AlfalfaGEDB | MsG0080048291.01

M. sativa cultivar ZhongmuNo.1 / MsG0080048291.01

KEGG: -
GO: GO:0000775 GO:0005634 GO:0045132
PFAM: PF07557

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048291.01.T01	XP_003606349.2	97.425	233	6	0	1	233	69	301	3.72E-163	462

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048291.01.T01	Q0WTB8	51.724	58	28	0	1	58	64	121	1.74E-11	66.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048291.01.T01	G7JNB6	97.425	233	6	0	1	233	69	301	1.78e-163	462

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047974.01	MsG0080048291.01	0.812157	4.883559e-51	3.081649e-48
MsG0080048291.01	MsG0080048856.01	0.820036	8.478514e-53	6.634752e-50
MsG0080048291.01	MsG0080049140.01	0.831324	1.780447e-55	1.925562e-52
MsG0080048291.01	MsG0180000348.01	0.803100	4.094883e-49	2.039901e-46
MsG0080048291.01	MsG0180000836.01	0.818989	1.469620e-52	1.117070e-49
MsG0080048291.01	MsG0180000983.01	0.824528	7.687342e-54	6.827006e-51
MsG0080048291.01	MsG0180003920.01	0.802560	5.295625e-49	2.602011e-46
MsG0080048291.01	MsG0180003943.01	0.835784	1.371988e-56	1.695198e-53
MsG0080048291.01	MsG0180004049.01	0.867146	1.696740e-65	5.861679e-62
MsG0080048291.01	MsG0180004099.01	0.888590	5.161105e-73	4.023111e-69
MsG0080048291.01	MsG0180004754.01	0.824941	6.142723e-54	5.520673e-51
MsG0080048291.01	MsG0180004958.01	0.830077	3.598616e-55	3.751720e-52
MsG0080048291.01	MsG0180004970.01	0.841417	4.812328e-58	7.066890e-55
MsG0080048291.01	MsG0180005575.01	0.819397	1.186741e-52	9.121568e-50
MsG0080048291.01	MsG0180006000.01	0.835468	1.649017e-56	2.018272e-53
MsG0080048291.01	MsG0180006024.01	0.818181	2.241572e-52	1.666041e-49
MsG0080048291.01	MsG0280006405.01	0.805680	1.187549e-49	6.322209e-47
MsG0080048291.01	MsG0280006591.01	0.825251	5.189202e-54	4.704887e-51
MsG0080048291.01	MsG0280007452.01	0.814667	1.370904e-51	9.255377e-49
MsG0080048291.01	MsG0280007506.01	0.800151	1.648426e-48	7.619759e-46
MsG0080048291.01	MsG0280007955.01	0.811348	7.321565e-51	4.521088e-48
MsG0080048291.01	MsG0280008362.01	0.805367	1.381257e-49	7.294325e-47
MsG0080048291.01	MsG0280008457.01	0.802458	5.558258e-49	2.724069e-46
MsG0080048291.01	MsG0280009794.01	0.841398	4.867365e-58	7.143591e-55
MsG0080048291.01	MsG0280010533.01	0.804106	2.532598e-49	1.294743e-46
MsG0080048291.01	MsG0280010650.01	0.800455	1.429770e-48	6.660142e-46
MsG0080048291.01	MsG0280010778.01	0.824745	6.834655e-54	6.108266e-51
MsG0080048291.01	MsG0280010779.01	0.810389	1.181202e-50	7.110524e-48
MsG0080048291.01	MsG0280010788.01	0.816192	6.275581e-52	4.417141e-49
MsG0080048291.01	MsG0280011003.01	0.816332	5.840960e-52	4.127016e-49
MsG0080048291.01	MsG0280011013.01	0.810795	9.648088e-51	5.871542e-48
MsG0080048291.01	MsG0280011014.01	0.838902	2.181383e-57	2.963231e-54
MsG0080048291.01	MsG0280011154.01	0.801814	7.539748e-49	3.635150e-46
