AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006591.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006591.01.T01 MTR_2g011370 94.175 309 17 1 1 309 1 308 0.0 606
MsG0280006591.01.T01 MTR_2g011350 96.364 165 6 0 308 472 38 202 7.38e-113 331
MsG0280006591.01.T01 MTR_6g011240 60.323 310 118 2 1 305 1 310 1.05e-110 330
MsG0280006591.01.T01 MTR_5g037540 52.459 305 114 7 1 303 203 478 2.17e-98 304
MsG0280006591.01.T01 MTR_5g037540 45.695 151 75 3 1 146 1 149 8.74e-35 135
MsG0280006591.01.T01 MTR_5g037540 52.459 305 114 7 1 303 203 478 2.80e-98 304
MsG0280006591.01.T01 MTR_5g037540 45.695 151 75 3 1 146 1 149 1.00e-34 135
MsG0280006591.01.T01 MTR_8g061880 51.792 307 114 5 1 303 217 493 3.77e-96 301
MsG0280006591.01.T01 MTR_8g061880 50.000 150 72 3 1 148 1 149 1.14e-41 156
MsG0280006591.01.T01 MTR_8g468650 56.000 150 57 3 13 157 17 162 4.49e-51 173
MsG0280006591.01.T01 MTR_8g469980 39.500 200 88 5 66 262 718 887 4.92e-34 136
MsG0280006591.01.T01 MTR_8g469730 53.535 99 28 2 51 149 194 274 1.09e-25 107
MsG0280006591.01.T01 MTR_3g063310 35.811 148 88 3 308 451 83 227 1.57e-21 94.0
MsG0280006591.01.T01 MTR_1g057270 33.099 142 94 1 310 450 73 214 3.90e-21 92.8
MsG0280006591.01.T01 MTR_4g119428 33.083 133 88 1 310 441 71 203 1.56e-20 91.3
MsG0280006591.01.T01 MTR_7g106050 33.974 156 97 4 306 458 32 184 5.08e-20 88.6
MsG0280006591.01.T01 MTR_5g076170 32.903 155 103 1 311 464 97 251 4.15e-18 84.3
MsG0280006591.01.T01 MTR_1g057400 29.730 185 119 6 298 472 26 209 9.43e-18 82.0
MsG0280006591.01.T01 MTR_7g105870 34.694 147 90 3 308 450 57 201 2.56e-17 81.3
MsG0280006591.01.T01 MTR_7g118270 29.677 155 105 3 308 460 60 212 4.67e-17 80.5
MsG0280006591.01.T01 MTR_5g087760 30.556 144 96 2 311 450 87 230 6.26e-16 77.8
MsG0280006591.01.T01 MTR_7g106120 30.247 162 106 3 298 453 22 182 8.75e-16 76.3
MsG0280006591.01.T01 MTR_1g077560 31.902 163 107 3 313 472 87 248 1.72e-15 76.6
MsG0280006591.01.T01 MTR_3g078800 28.873 142 99 2 311 450 87 228 4.12e-15 75.9
MsG0280006591.01.T01 MTR_6g070900 28.481 158 108 3 298 450 15 172 5.76e-15 74.3
MsG0280006591.01.T01 MTR_6g071400 28.481 158 108 3 298 450 15 172 5.76e-15 74.3
MsG0280006591.01.T01 MTR_6g071410 31.959 97 66 0 298 394 15 111 8.40e-15 73.9
MsG0280006591.01.T01 MTR_6g070890 31.959 97 66 0 298 394 15 111 8.40e-15 73.9
MsG0280006591.01.T01 MTR_7g106100 31.973 147 95 3 310 453 89 233 1.55e-14 73.9
MsG0280006591.01.T01 MTR_6g471090 34.737 95 61 1 300 394 16 109 2.15e-14 72.4
MsG0280006591.01.T01 MTR_7g106000 29.891 184 116 7 298 472 47 226 3.34e-14 72.4
MsG0280006591.01.T01 MTR_1g057420 28.369 141 96 3 313 450 39 177 3.60e-14 71.6
MsG0280006591.01.T01 MTR_3g092790 27.143 140 100 2 317 455 49 187 5.90e-14 71.2
MsG0280006591.01.T01 MTR_2g012550 26.708 161 113 3 313 469 99 258 8.13e-14 72.0
MsG0280006591.01.T01 MTR_2g086790 24.713 174 116 4 302 462 27 198 1.47e-13 70.5
MsG0280006591.01.T01 MTR_2g087000 28.873 142 100 1 309 450 65 205 2.15e-13 70.1
MsG0280006591.01.T01 MTR_3g078820 26.429 140 101 2 313 451 45 183 4.95e-13 68.6
MsG0280006591.01.T01 MTR_2g100060 24.405 168 119 3 313 472 84 251 1.11e-11 65.5
MsG0280006591.01.T01 MTR_8g469800 44.615 65 35 1 222 285 25 89 1.62e-11 63.9
MsG0280006591.01.T01 MTR_7g106010 28.571 147 99 3 309 450 54 199 4.82e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006591.01.T01 AT3G28630 54.902 306 124 3 1 305 33 325 3.47e-104 314
MsG0280006591.01.T01 AT3G28630 53.268 306 115 3 1 305 33 311 5.23e-100 303
MsG0280006591.01.T01 AT1G59710 52.288 306 127 3 1 304 1 289 8.08e-100 303
MsG0280006591.01.T01 AT1G59710 52.288 306 127 3 1 304 1 289 1.40e-99 301
MsG0280006591.01.T01 AT3G01311 47.022 319 122 7 1 316 1 275 1.63e-91 280
MsG0280006591.01.T01 AT3G01311 47.386 306 117 5 1 305 1 263 1.95e-91 279
MsG0280006591.01.T01 AT1G27100 49.186 307 136 4 1 305 227 515 3.35e-87 276
MsG0280006591.01.T01 AT1G27100 54.795 146 63 2 1 143 1 146 1.83e-45 166
MsG0280006591.01.T01 AT1G69890 46.254 307 133 6 1 305 1 277 4.76e-82 255
MsG0280006591.01.T01 AT1G59710 70.199 151 44 1 1 150 1 151 3.84e-72 227
MsG0280006591.01.T01 AT5G22870 46.626 163 87 0 310 472 45 207 3.85e-49 167
MsG0280006591.01.T01 AT1G69900 57.143 140 55 4 1 135 241 380 1.53e-42 155
MsG0280006591.01.T01 AT1G69900 48.000 150 75 3 1 147 1 150 6.83e-35 134
MsG0280006591.01.T01 AT1G08160 35.758 165 103 2 311 472 57 221 7.45e-32 122
MsG0280006591.01.T01 AT5G06320 32.787 183 117 4 295 472 50 231 1.13e-25 105
MsG0280006591.01.T01 AT2G35980 33.951 162 100 3 296 450 38 199 6.13e-24 100
MsG0280006591.01.T01 AT3G11650 29.891 184 122 3 295 472 57 239 3.59e-23 98.6
MsG0280006591.01.T01 AT3G52470 34.615 156 97 3 302 454 27 180 8.74e-21 90.9
MsG0280006591.01.T01 AT2G35460 30.636 173 116 4 295 465 56 226 3.07e-19 87.0
MsG0280006591.01.T01 AT4G09590 30.675 163 110 2 302 462 30 191 5.97e-19 85.9
MsG0280006591.01.T01 AT2G35960 32.667 150 96 3 308 454 35 182 1.11e-18 85.1
MsG0280006591.01.T01 AT5G53730 29.412 153 105 3 306 455 39 191 1.56e-18 84.7
MsG0280006591.01.T01 AT3G11660 30.519 154 103 3 308 458 32 184 4.07e-18 83.2
