | MsG0380012222.01.T01:CDS |
| GAGCCGCGTGATTGTCACAA+GGG | 0.689120 | 3:+12924779 | MsG0380012222.01.T01:CDS |
| CATTGATCAAAACAGCATCA+CGG | 0.696529 | 3:-12923444 | None:intergenic |
| TGGCAACAAAGACTATCATG+TGG | 0.723538 | 3:+12923480 | MsG0380012222.01.T01:CDS |
| AGTCTCCAAGGAAACCTCAG+GGG | 0.750846 | 3:+12924869 | MsG0380012222.01.T01:CDS |
| TTGGCTATGAACAACAATGG+TGG | 0.770123 | 3:-12921536 | None:intergenic |
| TGTTTGGCTATGAACAACAA+TGG | 0.778872 | 3:-12921539 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAACTTGTAAAA+GGG | - | Chr3:12922227-12922246 | None:intergenic | 10.0% |
| !! | TAAAAAATTAAACTTGTAAA+AGG | - | Chr3:12922228-12922247 | None:intergenic | 10.0% |
| !! | ATTGATTAATCATAATAATG+TGG | + | Chr3:12921672-12921691 | MsG0380012222.01.T01:intron | 15.0% |
| !!! | ATAACATACACTTTTTTTTA+AGG | + | Chr3:12922010-12922029 | MsG0380012222.01.T01:intron | 15.0% |
| !!! | ATGAAACCATTTTTTTAATT+TGG | + | Chr3:12924166-12924185 | MsG0380012222.01.T01:intron | 15.0% |
| !!! | CTTTTTTTTTTTCGAAAATA+AGG | - | Chr3:12921908-12921927 | None:intergenic | 15.0% |
| !!! | GTTTTCTTTTCTATAAAAAA+AGG | - | Chr3:12922386-12922405 | None:intergenic | 15.0% |
| !!! | TCGAAAAAAAAAAAGATTTT+AGG | + | Chr3:12921913-12921932 | MsG0380012222.01.T01:intron | 15.0% |
| !!! | TGAAACCATTTTTTTAATTT+GGG | + | Chr3:12924167-12924186 | MsG0380012222.01.T01:intron | 15.0% |
| !!! | TTTTTATAGAACATTTTTAC+CGG | + | Chr3:12922242-12922261 | MsG0380012222.01.T01:intron | 15.0% |
| !! | ACCATTAATTTATTCATCAA+CGG | - | Chr3:12923239-12923258 | None:intergenic | 20.0% |
| !! | ATCAAATAATAGGTAAAAAG+AGG | - | Chr3:12923361-12923380 | None:intergenic | 20.0% |
| !! | TAAAATGAGATATTTGATGA+TGG | - | Chr3:12924524-12924543 | None:intergenic | 20.0% |
| !! | TACAACTATAATAAAAACCA+TGG | - | Chr3:12923801-12923820 | None:intergenic | 20.0% |
| !! | TGACGAAAAATAATTGAAAA+AGG | + | Chr3:12924360-12924379 | MsG0380012222.01.T01:intron | 20.0% |
| !!! | ATAAAAATTATTGAGCATTG+AGG | - | Chr3:12923753-12923772 | None:intergenic | 20.0% |
| !!! | ATAATTTTCCAATTATGTGT+AGG | + | Chr3:12924710-12924729 | MsG0380012222.01.T01:intron | 20.0% |
| !!! | CAAAAAGTACATCAAATAAT+AGG | - | Chr3:12923371-12923390 | None:intergenic | 20.0% |
| !!! | CTTTAAAGAAAATATATCTC+TGG | - | Chr3:12921766-12921785 | None:intergenic | 20.0% |
| !!! | GAAACCATTTTTTTAATTTG+GGG | + | Chr3:12924168-12924187 | MsG0380012222.01.T01:intron | 20.0% |
| !!! | TTTATTTTGTACCTTACTAA+TGG | - | Chr3:12924060-12924079 | None:intergenic | 20.0% |
| !!! | TTTCAATTATTTTTCGTCAA+AGG | - | Chr3:12924359-12924378 | None:intergenic | 20.0% |
| !!! | TTTTATTTATTTGATGTGCT+AGG | + | Chr3:12921644-12921663 | MsG0380012222.01.T01:intron | 20.0% |