MsG0080048291.01	MsG0280011258.01	0.830012	3.730761e-55	3.882494e-52
MsG0080048291.01	MsG0280011282.01	0.825530	4.459186e-54	4.074999e-51
MsG0080048291.01	MsG0280011341.01	0.817102	3.924302e-52	2.831633e-49
MsG0080048291.01	MsG0280011416.01	0.801376	9.273062e-49	4.421528e-46
MsG0080048291.01	MsG0380011501.01	0.805280	1.440543e-49	7.590107e-47
MsG0080048291.01	MsG0380013476.01	0.818992	1.467267e-52	1.115367e-49
MsG0080048291.01	MsG0380014289.01	0.801970	7.002949e-49	3.389546e-46
MsG0080048291.01	MsG0380015332.01	0.830114	3.524336e-55	3.678530e-52
MsG0080048291.01	MsG0380015548.01	0.800385	1.477288e-48	6.869568e-46
MsG0080048291.01	MsG0380015555.01	0.808711	2.708071e-50	1.559384e-47
MsG0080048291.01	MsG0380015631.01	0.808270	3.363865e-50	1.914993e-47
MsG0080048291.01	MsG0380015677.01	0.805458	1.322103e-49	6.998319e-47
MsG0080048291.01	MsG0380015805.01	0.823249	1.533458e-53	1.313250e-50
MsG0080048291.01	MsG0380015944.01	0.825011	5.914705e-54	5.326442e-51
MsG0080048291.01	MsG0380016140.01	0.802336	5.889014e-49	2.877299e-46
MsG0080048291.01	MsG0380016517.01	0.808372	3.198589e-50	1.825779e-47
MsG0080048291.01	MsG0380016703.01	0.818804	1.618756e-52	1.223959e-49
MsG0080048291.01	MsG0380016920.01	0.815721	7.994988e-52	5.555381e-49
MsG0080048291.01	MsG0380016970.01	0.807027	6.175639e-50	3.403234e-47
MsG0080048291.01	MsG0380016994.01	0.836195	1.079046e-56	1.350186e-53
MsG0080048291.01	MsG0380017159.01	0.838546	2.697123e-57	3.624433e-54
MsG0080048291.01	MsG0480018163.01	0.814331	1.627085e-51	1.088602e-48
MsG0080048291.01	MsG0480018313.01	0.809685	1.674274e-50	9.895270e-48
MsG0080048291.01	MsG0480018397.01	0.823555	1.300544e-53	1.123478e-50
MsG0080048291.01	MsG0480018919.01	0.807231	5.592356e-50	3.098151e-47
MsG0080048291.01	MsG0480019276.01	0.816630	5.009493e-52	3.568291e-49
MsG0080048291.01	MsG0480019350.01	0.829914	3.942676e-55	4.091803e-52
MsG0080048291.01	MsG0480019710.01	0.828996	6.589919e-55	6.656803e-52
MsG0080048291.01	MsG0480019922.01	0.836659	8.218143e-57	1.042468e-53
MsG0080048291.01	MsG0480020402.01	0.820435	6.870981e-53	5.436263e-50
MsG0080048291.01	MsG0480020495.01	0.851245	1.005983e-60	2.023596e-57
MsG0080048291.01	MsG0480020780.01	0.806753	7.057787e-50	3.861809e-47
MsG0080048291.01	MsG0480020847.01	0.825714	4.031430e-54	3.703642e-51
MsG0080048291.01	MsG0480020909.01	0.806042	9.969643e-50	5.356868e-47
MsG0080048291.01	MsG0480021138.01	0.809732	1.636036e-50	9.681392e-48
MsG0080048291.01	MsG0480022045.01	0.830820	2.367676e-55	2.522764e-52
MsG0080048291.01	MsG0480022549.01	0.810045	1.400822e-50	8.357863e-48
MsG0080048291.01	MsG0480023130.01	0.815606	8.479991e-52	5.873988e-49
MsG0080048291.01	MsG0480023262.01	0.805544	1.268180e-49	6.727519e-47
MsG0080048291.01	MsG0480023463.01	0.809362	1.964586e-50	1.151180e-47
MsG0080048291.01	MsG0480023600.01	0.819405	1.181906e-52	9.086545e-50