MsG0280006591.01.T01 AT3G44220 28.767 146 103 1 306 450 32 177 5.06e-18 82.8
MsG0280006591.01.T01 AT2G27080 27.922 154 110 1 298 450 82 235 1.17e-17 83.2
MsG0280006591.01.T01 AT2G27080 27.922 154 110 1 298 450 82 235 1.17e-17 83.2
MsG0280006591.01.T01 AT2G35970 30.061 163 111 2 302 462 30 191 1.12e-16 79.3
MsG0280006591.01.T01 AT5G06330 30.719 153 102 3 313 462 39 190 2.77e-16 77.8
MsG0280006591.01.T01 AT5G22200 28.058 139 99 1 313 450 43 181 1.15e-15 76.3
MsG0280006591.01.T01 AT1G65690 29.032 155 109 1 298 451 73 227 2.37e-15 76.3
MsG0280006591.01.T01 AT5G36970 30.556 144 99 1 309 451 80 223 5.78e-14 72.0
MsG0280006591.01.T01 AT4G01410 28.169 142 101 1 310 450 60 201 1.85e-13 70.1
MsG0280006591.01.T01 AT1G54540 30.405 148 99 3 313 458 76 221 8.12e-13 68.6
MsG0280006591.01.T01 AT5G21130 26.708 161 117 1 313 472 118 278 1.01e-12 68.9
MsG0280006591.01.T01 AT1G61760 28.169 142 100 2 310 450 60 200 5.15e-12 65.9
MsG0280006591.01.T01 AT4G05220 27.211 147 103 3 310 454 62 206 6.72e-12 65.5
MsG0280006591.01.T01 AT2G27260 27.660 141 99 3 316 455 84 222 3.41e-11 63.9

Find 101 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATTGACACTTTGGAATT+TGG 0.133624 2:+3803231 None:intergenic
ATTTGATTACCTTCTCTTAT+AGG 0.163562 2:+3808081 None:intergenic
AAACGACAAATTGGGTTCTA+TGG 0.188738 2:-3807963 MsG0280006591.01.T01:CDS
CAGAGCAAGGATAAGGTTTA+AGG 0.222903 2:-3803007 MsG0280006591.01.T01:CDS
CACAAGGTTGAATTCATCTT+TGG 0.227643 2:-3808112 MsG0280006591.01.T01:CDS
CTTAAGCTTGAGAGATCTTC+TGG 0.228941 2:-3803054 MsG0280006591.01.T01:CDS
CTCTCAAGCTTAAGATCTTT+TGG 0.241960 2:+3803063 None:intergenic
ATTAGATTGAAGAGTCATTA+TGG 0.274526 2:-3808207 MsG0280006591.01.T01:CDS
GTTGCTACAACAATGCTAAA+TGG 0.293393 2:-3808260 MsG0280006591.01.T01:CDS
AAGTTGTGTGGATGAGTTAA+AGG 0.298434 2:-3806650 MsG0280006591.01.T01:CDS
TATAATGTGGGTGATGAAAA+TGG 0.299409 2:-3806718 MsG0280006591.01.T01:CDS
AAACGAAACACCGTACTCTA+AGG 0.304258 2:-3802972 MsG0280006591.01.T01:CDS
TCTAATATGCCATTCTTGTT+AGG 0.310694 2:-3808168 MsG0280006591.01.T01:CDS
ATAATCCTCCCTTCTTTCAT+TGG 0.332482 2:+3806745 None:intergenic
GAAGCAAACCTCATCTGATA+TGG 0.344373 2:+3807747 None:intergenic
TCCTCCTTCTCCTACTCTTC+CGG 0.356302 2:-3807815 MsG0280006591.01.T01:CDS
TTACATTTCAACATCACAAT+AGG 0.375265 2:+3802894 None:intergenic
CCATTCTTGTTAGGTAGAAC+GGG 0.378867 2:-3808159 MsG0280006591.01.T01:CDS
CGATTGGACAAAGAGTTATT+AGG 0.389123 2:+3807856 None:intergenic
CTGCCAACAAATATTTGTTA+TGG 0.390344 2:+3808319 None:intergenic
GATCTTGGTAAACACCTTCT+TGG 0.396167 2:+3808289 None:intergenic
CCACCATAACAAATATTTGT+TGG 0.401988 2:-3808322 MsG0280006591.01.T01:CDS
GTTGAATTCATCTTTGGAAT+GGG 0.413471 2:-3808106 MsG0280006591.01.T01:CDS
CCGGATAATGATGATCCCTT+TGG 0.420339 2:-3807796 MsG0280006591.01.T01:CDS
GTAGGAGAAGGAGGAGGAGA+AGG 0.423141 2:+3807823 None:intergenic
AAAGATGAATTCAACCTTGT+GGG 0.437656 2:+3808114 None:intergenic
GGTTGAATTCATCTTTGGAA+TGG 0.437826 2:-3808107 MsG0280006591.01.T01:CDS
TACATGCATATCAATGTTGT+TGG 0.439547 2:+3806531 None:intergenic
GTTGAACTGCATTTGTAGCT+AGG 0.443513 2:+3803166 None:intergenic
TGTTCATCAGAGCAAGGATA+AGG 0.446104 2:-3803014 MsG0280006591.01.T01:CDS
TGTAGCAACCAAGACGATCT+TGG 0.455539 2:+3808274 None:intergenic
ATCATAGTATATTGACACTT+TGG 0.456538 2:+3803224 None:intergenic
ATCAGACTTAGGACTCGTTA+TGG 0.460171 2:-3808060 MsG0280006591.01.T01:CDS
GCCATTCTTGTTAGGTAGAA+CGG 0.466212 2:-3808160 MsG0280006591.01.T01:CDS
CCAACAAATATTTGTTATGG+TGG 0.470039 2:+3808322 None:intergenic
TCATAAGTTGGCTAGTTGTA+AGG 0.471372 2:-3803362 MsG0280006591.01.T01:CDS
ATATGGAAGACGAGAACCTT+AGG 0.473203 2:+3807764 None:intergenic
CCCGTTCTACCTAACAAGAA+TGG 0.480031 2:+3808159 None:intergenic
AACGACAAATTGGGTTCTAT+GGG 0.482451 2:-3807962 MsG0280006591.01.T01:CDS
GTCAGATCTTTAACATCAAT+AGG 0.487121 2:+3807883 None:intergenic
CATCAGTTAAATTGAAGTTG+TGG 0.491299 2:+3803301 None:intergenic
GTGGCATCTTGTATTTGCTT+CGG 0.491861 2:+3807907 None:intergenic
CCAAAGGGATCATCATTATC+CGG 0.494350 2:+3807796 None:intergenic
CCTTTGGCGCAATTGACCTA+AGG 0.501547 2:-3807780 MsG0280006591.01.T01:CDS
ATTCTTTCAAAGGGCTAAAG+TGG 0.502870 2:-3808358 MsG0280006591.01.T01:CDS
GCTTAGCTGTACTCATAAGT+TGG 0.503619 2:-3803374 MsG0280006591.01.T01:intron
AAGGTAATCAAATCAGACTT+AGG 0.508591 2:-3808071 MsG0280006591.01.T01:CDS
GCAAGGATAAGGTTTAAGGT+TGG 0.511168 2:-3803003 MsG0280006591.01.T01:CDS
TTGAACTGCATTTGTAGCTA+GGG 0.511309 2:+3803167 None:intergenic
AGAAGGAGAATGAGAACGAT+TGG 0.514542 2:+3807840 None:intergenic
TGGACGGTGGAGTTTGTAGA+TGG 0.515010 2:-3808240 MsG0280006591.01.T01:CDS
TTAAGCTTGAGAGATCTTCT+GGG 0.516407 2:-3803053 MsG0280006591.01.T01:CDS
CCTTAGGTCAATTGCGCCAA+AGG 0.516886 2:+3807780 None:intergenic
GAGTGCTTACTTTCTAATGA+AGG 0.519088 2:+3806499 None:intergenic
ACATGCATATCAATGTTGTT+GGG 0.520157 2:+3806532 None:intergenic
CTCGTCTTCCATATCAGATG+AGG 0.522224 2:-3807755 MsG0280006591.01.T01:intron
GGGAATGGAATTCTTTCAAA+GGG 0.522825 2:-3808367 None:intergenic
TCTTGTATTTGCTTCGGTGG+TGG 0.526168 2:+3807913 None:intergenic
CCATGGTGGTAACCCTCCAT+TGG 0.526750 2:+3808023 None:intergenic
