Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000028.01.T01 | XP_003589554.2 | 93.227 | 251 | 16 | 1 | 1 | 250 | 5 | 255 | 4.61E-170 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000028.01.T01 | Q9LNU3 | 73.391 | 233 | 61 | 1 | 19 | 250 | 20 | 252 | 1.72E-127 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000028.01.T01 | G7I8C4 | 93.227 | 251 | 16 | 1 | 1 | 250 | 5 | 255 | 3.49e-170 | 479 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049008.01 | MsG0180000028.01 | 0.806787 | 6.941881e-50 | 3.801688e-47 |
| MsG0180000028.01 | MsG0180000029.01 | 0.806776 | 6.981039e-50 | 3.821950e-47 |
| MsG0180000028.01 | MsG0180000074.01 | 0.809687 | 1.673291e-50 | 9.889766e-48 |
| MsG0180000028.01 | MsG0180001004.01 | 0.829889 | 3.997174e-55 | 4.145546e-52 |
| MsG0180000028.01 | MsG0180001029.01 | 0.823581 | 1.282128e-53 | 1.108451e-50 |
| MsG0180000028.01 | MsG0180002238.01 | 0.814370 | 1.595027e-51 | 1.068282e-48 |
| MsG0180000028.01 | MsG0180002404.01 | 0.822302 | 2.547355e-53 | 2.123973e-50 |
| MsG0180000028.01 | MsG0180003484.01 | 0.805325 | 1.409610e-49 | 7.435955e-47 |
| MsG0180000028.01 | MsG0180003504.01 | 0.818503 | 1.895158e-52 | 1.421136e-49 |
| MsG0180000028.01 | MsG0180003905.01 | 0.816611 | 5.057134e-52 | 3.600419e-49 |
| MsG0180000028.01 | MsG0180004467.01 | 0.828858 | 7.116932e-55 | 7.160024e-52 |
| MsG0180000028.01 | MsG0180005741.01 | 0.818948 | 1.501656e-52 | 1.140110e-49 |
| MsG0180000028.01 | MsG0180006010.01 | 0.810711 | 1.006318e-50 | 6.110481e-48 |
| MsG0180000028.01 | MsG0180006116.01 | 0.802079 | 6.651196e-49 | 3.228373e-46 |
| MsG0180000028.01 | MsG0180006183.01 | 0.826720 | 2.323911e-54 | 2.196866e-51 |
| MsG0180000028.01 | MsG0280006851.01 | 0.815104 | 1.096862e-51 | 7.492880e-49 |
| MsG0180000028.01 | MsG0280007199.01 | 0.814181 | 1.755963e-51 | 1.170040e-48 |
| MsG0180000028.01 | MsG0280007689.01 | 0.832043 | 1.183757e-55 | 1.307833e-52 |
| MsG0180000028.01 | MsG0280007731.01 | 0.821897 | 3.161724e-53 | 2.605894e-50 |
| MsG0180000028.01 | MsG0280008226.01 | 0.807525 | 4.845024e-50 | 2.704713e-47 |
| MsG0180000028.01 | MsG0280009432.01 | 0.807523 | 4.849898e-50 | 2.707301e-47 |
| MsG0180000028.01 | MsG0280009526.01 | 0.804924 | 1.710398e-49 | 8.930868e-47 |
| MsG0180000028.01 | MsG0280010425.01 | 0.800955 | 1.130677e-48 | 5.334454e-46 |
| MsG0180000028.01 | MsG0280010617.01 | 0.825597 | 4.297029e-54 | 3.934588e-51 |
| MsG0180000028.01 | MsG0280010854.01 | -0.812882 | 3.390606e-51 | 2.181103e-48 |
| MsG0180000028.01 | MsG0380012222.01 | 0.829530 | 4.890144e-55 | 5.018165e-52 |
| MsG0180000028.01 | MsG0380015513.01 | 0.807870 | 4.092528e-50 | 2.305168e-47 |
| MsG0180000028.01 | MsG0380016031.01 | 0.815914 | 7.241323e-52 | 5.057902e-49 |
| MsG0180000028.01 | MsG0380016250.01 | 0.836593 | 8.545307e-57 | 1.081849e-53 |
| MsG0180000028.01 | MsG0380016393.01 | 0.805821 | 1.109077e-49 | 5.925877e-47 |
| MsG0180000028.01 | MsG0380016485.01 | 0.814801 | 1.280320e-51 | 8.675366e-49 |
| MsG0180000028.01 | MsG0380016490.01 | 0.827306 | 1.682807e-54 | 1.618431e-51 |
| MsG0180000028.01 | MsG0380017168.01 | 0.811367 | 7.254061e-51 | 4.481769e-48 |
| MsG0180000028.01 | MsG0380017594.01 | 0.817292 | 3.555959e-52 | 2.579237e-49 |
| MsG0180000028.01 | MsG0380017621.01 | 0.817206 | 3.719465e-52 | 2.691463e-49 |
| MsG0180000028.01 | MsG0380017901.01 | 0.821292 | 4.363914e-53 | 3.535799e-50 |
| MsG0180000028.01 | MsG0480018362.01 | 0.845709 | 3.429849e-59 | 5.766538e-56 |
| MsG0180000028.01 | MsG0480018767.01 | 0.800375 | 1.484450e-48 | 6.901183e-46 |
| MsG0180000028.01 | MsG0480019663.01 | 0.811554 | 6.604723e-51 | 4.100972e-48 |
| MsG0180000028.01 | MsG0480019817.01 | 0.848693 | 5.208563e-60 | 9.638421e-57 |
| MsG0180000028.01 | MsG0480019818.01 | 0.867393 | 1.415141e-65 | 4.933623e-62 |
| MsG0180000028.01 | MsG0480020810.01 | 0.819882 | 9.196983e-53 | 7.165604e-50 |
| MsG0180000028.01 | MsG0480021091.01 | 0.803089 | 4.117604e-49 | 2.050590e-46 |
| MsG0180000028.01 | MsG0480021224.01 | 0.859763 | 3.301494e-63 | 8.818177e-60 |
| MsG0180000028.01 | MsG0480021227.01 | 0.811335 | 7.372123e-51 | 4.550712e-48 |
| MsG0180000028.01 | MsG0480021230.01 | 0.830605 | 2.673370e-55 | 2.830399e-52 |
| MsG0180000028.01 | MsG0480021231.01 | 0.822034 | 2.939413e-53 | 2.431985e-50 |
| MsG0180000028.01 | MsG0480021740.01 | 0.804061 | 2.588170e-49 | 1.321671e-46 |
| MsG0180000028.01 | MsG0480023663.01 | 0.809748 | 1.623403e-50 | 9.610819e-48 |
| MsG0180000028.01 | MsG0480023913.01 | 0.819562 | 1.088450e-52 | 8.404957e-50 |
| MsG0180000028.01 | MsG0580024980.01 | 0.811915 | 5.512839e-51 | 3.455662e-48 |
| MsG0180000028.01 | MsG0580025633.01 | 0.820972 | 5.170542e-53 | 4.152777e-50 |
| MsG0180000028.01 | MsG0580026180.01 | 0.822280 | 2.577004e-53 | 2.147354e-50 |
| MsG0180000028.01 | MsG0580026343.01 | 0.807529 | 4.835548e-50 | 2.699714e-47 |
| MsG0180000028.01 | MsG0580026521.01 | 0.808317 | 3.287332e-50 | 1.873696e-47 |