| ! | AAAAATACTATGAGAAGGTT+AGG | + | Chr3:12924484-12924503 | MsG0380012222.01.T01:intron | 25.0% |
| ! | AGGAACATAAAAAAAGCTTA+TGG | - | Chr3:12922310-12922329 | None:intergenic | 25.0% |
| ! | ATGGTTTCATAAAAGACATT+CGG | - | Chr3:12924156-12924175 | None:intergenic | 25.0% |
| ! | CATTCCCCAAATTAAAAAAA+TGG | - | Chr3:12924175-12924194 | None:intergenic | 25.0% |
| ! | TACAATTTGAGAAATCAAAC+CGG | - | Chr3:12922264-12922283 | None:intergenic | 25.0% |
| ! | TGAATGAATAATCAATACCA+AGG | - | Chr3:12922465-12922484 | None:intergenic | 25.0% |
| ! | TGTCATATAGGACATTTATT+TGG | - | Chr3:12924647-12924666 | None:intergenic | 25.0% |
| !! | AAATCACTAAATTTTCTCCA+TGG | + | Chr3:12924618-12924637 | MsG0380012222.01.T01:intron | 25.0% |
| !! | ACCGTTGATGAATAAATTAA+TGG | + | Chr3:12923235-12923254 | MsG0380012222.01.T01:intron | 25.0% |
| !! | ATTTCTTTTAAGCAAAGTCT+CGG | - | Chr3:12922949-12922968 | None:intergenic | 25.0% |
| !! | GTATAATCTTGTTATACAGA+GGG | + | Chr3:12923390-12923409 | MsG0380012222.01.T01:intron | 25.0% |
| !! | TCTCAATGATTTTGTCATAT+AGG | - | Chr3:12924659-12924678 | None:intergenic | 25.0% |
| !! | TGTATAATCTTGTTATACAG+AGG | + | Chr3:12923389-12923408 | MsG0380012222.01.T01:intron | 25.0% |
| !! | TTTTAACCATGCTAGATTAT+GGG | + | Chr3:12921714-12921733 | MsG0380012222.01.T01:intron | 25.0% |
| !!! | AACAACAATTTTGATGAACA+AGG | - | Chr3:12924310-12924329 | None:intergenic | 25.0% |
| !!! | ACTTTTTCCATTTACAGATA+AGG | + | Chr3:12924082-12924101 | MsG0380012222.01.T01:intron | 25.0% |
| !!! | ATTTATTTTTCAAACTCTGC+AGG | + | Chr3:12922992-12923011 | MsG0380012222.01.T01:intron | 25.0% |
| !!! | ATTTTAACCATGCTAGATTA+TGG | + | Chr3:12921713-12921732 | MsG0380012222.01.T01:intron | 25.0% |
| !!! | TATTATTCATGAAAGTGTCA+AGG | + | Chr3:12923932-12923951 | MsG0380012222.01.T01:CDS | 25.0% |
| AACAGATATCTCAACTATGT+TGG | - | Chr3:12924110-12924129 | None:intergenic | 30.0% | |
| AATAATCAATACCAAGGTCT+TGG | - | Chr3:12922459-12922478 | None:intergenic | 30.0% | |
| ACAGATTAGAAAAGCTTATG+AGG | + | Chr3:12923078-12923097 | MsG0380012222.01.T01:CDS | 30.0% | |
| AGATGAGATCAATCCAAAAT+TGG | + | Chr3:12923893-12923912 | MsG0380012222.01.T01:CDS | 30.0% | |
| AGATTAGAAAAGCTTATGAG+GGG | + | Chr3:12923080-12923099 | MsG0380012222.01.T01:CDS | 30.0% | |
| AGGAACATAAAAAGAGCTTA+TGG | - | Chr3:12922348-12922367 | None:intergenic | 30.0% | |
| ATTCATTCAATAATAACGCC+AGG | + | Chr3:12922476-12922495 | MsG0380012222.01.T01:intron | 30.0% | |
| CAGATTAGAAAAGCTTATGA+GGG | + | Chr3:12923079-12923098 | MsG0380012222.01.T01:CDS | 30.0% | |
| CATATCCTAGCTAACAAAAA+TGG | - | Chr3:12922408-12922427 | None:intergenic | 30.0% | |