AGCGACTCACCAATGAAAGA+AGG 0.534649 2:-3806754 MsG0280006591.01.T01:CDS
CTATGATTCTATTGAAGTGT+CGG 0.534724 2:-3803208 MsG0280006591.01.T01:CDS
TGTATTTGCTTCGGTGGTGG+TGG 0.536798 2:+3807916 None:intergenic
TCATTATGGAAAATACTTAA+CGG 0.537954 2:-3808193 MsG0280006591.01.T01:CDS
GGTATCTTGTTCACCTGTGT+TGG 0.539217 2:-3802950 MsG0280006591.01.T01:CDS
ATCCTAGTAACATTCTTATG+TGG 0.542159 2:+3803132 None:intergenic
GAGAAATTACAAGAAGAGAC+AGG 0.542804 2:-3806628 MsG0280006591.01.T01:CDS
CAAAGATGAATTCAACCTTG+TGG 0.548469 2:+3808113 None:intergenic
GGTGTTTACCAAGATCGTCT+TGG 0.554378 2:-3808282 MsG0280006591.01.T01:CDS
AACCACATAAGAATGTTACT+AGG 0.554394 2:-3803134 MsG0280006591.01.T01:CDS
CTTAGGTCAATTGCGCCAAA+GGG 0.559321 2:+3807781 None:intergenic
GGAGGTAATTGTAGACGAAG+TGG 0.560782 2:+3806553 None:intergenic
GCATCTTGTATTTGCTTCGG+TGG 0.570114 2:+3807910 None:intergenic
TGGGAATGGAATTCTTTCAA+AGG 0.575188 2:-3808368 None:intergenic
CATTGATATGCATGTAGTTG+TGG 0.577711 2:-3806524 MsG0280006591.01.T01:CDS
GAAAATGGAGATGTTCATGA+TGG 0.580091 2:-3806703 MsG0280006591.01.T01:CDS
TGAAGTGTCGGTGCGTTACG+AGG 0.582552 2:-3803196 MsG0280006591.01.T01:CDS
AAGACTCACCGCTCAAACTG+TGG 0.584343 2:-3803103 MsG0280006591.01.T01:CDS
AACGAAACACCGTACTCTAA+GGG 0.584440 2:-3802971 MsG0280006591.01.T01:CDS
TCCGGAAGAGTAGGAGAAGG+AGG 0.590822 2:+3807814 None:intergenic
TACATTCAAAGGAAGTTGTG+TGG 0.591304 2:-3806662 MsG0280006591.01.T01:CDS
AACAAGATACCCTTAGAGTA+CGG 0.596628 2:+3802962 None:intergenic
GAATGGGAACCTATAAGAGA+AGG 0.597945 2:-3808090 MsG0280006591.01.T01:CDS
TCATCATTATCCGGAAGAGT+AGG 0.599047 2:+3807805 None:intergenic
ACGGTGGAGTTTGTAGATGG+TGG 0.600337 2:-3808237 MsG0280006591.01.T01:CDS
CCAATGGAGGGTTACCACCA+TGG 0.601273 2:-3808023 MsG0280006591.01.T01:CDS
ATCTTTAACATCAATAGGTG+TGG 0.607946 2:+3807888 None:intergenic
GCGACTCACCAATGAAAGAA+GGG 0.613508 2:-3806753 MsG0280006591.01.T01:CDS
CTACAACAATGCTAAATGGA+CGG 0.620060 2:-3808256 MsG0280006591.01.T01:CDS
TGCGTGACGGAGTTTCTCCA+TGG 0.621393 2:+3808006 None:intergenic
TTATCCGGAAGAGTAGGAGA+AGG 0.627819 2:+3807811 None:intergenic
GGAAGAGTAGGAGAAGGAGG+AGG 0.634123 2:+3807817 None:intergenic
TAGATGTGTTCATCAGAGCA+AGG 0.642918 2:-3803020 MsG0280006591.01.T01:CDS
TGCATATCAATGTTGTTGGG+AGG 0.643149 2:+3806535 None:intergenic
CATTCTTGTTAGGTAGAACG+GGG 0.653911 2:-3808158 MsG0280006591.01.T01:CDS
TTGGCAGATGATGACCAAGA+AGG 0.656165 2:-3808303 MsG0280006591.01.T01:CDS
TAAGCTTGAGAGATCTTCTG+GGG 0.656491 2:-3803052 MsG0280006591.01.T01:CDS
ATACAAAGCCACAGTTTGAG+CGG 0.660862 2:+3803095 None:intergenic
CAACAATGCTAAATGGACGG+TGG 0.698594 2:-3808253 MsG0280006591.01.T01:CDS
ATATGGGATATCATGCGTGA+CGG 0.702632 2:+3807993 None:intergenic
ACTCACCAATGAAAGAAGGG+AGG 0.709566 2:-3806750 MsG0280006591.01.T01:CDS
GTGACGGAGTTTCTCCATGG+TGG 0.710314 2:+3808009 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATCTCTAAATTAAA+AGG + Chr2:3804823-3804842 None:intergenic 10.0%
!! AATTAATCTCTAAATTAAAA+GGG + Chr2:3804822-3804841 None:intergenic 10.0%
!!! AGTAATTAATATTTTATATG+AGG + Chr2:3806367-3806386 None:intergenic 10.0%
!!! GTTTAATTTTGATTTAATTT+GGG - Chr2:3807232-3807251 MsG0280006591.01.T01:intron 10.0%
!!! TGTTTAATTTTGATTTAATT+TGG - Chr2:3807231-3807250 MsG0280006591.01.T01:intron 10.0%
!!! TTAAATTTTTAGCAAATTAA+AGG + Chr2:3803535-3803554 None:intergenic 10.0%
!! AAAAGTTAATATTCTTAAGT+CGG + Chr2:3805954-3805973 None:intergenic 15.0%
!! AAAATTACTAAATTATGTCA+TGG + Chr2:3806678-3806697 None:intergenic 15.0%
!! TATATAAACATCATTTGATT+TGG - Chr2:3807700-3807719 MsG0280006591.01.T01:intron 15.0%
!! TATTAAGGCTAAAATTATTA+TGG + Chr2:3807853-3807872 None:intergenic 15.0%
!!! AGGATTATATTTTATAATGT+GGG - Chr2:3804527-3804546 MsG0280006591.01.T01:intron 15.0%
!!! ATTTGAAGTAAAATAATCAT+GGG + Chr2:3804867-3804886 None:intergenic 15.0%
!!! TATTTTATTTTTTGTCCAAA+GGG - Chr2:3805580-3805599 MsG0280006591.01.T01:intron 15.0%
!!! TTTCTTTTTTTGTATATTTC+AGG + Chr2:3805436-3805455 None:intergenic 15.0%
!! AGAATATTATCTTGAATTGA+TGG - Chr2:3807663-3807682 MsG0280006591.01.T01:intron 20.0%
!! ATGAAAAGAAAAACAGAAAT+AGG - Chr2:3806847-3806866 MsG0280006591.01.T01:intron 20.0%
!! ATTTGAAGAGAGTAATATAA+AGG - Chr2:3805203-3805222 MsG0280006591.01.T01:intron 20.0%
!! GAAAAATTCTTTACATTCAA+AGG - Chr2:3804584-3804603 MsG0280006591.01.T01:intron 20.0%
!! GTCATAATATAAACTTCAAT+TGG - Chr2:3807004-3807023 MsG0280006591.01.T01:intron 20.0%
!! GTTAGCAAAATGTATAATTT+AGG + Chr2:3806594-3806613 None:intergenic 20.0%
!! GTTTATATTATGACCTAAAA+TGG + Chr2:3806998-3807017 None:intergenic 20.0%
!! TAAAACTTATGCATCTAAAT+TGG + Chr2:3807179-3807198 None:intergenic 20.0%
!! TACTTAAGAGTTTATTGATA+TGG - Chr2:3805320-3805339 MsG0280006591.01.T01:intron 20.0%
!! TATTGAATGAAAATTAACCA+CGG - Chr2:3805679-3805698 MsG0280006591.01.T01:intron 20.0%
!! TCATTATGGAAAATACTTAA+CGG - Chr2:3803064-3803083 MsG0280006591.01.T01:CDS 20.0%
!! TGAAAAGAAAAACAGAAATA+GGG - Chr2:3806848-3806867 MsG0280006591.01.T01:intron 20.0%
!! TTTCAACTATACTAAAACTT+GGG + Chr2:3804783-3804802 None:intergenic 20.0%
!!! AAGTTTTGTACAAACAAATA+AGG + Chr2:3805549-3805568 None:intergenic 20.0%