| MsG0180000028.01 | MsG0580029218.01 | 0.814974 | 1.172022e-51 | 7.978714e-49 |
| MsG0180000028.01 | MsG0580030141.01 | 0.819161 | 1.343034e-52 | 1.025537e-49 |
| MsG0180000028.01 | MsG0680030296.01 | 0.805113 | 1.561039e-49 | 8.190109e-47 |
| MsG0180000028.01 | MsG0680031200.01 | 0.810720 | 1.001993e-50 | 6.085665e-48 |
| MsG0180000028.01 | MsG0680034238.01 | 0.805045 | 1.613601e-49 | 8.450950e-47 |
| MsG0180000028.01 | MsG0780036258.01 | 0.802925 | 4.451802e-49 | 2.207918e-46 |
| MsG0180000028.01 | MsG0780036259.01 | 0.801563 | 8.489332e-49 | 4.066946e-46 |
| MsG0180000028.01 | MsG0780038307.01 | 0.804569 | 2.028875e-49 | 1.049611e-46 |
| MsG0180000028.01 | MsG0780038318.01 | 0.824870 | 6.385968e-54 | 5.727565e-51 |
| MsG0180000028.01 | MsG0780038647.01 | 0.856350 | 3.414316e-62 | 8.125982e-59 |
| MsG0180000028.01 | MsG0780038657.01 | 0.801002 | 1.105543e-48 | 5.222354e-46 |
| MsG0180000028.01 | MsG0780040560.01 | 0.819147 | 1.352943e-52 | 1.032691e-49 |
| MsG0180000028.01 | MsG0780040716.01 | 0.839160 | 1.871402e-57 | 2.562222e-54 |
| MsG0180000028.01 | MsG0780040847.01 | 0.817504 | 3.186048e-52 | 2.324521e-49 |
| MsG0180000028.01 | MsG0780040978.01 | 0.824167 | 9.347556e-54 | 8.215940e-51 |
| MsG0180000028.01 | MsG0780040990.01 | 0.813982 | 1.942349e-51 | 1.287243e-48 |
| MsG0180000028.01 | MsG0780041248.01 | 0.802194 | 6.298407e-49 | 3.066034e-46 |
| MsG0180000028.01 | MsG0780041403.01 | 0.808845 | 2.535722e-50 | 1.465328e-47 |
| MsG0180000028.01 | MsG0780041823.01 | 0.850034 | 2.204456e-60 | 4.261669e-57 |
| MsG0180000028.01 | MsG0880042262.01 | 0.809299 | 2.027087e-50 | 1.185776e-47 |
| MsG0180000028.01 | MsG0880042392.01 | 0.818929 | 1.516888e-52 | 1.151095e-49 |
| MsG0180000028.01 | MsG0880043495.01 | 0.815162 | 1.064563e-51 | 7.283967e-49 |
| MsG0180000028.01 | MsG0880043882.01 | 0.818128 | 2.303556e-52 | 1.709637e-49 |
| MsG0180000028.01 | MsG0880044712.01 | 0.811203 | 7.873303e-51 | 4.843464e-48 |
| MsG0180000028.01 | MsG0880045725.01 | 0.806015 | 1.010063e-49 | 5.423645e-47 |
| MsG0180000028.01 | MsG0880045801.01 | 0.802622 | 5.140298e-49 | 2.529823e-46 |
| MsG0180000028.01 | MsG0880046870.01 | 0.819339 | 1.223275e-52 | 9.386556e-50 |
| MsG0180000028.01 | MsG0880046945.01 | 0.809886 | 1.516061e-50 | 9.007188e-48 |
| MsG0180000028.01 | MsG0880047057.01 | 0.826567 | 2.527006e-54 | 2.378539e-51 |
| MsG0180000028.01 | MsG0880047414.01 | 0.800495 | 1.403220e-48 | 6.543202e-46 |
| MsG0180000028.01 | MsG0880047450.01 | 0.856825 | 2.475925e-62 | 5.984291e-59 |
| MsG0180000028.01 | MsG0880047704.01 | 0.816652 | 4.953268e-52 | 3.530479e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180000028.01 | MsG0580026206.01 | PPI |
| MsG0880044358.01 | MsG0180000028.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000028.01.T01 | MTR_1g026020 | 93.227 | 251 | 16 | 1 | 1 | 250 | 5 | 255 | 8.84e-174 | 479 |
| MsG0180000028.01.T01 | MTR_1g085460 | 62.931 | 232 | 84 | 2 | 21 | 250 | 26 | 257 | 9.11e-107 | 309 |
| MsG0180000028.01.T01 | MTR_7g111010 | 58.167 | 251 | 103 | 2 | 2 | 250 | 4 | 254 | 3.76e-106 | 307 |
| MsG0180000028.01.T01 | MTR_7g110990 | 62.281 | 228 | 84 | 2 | 25 | 250 | 12 | 239 | 7.79e-105 | 303 |
| MsG0180000028.01.T01 | MTR_3g094060 | 62.667 | 225 | 80 | 3 | 24 | 247 | 30 | 251 | 8.37e-103 | 299 |
| MsG0180000028.01.T01 | MTR_3g094040 | 63.229 | 223 | 78 | 3 | 24 | 245 | 30 | 249 | 1.70e-102 | 298 |
| MsG0180000028.01.T01 | MTR_4g081950 | 59.336 | 241 | 93 | 4 | 7 | 245 | 42 | 279 | 3.27e-101 | 296 |
| MsG0180000028.01.T01 | MTR_5g075320 | 59.184 | 245 | 91 | 4 | 6 | 244 | 5 | 246 | 2.11e-99 | 290 |
| MsG0180000028.01.T01 | MTR_5g041700 | 56.098 | 246 | 104 | 3 | 1 | 245 | 1 | 243 | 4.79e-99 | 289 |
| MsG0180000028.01.T01 | MTR_3g435430 | 59.649 | 228 | 87 | 4 | 24 | 250 | 24 | 247 | 4.51e-97 | 284 |
| MsG0180000028.01.T01 | MTR_7g061720 | 60.000 | 225 | 86 | 3 | 25 | 247 | 32 | 254 | 1.29e-94 | 278 |
| MsG0180000028.01.T01 | MTR_5g079950 | 58.696 | 230 | 91 | 3 | 20 | 247 | 28 | 255 | 3.89e-94 | 277 |
| MsG0180000028.01.T01 | MTR_3g466760 | 59.504 | 242 | 92 | 4 | 6 | 244 | 17 | 255 | 5.34e-94 | 277 |
| MsG0180000028.01.T01 | MTR_3g466790 | 59.504 | 242 | 92 | 4 | 6 | 244 | 11 | 249 | 1.69e-93 | 275 |
| MsG0180000028.01.T01 | MTR_2g097030 | 57.826 | 230 | 93 | 3 | 20 | 247 | 29 | 256 | 4.60e-91 | 270 |
| MsG0180000028.01.T01 | MTR_7g011060 | 53.200 | 250 | 102 | 6 | 1 | 247 | 1 | 238 | 6.22e-88 | 261 |
| MsG0180000028.01.T01 | MTR_4g063975 | 56.522 | 230 | 96 | 3 | 20 | 247 | 27 | 254 | 4.33e-83 | 249 |
| MsG0180000028.01.T01 | MTR_7g013150 | 53.509 | 228 | 100 | 4 | 25 | 250 | 30 | 253 | 5.27e-83 | 249 |
| MsG0180000028.01.T01 | MTR_7g013120 | 53.275 | 229 | 100 | 5 | 25 | 250 | 29 | 253 | 1.25e-82 | 248 |
| MsG0180000028.01.T01 | MTR_6g012520 | 52.988 | 251 | 103 | 5 | 1 | 247 | 1 | 240 | 2.56e-81 | 244 |