| CCACAAAAAATACTATGAGA+AGG | + | Chr3:12924479-12924498 | MsG0380012222.01.T01:intron | 30.0% | |
| CTTATGATTGATCAATGTGA+TGG | + | Chr3:12922794-12922813 | MsG0380012222.01.T01:intron | 30.0% | |
| GGTTCAAGTCAAATGTAAAA+TGG | - | Chr3:12924233-12924252 | None:intergenic | 30.0% | |
| TACTACGTAACACCATTTAT+GGG | + | Chr3:12922521-12922540 | MsG0380012222.01.T01:intron | 30.0% | |
| TCTTGGTATTTAGTTGAACT+GGG | - | Chr3:12922442-12922461 | None:intergenic | 30.0% | |
| TGTCACAAATGATGTTTATG+CGG | + | Chr3:12923644-12923663 | MsG0380012222.01.T01:CDS | 30.0% | |
| TTTATGGGTAGTAAACAAAC+AGG | - | Chr3:12921839-12921858 | None:intergenic | 30.0% | |
| ! | ATTGAGGCACTAATACATTA+TGG | - | Chr3:12923737-12923756 | None:intergenic | 30.0% |
| ! | CAGATCACAATTTAAAACCA+TGG | + | Chr3:12923781-12923800 | MsG0380012222.01.T01:intron | 30.0% |
| ! | TTTCTTTTAAGCAAAGTCTC+GGG | - | Chr3:12922948-12922967 | None:intergenic | 30.0% |
| ! | TTTTGATCAATGTAGCAATC+AGG | + | Chr3:12923455-12923474 | MsG0380012222.01.T01:CDS | 30.0% |
| !! | AAAGGTTAACTTTTTCTGAG+AGG | - | Chr3:12922368-12922387 | None:intergenic | 30.0% |
| !! | AAGTGAGTTGGTCAATTTAA+AGG | - | Chr3:12923191-12923210 | None:intergenic | 30.0% |
| !! | ATTATTTTTCGTCAAAGGTG+TGG | - | Chr3:12924354-12924373 | None:intergenic | 30.0% |
| !! | GAAAACCATTTTTGTTAGCT+AGG | + | Chr3:12922400-12922419 | MsG0380012222.01.T01:intron | 30.0% |
| !! | TGAGATATTTGATGATGGAA+AGG | - | Chr3:12924519-12924538 | None:intergenic | 30.0% |
| !!! | CCTTCTCATAGTATTTTTTG+TGG | - | Chr3:12924482-12924501 | None:intergenic | 30.0% |
| AACATCAAACTCAGTCGAAT+CGG | + | Chr3:12923676-12923695 | MsG0380012222.01.T01:intron | 35.0% | |
| ACAACGTCAAATTGTTACCA+TGG | + | Chr3:12924269-12924288 | MsG0380012222.01.T01:intron | 35.0% | |
| ACTACGTAACACCATTTATG+GGG | + | Chr3:12922522-12922541 | MsG0380012222.01.T01:intron | 35.0% | |
| AGCTATAGTGCTATGTTAGT+AGG | - | Chr3:12922618-12922637 | None:intergenic | 35.0% | |
| ATCAATGTAGCAATCAGGAA+TGG | + | Chr3:12923460-12923479 | MsG0380012222.01.T01:CDS | 35.0% | |
| ATGACCCAAAATTGCGATAA+TGG | - | Chr3:12923038-12923057 | None:intergenic | 35.0% | |
| ATTCAATAATAACGCCAGGT+AGG | + | Chr3:12922480-12922499 | MsG0380012222.01.T01:intron | 35.0% | |
| CATTGATCAAAACAGCATCA+CGG | - | Chr3:12923447-12923466 | None:intergenic | 35.0% | |
| CGAATCGGATTATGACATAA+TGG | + | Chr3:12923691-12923710 | MsG0380012222.01.T01:intron | 35.0% | |
| CTACTACGTAACACCATTTA+TGG | + | Chr3:12922520-12922539 | MsG0380012222.01.T01:intron | 35.0% | |
| GCAACAATGAAGAAGTCATT+AGG | + | Chr3:12923964-12923983 | MsG0380012222.01.T01:CDS | 35.0% | |