!!! AATATGAAAATTTAGAGCTA+AGG - Chr2:3804398-3804417 MsG0280006591.01.T01:intron 20.0%
!!! AGAGTATTTTGAGTAATTTA+AGG - Chr2:3805789-3805808 MsG0280006591.01.T01:intron 20.0%
!!! AGTTATTAGAATGTCTTTTT+TGG + Chr2:3807384-3807403 None:intergenic 20.0%
!!! ATATTTTCTTGATTAGGAAA+AGG + Chr2:3805983-3806002 None:intergenic 20.0%
!!! CATATGATATTTTCTTGATT+AGG + Chr2:3805989-3806008 None:intergenic 20.0%
!!! CATTTGAAGTAAAATAATCA+TGG + Chr2:3804868-3804887 None:intergenic 20.0%
!!! CTATTTTATTTTTTGTCCAA+AGG - Chr2:3805579-3805598 MsG0280006591.01.T01:intron 20.0%
!!! GAGGATTATATTTTATAATG+TGG - Chr2:3804526-3804545 MsG0280006591.01.T01:intron 20.0%
!!! TATTCATTTTTTCTTCATCT+TGG - Chr2:3806477-3806496 MsG0280006591.01.T01:intron 20.0%
!!! TATTTTCTTGATTAGGAAAA+GGG + Chr2:3805982-3806001 None:intergenic 20.0%
!!! TTTTCAACTATACTAAAACT+TGG + Chr2:3804784-3804803 None:intergenic 20.0%
!!! TTTTTGTATATTTCAGGTAT+AGG + Chr2:3805430-3805449 None:intergenic 20.0%
! AAAAAAGAAACTCCTGAAAA+AGG - Chr2:3805446-3805465 MsG0280006591.01.T01:intron 25.0%
! AAGTATGTAAATCCCTAATT+TGG + Chr2:3806617-3806636 None:intergenic 25.0%
! AATCATGGGAAAGATTTAAA+CGG + Chr2:3804853-3804872 None:intergenic 25.0%
! AATTAACACATTTCTTTCCA+CGG + Chr2:3803851-3803870 None:intergenic 25.0%
! AATTTACAGATGAAGAAGAA+AGG + Chr2:3806458-3806477 None:intergenic 25.0%
! ACACCAAAAAAAAAATGGAT+AGG + Chr2:3807146-3807165 None:intergenic 25.0%
! ACAGTACACCAAAAAAAAAA+TGG + Chr2:3807151-3807170 None:intergenic 25.0%
! AGTATGTAAATCCCTAATTT+GGG + Chr2:3806616-3806635 None:intergenic 25.0%
! AGTGTCCAATTAAATTGAAA+TGG + Chr2:3807439-3807458 None:intergenic 25.0%
! ATCATAGTATATTGACACTT+TGG + Chr2:3808036-3808055 None:intergenic 25.0%
! ATTAGATTGAAGAGTCATTA+TGG - Chr2:3803050-3803069 MsG0280006591.01.T01:CDS 25.0%
! ATTTGATTACCTTCTCTTAT+AGG + Chr2:3803179-3803198 None:intergenic 25.0%
! GAACATACATCTTAAAACAA+TGG - Chr2:3803734-3803753 MsG0280006591.01.T01:intron 25.0%
! GAATAAACAAAAGAAGATGA+TGG - Chr2:3804925-3804944 MsG0280006591.01.T01:intron 25.0%
! GGAAATGCAAATTATATTCA+GGG - Chr2:3804977-3804996 MsG0280006591.01.T01:intron 25.0%
! TAAGCCAACAATGATTATTA+AGG + Chr2:3807868-3807887 None:intergenic 25.0%
! TAATGATTATCTCACTTTAC+AGG - Chr2:3805883-3805902 MsG0280006591.01.T01:intron 25.0%
! TACAAACAAATAAGGAGATA+GGG + Chr2:3805541-3805560 None:intergenic 25.0%
! TCTTCCTTATGTCAAAATAT+AGG + Chr2:3805016-3805035 None:intergenic 25.0%
! TGAAAGGCTAATTCAATTAA+GGG + Chr2:3807753-3807772 None:intergenic 25.0%
! TGCAATAAGTAAAAATACAG+TGG - Chr2:3807262-3807281 MsG0280006591.01.T01:intron 25.0%
! TGGAAATGCAAATTATATTC+AGG - Chr2:3804976-3804995 MsG0280006591.01.T01:intron 25.0%
! TTACATTTCAACATCACAAT+AGG + Chr2:3808366-3808385 None:intergenic 25.0%
! TTCTTATGTGGTTGAAAAAA+CGG + Chr2:3808116-3808135 None:intergenic 25.0%
! TTGAAAGGCTAATTCAATTA+AGG + Chr2:3807754-3807773 None:intergenic 25.0%
!! ACTTAATGAGACATTCTTTT+GGG - Chr2:3804222-3804241 MsG0280006591.01.T01:intron 25.0%
!! ATGCTGACTATTAAAAAAGA+TGG - Chr2:3804133-3804152 MsG0280006591.01.T01:intron 25.0%
!! CGATTTAGATACTTTTATTG+AGG + Chr2:3806777-3806796 None:intergenic 25.0%
!! CGTAAATTACAGTCAAATTT+TGG + Chr2:3806080-3806099 None:intergenic 25.0%
!! CTTTAGCACAATAATTTTGT+TGG + Chr2:3805918-3805937 None:intergenic 25.0%
!! GATAGATTTTTGCATTCAAA+GGG + Chr2:3804685-3804704 None:intergenic 25.0%
!! GTGGTTAATTTTCATTCAAT+AGG + Chr2:3805680-3805699 None:intergenic 25.0%
!! GTTAATTTTCATTCAATAGG+TGG + Chr2:3805677-3805696 None:intergenic 25.0%
!! TTCTGATCCTTCTTTTAATA+CGG - Chr2:3806942-3806961 MsG0280006591.01.T01:intron 25.0%
!! TTTAAAGCATTTCGAGATTA+TGG + Chr2:3806012-3806031 None:intergenic 25.0%
!!! ACACTATATTGCAAGTTTTT+TGG + Chr2:3807921-3807940 None:intergenic 25.0%
!!! AGGTATAGGCTTTTTTTAAT+AGG + Chr2:3805416-3805435 None:intergenic 25.0%
!!! CAGTTAACACTTTTTTAAGT+TGG - Chr2:3805727-3805746 MsG0280006591.01.T01:intron 25.0%
!!! TAAAGCTAAGAGTTTTGAAA+GGG - Chr2:3808340-3808359 MsG0280006591.01.T01:CDS 25.0%
!!! TATATTGACACTTTGGAATT+TGG + Chr2:3808029-3808048 None:intergenic 25.0%
!!! TGAATTAGCCTTTCAAAAAA+TGG - Chr2:3807758-3807777 MsG0280006591.01.T01:CDS 25.0%
!!! TGTACCTATATTTTGACATA+AGG - Chr2:3805009-3805028 MsG0280006591.01.T01:intron 25.0%
!!! TTAGCCTTAATAATCATTGT+TGG - Chr2:3807861-3807880 MsG0280006591.01.T01:CDS 25.0%
AAAGATGAATTCAACCTTGT+GGG + Chr2:3803146-3803165 None:intergenic 30.0%
AAATGGCTAGGAAAAAGTAA+TGG + Chr2:3807422-3807441 None:intergenic 30.0%
AACCACATAAGAATGTTACT+AGG - Chr2:3808123-3808142 MsG0280006591.01.T01:CDS 30.0%
AAGAAAAAGAATGCATAGGA+GGG - Chr2:3805032-3805051 MsG0280006591.01.T01:intron 30.0%
AAGGAAGAAAAAGAATGCAT+AGG - Chr2:3805028-3805047 MsG0280006591.01.T01:intron 30.0%
AAGGATCAGAACCAATAAAA+AGG + Chr2:3806933-3806952 None:intergenic 30.0%
AAGGTAATCAAATCAGACTT+AGG - Chr2:3803186-3803205 MsG0280006591.01.T01:CDS 30.0%
AATTCGAAAAATCTTACCCA+CGG + Chr2:3805624-3805643 None:intergenic 30.0%
ACAAACAAATAAGGAGATAG+GGG + Chr2:3805540-3805559 None:intergenic 30.0%
ACATGCATATCAATGTTGTT+GGG + Chr2:3804728-3804747 None:intergenic 30.0%