| MsG0180000028.01.T01 | MTR_8g464350 | 52.609 | 230 | 103 | 4 | 23 | 250 | 29 | 254 | 7.61e-81 | 243 |
| MsG0180000028.01.T01 | MTR_8g058990 | 50.000 | 230 | 109 | 4 | 23 | 250 | 28 | 253 | 7.32e-79 | 238 |
| MsG0180000028.01.T01 | MTR_7g013140 | 48.627 | 255 | 122 | 5 | 1 | 250 | 1 | 251 | 5.56e-78 | 236 |
| MsG0180000028.01.T01 | MTR_5g011210 | 46.215 | 251 | 127 | 6 | 3 | 250 | 17 | 262 | 2.14e-74 | 227 |
| MsG0180000028.01.T01 | MTR_4g124340 | 46.154 | 234 | 121 | 4 | 16 | 247 | 52 | 282 | 5.23e-74 | 227 |
| MsG0180000028.01.T01 | MTR_5g076950 | 48.214 | 224 | 113 | 2 | 25 | 247 | 41 | 262 | 5.08e-71 | 219 |
| MsG0180000028.01.T01 | MTR_3g064510 | 46.983 | 232 | 116 | 4 | 23 | 247 | 51 | 282 | 4.03e-70 | 217 |
| MsG0180000028.01.T01 | MTR_4g102450 | 44.841 | 252 | 133 | 4 | 1 | 250 | 14 | 261 | 5.65e-70 | 216 |
| MsG0180000028.01.T01 | MTR_0040s0140 | 41.667 | 240 | 136 | 3 | 10 | 247 | 17 | 254 | 1.94e-66 | 206 |
| MsG0180000028.01.T01 | MTR_2g090255 | 40.161 | 249 | 142 | 4 | 1 | 247 | 7 | 250 | 7.65e-63 | 197 |
| MsG0180000028.01.T01 | MTR_0008s0120 | 53.571 | 112 | 52 | 0 | 139 | 250 | 88 | 199 | 3.94e-36 | 127 |
| MsG0180000028.01.T01 | MTR_6g012500 | 55.102 | 98 | 44 | 0 | 150 | 247 | 181 | 278 | 2.87e-35 | 127 |
| MsG0180000028.01.T01 | MTR_2g090270 | 28.431 | 204 | 120 | 7 | 58 | 250 | 70 | 258 | 4.51e-20 | 86.7 |
| MsG0180000028.01.T01 | MTR_1g085365 | 64.286 | 56 | 20 | 0 | 193 | 248 | 3 | 58 | 1.79e-19 | 79.7 |
| MsG0180000028.01.T01 | MTR_0122s0020 | 29.954 | 217 | 117 | 9 | 54 | 250 | 63 | 264 | 2.37e-19 | 84.7 |
| MsG0180000028.01.T01 | MTR_2g090265 | 28.431 | 204 | 120 | 8 | 58 | 250 | 68 | 256 | 2.21e-18 | 82.0 |
| MsG0180000028.01.T01 | MTR_4g028640 | 25.830 | 271 | 159 | 12 | 3 | 250 | 13 | 264 | 4.54e-13 | 67.4 |
| MsG0180000028.01.T01 | MTR_0809s0010 | 28.514 | 249 | 140 | 15 | 20 | 250 | 42 | 270 | 1.70e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000028.01.T01 | AT1G20190 | 73.391 | 233 | 61 | 1 | 19 | 250 | 20 | 252 | 1.76e-128 | 364 |
| MsG0180000028.01.T01 | AT1G20190 | 78.125 | 192 | 42 | 0 | 59 | 250 | 2 | 193 | 4.99e-116 | 330 |
| MsG0180000028.01.T01 | AT4G01630 | 61.905 | 231 | 86 | 2 | 22 | 250 | 25 | 255 | 3.98e-104 | 302 |
| MsG0180000028.01.T01 | AT2G37640 | 62.222 | 225 | 81 | 3 | 25 | 247 | 36 | 258 | 1.31e-98 | 289 |
| MsG0180000028.01.T01 | AT5G05290 | 56.680 | 247 | 100 | 5 | 1 | 245 | 10 | 251 | 2.46e-98 | 288 |
| MsG0180000028.01.T01 | AT1G69530 | 56.327 | 245 | 101 | 4 | 2 | 245 | 6 | 245 | 3.12e-98 | 287 |
| MsG0180000028.01.T01 | AT1G69530 | 56.327 | 245 | 101 | 4 | 2 | 245 | 6 | 245 | 3.12e-98 | 287 |
| MsG0180000028.01.T01 | AT1G69530 | 55.870 | 247 | 103 | 4 | 2 | 247 | 6 | 247 | 4.65e-98 | 288 |
| MsG0180000028.01.T01 | AT2G40610 | 61.435 | 223 | 81 | 4 | 24 | 244 | 29 | 248 | 5.40e-98 | 287 |
| MsG0180000028.01.T01 | AT2G03090 | 54.800 | 250 | 105 | 5 | 1 | 247 | 6 | 250 | 3.25e-96 | 282 |
| MsG0180000028.01.T01 | AT2G39700 | 59.130 | 230 | 90 | 3 | 20 | 247 | 26 | 253 | 1.00e-95 | 281 |
| MsG0180000028.01.T01 | AT5G02260 | 58.222 | 225 | 90 | 3 | 25 | 247 | 32 | 254 | 3.61e-94 | 277 |
| MsG0180000028.01.T01 | AT5G56320 | 58.590 | 227 | 90 | 3 | 22 | 247 | 26 | 249 | 4.58e-94 | 277 |
| MsG0180000028.01.T01 | AT5G56320 | 58.590 | 227 | 90 | 3 | 22 | 247 | 26 | 249 | 4.58e-94 | 277 |
| MsG0180000028.01.T01 | AT2G37640 | 63.462 | 208 | 73 | 2 | 41 | 247 | 28 | 233 | 8.07e-94 | 276 |
| MsG0180000028.01.T01 | AT5G56320 | 58.590 | 227 | 90 | 3 | 22 | 247 | 26 | 249 | 2.59e-93 | 276 |
| MsG0180000028.01.T01 | AT3G55500 | 57.826 | 230 | 93 | 3 | 20 | 247 | 29 | 256 | 1.61e-92 | 273 |
| MsG0180000028.01.T01 | AT1G26770 | 55.918 | 245 | 101 | 4 | 2 | 245 | 6 | 244 | 6.10e-91 | 269 |
| MsG0180000028.01.T01 | AT1G26770 | 55.918 | 245 | 101 | 4 | 2 | 245 | 16 | 254 | 8.68e-91 | 269 |
| MsG0180000028.01.T01 | AT2G28950 | 55.466 | 247 | 105 | 4 | 3 | 247 | 10 | 253 | 1.82e-90 | 268 |
| MsG0180000028.01.T01 | AT3G29030 | 55.856 | 222 | 87 | 3 | 25 | 245 | 38 | 249 | 3.39e-89 | 265 |
| MsG0180000028.01.T01 | AT3G15370 | 53.478 | 230 | 97 | 5 | 22 | 247 | 24 | 247 | 2.94e-83 | 249 |
| MsG0180000028.01.T01 | AT5G39310 | 50.000 | 230 | 108 | 5 | 23 | 250 | 88 | 312 | 1.03e-80 | 245 |
| MsG0180000028.01.T01 | AT1G69530 | 52.655 | 226 | 99 | 5 | 2 | 226 | 6 | 224 | 1.87e-80 | 242 |
| MsG0180000028.01.T01 | AT5G39280 | 50.218 | 229 | 108 | 4 | 23 | 250 | 52 | 275 | 2.36e-80 | 243 |
| MsG0180000028.01.T01 | AT5G39300 | 50.218 | 229 | 108 | 4 | 23 | 250 | 53 | 276 | 2.39e-80 | 243 |
| MsG0180000028.01.T01 | AT1G69530 | 56.039 | 207 | 85 | 4 | 2 | 207 | 6 | 207 | 4.15e-80 | 240 |
| MsG0180000028.01.T01 | AT5G39290 | 51.542 | 227 | 104 | 4 | 25 | 250 | 58 | 279 | 7.23e-80 | 242 |
| MsG0180000028.01.T01 | AT5G39270 | 50.655 | 229 | 107 | 4 | 23 | 250 | 56 | 279 | 1.00e-79 | 241 |
| MsG0180000028.01.T01 | AT3G15370 | 47.308 | 260 | 97 | 6 | 22 | 247 | 24 | 277 | 4.04e-78 | 237 |