| GTCATAGAAATGTTCATCAG+AGG | + | Chr3:12923053-12923072 | MsG0380012222.01.T01:CDS | 35.0% | |
| GTCTTGGTATTTAGTTGAAC+TGG | - | Chr3:12922443-12922462 | None:intergenic | 35.0% | |
| TAACACCATTTATGGGGATA+AGG | + | Chr3:12922528-12922547 | MsG0380012222.01.T01:intron | 35.0% | |
| TATGGTATCTCAAATCTGAG+AGG | - | Chr3:12922330-12922349 | None:intergenic | 35.0% | |
| TCAACTAAATACCAAGACCT+TGG | + | Chr3:12922445-12922464 | MsG0380012222.01.T01:intron | 35.0% | |
| TCATTAGGATTCTTACCACA+AGG | + | Chr3:12923979-12923998 | MsG0380012222.01.T01:CDS | 35.0% | |
| TGCTGCAAGTAAAGAACATA+AGG | - | Chr3:12922125-12922144 | None:intergenic | 35.0% | |
| TGTTTGGCTATGAACAACAA+TGG | - | Chr3:12921542-12921561 | None:intergenic | 35.0% | |
| TTGATGAACAAGGCAAATTG+CGG | - | Chr3:12924300-12924319 | None:intergenic | 35.0% | |
| ! | AAATTTGGAACCGATGAAGA+TGG | + | Chr3:12924753-12924772 | MsG0380012222.01.T01:CDS | 35.0% |
| ! | AAGGCCATTATCGCAATTTT+GGG | + | Chr3:12923031-12923050 | MsG0380012222.01.T01:CDS | 35.0% |
| ! | AAGTTCATCCTCACTCTTTT+GGG | + | Chr3:12924900-12924919 | MsG0380012222.01.T01:CDS | 35.0% |
| ! | ACAATAAAGAATGACTTGCC+TGG | - | Chr3:12923627-12923646 | None:intergenic | 35.0% |
| ! | ATTCACCTTTGAAAGCAAGT+CGG | - | Chr3:12921591-12921610 | None:intergenic | 35.0% |
| ! | GTTGTAAATCTAAAGCGACA+GGG | - | Chr3:12924254-12924273 | None:intergenic | 35.0% |
| !! | ATTTTTCAAACTCTGCAGGA+TGG | + | Chr3:12922996-12923015 | MsG0380012222.01.T01:intron | 35.0% |
| !! | CATAAATGGTGTTACGTAGT+AGG | - | Chr3:12922522-12922541 | None:intergenic | 35.0% |
| !! | GAAAGTGTCAAGGAAAAGAA+AGG | + | Chr3:12923942-12923961 | MsG0380012222.01.T01:CDS | 35.0% |
| !! | TTTTTCAAACTCTGCAGGAT+GGG | + | Chr3:12922997-12923016 | MsG0380012222.01.T01:intron | 35.0% |
| !!! | CTAAGTTGTTTTTTCCTACC+TGG | - | Chr3:12922497-12922516 | None:intergenic | 35.0% |
| AACACACCCATAATCTAGCA+TGG | - | Chr3:12921723-12921742 | None:intergenic | 40.0% | |
| AACCGTTATCGAGATGAACA+TGG | + | Chr3:12924029-12924048 | MsG0380012222.01.T01:CDS | 40.0% | |
| AATGTGACTTCCGGATATTG+AGG | - | Chr3:12922849-12922868 | None:intergenic | 40.0% | |
| ACATGGCATCTCCATTAGTA+AGG | + | Chr3:12924046-12924065 | MsG0380012222.01.T01:CDS | 40.0% | |
| ACGTTTGTAGCGGTTATGAT+AGG | - | Chr3:12923560-12923579 | None:intergenic | 40.0% | |
| AGAAATCTCTGGTGACTTTG+AGG | + | Chr3:12923138-12923157 | MsG0380012222.01.T01:CDS | 40.0% | |
| AGCAGACACATCTTCTTCTA+TGG | - | Chr3:12923584-12923603 | None:intergenic | 40.0% | |
| CATCTTGAACAGGAGATGTT+TGG | - | Chr3:12921558-12921577 | None:intergenic | 40.0% | |
| CGCAATGCGATCAAGAAATT+TGG | + | Chr3:12924738-12924757 | MsG0380012222.01.T01:CDS | 40.0% | |