ATCCTAGTAACATTCTTATG+TGG + Chr2:3808128-3808147 None:intergenic 30.0%
ATCGTACAAAAACGACAAAT+TGG - Chr2:3803285-3803304 MsG0280006591.01.T01:CDS 30.0%
ATCTTTAACATCAATAGGTG+TGG + Chr2:3803372-3803391 None:intergenic 30.0%
ATGCGTCGCAATTAAAAATT+GGG - Chr2:3803602-3803621 MsG0280006591.01.T01:intron 30.0%
CAAAAGAATGTCTCATTAAG+TGG + Chr2:3804223-3804242 None:intergenic 30.0%
CATCAGTTAAATTGAAGTTG+TGG + Chr2:3807959-3807978 None:intergenic 30.0%
CCAATTAAATTGAAATGGCT+AGG + Chr2:3807434-3807453 None:intergenic 30.0%
CCACCATAACAAATATTTGT+TGG - Chr2:3802935-3802954 MsG0280006591.01.T01:CDS 30.0%
CCTAGCCATTTCAATTTAAT+TGG - Chr2:3807431-3807450 MsG0280006591.01.T01:intron 30.0%
CTATGATTCTATTGAAGTGT+CGG - Chr2:3808049-3808068 MsG0280006591.01.T01:CDS 30.0%
GACAATAGAGAAGATGAAAT+TGG - Chr2:3807119-3807138 MsG0280006591.01.T01:intron 30.0%
GTACAAACAAATAAGGAGAT+AGG + Chr2:3805542-3805561 None:intergenic 30.0%
GTATCTAAATCGAAATCCTA+AGG - Chr2:3806785-3806804 MsG0280006591.01.T01:intron 30.0%
GTCAGATCTTTAACATCAAT+AGG + Chr2:3803377-3803396 None:intergenic 30.0%
GTGCAATACATCGTATAATA+TGG - Chr2:3807303-3807322 MsG0280006591.01.T01:intron 30.0%
TAATATTCTTAAGTCGGCAA+TGG + Chr2:3805948-3805967 None:intergenic 30.0%
TACACTAGATAGTGATAGAT+GGG - Chr2:3804050-3804069 MsG0280006591.01.T01:intron 30.0%
TACATGCATATCAATGTTGT+TGG + Chr2:3804729-3804748 None:intergenic 30.0%
TATAATGTGGGTGATGAAAA+TGG - Chr2:3804539-3804558 MsG0280006591.01.T01:intron 30.0%
TATCTCACTTTACAGGTAAT+GGG - Chr2:3805890-3805909 MsG0280006591.01.T01:intron 30.0%
TCGTACAAAAACGACAAATT+GGG - Chr2:3803286-3803305 MsG0280006591.01.T01:CDS 30.0%
TCTAATATGCCATTCTTGTT+AGG - Chr2:3803089-3803108 MsG0280006591.01.T01:CDS 30.0%
TTACACTAGATAGTGATAGA+TGG - Chr2:3804049-3804068 MsG0280006591.01.T01:intron 30.0%
TTAGAAAAATTCACCAACAC+AGG + Chr2:3808323-3808342 None:intergenic 30.0%
TTATCTCACTTTACAGGTAA+TGG - Chr2:3805889-3805908 MsG0280006591.01.T01:intron 30.0%
TTGGTAGAACAACAGTTTAA+TGG - Chr2:3807023-3807042 MsG0280006591.01.T01:intron 30.0%
! ACATTTTGCTAACCCAAATT+AGG - Chr2:3806601-3806620 MsG0280006591.01.T01:CDS 30.0%
! ATCTTTTTCTTCTCACGATT+AGG - Chr2:3805856-3805875 MsG0280006591.01.T01:intron 30.0%
! CACTTAATGAGACATTCTTT+TGG - Chr2:3804221-3804240 MsG0280006591.01.T01:intron 30.0%
! CATTTTGCTAACCCAAATTA+GGG - Chr2:3806602-3806621 MsG0280006591.01.T01:CDS 30.0%
! CTGCCAACAAATATTTGTTA+TGG + Chr2:3802941-3802960 None:intergenic 30.0%
! GATAGTAGACAAATTAGCTT+TGG - Chr2:3805488-3805507 MsG0280006591.01.T01:intron 30.0%
! GGATAGATTTTTGCATTCAA+AGG + Chr2:3804686-3804705 None:intergenic 30.0%
! TACTAAGCCTCTCTTTATTT+GGG - Chr2:3806118-3806137 MsG0280006591.01.T01:intron 30.0%
! TCTGATCCTTCTTTTAATAC+GGG - Chr2:3806943-3806962 MsG0280006591.01.T01:intron 30.0%
! TCTTTTTCTTCTCACGATTA+GGG - Chr2:3805857-3805876 MsG0280006591.01.T01:intron 30.0%
! TTCAAGTGTCGCAATATATT+TGG + Chr2:3807499-3807518 None:intergenic 30.0%
! TTTGAAGCTTTACATTGCTT+CGG + Chr2:3805084-3805103 None:intergenic 30.0%
!! ATTGAGGTTTTGATGAAGAA+GGG + Chr2:3806761-3806780 None:intergenic 30.0%
!! CCAACAAATATTTGTTATGG+TGG + Chr2:3802938-3802957 None:intergenic 30.0%
!! GGTAAAATTTAGTCTTACAG+TGG + Chr2:3806329-3806348 None:intergenic 30.0%
!! GTTGAATTCATCTTTGGAAT+GGG - Chr2:3803151-3803170 MsG0280006591.01.T01:CDS 30.0%
!! GTTTAATGGATCTGGAATTT+TGG - Chr2:3807037-3807056 MsG0280006591.01.T01:intron 30.0%
!! TATTGAGGTTTTGATGAAGA+AGG + Chr2:3806762-3806781 None:intergenic 30.0%
!!! AAATGCCATTTTCAAATGCA+GGG - Chr2:3804458-3804477 MsG0280006591.01.T01:intron 30.0%
!!! ACTTAATGCACTAGTCTTTT+GGG - Chr2:3803933-3803952 MsG0280006591.01.T01:intron 30.0%
!!! CTAAAGCTAAGAGTTTTGAA+AGG - Chr2:3808339-3808358 MsG0280006591.01.T01:CDS 30.0%
!!! GGTCCTATCCATTTTTTTTT+TGG - Chr2:3807140-3807159 MsG0280006591.01.T01:intron 30.0%
!!! TAAATGCCATTTTCAAATGC+AGG - Chr2:3804457-3804476 MsG0280006591.01.T01:intron 30.0%
!!! TACTTAATGCACTAGTCTTT+TGG - Chr2:3803932-3803951 MsG0280006591.01.T01:intron 30.0%
!!! TTGTCGTTTTTGTACGATAT+GGG + Chr2:3803283-3803302 None:intergenic 30.0%
!!! TTTGTCGTTTTTGTACGATA+TGG + Chr2:3803284-3803303 None:intergenic 30.0%
!!! TTTTGGAACGTATATGTGTA+TGG + Chr2:3806063-3806082 None:intergenic 30.0%
AAACGACAAATTGGGTTCTA+TGG - Chr2:3803294-3803313 MsG0280006591.01.T01:CDS 35.0%
AACAAGATACCCTTAGAGTA+CGG + Chr2:3808298-3808317 None:intergenic 35.0%
AACGACAAATTGGGTTCTAT+GGG - Chr2:3803295-3803314 MsG0280006591.01.T01:CDS 35.0%
AAGTTGTGTGGATGAGTTAA+AGG - Chr2:3804607-3804626 MsG0280006591.01.T01:intron 35.0%
AATTGTCACAAGCTGAACTA+AGG - Chr2:3804020-3804039 MsG0280006591.01.T01:intron 35.0%
AGAACCAATAAAAAGGTGGA+GGG + Chr2:3806926-3806945 None:intergenic 35.0%
AGCATGCCATATTACTTAGT+GGG - Chr2:3806200-3806219 MsG0280006591.01.T01:intron 35.0%
ATAATCCTCCCTTCTTTCAT+TGG + Chr2:3804515-3804534 None:intergenic 35.0%
ATCGCAAGTAATATAGCTGT+CGG + Chr2:3807467-3807486 None:intergenic 35.0%
ATGCATGCTTGTCTACATAA+TGG - Chr2:3803665-3803684 MsG0280006591.01.T01:intron 35.0%
ATTCGAAAAATCTTACCCAC+GGG + Chr2:3805623-3805642 None:intergenic 35.0%