| MsG0180000028.01.T01 | AT1G12560 | 47.210 | 233 | 118 | 4 | 20 | 250 | 32 | 261 | 1.48e-74 | 228 |
| MsG0180000028.01.T01 | AT3G03220 | 47.321 | 224 | 115 | 2 | 25 | 247 | 40 | 261 | 1.32e-68 | 213 |
| MsG0180000028.01.T01 | AT5G39260 | 47.391 | 230 | 109 | 4 | 23 | 250 | 43 | 262 | 4.02e-67 | 209 |
| MsG0180000028.01.T01 | AT1G62980 | 41.434 | 251 | 141 | 4 | 2 | 250 | 10 | 256 | 3.56e-66 | 206 |
| MsG0180000028.01.T01 | AT4G38210 | 38.866 | 247 | 142 | 4 | 8 | 247 | 8 | 252 | 4.32e-55 | 177 |
| MsG0180000028.01.T01 | AT4G28250 | 27.778 | 270 | 152 | 10 | 2 | 250 | 13 | 260 | 5.03e-21 | 89.4 |
| MsG0180000028.01.T01 | AT2G20750 | 31.890 | 254 | 143 | 14 | 13 | 250 | 28 | 267 | 8.05e-20 | 86.3 |
| MsG0180000028.01.T01 | AT4G28250 | 26.766 | 269 | 150 | 10 | 2 | 250 | 13 | 254 | 8.76e-18 | 80.5 |
| MsG0180000028.01.T01 | AT1G65680 | 26.378 | 254 | 156 | 12 | 13 | 250 | 35 | 273 | 3.90e-14 | 70.5 |
| MsG0180000028.01.T01 | AT1G65681 | 23.636 | 220 | 140 | 9 | 44 | 250 | 18 | 222 | 4.63e-13 | 67.0 |
| MsG0180000028.01.T01 | AT2G45110 | 25.339 | 221 | 125 | 9 | 54 | 250 | 55 | 259 | 6.20e-12 | 64.3 |
| MsG0180000028.01.T01 | AT4G38400 | 26.047 | 215 | 134 | 10 | 48 | 250 | 47 | 248 | 3.75e-11 | 62.0 |
| MsG0180000028.01.T01 | AT3G45960 | 27.830 | 212 | 119 | 12 | 55 | 250 | 6 | 199 | 5.56e-11 | 60.8 |
| MsG0180000028.01.T01 | AT3G45960 | 26.887 | 212 | 121 | 11 | 55 | 250 | 54 | 247 | 8.45e-11 | 61.2 |
Find 92 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCAAAGTATGTTTATTT+TGG | 0.050812 | 1:+487426 | MsG0180000028.01.T01:exon |
| ATCCAATCTGTTTCCATTAA+AGG | 0.093347 | 1:+488939 | MsG0180000028.01.T01:CDS |
| CATGAATTGTTATTCTTATT+TGG | 0.114271 | 1:+489408 | MsG0180000028.01.T01:three_prime_UTR |
| GTTCCTTCCAATTGGGAATT+TGG | 0.137567 | 1:+489095 | MsG0180000028.01.T01:CDS |
| TGCAGGAGGCTTGTGGTTTA+TGG | 0.210681 | 1:+487806 | MsG0180000028.01.T01:intron |
| GGTTCTAAAGTTATGGGTTT+TGG | 0.224842 | 1:+489174 | MsG0180000028.01.T01:three_prime_UTR |
| GGATGGCTATGTCAAGAAAT+TGG | 0.226118 | 1:+488976 | MsG0180000028.01.T01:CDS |
| TCCTATGCCTTCAAAGCTTC+TGG | 0.234899 | 1:+487484 | MsG0180000028.01.T01:CDS |
| ATACAATACAAAATGGAATT+TGG | 0.242942 | 1:-487356 | None:intergenic |
| AATTGGAAGGAACAATGTTT+TGG | 0.262015 | 1:-489085 | None:intergenic |
| CTATATAAATTTAAAGTCTT+AGG | 0.276222 | 1:-489605 | None:intergenic |
| CATAGCCATCCAATCAGTTT+TGG | 0.278389 | 1:-488964 | None:intergenic |
| TGTATTGTATCCTTCTACAT+TGG | 0.293199 | 1:+487369 | MsG0180000028.01.T01:five_prime_UTR |
| GACCCAAGATGGTGCATAAA+AGG | 0.304165 | 1:+487940 | MsG0180000028.01.T01:CDS |
| TCGTTTGGAAGATCAAAATT+TGG | 0.307168 | 1:-488000 | None:intergenic |
| CAAGAAATTGGGGTGCAAAT+TGG | 0.319801 | 1:+488988 | MsG0180000028.01.T01:CDS |
| AAAACATTGTTCCTTCCAAT+TGG | 0.325428 | 1:+489087 | MsG0180000028.01.T01:CDS |
| TCATAAGGGTTCTAAAGTTA+TGG | 0.343148 | 1:+489167 | MsG0180000028.01.T01:three_prime_UTR |
| CATAAGGGTTCTAAAGTTAT+GGG | 0.343779 | 1:+489168 | MsG0180000028.01.T01:three_prime_UTR |
| ACAGAAATTTGTGGCTGTTA+TGG | 0.346098 | 1:-487974 | None:intergenic |
| TAGAAGGATACAATACAAAA+TGG | 0.348561 | 1:-487363 | None:intergenic |
| GTATTGTATCCTTCTACATT+GGG | 0.350571 | 1:+487370 | MsG0180000028.01.T01:five_prime_UTR |
| GCCATATCAAAATGCTTTAG+AGG | 0.358797 | 1:-488045 | None:intergenic |
| CAATCTAATGCTTATTTGAA+TGG | 0.361539 | 1:+489011 | MsG0180000028.01.T01:CDS |
| CACCATCCTCCATCGTCGTT+TGG | 0.370587 | 1:-488015 | None:intergenic |
| AACCTTTAATGGAAACAGAT+TGG | 0.387190 | 1:-488941 | None:intergenic |
| AGTACTGCTTTGTTTAATGA+TGG | 0.399136 | 1:+487871 | MsG0180000028.01.T01:CDS |
| TTAAAGGTTCCAAAACTGAT+TGG | 0.401631 | 1:+488955 | MsG0180000028.01.T01:CDS |
| CTCTTCTGAATTAAGCCATA+TGG | 0.401661 | 1:+489381 | MsG0180000028.01.T01:three_prime_UTR |
| TGATATGGCACAACCTGCTT+GGG | 0.402518 | 1:+488059 | MsG0180000028.01.T01:CDS |
| TGCCTAAAACCCAATGTAGA+AGG | 0.403885 | 1:-487379 | None:intergenic |
| TTATGGAAATCTTATTCAAC+GGG | 0.407247 | 1:+487823 | MsG0180000028.01.T01:CDS |
| AAACATTGTTCCTTCCAATT+GGG | 0.415555 | 1:+489088 | MsG0180000028.01.T01:CDS |
| AAATCTTATTCAACGGGGTA+TGG | 0.415837 | 1:+487829 | MsG0180000028.01.T01:CDS |
| TAGTGATGCAGAAGGCACTA+TGG | 0.416704 | 1:+487539 | MsG0180000028.01.T01:CDS |
| ATCAGCAATCTGGCTGGTGC+TGG | 0.426311 | 1:+488912 | MsG0180000028.01.T01:CDS |
| GGAGTTAGGTTCAGTGTGAA+TGG | 0.426417 | 1:+488864 | MsG0180000028.01.T01:CDS |
| GATGGCTATGTCAAGAAATT+GGG | 0.440562 | 1:+488977 | MsG0180000028.01.T01:CDS |
| GGTCCATCCAGAAGCTTTGA+AGG | 0.448252 | 1:-487491 | None:intergenic |
| TTGATATGGCACAACCTGCT+TGG | 0.457983 | 1:+488058 | MsG0180000028.01.T01:CDS |
| ATCAGTAGTTGTGACCTTGA+AGG | 0.458996 | 1:-489045 | None:intergenic |
| TGCCCAAAATAAACATACTT+TGG | 0.461658 | 1:-487429 | None:intergenic |
| CAACCTGCTTGGGAAAAGAT+TGG | 0.464220 | 1:+488069 | MsG0180000028.01.T01:CDS |
| GGATCTTGCTAGAGAAAGAT+TGG | 0.465897 | 1:-489118 | None:intergenic |