| CTTCTATGGAACGTTTGTAG+CGG | - | Chr3:12923570-12923589 | None:intergenic | 40.0% | |
| GAGTCTAGATCCTCAATATC+CGG | + | Chr3:12922836-12922855 | MsG0380012222.01.T01:intron | 40.0% | |
| GATTCGACTGAGTTTGATGT+TGG | - | Chr3:12923677-12923696 | None:intergenic | 40.0% | |
| GCGCAAAACCTACACATAAT+TGG | - | Chr3:12924721-12924740 | None:intergenic | 40.0% | |
| GTGAGCTCATTTAGGTATGA+GGG | + | Chr3:12923870-12923889 | MsG0380012222.01.T01:intron | 40.0% | |
| GTTGGCACCTTATCTGTAAA+TGG | - | Chr3:12924092-12924111 | None:intergenic | 40.0% | |
| TATGGGGATAAGGCTAACTT+CGG | + | Chr3:12922538-12922557 | MsG0380012222.01.T01:intron | 40.0% | |
| TCCAAAATTGGCACAAACTG+AGG | + | Chr3:12923905-12923924 | MsG0380012222.01.T01:CDS | 40.0% | |
| TGCCATGTTCATCTCGATAA+CGG | - | Chr3:12924034-12924053 | None:intergenic | 40.0% | |
| TGGCAACAAAGACTATCATG+TGG | + | Chr3:12923480-12923499 | MsG0380012222.01.T01:CDS | 40.0% | |
| TTCATCTCTGCAGAAATTGC+TGG | + | Chr3:12924398-12924417 | MsG0380012222.01.T01:intron | 40.0% | |
| TTGGCTATGAACAACAATGG+TGG | - | Chr3:12921539-12921558 | None:intergenic | 40.0% | |
| ! | AGTTCATCCTCACTCTTTTG+GGG | + | Chr3:12924901-12924920 | MsG0380012222.01.T01:CDS | 40.0% |
| ! | CAAGGCCATTATCGCAATTT+TGG | + | Chr3:12923030-12923049 | MsG0380012222.01.T01:CDS | 40.0% |
| ! | CGTTGTAAATCTAAAGCGAC+AGG | - | Chr3:12924255-12924274 | None:intergenic | 40.0% |
| ! | CTTTAGCGTCTAAAGTGAGT+TGG | - | Chr3:12923203-12923222 | None:intergenic | 40.0% |
| ! | GAAGTTCATCCTCACTCTTT+TGG | + | Chr3:12924899-12924918 | MsG0380012222.01.T01:CDS | 40.0% |
| ! | GATTTTGAGCAGCTTTTGGT+TGG | + | Chr3:12923843-12923862 | MsG0380012222.01.T01:intron | 40.0% |
| ! | GGACATTTATTTGGTAGCCA+TGG | - | Chr3:12924638-12924657 | None:intergenic | 40.0% |
| ! | TAGCTGTGTGCAATGTCTTT+TGG | - | Chr3:12924443-12924462 | None:intergenic | 40.0% |
| ! | TTTTCAAACTCTGCAGGATG+GGG | + | Chr3:12922998-12923017 | MsG0380012222.01.T01:intron | 40.0% |
| !! | GTTAGCCTTATCCCCATAAA+TGG | - | Chr3:12922536-12922555 | None:intergenic | 40.0% |
| !! | TTGGATTGGTGAGCTCATTT+AGG | + | Chr3:12923862-12923881 | MsG0380012222.01.T01:intron | 40.0% |
| AAGGAGCAAGACTCAACTTG+TGG | + | Chr3:12923998-12924017 | MsG0380012222.01.T01:CDS | 45.0% | |
| AAGGGCTGAAAAGGATCTGA+AGG | + | Chr3:12924797-12924816 | MsG0380012222.01.T01:CDS | 45.0% | |
| AAGTTGAGTCTTGCTCCTTG+TGG | - | Chr3:12923997-12924016 | None:intergenic | 45.0% | |
| ATCTCCTGTTCAAGATGCTG+AGG | + | Chr3:12921561-12921580 | MsG0380012222.01.T01:CDS | 45.0% | |
| CATGTTTCCCCAAAAGAGTG+AGG | - | Chr3:12924911-12924930 | None:intergenic | 45.0% | |
| CATTCGGCATGCAAAGATGT+CGG | - | Chr3:12924140-12924159 | None:intergenic | 45.0% | |