MsG0080048291.01	MsG0580024330.01	0.802267	6.085222e-49	2.967880e-46
MsG0080048291.01	MsG0580024489.01	0.842519	2.461744e-58	3.742068e-55
MsG0080048291.01	MsG0580025614.01	0.800397	1.469502e-48	6.835266e-46
MsG0080048291.01	MsG0580026059.01	0.820820	5.605631e-53	4.482729e-50
MsG0080048291.01	MsG0580026593.01	0.818725	1.687069e-52	1.272874e-49
MsG0080048291.01	MsG0580027431.01	0.809083	2.254352e-50	1.311133e-47
MsG0080048291.01	MsG0580028436.01	0.819895	9.133546e-53	7.118911e-50
MsG0080048291.01	MsG0580029640.01	0.817121	3.886332e-52	2.805677e-49
MsG0080048291.01	MsG0580029825.01	0.823481	1.353556e-53	1.166863e-50
MsG0080048291.01	MsG0680030949.01	0.829448	5.119102e-55	5.240674e-52
MsG0080048291.01	MsG0680031214.01	0.827847	1.247763e-54	1.219020e-51
MsG0080048291.01	MsG0680031506.01	0.816440	5.525514e-52	3.915237e-49
MsG0080048291.01	MsG0680032843.01	0.809083	2.254389e-50	1.311153e-47
MsG0080048291.01	MsG0680034853.01	0.850738	1.398059e-60	2.765558e-57
MsG0080048291.01	MsG0680035658.01	0.800918	1.150236e-48	5.421699e-46
MsG0080048291.01	MsG0780036147.01	0.804280	2.330349e-49	1.196644e-46
MsG0080048291.01	MsG0780036752.01	0.842867	1.989239e-58	3.056589e-55
MsG0080048291.01	MsG0780036815.01	0.824390	8.283327e-54	7.326630e-51
MsG0080048291.01	MsG0780038401.01	0.821522	3.860192e-53	3.147801e-50
MsG0080048291.01	MsG0780038424.01	0.837795	4.209998e-57	5.529570e-54
MsG0080048291.01	MsG0780038603.01	0.813104	3.029835e-51	1.960589e-48
MsG0080048291.01	MsG0780039170.01	0.801494	8.770927e-49	4.194630e-46
MsG0080048291.01	MsG0780039527.01	0.800282	1.550560e-48	7.191521e-46
MsG0080048291.01	MsG0780039697.01	0.821897	3.161471e-53	2.605699e-50
MsG0080048291.01	MsG0780039866.01	0.846449	2.157097e-59	3.714517e-56
MsG0080048291.01	MsG0780040057.01	0.817076	3.976777e-52	2.867546e-49
MsG0080048291.01	MsG0780040529.01	0.800422	1.452176e-48	6.759231e-46
MsG0080048291.01	MsG0780040669.01	0.800401	1.466222e-48	6.820846e-46
MsG0080048291.01	MsG0780041063.01	0.816241	6.119354e-52	4.312876e-49
MsG0080048291.01	MsG0880042091.01	0.812120	4.973576e-51	3.135225e-48
MsG0080048291.01	MsG0880042380.01	0.802808	4.706525e-49	2.327440e-46
MsG0080048291.01	MsG0880042961.01	0.801730	7.844230e-49	3.773755e-46
MsG0080048291.01	MsG0880043034.01	0.806275	8.901985e-50	4.811937e-47
MsG0080048291.01	MsG0880043614.01	0.802922	4.457781e-49	2.210722e-46
MsG0080048291.01	MsG0880044782.01	0.814078	1.849949e-51	1.229241e-48
MsG0080048291.01	MsG0880045145.01	0.801540	8.578856e-49	4.107519e-46
MsG0080048291.01	MsG0880045506.01	0.803957	2.720019e-49	1.385292e-46
MsG0080048291.01	MsG0880046012.01	0.807651	4.555042e-50	2.551100e-47
MsG0080048291.01	MsG0880047226.01	0.807609	4.649822e-50	2.601290e-47
MsG0080048291.01	MsG0880047473.01	0.821366	4.194217e-53	3.405420e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048291.01.T01	MTR_4g057530	97.425	233	6	0	1	233	69	301	4.50e-167	462