| AACAATTCATGCAAGCCATA+TGG | 0.467285 | 1:-489396 | None:intergenic |
| GTTAGTGTTGATCAGCAATC+TGG | 0.470023 | 1:+488902 | MsG0180000028.01.T01:CDS |
| TGGTCAATCTATGTCCTTCA+AGG | 0.475974 | 1:+489031 | MsG0180000028.01.T01:CDS |
| TTAATTCAGAAGAGGGGTGG+CGG | 0.478670 | 1:-489372 | None:intergenic |
| AGATTGGCCAAATTCCCAAT+TGG | 0.482710 | 1:-489102 | None:intergenic |
| TCTAACCTTTGGAATAAGAC+AGG | 0.485412 | 1:-488114 | None:intergenic |
| CTAGCTGTACCGCAAGAGTT+GGG | 0.498738 | 1:+489569 | MsG0180000028.01.T01:three_prime_UTR |
| TAATTCAGAAGAGGGGTGGC+GGG | 0.505460 | 1:-489371 | None:intergenic |
| ATTTGGAGGACAGAAATTTG+TGG | 0.505739 | 1:-487983 | None:intergenic |
| AATCTTATTCAACGGGGTAT+GGG | 0.517241 | 1:+487830 | MsG0180000028.01.T01:CDS |
| TCTAGCTGTACCGCAAGAGT+TGG | 0.519394 | 1:+489568 | MsG0180000028.01.T01:three_prime_UTR |
| CAATAATTTCCCAACTCTTG+CGG | 0.528463 | 1:-489578 | None:intergenic |
| TTCAAGGTCACAACTACTGA+TGG | 0.534151 | 1:+489047 | MsG0180000028.01.T01:CDS |
| AGGTTCCAAAACTGATTGGA+TGG | 0.535558 | 1:+488959 | MsG0180000028.01.T01:CDS |
| TTTATGGAAATCTTATTCAA+CGG | 0.540683 | 1:+487822 | MsG0180000028.01.T01:CDS |
| TTTGGAAGATCAAAATTTGG+AGG | 0.549026 | 1:-487997 | None:intergenic |
| TTAGGTTCAGTGTGAATGGA+AGG | 0.549239 | 1:+488868 | MsG0180000028.01.T01:CDS |
| AGTGATGCAGAAGGCACTAT+GGG | 0.562895 | 1:+487540 | MsG0180000028.01.T01:CDS |
| ATTATAAGACAGACCCAAGA+TGG | 0.565868 | 1:+487929 | MsG0180000028.01.T01:CDS |
| TGGCCAAATTCCCAATTGGA+AGG | 0.568133 | 1:-489098 | None:intergenic |
| TCGTCCCTGTCTTATTCCAA+AGG | 0.569211 | 1:+488109 | MsG0180000028.01.T01:CDS |
| TATCAAAATGCTTTAGAGGT+GGG | 0.577409 | 1:-488041 | None:intergenic |
| TGGTTGAGCAATCATCAAAA+CGG | 0.582808 | 1:+489316 | MsG0180000028.01.T01:three_prime_UTR |
| GTGTTGATCAGCAATCTGGC+TGG | 0.582992 | 1:+488906 | MsG0180000028.01.T01:CDS |
| ATGCCTTCAAAGCTTCTGGA+TGG | 0.586668 | 1:+487488 | MsG0180000028.01.T01:CDS |
| TTTGATCTTCCAAACGACGA+TGG | 0.587589 | 1:+488006 | MsG0180000028.01.T01:CDS |
| TTCCAAACGACGATGGAGGA+TGG | 0.589231 | 1:+488013 | MsG0180000028.01.T01:CDS |
| AAGATTGGAATCTACAGAGG+AGG | 0.589893 | 1:+488084 | MsG0180000028.01.T01:CDS |
| TTTAATGATGGAGCTTCATG+TGG | 0.590206 | 1:+487883 | MsG0180000028.01.T01:CDS |
| AGCAATCATCAAAACGGCTG+AGG | 0.596427 | 1:+489322 | MsG0180000028.01.T01:three_prime_UTR |
| ATATGGCTTAATTCAGAAGA+GGG | 0.597633 | 1:-489379 | None:intergenic |
| CATATGGCTTAATTCAGAAG+AGG | 0.598963 | 1:-489380 | None:intergenic |
| CTAACCTTTGGAATAAGACA+GGG | 0.602543 | 1:-488113 | None:intergenic |
| ATATCAAAATGCTTTAGAGG+TGG | 0.603348 | 1:-488042 | None:intergenic |
| TTATGGGGTAGTGATGCAGA+AGG | 0.604897 | 1:+487531 | MsG0180000028.01.T01:CDS |
| GATCTTCCAAACGACGATGG+AGG | 0.615762 | 1:+488009 | MsG0180000028.01.T01:CDS |
| GGCTTAATTCAGAAGAGGGG+TGG | 0.620291 | 1:-489375 | None:intergenic |
| AGATTGGAATCTACAGAGGA+GGG | 0.626103 | 1:+488085 | MsG0180000028.01.T01:CDS |
| TAAAATGTCGCATATTTAGA+CGG | 0.628348 | 1:+489293 | MsG0180000028.01.T01:three_prime_UTR |
| TCCAGAAGCTTTGAAGGCAT+AGG | 0.644558 | 1:-487485 | None:intergenic |
| TAGGTTCAGTGTGAATGGAA+GGG | 0.653972 | 1:+488869 | MsG0180000028.01.T01:CDS |
| GAAAAGATTGGAATCTACAG+AGG | 0.666370 | 1:+488081 | MsG0180000028.01.T01:CDS |
| AATGTCGCATATTTAGACGG+TGG | 0.687704 | 1:+489296 | MsG0180000028.01.T01:three_prime_UTR |
| ATGGCTATGTCAAGAAATTG+GGG | 0.694107 | 1:+488978 | MsG0180000028.01.T01:CDS |
| TATGGCTTAATTCAGAAGAG+GGG | 0.712624 | 1:-489378 | None:intergenic |
| TGTGTGATGCAGGAGGCTTG+TGG | 0.731910 | 1:+487799 | MsG0180000028.01.T01:intron |
| TTAATGATGGAGCTTCATGT+GGG | 0.742051 | 1:+487884 | MsG0180000028.01.T01:CDS |
| TATGGAAATCTTATTCAACG+GGG | 0.744471 | 1:+487824 | MsG0180000028.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAACACAGTTTAAAAATT+GGG | - | Chr1:488641-488660 | None:intergenic | 15.0% |
| !! | TATATTCATTAATCATCAAA+TGG | - | Chr1:488352-488371 | None:intergenic | 15.0% |
| !!! | CTATATAAATTTAAAGTCTT+AGG | - | Chr1:489608-489627 | None:intergenic | 15.0% |
| !!! | TTTATACACAAATTATGTTT+TGG | + | Chr1:488457-488476 | MsG0180000028.01.T01:intron | 15.0% |
| !! | AGAAATAAAATGTTGAAAAG+TGG | - | Chr1:487581-487600 | None:intergenic | 20.0% |
| !! | ATACAATACAAAATGGAATT+TGG | - | Chr1:487359-487378 | None:intergenic | 20.0% |
| !! | ATTGGGTTAATTATGTTTAA+TGG | - | Chr1:488624-488643 | None:intergenic | 20.0% |
| !! | GATTAACACAGTTTAAAAAT+TGG | - | Chr1:488642-488661 | None:intergenic | 20.0% |
| !! | TTTATGGAAATCTTATTCAA+CGG | + | Chr1:487822-487841 | MsG0180000028.01.T01:CDS | 20.0% |
| !!! | AGTTAGTTGAATATTGTTTT+AGG | + | Chr1:487723-487742 | MsG0180000028.01.T01:intron | 20.0% |
| !!! | ATAGTATTTTTATTTTGAGC+AGG | - | Chr1:489256-489275 | None:intergenic | 20.0% |
| !!! | ATTATTTTCACAAATTGCAT+GGG | - | Chr1:488731-488750 | None:intergenic | 20.0% |
| !!! | ATTTAATCACTTTAAAATCG+TGG | + | Chr1:488539-488558 | MsG0180000028.01.T01:intron | 20.0% |