| GATTGTCACAAGGGCTGAAA+AGG | + | Chr3:12924788-12924807 | MsG0380012222.01.T01:CDS | 45.0% | |
| GCTATCAACTGAAGAGCTCT+TGG | + | Chr3:12923522-12923541 | MsG0380012222.01.T01:CDS | 45.0% | |
| GGTGAGCTCATTTAGGTATG+AGG | + | Chr3:12923869-12923888 | MsG0380012222.01.T01:intron | 45.0% | |
| TCGGAGTCTAATGTGACTTC+CGG | - | Chr3:12922858-12922877 | None:intergenic | 45.0% | |
| TCTTGAAGATGCAGTCTCCA+AGG | + | Chr3:12924857-12924876 | MsG0380012222.01.T01:CDS | 45.0% | |
| TTATACAGAGGGCTGTGTAC+CGG | + | Chr3:12923401-12923420 | MsG0380012222.01.T01:intron | 45.0% | |
| ! | ATGAGTCGGTGGGTTCATAT+AGG | + | Chr3:12922886-12922905 | MsG0380012222.01.T01:intron | 45.0% |
| ! | GCCTCAGTTTGTGCCAATTT+TGG | - | Chr3:12923909-12923928 | None:intergenic | 45.0% |
| ! | GCGTGATTTTGAGCAGCTTT+TGG | + | Chr3:12923839-12923858 | MsG0380012222.01.T01:intron | 45.0% |
| ! | TTATGAGGGGCTTTTCGAAG+AGG | + | Chr3:12923093-12923112 | MsG0380012222.01.T01:CDS | 45.0% |
| !! | TGAGCAGCTTTTGGTTGGAT+TGG | + | Chr3:12923848-12923867 | MsG0380012222.01.T01:intron | 45.0% |
| !! | ATTAAATGTTATAAAAAAAA+TGG | - | Chr3:12922176-12922195 | None:intergenic | 5.0% |
| !!! | TTTTAAAATTTGATTTTTAT+GGG | - | Chr3:12921854-12921873 | None:intergenic | 5.0% |
| !!! | TTTTTAAAATTTGATTTTTA+TGG | - | Chr3:12921855-12921874 | None:intergenic | 5.0% |
| AAAACAGCATCACGGTCTGC+AGG | - | Chr3:12923439-12923458 | None:intergenic | 50.0% | |
| AGAGCCTCAGCATCTTGAAC+AGG | - | Chr3:12921568-12921587 | None:intergenic | 50.0% | |
| AGTCTCCAAGGAAACCTCAG+GGG | + | Chr3:12924869-12924888 | MsG0380012222.01.T01:CDS | 50.0% | |
| CAGTCTCCAAGGAAACCTCA+GGG | + | Chr3:12924868-12924887 | MsG0380012222.01.T01:CDS | 50.0% | |
| CGTCTCGAGTCAGAAATCTC+TGG | + | Chr3:12923127-12923146 | MsG0380012222.01.T01:CDS | 50.0% | |
| CTCCGACCAGTCTAATGAGT+CGG | + | Chr3:12922872-12922891 | MsG0380012222.01.T01:intron | 50.0% | |
| GAACTTCTTGTAGTCCCCTG+AGG | - | Chr3:12924886-12924905 | None:intergenic | 50.0% | |
| GACCAGTCTAATGAGTCGGT+GGG | + | Chr3:12922876-12922895 | MsG0380012222.01.T01:intron | 50.0% | |
| ! | GCTCTCCGACTTGCTTTCAA+AGG | + | Chr3:12921583-12921602 | MsG0380012222.01.T01:CDS | 50.0% |
| !! | AACCCACCGACTCATTAGAC+TGG | - | Chr3:12922881-12922900 | None:intergenic | 50.0% |
| !! | AGGATGGGGTGCTGATAACA+AGG | + | Chr3:12923012-12923031 | MsG0380012222.01.T01:intron | 50.0% |
| !! | CACCGACTCATTAGACTGGT+CGG | - | Chr3:12922877-12922896 | None:intergenic | 50.0% |
| ACTTGCCTGGCGAAGATGAC+CGG | - | Chr3:12923614-12923633 | None:intergenic | 55.0% | |
| CAGCCCTTGTGACAATCACG+CGG | - | Chr3:12924785-12924804 | None:intergenic | 55.0% | |
| CGACCAGTCTAATGAGTCGG+TGG | + | Chr3:12922875-12922894 | MsG0380012222.01.T01:intron | 55.0% | |