ATTCTTTCAAAGGGCTAAAG+TGG - Chr2:3802899-3802918 MsG0280006591.01.T01:CDS 35.0%
CAAAGATGAATTCAACCTTG+TGG + Chr2:3803147-3803166 None:intergenic 35.0%
CAATCATTAGCTCATATTGG+CGG - Chr2:3804948-3804967 MsG0280006591.01.T01:intron 35.0%
CACAAGGTTGAATTCATCTT+TGG - Chr2:3803145-3803164 MsG0280006591.01.T01:CDS 35.0%
CATTGATATGCATGTAGTTG+TGG - Chr2:3804733-3804752 MsG0280006591.01.T01:intron 35.0%
CCACGGATGACAATATAATA+TGG + Chr2:3803834-3803853 None:intergenic 35.0%
CCATATTATATTGTCATCCG+TGG - Chr2:3803831-3803850 MsG0280006591.01.T01:intron 35.0%
CGAAATCCCGTATTAAAAGA+AGG + Chr2:3806952-3806971 None:intergenic 35.0%
CGATTGGACAAAGAGTTATT+AGG + Chr2:3803404-3803423 None:intergenic 35.0%
CTACAACAATGCTAAATGGA+CGG - Chr2:3803001-3803020 MsG0280006591.01.T01:CDS 35.0%
GAAAATGGAGATGTTCATGA+TGG - Chr2:3804554-3804573 MsG0280006591.01.T01:intron 35.0%
GAAAGGACGAACAAAATGAA+TGG + Chr2:3806441-3806460 None:intergenic 35.0%
GAAGAAAAAGAATGCATAGG+AGG - Chr2:3805031-3805050 MsG0280006591.01.T01:intron 35.0%
GAGAAATTACAAGAAGAGAC+AGG - Chr2:3804629-3804648 MsG0280006591.01.T01:intron 35.0%
GAGTGCTTACTTTCTAATGA+AGG + Chr2:3804761-3804780 None:intergenic 35.0%
GATCAGAACCAATAAAAAGG+TGG + Chr2:3806930-3806949 None:intergenic 35.0%
GATGCGTCGCAATTAAAAAT+TGG - Chr2:3803601-3803620 MsG0280006591.01.T01:intron 35.0%
GTACTAAGCCTCTCTTTATT+TGG - Chr2:3806117-3806136 MsG0280006591.01.T01:intron 35.0%
GTTGCTACAACAATGCTAAA+TGG - Chr2:3802997-3803016 MsG0280006591.01.T01:CDS 35.0%
TAACATGCCCAAATAAAGAG+AGG + Chr2:3806128-3806147 None:intergenic 35.0%
TACATTCAAAGGAAGTTGTG+TGG - Chr2:3804595-3804614 MsG0280006591.01.T01:intron 35.0%
TCATAGAAAGTCATCAGTAC+AGG + Chr2:3806821-3806840 None:intergenic 35.0%
TGCTTGTCTACATAATGGTT+TGG - Chr2:3803670-3803689 MsG0280006591.01.T01:intron 35.0%
TGGCAATCATTAGCTCATAT+TGG - Chr2:3804945-3804964 MsG0280006591.01.T01:intron 35.0%
TTAAGCTTGAGAGATCTTCT+GGG - Chr2:3808204-3808223 MsG0280006591.01.T01:CDS 35.0%
TTGAACTGCATTTGTAGCTA+GGG + Chr2:3808093-3808112 None:intergenic 35.0%
TTGCAATTAGCAAAACCCTT+TGG + Chr2:3805598-3805617 None:intergenic 35.0%
TTTGTCTACTATCTAGTCTC+CGG + Chr2:3805481-3805500 None:intergenic 35.0%
! CTACTCTTCAGAACCATTTT+AGG - Chr2:3806982-3807001 MsG0280006591.01.T01:intron 35.0%
! CTCTCAAGCTTAAGATCTTT+TGG + Chr2:3808197-3808216 None:intergenic 35.0%
! GAACAACAGTTTAATGGATC+TGG - Chr2:3807029-3807048 MsG0280006591.01.T01:intron 35.0%
! GGTTGAATTCATCTTTGGAA+TGG - Chr2:3803150-3803169 MsG0280006591.01.T01:CDS 35.0%
! TCATAAGTTGGCTAGTTGTA+AGG - Chr2:3807895-3807914 MsG0280006591.01.T01:CDS 35.0%
! TTTTTGCATTCAAAGGGTTG+CGG + Chr2:3804679-3804698 None:intergenic 35.0%
!! AATGAGACATTCTTTTGGGT+TGG - Chr2:3804226-3804245 MsG0280006591.01.T01:intron 35.0%
!! ATGAGGACTGATTTGTGATA+AGG + Chr2:3806350-3806369 None:intergenic 35.0%
!! CTAAAATGGTTCTGAAGAGT+AGG + Chr2:3806984-3807003 None:intergenic 35.0%
!!! AGGTTGAGCCATTTTTTGAA+AGG + Chr2:3807769-3807788 None:intergenic 35.0%
!!! CAGCATTGAACTTTTTGGTT+TGG + Chr2:3807817-3807836 None:intergenic 35.0%
!!! GTGGTAGCCTTTTTTTTCTT+CGG + Chr2:3804081-3804100 None:intergenic 35.0%
AAACGAAACACCGTACTCTA+AGG - Chr2:3808285-3808304 MsG0280006591.01.T01:CDS 40.0%
AACGAAACACCGTACTCTAA+GGG - Chr2:3808286-3808305 MsG0280006591.01.T01:CDS 40.0%
AAGGGAGGAAGAAATCGATT+TGG - Chr2:3807065-3807084 MsG0280006591.01.T01:intron 40.0%
AATAAAAAGGTGGAGGGTGA+TGG + Chr2:3806920-3806939 None:intergenic 40.0%
AATACCCTTCTGCAGAAGAA+AGG + Chr2:3806504-3806523 None:intergenic 40.0%
ACCACAAGTCAGTCCTAATA+GGG - Chr2:3804096-3804115 MsG0280006591.01.T01:intron 40.0%
AGAAGCCCCACTAAGTAATA+TGG + Chr2:3806209-3806228 None:intergenic 40.0%
AGAAGGAGAATGAGAACGAT+TGG + Chr2:3803420-3803439 None:intergenic 40.0%
ATACAAAGCCACAGTTTGAG+CGG + Chr2:3808165-3808184 None:intergenic 40.0%
ATATGGAAGACGAGAACCTT+AGG + Chr2:3803496-3803515 None:intergenic 40.0%
ATATGGGATATCATGCGTGA+CGG + Chr2:3803267-3803286 None:intergenic 40.0%
ATCAGACTTAGGACTCGTTA+TGG - Chr2:3803197-3803216 MsG0280006591.01.T01:CDS 40.0%
ATTACTTAGTGGGGCTTCTA+TGG - Chr2:3806210-3806229 MsG0280006591.01.T01:intron 40.0%
ATTGGCAAAGGGGGAAAATT+AGG + Chr2:3806874-3806893 None:intergenic 40.0%
CACAAAAACACTAGCTGACA+TGG + Chr2:3806301-3806320 None:intergenic 40.0%
CAGAACCAATAAAAAGGTGG+AGG + Chr2:3806927-3806946 None:intergenic 40.0%
CAGAGCAAGGATAAGGTTTA+AGG - Chr2:3808250-3808269 MsG0280006591.01.T01:CDS 40.0%
CAGCATGCCATATTACTTAG+TGG - Chr2:3806199-3806218 MsG0280006591.01.T01:intron 40.0%
CATTCTTGTTAGGTAGAACG+GGG - Chr2:3803099-3803118 MsG0280006591.01.T01:CDS 40.0%
CCAAAATGATTGACGAAGAG+AGG - Chr2:3805348-3805367 MsG0280006591.01.T01:intron 40.0%
CCAAAGGGATCATCATTATC+CGG + Chr2:3803464-3803483 None:intergenic 40.0%
CCATTCTTGTTAGGTAGAAC+GGG - Chr2:3803098-3803117 MsG0280006591.01.T01:CDS 40.0%
CTAATAGGGTAAAAGTCGTG+TGG - Chr2:3804110-3804129 MsG0280006591.01.T01:intron 40.0%
CTTAAGCTTGAGAGATCTTC+TGG - Chr2:3808203-3808222 MsG0280006591.01.T01:CDS 40.0%
GAAGCAAACCTCATCTGATA+TGG + Chr2:3803513-3803532 None:intergenic 40.0%