MsG0080048291.01.T01	MTR_1g090657	39.604	101	58	1	134	231	295	395	5.93e-14	70.5
MsG0080048291.01.T01	MTR_1g090657	39.604	101	58	1	134	231	279	379	6.46e-14	70.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048291.01.T01	AT3G44960	37.391	230	112	7	2	221	61	268	1.08e-24	99.0
MsG0080048291.01.T01	AT3G44960	38.627	233	106	10	2	221	61	269	3.06e-23	95.1
MsG0080048291.01.T01	AT3G44960	36.957	230	118	6	2	221	61	273	3.18e-21	89.7
MsG0080048291.01.T01	AT5G04320	51.724	58	28	0	1	58	13	70	1.39e-12	66.6
MsG0080048291.01.T01	AT5G04320	51.724	58	28	0	1	58	40	97	1.60e-12	66.6
MsG0080048291.01.T01	AT5G04320	51.724	58	28	0	1	58	64	121	1.77e-12	66.6
MsG0080048291.01.T01	AT5G04320	51.724	58	28	0	1	58	64	121	1.77e-12	66.6
MsG0080048291.01.T01	AT5G04320	51.724	58	28	0	1	58	64	121	1.77e-12	66.6

Find 33 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGAGGGCTGCTTTGATTAA+TGG	0.208431	contig265end:-123070	MsG0080048291.01.T01:CDS
CTTCTCATCTTGATATTTAG+AGG	0.230253	contig265end:+120957	None:intergenic
AGAAAACTTGTTTGAAATAG+AGG	0.337726	contig265end:-121147	MsG0080048291.01.T01:CDS
TGCATCATTATCACAATTAC+AGG	0.352256	contig265end:-122240	MsG0080048291.01.T01:intron
CATCATCATTGCTAATTCTC+GGG	0.358143	contig265end:+122087	None:intergenic
GAAGCACCAAGGCATTCTTT+TGG	0.363233	contig265end:-121029	MsG0080048291.01.T01:CDS
AGAAGCTTCAAATGCAAAAC+TGG	0.367212	contig265end:-123742	MsG0080048291.01.T01:CDS
TCATCATCATTGCTAATTCT+CGG	0.397082	contig265end:+122086	None:intergenic
TTTCTAGAGGTTCGTGTACA+TGG	0.406909	contig265end:+121165	None:intergenic
ATTTAGAGGAACCTCTTTGT+AGG	0.408254	contig265end:+120971	None:intergenic
AACCGCTAACATGAGACTAT+TGG	0.409768	contig265end:+123706	None:intergenic
CAATATGCTATCACTCAATC+TGG	0.413239	contig265end:-121119	MsG0080048291.01.T01:CDS
AAGAAAAGGTTAAAGACAAT+AGG	0.449030	contig265end:-121898	MsG0080048291.01.T01:intron
TGAACAGTAAAATGATAGAA+AGG	0.482472	contig265end:-123802	None:intergenic
GTTTGACCAGGAGACGCGTT+AGG	0.490458	contig265end:-122052	MsG0080048291.01.T01:CDS
AAAGAATAAAAGCAAAGAAA+AGG	0.491272	contig265end:-121912	MsG0080048291.01.T01:CDS
GTCGCGAAGGGCAGCTGAGA+AGG	0.491402	contig265end:-121000	MsG0080048291.01.T01:CDS
GAGACATTCTGCTGCGTCAA+AGG	0.508047	contig265end:-121189	MsG0080048291.01.T01:CDS
GTCCAATAGTCTCATGTTAG+CGG	0.514665	contig265end:-123708	MsG0080048291.01.T01:intron
AGAGGAACCTCTTTGTAGGA+TGG	0.515473	contig265end:+120975	None:intergenic
TCTACTCCTAACGCGTCTCC+TGG	0.523467	contig265end:+122046	None:intergenic
TGCAGGAGCTTAACTTGGGG+AGG	0.533630	contig265end:-123233	MsG0080048291.01.T01:intron
TTCTCAGCTGCCCTTCGCGA+CGG	0.535069	contig265end:+121002	None:intergenic
ACTGAAAGAAGAGAAAGCTC+TGG	0.539195	contig265end:-121062	MsG0080048291.01.T01:CDS
TGGAAACACCTTCAAAATGC+AGG	0.544169	contig265end:-123050	MsG0080048291.01.T01:intron