| !!! | CAAATTTGAAACAATTTAGA+TGG | + | Chr1:488294-488313 | MsG0180000028.01.T01:intron | 20.0% |
| !!! | CATGAATTGTTATTCTTATT+TGG | + | Chr1:489408-489427 | MsG0180000028.01.T01:three_prime_UTR | 20.0% |
| !!! | GTTAAAGCATTTTAAATATG+TGG | + | Chr1:488316-488335 | MsG0180000028.01.T01:intron | 20.0% |
| !!! | TAGTATTTTTATTTTGAGCA+GGG | - | Chr1:489255-489274 | None:intergenic | 20.0% |
| ! | CAATCTAATGCTTATTTGAA+TGG | + | Chr1:489011-489030 | MsG0180000028.01.T01:CDS | 25.0% |
| ! | GGTTAATTATGTTTAATGGA+TGG | - | Chr1:488620-488639 | None:intergenic | 25.0% |
| ! | TAAAATGTCGCATATTTAGA+CGG | + | Chr1:489293-489312 | MsG0180000028.01.T01:three_prime_UTR | 25.0% |
| ! | TAAGATCAATGACATGTTAT+TGG | + | Chr1:488235-488254 | MsG0180000028.01.T01:intron | 25.0% |
| ! | TAGAAGGATACAATACAAAA+TGG | - | Chr1:487366-487385 | None:intergenic | 25.0% |
| ! | TGTTCAGTAATTTAGTAGTT+AGG | + | Chr1:488780-488799 | MsG0180000028.01.T01:intron | 25.0% |
| ! | TTATGGAAATCTTATTCAAC+GGG | + | Chr1:487823-487842 | MsG0180000028.01.T01:CDS | 25.0% |
| !! | CTAAATATGCGACATTTTAT+CGG | - | Chr1:489292-489311 | None:intergenic | 25.0% |
| !! | GATTATTTTCACAAATTGCA+TGG | - | Chr1:488732-488751 | None:intergenic | 25.0% |
| !! | TGACCAAAGTATGTTTATTT+TGG | + | Chr1:487426-487445 | MsG0180000028.01.T01:exon | 25.0% |
| !!! | AACCCTTATGATTACTTTTT+GGG | - | Chr1:489158-489177 | None:intergenic | 25.0% |
| !!! | AGTATTTTTATTTTGAGCAG+GGG | - | Chr1:489254-489273 | None:intergenic | 25.0% |
| !!! | GACCAAAGTATGTTTATTTT+GGG | + | Chr1:487427-487446 | MsG0180000028.01.T01:exon | 25.0% |
| !!! | TACTATTGTTCTAGCTTTTT+TGG | + | Chr1:489522-489541 | MsG0180000028.01.T01:three_prime_UTR | 25.0% |
| !!! | TGTTTTTATATTTTTGGGCA+GGG | + | Chr1:488821-488840 | MsG0180000028.01.T01:intron | 25.0% |
| !!! | TTATTGCACTTTTTTATGAG+AGG | - | Chr1:488200-488219 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATATTTTTGGGC+AGG | + | Chr1:488820-488839 | MsG0180000028.01.T01:intron | 25.0% |
| AAAACATTGTTCCTTCCAAT+TGG | + | Chr1:489087-489106 | MsG0180000028.01.T01:CDS | 30.0% | |
| AAACATTGTTCCTTCCAATT+GGG | + | Chr1:489088-489107 | MsG0180000028.01.T01:CDS | 30.0% | |
| AACCTTTAATGGAAACAGAT+TGG | - | Chr1:488944-488963 | None:intergenic | 30.0% | |
| ATAAAAAGTTGCATGAGCAT+TGG | - | Chr1:487515-487534 | None:intergenic | 30.0% | |
| ATACTTGAAAATCGTCGTTA+AGG | - | Chr1:488434-488453 | None:intergenic | 30.0% | |
| ATATGGCTTAATTCAGAAGA+GGG | - | Chr1:489382-489401 | None:intergenic | 30.0% | |
| ATCCAATCTGTTTCCATTAA+AGG | + | Chr1:488939-488958 | MsG0180000028.01.T01:CDS | 30.0% | |
| CAGATCAAAATTCTAACCTT+TGG | - | Chr1:488128-488147 | None:intergenic | 30.0% | |
| GTATTGTATCCTTCTACATT+GGG | + | Chr1:487370-487389 | MsG0180000028.01.T01:five_prime_UTR | 30.0% | |
| TACTTGAAAATCGTCGTTAA+GGG | - | Chr1:488433-488452 | None:intergenic | 30.0% | |
| TATGGAAATCTTATTCAACG+GGG | + | Chr1:487824-487843 | MsG0180000028.01.T01:CDS | 30.0% | |
| TCGTTTGGAAGATCAAAATT+TGG | - | Chr1:488003-488022 | None:intergenic | 30.0% | |
| TGCCCAAAATAAACATACTT+TGG | - | Chr1:487432-487451 | None:intergenic | 30.0% | |
| TGTATTGTATCCTTCTACAT+TGG | + | Chr1:487369-487388 | MsG0180000028.01.T01:five_prime_UTR | 30.0% | |
| TGTGGTTAATTGTTATGAGT+GGG | - | Chr1:488400-488419 | None:intergenic | 30.0% | |
| TTAAAGGTTCCAAAACTGAT+TGG | + | Chr1:488955-488974 | MsG0180000028.01.T01:CDS | 30.0% | |
| TTGTGGTTAATTGTTATGAG+TGG | - | Chr1:488401-488420 | None:intergenic | 30.0% | |
| TTTGGAAGATCAAAATTTGG+AGG | - | Chr1:488000-488019 | None:intergenic | 30.0% | |
| ! | AATGCTCATGCAACTTTTTA+TGG | + | Chr1:487514-487533 | MsG0180000028.01.T01:CDS | 30.0% |
| ! | AATTGGAAGGAACAATGTTT+TGG | - | Chr1:489088-489107 | None:intergenic | 30.0% |
| ! | ATGCTCATGCAACTTTTTAT+GGG | + | Chr1:487515-487534 | MsG0180000028.01.T01:CDS | 30.0% |
| !! | ACATGTTATTGGTAGTTTTG+AGG | + | Chr1:488246-488265 | MsG0180000028.01.T01:intron | 30.0% |
| !! | AGTACTGCTTTGTTTAATGA+TGG | + | Chr1:487871-487890 | MsG0180000028.01.T01:CDS | 30.0% |
| !! | ATATCAAAATGCTTTAGAGG+TGG | - | Chr1:488045-488064 | None:intergenic | 30.0% |
| !! | CATAAGGGTTCTAAAGTTAT+GGG | + | Chr1:489168-489187 | MsG0180000028.01.T01:three_prime_UTR | 30.0% |
| !! | GAACCCTTATGATTACTTTT+TGG | - | Chr1:489159-489178 | None:intergenic | 30.0% |
| !! | GTTAAGGGTGTTTAAAATTG+TGG | - | Chr1:488418-488437 | None:intergenic | 30.0% |
| !! | TATCAAAATGCTTTAGAGGT+GGG | - | Chr1:488044-488063 | None:intergenic | 30.0% |
| !! | TCATAAGGGTTCTAAAGTTA+TGG | + | Chr1:489167-489186 | MsG0180000028.01.T01:three_prime_UTR | 30.0% |
| !!! | AACAATGTTTTGGAAAGTTC+TGG | - | Chr1:489078-489097 | None:intergenic | 30.0% |
| !!! | ACCCTTATGATTACTTTTTG+GGG | - | Chr1:489157-489176 | None:intergenic | 30.0% |
| !!! | ACCTCTAAAGCATTTTGATA+TGG | + | Chr1:488044-488063 | MsG0180000028.01.T01:CDS | 30.0% |
| !!! | ATCAGTTTTGGAACCTTTAA+TGG | - | Chr1:488955-488974 | None:intergenic | 30.0% |