| CTGAAGAGCTCTTGGCAGTG+AGG | + | Chr3:12923530-12923549 | MsG0380012222.01.T01:CDS | 55.0% | |
| CTGCAGGTTCCAACATCCAC+CGG | - | Chr3:12923423-12923442 | None:intergenic | 55.0% | |
| GAGCCGCGTGATTGTCACAA+GGG | + | Chr3:12924779-12924798 | MsG0380012222.01.T01:CDS | 55.0% | |
| GATGTGTCTGCTCACACCAC+CGG | + | Chr3:12923592-12923611 | MsG0380012222.01.T01:CDS | 55.0% | |
| GCAGTCTCCAAGGAAACCTC+AGG | + | Chr3:12924867-12924886 | MsG0380012222.01.T01:CDS | 55.0% | |
| GCGGCTCAGTCCATCTTCAT+CGG | - | Chr3:12924766-12924785 | None:intergenic | 55.0% | |
| GTAGTCCCCTGAGGTTTCCT+TGG | - | Chr3:12924877-12924896 | None:intergenic | 55.0% | |
| TGAGCCGCGTGATTGTCACA+AGG | + | Chr3:12924778-12924797 | MsG0380012222.01.T01:CDS | 55.0% | |
| GGCAAATTGCGGTCGTGCCA+TGG | - | Chr3:12924289-12924308 | None:intergenic | 60.0% | |
| TACAGAGGGCTGTGTACCGG+TGG | + | Chr3:12923404-12923423 | MsG0380012222.01.T01:intron | 60.0% | |
| ! | GGCTGTGTACCGGTGGATGT+TGG | + | Chr3:12923411-12923430 | MsG0380012222.01.T01:CDS | 60.0% |
| CACCACCGGTCATCTTCGCC+AGG | + | Chr3:12923606-12923625 | MsG0380012222.01.T01:CDS | 65.0% | |
| TGCCTGGCGAAGATGACCGG+TGG | - | Chr3:12923611-12923630 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 12921532 | 12924935 | 12921532 | ID=MsG0380012222.01;Name=MsG0380012222.01 |
| Chr3 | mRNA | 12921532 | 12924935 | 12921532 | ID=MsG0380012222.01.T01;Parent=MsG0380012222.01;Name=MsG0380012222.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|5|0|287 |
| Chr3 | exon | 12921532 | 12921604 | 12921532 | ID=MsG0380012222.01.T01:exon:429;Parent=MsG0380012222.01.T01 |
| Chr3 | exon | 12923014 | 12923159 | 12923014 | ID=MsG0380012222.01.T01:exon:430;Parent=MsG0380012222.01.T01 |
| Chr3 | exon | 12923409 | 12923665 | 12923409 | ID=MsG0380012222.01.T01:exon:431;Parent=MsG0380012222.01.T01 |
| Chr3 | exon | 12923884 | 12924067 | 12923884 | ID=MsG0380012222.01.T01:exon:432;Parent=MsG0380012222.01.T01 |
| Chr3 | exon | 12924732 | 12924935 | 12924732 | ID=MsG0380012222.01.T01:exon:433;Parent=MsG0380012222.01.T01 |
| Chr3 | CDS | 12921532 | 12921604 | 12921532 | ID=MsG0380012222.01.T01:cds;Parent=MsG0380012222.01.T01 |
| Chr3 | CDS | 12923014 | 12923159 | 12923014 | ID=MsG0380012222.01.T01:cds;Parent=MsG0380012222.01.T01 |
| Chr3 | CDS | 12923409 | 12923665 | 12923409 | ID=MsG0380012222.01.T01:cds;Parent=MsG0380012222.01.T01 |
| Chr3 | CDS | 12923884 | 12924067 | 12923884 | ID=MsG0380012222.01.T01:cds;Parent=MsG0380012222.01.T01 |
| Chr3 | CDS | 12924732 | 12924935 | 12924732 | ID=MsG0380012222.01.T01:cds;Parent=MsG0380012222.01.T01 |
| Gene Sequence |
| Protein sequence |