CTCTAAATATCAAGATGAGA+AGG	0.558638	contig265end:-120956	MsG0080048291.01.T01:CDS
GGTCTTCCAAAAGAATGCCT+TGG	0.558786	contig265end:+121023	None:intergenic
GCAGGAGCTTAACTTGGGGA+GGG	0.566011	contig265end:-123232	MsG0080048291.01.T01:intron
ATCATCATTGCTAATTCTCG+GGG	0.585616	contig265end:+122088	None:intergenic
AGTAAAATGATAGAAAGGAG+TGG	0.612385	contig265end:-123797	None:intergenic
GGAAGCAGTAGAAGAACCAA+TGG	0.622754	contig265end:+121937	None:intergenic
GAAGGTTCCATCCTACAAAG+AGG	0.659677	contig265end:-120982	MsG0080048291.01.T01:CDS
GTTTAAGAAATGAAGCACCA+AGG	0.725235	contig265end:-121040	MsG0080048291.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTAATTTATATATTAAA+AGG	-	contig265end:121318-121337	MsG0080048291.01.T01:intron	0.0%
!!	TTAATTTATATATTAAAAGG+TGG	-	contig265end:121321-121340	MsG0080048291.01.T01:intron	10.0%
!!!	AATCATAATTTAAAATAACA+TGG	+	contig265end:122177-122196	None:intergenic	10.0%
!!	AAAAAAATGAGATGATTATA+CGG	+	contig265end:121231-121250	None:intergenic	15.0%
!!	ATAAATTTGACAAATATGTT+AGG	-	contig265end:121346-121365	MsG0080048291.01.T01:intron	15.0%
!!	TAAATTTGACAAATATGTTA+GGG	-	contig265end:121347-121366	MsG0080048291.01.T01:intron	15.0%
!!	TTTATTAATGTATCTTTCAA+TGG	-	contig265end:122222-122241	MsG0080048291.01.T01:intron	15.0%
!!!	AAAATTGATTTGAATATGTT+TGG	+	contig265end:121962-121981	None:intergenic	15.0%
!!	AAAGAATAAAAGCAAAGAAA+AGG	-	contig265end:122826-122845	MsG0080048291.01.T01:intron	20.0%
!!	AATATGAGAAAAATAAGTGA+AGG	+	contig265end:122540-122559	None:intergenic	20.0%
!!	ATACTTAGTAACTAAAAATC+AGG	+	contig265end:121726-121745	None:intergenic	20.0%
!!	ATATGAGAAAAATAAGTGAA+GGG	+	contig265end:122539-122558	None:intergenic	20.0%
!!	TGAAAAATTGTTGTGTTAAT+AGG	-	contig265end:122990-123009	MsG0080048291.01.T01:intron	20.0%
!!!	AAATTATTATTTTGGAACTC+TGG	+	contig265end:122966-122985	None:intergenic	20.0%
!!!	AATTTATCATATTGACTTTG+TGG	-	contig265end:121445-121464	MsG0080048291.01.T01:intron	20.0%
!!!	ATTTATCATATTGACTTTGT+GGG	-	contig265end:121446-121465	MsG0080048291.01.T01:intron	20.0%
!!!	CATAATTTAAAATAACATGG+TGG	+	contig265end:122174-122193	None:intergenic	20.0%
!!!	TGATAATGATGCATTATTTT+CGG	+	contig265end:122491-122510	None:intergenic	20.0%
!!!	TTCACTTATTTTTCTCATAT+TGG	-	contig265end:122539-122558	MsG0080048291.01.T01:intron	20.0%
!!!	TTTTTCTTTGTCGTATAATT+TGG	-	contig265end:122589-122608	MsG0080048291.01.T01:intron	20.0%
!	AAGAAAAGGTTAAAGACAAT+AGG	-	contig265end:122840-122859	MsG0080048291.01.T01:intron	25.0%
!	AATTCTGCTTAACTTTGTTA+TGG	-	contig265end:122768-122787	MsG0080048291.01.T01:intron	25.0%
!	ATACGACAAAGAAAAAAATG+AGG	+	contig265end:122585-122604	None:intergenic	25.0%
!	ATTTAATGGAAGACACTAAT+AGG	-	contig265end:123362-123381	MsG0080048291.01.T01:intron	25.0%
!	CACATAAGTATATAGTGATA+CGG	-	contig265end:123289-123308	MsG0080048291.01.T01:intron	25.0%