| !!! | ATGGGTTTTGGGTTTAATTT+TGG | + | Chr1:489186-489205 | MsG0180000028.01.T01:three_prime_UTR | 30.0% |
| !!! | CATGTTATTGGTAGTTTTGA+GGG | + | Chr1:488247-488266 | MsG0180000028.01.T01:intron | 30.0% |
| !!! | GGCATGCTTTTTTATTTTAC+TGG | + | Chr1:489343-489362 | MsG0180000028.01.T01:three_prime_UTR | 30.0% |
| !!! | GTTCTAAAGTTATGGGTTTT+GGG | + | Chr1:489175-489194 | MsG0180000028.01.T01:three_prime_UTR | 30.0% |
| !!! | TCTAGCTTTTTTGGATTTCT+TGG | + | Chr1:489531-489550 | MsG0180000028.01.T01:three_prime_UTR | 30.0% |
| AAATCTTATTCAACGGGGTA+TGG | + | Chr1:487829-487848 | MsG0180000028.01.T01:CDS | 35.0% | |
| AACAATTCATGCAAGCCATA+TGG | - | Chr1:489399-489418 | None:intergenic | 35.0% | |
| AATCTTATTCAACGGGGTAT+GGG | + | Chr1:487830-487849 | MsG0180000028.01.T01:CDS | 35.0% | |
| ACAGAAATTTGTGGCTGTTA+TGG | - | Chr1:487977-487996 | None:intergenic | 35.0% | |
| ACCCCCAAAAAGTAATCATA+AGG | + | Chr1:489152-489171 | MsG0180000028.01.T01:three_prime_UTR | 35.0% | |
| ATGGCTATGTCAAGAAATTG+GGG | + | Chr1:488978-488997 | MsG0180000028.01.T01:CDS | 35.0% | |
| ATTATAAGACAGACCCAAGA+TGG | + | Chr1:487929-487948 | MsG0180000028.01.T01:CDS | 35.0% | |
| ATTTGGAGGACAGAAATTTG+TGG | - | Chr1:487986-488005 | None:intergenic | 35.0% | |
| CAATAATTTCCCAACTCTTG+CGG | - | Chr1:489581-489600 | None:intergenic | 35.0% | |
| CATATGGCTTAATTCAGAAG+AGG | - | Chr1:489383-489402 | None:intergenic | 35.0% | |
| CATTTGAATATGTGTGATGC+AGG | + | Chr1:487789-487808 | MsG0180000028.01.T01:intron | 35.0% | |
| CCCCCAAAAAGTAATCATAA+GGG | + | Chr1:489153-489172 | MsG0180000028.01.T01:three_prime_UTR | 35.0% | |
| CTCTTCTGAATTAAGCCATA+TGG | + | Chr1:489381-489400 | MsG0180000028.01.T01:three_prime_UTR | 35.0% | |
| GAAAAGATTGGAATCTACAG+AGG | + | Chr1:488081-488100 | MsG0180000028.01.T01:CDS | 35.0% | |
| GATGGCTATGTCAAGAAATT+GGG | + | Chr1:488977-488996 | MsG0180000028.01.T01:CDS | 35.0% | |
| GCCATATCAAAATGCTTTAG+AGG | - | Chr1:488048-488067 | None:intergenic | 35.0% | |
| TATGGCTTAATTCAGAAGAG+GGG | - | Chr1:489381-489400 | None:intergenic | 35.0% | |
| TCTGTGCTACATCTTATCTT+AGG | + | Chr1:488144-488163 | MsG0180000028.01.T01:intron | 35.0% | |
| TGGTTGAGCAATCATCAAAA+CGG | + | Chr1:489316-489335 | MsG0180000028.01.T01:three_prime_UTR | 35.0% | |
| ! | ATCCTTCTACATTGGGTTTT+AGG | + | Chr1:487377-487396 | MsG0180000028.01.T01:five_prime_UTR | 35.0% |
| ! | TGCTCATGCAACTTTTTATG+GGG | + | Chr1:487516-487535 | MsG0180000028.01.T01:CDS | 35.0% |
| ! | TTAATGATGGAGCTTCATGT+GGG | + | Chr1:487884-487903 | MsG0180000028.01.T01:CDS | 35.0% |
| ! | TTCCTTTTATGCACCATCTT+GGG | - | Chr1:487945-487964 | None:intergenic | 35.0% |
| ! | TTTAATGATGGAGCTTCATG+TGG | + | Chr1:487883-487902 | MsG0180000028.01.T01:CDS | 35.0% |
| !! | CTAACCTTTGGAATAAGACA+GGG | - | Chr1:488116-488135 | None:intergenic | 35.0% |
| !! | TCTAACCTTTGGAATAAGAC+AGG | - | Chr1:488117-488136 | None:intergenic | 35.0% |
| !! | TTTTGGGGGTTATTTAGAAC+TGG | - | Chr1:489142-489161 | None:intergenic | 35.0% |
| !!! | CCCTTATGATTACTTTTTGG+GGG | - | Chr1:489156-489175 | None:intergenic | 35.0% |
| !!! | GCTTTTTTGGATTTCTTGGA+AGG | + | Chr1:489535-489554 | MsG0180000028.01.T01:three_prime_UTR | 35.0% |
| !!! | GGTTCTAAAGTTATGGGTTT+TGG | + | Chr1:489174-489193 | MsG0180000028.01.T01:three_prime_UTR | 35.0% |
| !!! | TTTATTTTGGGCACACTCAT+TGG | + | Chr1:487439-487458 | MsG0180000028.01.T01:CDS | 35.0% |
| AAGATTGGAATCTACAGAGG+AGG | + | Chr1:488084-488103 | MsG0180000028.01.T01:CDS | 40.0% | |
| AATGTCGCATATTTAGACGG+TGG | + | Chr1:489296-489315 | MsG0180000028.01.T01:three_prime_UTR | 40.0% | |
| AGATTGGAATCTACAGAGGA+GGG | + | Chr1:488085-488104 | MsG0180000028.01.T01:CDS | 40.0% | |
| AGGTTCCAAAACTGATTGGA+TGG | + | Chr1:488959-488978 | MsG0180000028.01.T01:CDS | 40.0% | |
| ATCAGTAGTTGTGACCTTGA+AGG | - | Chr1:489048-489067 | None:intergenic | 40.0% | |
| CAAGAAATTGGGGTGCAAAT+TGG | + | Chr1:488988-489007 | MsG0180000028.01.T01:CDS | 40.0% | |
| GGATCTTGCTAGAGAAAGAT+TGG | - | Chr1:489121-489140 | None:intergenic | 40.0% | |
| GGATGGCTATGTCAAGAAAT+TGG | + | Chr1:488976-488995 | MsG0180000028.01.T01:CDS | 40.0% | |
| GGTTAATTGTTATGAGTGGG+TGG | - | Chr1:488397-488416 | None:intergenic | 40.0% | |
| GTTCCTTCCAATTGGGAATT+TGG | + | Chr1:489095-489114 | MsG0180000028.01.T01:CDS | 40.0% | |
| GTTGAAAAGTGGTGTGACAA+GGG | - | Chr1:487570-487589 | None:intergenic | 40.0% | |
| TAGGTTCAGTGTGAATGGAA+GGG | + | Chr1:488869-488888 | MsG0180000028.01.T01:CDS | 40.0% | |
| TGCCTAAAACCCAATGTAGA+AGG | - | Chr1:487382-487401 | None:intergenic | 40.0% | |
| TGGTCAATCTATGTCCTTCA+AGG | + | Chr1:489031-489050 | MsG0180000028.01.T01:CDS | 40.0% | |
| TGTTGAAAAGTGGTGTGACA+AGG | - | Chr1:487571-487590 | None:intergenic | 40.0% | |
| TTAGGTTCAGTGTGAATGGA+AGG | + | Chr1:488868-488887 | MsG0180000028.01.T01:CDS | 40.0% | |
| TTCAAGGTCACAACTACTGA+TGG | + | Chr1:489047-489066 | MsG0180000028.01.T01:CDS | 40.0% | |