GAATGGGAACCTATAAGAGA+AGG - Chr2:3803167-3803186 MsG0280006591.01.T01:CDS 40.0%
GATCTTGGTAAACACCTTCT+TGG + Chr2:3802971-3802990 None:intergenic 40.0%
GCATGCCATATTACTTAGTG+GGG - Chr2:3806201-3806220 MsG0280006591.01.T01:intron 40.0%
GCCATTCTTGTTAGGTAGAA+CGG - Chr2:3803097-3803116 MsG0280006591.01.T01:CDS 40.0%
GCTTAGCTGTACTCATAAGT+TGG - Chr2:3807883-3807902 MsG0280006591.01.T01:CDS 40.0%
GCTTGAGGATTTGATTGTGT+TGG + Chr2:3807792-3807811 None:intergenic 40.0%
GGCATCAACAATTACGTTGT+TGG + Chr2:3806280-3806299 None:intergenic 40.0%
GGTGAAGCCGAAGAAAAAAA+AGG - Chr2:3804071-3804090 MsG0280006591.01.T01:intron 40.0%
GTATTGCACGTTTACTCAGA+CGG + Chr2:3807292-3807311 None:intergenic 40.0%
GTGGCATCTTGTATTTGCTT+CGG + Chr2:3803353-3803372 None:intergenic 40.0%
GTTGAACTGCATTTGTAGCT+AGG + Chr2:3808094-3808113 None:intergenic 40.0%
TAAGCTTGAGAGATCTTCTG+GGG - Chr2:3808205-3808224 MsG0280006591.01.T01:CDS 40.0%
TACAGGCACATTTCAACCTT+AGG + Chr2:3806804-3806823 None:intergenic 40.0%
TACCACAAGTCAGTCCTAAT+AGG - Chr2:3804095-3804114 MsG0280006591.01.T01:intron 40.0%
TACTGCCCTGCATTTGAAAA+TGG + Chr2:3804466-3804485 None:intergenic 40.0%
TAGATGTGTTCATCAGAGCA+AGG - Chr2:3808237-3808256 MsG0280006591.01.T01:CDS 40.0%
TCATCATTATCCGGAAGAGT+AGG + Chr2:3803455-3803474 None:intergenic 40.0%
TGAGGATTTGATTGTGTTGG+AGG + Chr2:3807789-3807808 None:intergenic 40.0%
TGCATATCAATGTTGTTGGG+AGG + Chr2:3804725-3804744 None:intergenic 40.0%
TGTTCATCAGAGCAAGGATA+AGG - Chr2:3808243-3808262 MsG0280006591.01.T01:CDS 40.0%
TTGCTAATTGCAAAACCCGT+GGG - Chr2:3805605-3805624 MsG0280006591.01.T01:intron 40.0%
TTGTCTACTATCTAGTCTCC+GGG + Chr2:3805480-3805499 None:intergenic 40.0%
TTTCTCCTTCATCTGCAGAA+GGG - Chr2:3806557-3806576 MsG0280006591.01.T01:CDS 40.0%
TTTGCTAATTGCAAAACCCG+TGG - Chr2:3805604-3805623 MsG0280006591.01.T01:intron 40.0%
! AATTTTTACGCGCCAATGGA+GGG - Chr2:3803222-3803241 MsG0280006591.01.T01:CDS 40.0%
! ATCACCCTCCACCTTTTTAT+TGG - Chr2:3806919-3806938 MsG0280006591.01.T01:intron 40.0%
! CACACGACTTTTACCCTATT+AGG + Chr2:3804112-3804131 None:intergenic 40.0%
! CCTCTCTTCGTCAATCATTT+TGG + Chr2:3805351-3805370 None:intergenic 40.0%
! GCAAGGATAAGGTTTAAGGT+TGG - Chr2:3808254-3808273 MsG0280006591.01.T01:CDS 40.0%
! TACTGTTTTGCAGTAAACCG+TGG + Chr2:3805699-3805718 None:intergenic 40.0%
! TTTTGCAAACACTTCCCACA+AGG - Chr2:3803129-3803148 MsG0280006591.01.T01:CDS 40.0%
! TTTTGCATTCAAAGGGTTGC+GGG + Chr2:3804678-3804697 None:intergenic 40.0%
!! ATCTGGAATTTTGGAGAGGA+AGG - Chr2:3807046-3807065 MsG0280006591.01.T01:intron 40.0%
!! ATGGATCTGGAATTTTGGAG+AGG - Chr2:3807042-3807061 MsG0280006591.01.T01:intron 40.0%
!! CGTAGCAGCATTGAACTTTT+TGG + Chr2:3807822-3807841 None:intergenic 40.0%
!! GTCAGCTAGTGTTTTTGTGA+TGG - Chr2:3806302-3806321 MsG0280006591.01.T01:intron 40.0%
!! GTTGTTGTACTGATTGAGGT+AGG - Chr2:3806652-3806671 MsG0280006591.01.T01:CDS 40.0%
!! TCTGGAATTTTGGAGAGGAA+GGG - Chr2:3807047-3807066 MsG0280006591.01.T01:intron 40.0%
!! TGTGGTTGTTGTACTGATTG+AGG - Chr2:3806648-3806667 MsG0280006591.01.T01:CDS 40.0%
!! TTTTAATTGCGACGCATCGA+CGG + Chr2:3803599-3803618 None:intergenic 40.0%
!!! CTTTTTGGTTTGGTTGCTTG+AGG + Chr2:3807807-3807826 None:intergenic 40.0%
AAATCCCCTTCTGCAGATGA+AGG + Chr2:3806565-3806584 None:intergenic 45.0%
ACTCACCAATGAAAGAAGGG+AGG - Chr2:3804507-3804526 MsG0280006591.01.T01:intron 45.0%
AGCGACTCACCAATGAAAGA+AGG - Chr2:3804503-3804522 MsG0280006591.01.T01:intron 45.0%
AGCTCATATTGGCGGAAAAC+TGG - Chr2:3804956-3804975 MsG0280006591.01.T01:intron 45.0%
AGTACAACAACCACAGACAC+GGG + Chr2:3806643-3806662 None:intergenic 45.0%
CAACAATGCTAAATGGACGG+TGG - Chr2:3803004-3803023 MsG0280006591.01.T01:CDS 45.0%
CAGTACAACAACCACAGACA+CGG + Chr2:3806644-3806663 None:intergenic 45.0%
CCCGTTCTACCTAACAAGAA+TGG + Chr2:3803101-3803120 None:intergenic 45.0%
CCGGATAATGATGATCCCTT+TGG - Chr2:3803461-3803480 MsG0280006591.01.T01:intron 45.0%
CTCCATTGGCGCGTAAAAAT+TGG + Chr2:3803223-3803242 None:intergenic 45.0%
CTCGTCTTCCATATCAGATG+AGG - Chr2:3803502-3803521 MsG0280006591.01.T01:intron 45.0%
CTTAGGTCAATTGCGCCAAA+GGG + Chr2:3803479-3803498 None:intergenic 45.0%
CTTTCTCCTTCATCTGCAGA+AGG - Chr2:3806556-3806575 MsG0280006591.01.T01:CDS 45.0%
GCATCTTGTATTTGCTTCGG+TGG + Chr2:3803350-3803369 None:intergenic 45.0%
GCGACTCACCAATGAAAGAA+GGG - Chr2:3804504-3804523 MsG0280006591.01.T01:intron 45.0%
GGAGGTAATTGTAGACGAAG+TGG + Chr2:3804707-3804726 None:intergenic 45.0%
GGGCTTCTATGGTGTAATCA+AGG - Chr2:3806221-3806240 MsG0280006591.01.T01:intron 45.0%
GGTATCTTGTTCACCTGTGT+TGG - Chr2:3808307-3808326 MsG0280006591.01.T01:CDS 45.0%
GGTGTTTACCAAGATCGTCT+TGG - Chr2:3802975-3802994 MsG0280006591.01.T01:CDS 45.0%
TCTGCAGATGAAGGAGAAAG+AGG + Chr2:3806556-3806575 None:intergenic 45.0%
TCTTGTATTTGCTTCGGTGG+TGG + Chr2:3803347-3803366 None:intergenic 45.0%
TGGTCCTTTCTTCTGCAGAA+GGG - Chr2:3806497-3806516 MsG0280006591.01.T01:intron 45.0%
TGTAGCAACCAAGACGATCT+TGG + Chr2:3802986-3803005 None:intergenic 45.0%
TGTCTACTATCTAGTCTCCG+GGG + Chr2:3805479-3805498 None:intergenic 45.0%
TTATCCGGAAGAGTAGGAGA+AGG + Chr2:3803449-3803468 None:intergenic 45.0%
TTCTCCTTCATCTGCAGAAG+GGG - Chr2:3806558-3806577 MsG0280006591.01.T01:CDS 45.0%
TTGGCAGATGATGACCAAGA+AGG - Chr2:3802954-3802973 MsG0280006591.01.T01:CDS 45.0%
TTGGTCCTTTCTTCTGCAGA+AGG - Chr2:3806496-3806515 MsG0280006591.01.T01:intron 45.0%
! CAATTTTTACGCGCCAATGG+AGG - Chr2:3803221-3803240 MsG0280006591.01.T01:CDS 45.0%
!! ACCCTATTAGGACTGACTTG+TGG + Chr2:3804100-3804119 None:intergenic 45.0%
!!! TTTTTATATCAATTAATTTA+TGG - Chr2:3804896-3804915 MsG0280006591.01.T01:intron 5.0%
AAGACTCACCGCTCAAACTG+TGG - Chr2:3808154-3808173 MsG0280006591.01.T01:CDS 50.0%
ACGGTGGAGTTTGTAGATGG+TGG - Chr2:3803020-3803039 MsG0280006591.01.T01:CDS 50.0%
CATACTTATCCCCGTGTCTG+TGG - Chr2:3806630-3806649 MsG0280006591.01.T01:CDS 50.0%
CCTTAGGTCAATTGCGCCAA+AGG + Chr2:3803480-3803499 None:intergenic 50.0%
CCTTTGGCGCAATTGACCTA+AGG - Chr2:3803477-3803496 MsG0280006591.01.T01:intron 50.0%
CTGAAAAAGGATACACCCCC+CGG - Chr2:3805459-3805478 MsG0280006591.01.T01:intron 50.0%
GTACAACAACCACAGACACG+GGG + Chr2:3806642-3806661 None:intergenic 50.0%
GTCTACTATCTAGTCTCCGG+GGG + Chr2:3805478-3805497 None:intergenic 50.0%
TCCTCCTTCTCCTACTCTTC+CGG - Chr2:3803442-3803461 MsG0280006591.01.T01:intron 50.0%
TCTACTATCTAGTCTCCGGG+GGG + Chr2:3805477-3805496 None:intergenic 50.0%
TGGACGGTGGAGTTTGTAGA+TGG - Chr2:3803017-3803036 MsG0280006591.01.T01:CDS 50.0%
! GGCCAATTTTTACGCGCCAA+TGG - Chr2:3803218-3803237 MsG0280006591.01.T01:CDS 50.0%
! TGTATTTGCTTCGGTGGTGG+TGG + Chr2:3803344-3803363 None:intergenic 50.0%
!! GGAATTTTGGAGAGGAAGGG+AGG - Chr2:3807050-3807069 MsG0280006591.01.T01:intron 50.0%
CCAATGGAGGGTTACCACCA+TGG - Chr2:3803234-3803253 MsG0280006591.01.T01:CDS 55.0%
CCATGGTGGTAACCCTCCAT+TGG + Chr2:3803237-3803256 None:intergenic 55.0%
GGAAGAGTAGGAGAAGGAGG+AGG + Chr2:3803443-3803462 None:intergenic 55.0%
GTAGGAGAAGGAGGAGGAGA+AGG + Chr2:3803437-3803456 None:intergenic 55.0%
TCCGGAAGAGTAGGAGAAGG+AGG + Chr2:3803446-3803465 None:intergenic 55.0%
! GTGACGGAGTTTCTCCATGG+TGG + Chr2:3803251-3803270 None:intergenic 55.0%
! TGCGTGACGGAGTTTCTCCA+TGG + Chr2:3803254-3803273 None:intergenic 55.0%
!! CGGGGGGTGTATCCTTTTTC+AGG + Chr2:3805461-3805480 None:intergenic 55.0%
!! TGAAGTGTCGGTGCGTTACG+AGG - Chr2:3808061-3808080 MsG0280006591.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 3802894 3808385 3802894 ID=MsG0280006591.01;Name=MsG0280006591.01
Chr2 mRNA 3802894 3808385 3802894 ID=MsG0280006591.01.T01;Parent=MsG0280006591.01;Name=MsG0280006591.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|3|0|472
Chr2 exon 3807756 3808385 3807756 ID=MsG0280006591.01.T01:exon:1795;Parent=MsG0280006591.01.T01
Chr2 exon 3806509 3806800 3806509 ID=MsG0280006591.01.T01:exon:1794;Parent=MsG0280006591.01.T01
Chr2 exon 3802894 3803390 3802894 ID=MsG0280006591.01.T01:exon:1793;Parent=MsG0280006591.01.T01
Chr2 CDS 3807756 3808385 3807756 ID=MsG0280006591.01.T01:cds;Parent=MsG0280006591.01.T01
Chr2 CDS 3806509 3806800 3806509 ID=MsG0280006591.01.T01:cds;Parent=MsG0280006591.01.T01
Chr2 CDS 3802894 3803390 3802894 ID=MsG0280006591.01.T01:cds;Parent=MsG0280006591.01.T01
Gene Sequence

>MsG0280006591.01.T01

ATGGAATTCTTTCAAAGGGCTAAAGTGGTGCGTTTGAGAAGCCACCATAACAAATATTTGTTGGCAGATGATGACCAAGAAGGTGTTTACCAAGATCGTCTTGGTTGCTACAACAATGCTAAATGGACGGTGGAGTTTGTAGATGGTGGAAACTTGATTAGATTGAAGAGTCATTATGGAAAATACTTAACGGCATCTAATATGCCATTCTTGTTAGGTAGAACGGGGAAAAAAGTTTTGCAAACACTTCCCACAAGGTTGAATTCATCTTTGGAATGGGAACCTATAAGAGAAGGTAATCAAATCAGACTTAGGACTCGTTATGGCCAATTTTTACGCGCCAATGGAGGGTTACCACCATGGAGAAACTCCGTCACGCATGATATCCCATATCGTACAAAAACGACAAATTGGGTTCTATGGGACATTGATCTTGTCGAGCTTCGACCACCACCACCGAAGCAAATACAAGATGCCACACCTATTGATGTTAAAGATCTGACTTGTCCTAATAACTCTTTGTCCAATCGTTCTCATTCTCCTTCTCCTCCTCCTTCTCCTACTCTTCCGGATAATGATGATCCCTTTGGCGCAATTGACCTAAGGTTCTCGTCTTCCATATCAGATGAGGGCAGTAGAGATTTTGATGATCATAGCGACTCACCAATGAAAGAAGGGAGGATTATATTTTATAATGTGGGTGATGAAAATGGAGATGTTCATGATGGAAGTGAAGAAAAATTCTTTACATTCAAAGGAAGTTGTGTGGATGAGTTAAAGGAGAAATTACAAGAAGAGACAGGTCTTGATGATATTGTTGTATGTTCCCGCAACCCTTTGAATGCAAAAATCTATCCACTTCGTCTACAATTACCTCCCAACAACATTGATATGCATGTAGTTGTGGTTCCTTCATTAGAAACTGTACTCATAAGTTGGCTAGTTGTAAGGCCAAAAAACTTGCAATATAGTGTTGAAGATGCTTCAATCCACAACTTCAATTTAACTGATGCAAATCATCTCTATGCAAACTTTGATATCACAATAAGATCAAAGAATCCAAATTCCAAAGTGTCAATATACTATGATTCTATTGAAGTGTCGGTGCGTTACGAGGATCAAACCCTAGCTACAAATGCAGTTCAACCGTTTTTTCAACCACATAAGAATGTTACTAGGATGCATGCAAGACTCACCGCTCAAACTGTGGCTTTGTATGATTCTGTGCCAAAAGATCTTAAGCTTGAGAGATCTTCTGGGGATATTGAATTAGATGTGTTCATCAGAGCAAGGATAAGGTTTAAGGTTGGATTGTTGAAAACGAAACACCGTACTCTAAGGGTATCTTGTTCACCTGTGTTGGTGAATTTTTCTAAAGCTAAGAGTTTTGAAAGGGCCTATTGTGATGTTGAAATGTAA
Protein sequence

>MsG0280006591.01.T01

MEFFQRAKVVRLRSHHNKYLLADDDQEGVYQDRLGCYNNAKWTVEFVDGGNLIRLKSHYGKYLTASNMPFLLGRTGKKVLQTLPTRLNSSLEWEPIREGNQIRLRTRYGQFLRANGGLPPWRNSVTHDIPYRTKTTNWVLWDIDLVELRPPPPKQIQDATPIDVKDLTCPNNSLSNRSHSPSPPPSPTLPDNDDPFGAIDLRFSSSISDEGSRDFDDHSDSPMKEGRIIFYNVGDENGDVHDGSEEKFFTFKGSCVDELKEKLQEETGLDDIVVCSRNPLNAKIYPLRLQLPPNNIDMHVVVVPSLETVLISWLVVRPKNLQYSVEDASIHNFNLTDANHLYANFDITIRSKNPNSKVSIYYDSIEVSVRYEDQTLATNAVQPFFQPHKNVTRMHARLTAQTVALYDSVPKDLKLERSSGDIELDVFIRARIRFKVGLLKTKHRTLRVSCSPVLVNFSKAKSFERAYCDVEM*