| TTGAATATGTGTGATGCAGG+AGG | + | Chr1:487792-487811 | MsG0180000028.01.T01:intron | 40.0% | |
| TTTGATCTTCCAAACGACGA+TGG | + | Chr1:488006-488025 | MsG0180000028.01.T01:CDS | 40.0% | |
| ! | AGATTGGCCAAATTCCCAAT+TGG | - | Chr1:489105-489124 | None:intergenic | 40.0% |
| ! | ATTCCAATCTTTTCCCAAGC+AGG | - | Chr1:488075-488094 | None:intergenic | 40.0% |
| ! | CATAGCCATCCAATCAGTTT+TGG | - | Chr1:488967-488986 | None:intergenic | 40.0% |
| ! | CTTCCTTTTATGCACCATCT+TGG | - | Chr1:487946-487965 | None:intergenic | 40.0% |
| !! | GTTAGTGTTGATCAGCAATC+TGG | + | Chr1:488902-488921 | MsG0180000028.01.T01:CDS | 40.0% |
| AGCAATCATCAAAACGGCTG+AGG | + | Chr1:489322-489341 | MsG0180000028.01.T01:three_prime_UTR | 45.0% | |
| AGGGTTCCTTGCAAAAAGCA+TGG | + | Chr1:488840-488859 | MsG0180000028.01.T01:intron | 45.0% | |
| ATGCCTTCAAAGCTTCTGGA+TGG | + | Chr1:487488-487507 | MsG0180000028.01.T01:CDS | 45.0% | |
| CAACCTGCTTGGGAAAAGAT+TGG | + | Chr1:488069-488088 | MsG0180000028.01.T01:CDS | 45.0% | |
| GACCCAAGATGGTGCATAAA+AGG | + | Chr1:487940-487959 | MsG0180000028.01.T01:CDS | 45.0% | |
| GGAGTTAGGTTCAGTGTGAA+TGG | + | Chr1:488864-488883 | MsG0180000028.01.T01:CDS | 45.0% | |
| TCCTATGCCTTCAAAGCTTC+TGG | + | Chr1:487484-487503 | MsG0180000028.01.T01:CDS | 45.0% | |
| TGATATGGCACAACCTGCTT+GGG | + | Chr1:488059-488078 | MsG0180000028.01.T01:CDS | 45.0% | |
| TGGCCAAATTCCCAATTGGA+AGG | - | Chr1:489101-489120 | None:intergenic | 45.0% | |
| TTAATTCAGAAGAGGGGTGG+CGG | - | Chr1:489375-489394 | None:intergenic | 45.0% | |
| TTATGGGGTAGTGATGCAGA+AGG | + | Chr1:487531-487550 | MsG0180000028.01.T01:CDS | 45.0% | |
| TTGATATGGCACAACCTGCT+TGG | + | Chr1:488058-488077 | MsG0180000028.01.T01:CDS | 45.0% | |
| ! | GCAAAAAGCATGGAGGAGTT+AGG | + | Chr1:488850-488869 | MsG0180000028.01.T01:CDS | 45.0% |
| ! | GTTCCTTGCAAAAAGCATGG+AGG | + | Chr1:488843-488862 | MsG0180000028.01.T01:CDS | 45.0% |
| ! | TCGTCCCTGTCTTATTCCAA+AGG | + | Chr1:488109-488128 | MsG0180000028.01.T01:CDS | 45.0% |
| ! | TGCGACATTTTATCGGAAGC+AGG | - | Chr1:489285-489304 | None:intergenic | 45.0% |
| !! | ACTCCTCCATGCTTTTTGCA+AGG | - | Chr1:488849-488868 | None:intergenic | 45.0% |
| !! | AGTGATGCAGAAGGCACTAT+GGG | + | Chr1:487540-487559 | MsG0180000028.01.T01:CDS | 45.0% |
| !! | TAGTGATGCAGAAGGCACTA+TGG | + | Chr1:487539-487558 | MsG0180000028.01.T01:CDS | 45.0% |
| !! | TCCAGAAGCTTTGAAGGCAT+AGG | - | Chr1:487488-487507 | None:intergenic | 45.0% |
| !!! | AAAATTGTTTTTATATTTTT+GGG | + | Chr1:488816-488835 | MsG0180000028.01.T01:intron | 5.0% |
| !!! | TAAAATTGTTTTTATATTTT+TGG | + | Chr1:488815-488834 | MsG0180000028.01.T01:intron | 5.0% |
| CTAGCTGTACCGCAAGAGTT+GGG | + | Chr1:489569-489588 | MsG0180000028.01.T01:three_prime_UTR | 50.0% | |
| GATCTTCCAAACGACGATGG+AGG | + | Chr1:488009-488028 | MsG0180000028.01.T01:CDS | 50.0% | |
| GGCTTAATTCAGAAGAGGGG+TGG | - | Chr1:489378-489397 | None:intergenic | 50.0% | |
| TAATTCAGAAGAGGGGTGGC+GGG | - | Chr1:489374-489393 | None:intergenic | 50.0% | |
| TCTAGCTGTACCGCAAGAGT+TGG | + | Chr1:489568-489587 | MsG0180000028.01.T01:three_prime_UTR | 50.0% | |
| TGCAGGAGGCTTGTGGTTTA+TGG | + | Chr1:487806-487825 | MsG0180000028.01.T01:intron | 50.0% | |
| TTCCAAACGACGATGGAGGA+TGG | + | Chr1:488013-488032 | MsG0180000028.01.T01:CDS | 50.0% | |
| ! | GGTCCATCCAGAAGCTTTGA+AGG | - | Chr1:487494-487513 | None:intergenic | 50.0% |
| ! | GTGTTGATCAGCAATCTGGC+TGG | + | Chr1:488906-488925 | MsG0180000028.01.T01:CDS | 50.0% |
| ATCAGCAATCTGGCTGGTGC+TGG | + | Chr1:488912-488931 | MsG0180000028.01.T01:CDS | 55.0% | |
| CACCATCCTCCATCGTCGTT+TGG | - | Chr1:488018-488037 | None:intergenic | 55.0% | |
| TGTGTGATGCAGGAGGCTTG+TGG | + | Chr1:487799-487818 | MsG0180000028.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 487332 | 489663 | 487332 | ID=MsG0180000028.01;Name=MsG0180000028.01 |
| Chr1 | mRNA | 487332 | 489663 | 487332 | ID=MsG0180000028.01.T01;Parent=MsG0180000028.01;Name=MsG0180000028.01.T01;_AED=0.43;_eAED=0.43;_QI=104|1|1|1|1|1|3|515|250 |
| Chr1 | exon | 488842 | 489663 | 488842 | ID=MsG0180000028.01.T01:exon:7844;Parent=MsG0180000028.01.T01 |
| Chr1 | exon | 487811 | 488130 | 487811 | ID=MsG0180000028.01.T01:exon:7843;Parent=MsG0180000028.01.T01 |
| Chr1 | exon | 487332 | 487561 | 487332 | ID=MsG0180000028.01.T01:exon:7842;Parent=MsG0180000028.01.T01 |
| Chr1 | five_prime_UTR | 487332 | 487435 | 487332 | ID=MsG0180000028.01.T01:five_prime_utr;Parent=MsG0180000028.01.T01 |
| Chr1 | CDS | 487436 | 487561 | 487436 | ID=MsG0180000028.01.T01:cds;Parent=MsG0180000028.01.T01 |
| Chr1 | CDS | 487811 | 488130 | 487811 | ID=MsG0180000028.01.T01:cds;Parent=MsG0180000028.01.T01 |
| Chr1 | CDS | 488842 | 489148 | 488842 | ID=MsG0180000028.01.T01:cds;Parent=MsG0180000028.01.T01 |
| Chr1 | three_prime_UTR | 489149 | 489663 | 489149 | ID=MsG0180000028.01.T01:three_prime_utr;Parent=MsG0180000028.01.T01 |
| Gene Sequence |
| Protein sequence |