!	CAGGTAATAATTTGAGAATA+TGG	+	contig265end:121171-121190	None:intergenic	25.0%
!	GAAAAGAAAAAGGAATTATG+AGG	+	contig265end:121548-121567	None:intergenic	25.0%
!	GTTAATCTTTCCATAAAGAA+GGG	+	contig265end:122152-122171	None:intergenic	25.0%
!	TCATTGTACTCAATCTAAAA+CGG	+	contig265end:122311-122330	None:intergenic	25.0%
!	TCTATTATTTCCCTTCTTTA+TGG	-	contig265end:122139-122158	MsG0080048291.01.T01:intron	25.0%
!	TCTTATGAAGTTTAACAATG+TGG	-	contig265end:122258-122277	MsG0080048291.01.T01:CDS	25.0%
!	TTAGTTACTAAGTATGTGTT+TGG	-	contig265end:121731-121750	MsG0080048291.01.T01:intron	25.0%
!	TTTAATGGAAGACACTAATA+GGG	-	contig265end:123363-123382	MsG0080048291.01.T01:intron	25.0%
!!	AGAAAACTTGTTTGAAATAG+AGG	-	contig265end:123591-123610	MsG0080048291.01.T01:intron	25.0%
!!	ATTTCAAACAAGTTTTCTAG+AGG	+	contig265end:123589-123608	None:intergenic	25.0%
!!!	AAAAATGGGTTGTTATAAGA+CGG	+	contig265end:122424-122443	None:intergenic	25.0%
!!!	ACTTATTTTTCTCATATTGG+AGG	-	contig265end:122542-122561	MsG0080048291.01.T01:intron	25.0%
!!!	ATTGATTTGAATATGTTTGG+AGG	+	contig265end:121959-121978	None:intergenic	25.0%
!!!	TTCTTTGCTTTTATTCTTTC+TGG	+	contig265end:122825-122844	None:intergenic	25.0%
	AAATTCACGTTAAAATAGCC+TGG	-	contig265end:121822-121841	MsG0080048291.01.T01:intron	30.0%
	AATTCACGTTAAAATAGCCT+GGG	-	contig265end:121823-121842	MsG0080048291.01.T01:intron	30.0%
	AATTGCAGAAGAAACTTATG+AGG	-	contig265end:123196-123215	MsG0080048291.01.T01:intron	30.0%
	ATGACAAAAATCATGTTTGG+AGG	-	contig265end:121889-121908	MsG0080048291.01.T01:intron	30.0%
	ATTCGTGCATTTCATATCAA+TGG	+	contig265end:123260-123279	None:intergenic	30.0%
	CAAAATATGTCAACGAAGAA+GGG	+	contig265end:122735-122754	None:intergenic	30.0%
	CATGCGTTAATAGCATTTAA+TGG	-	contig265end:123348-123367	MsG0080048291.01.T01:intron	30.0%
	CGTATCACTATATACTTATG+TGG	+	contig265end:123291-123310	None:intergenic	30.0%
	CTCTAAATATCAAGATGAGA+AGG	-	contig265end:123782-123801	MsG0080048291.01.T01:CDS	30.0%
	CTTATTGAAGTTCATCTATC+AGG	+	contig265end:121991-122010	None:intergenic	30.0%
	CTTCTCATCTTGATATTTAG+AGG	+	contig265end:123784-123803	None:intergenic	30.0%
	GGTTAATCTTTCCATAAAGA+AGG	+	contig265end:122153-122172	None:intergenic	30.0%
	GTTCAAAAGGGAAAAGAAAA+AGG	+	contig265end:121558-121577	None:intergenic	30.0%
	TCACTATATACTTATGTGGT+AGG	+	contig265end:123287-123306	None:intergenic	30.0%
	TCATCATCATTGCTAATTCT+CGG	+	contig265end:122655-122674	None:intergenic	30.0%
	TCTCAAATTATTACCTGTGT+CGG	-	contig265end:121174-121193	MsG0080048291.01.T01:CDS	30.0%
	TCTTTGTCGTATAATTTGGT+TGG	-	contig265end:122593-122612	MsG0080048291.01.T01:intron	30.0%
	TGCATCATTATCACAATTAC+AGG	-	contig265end:122498-122517	MsG0080048291.01.T01:intron	30.0%
	TGCATGACAAAAATCATGTT+TGG	-	contig265end:121886-121905	MsG0080048291.01.T01:intron	30.0%
	TGTATAGAAAGTTTGTCTCT+TGG	-	contig265end:122051-122070	MsG0080048291.01.T01:CDS	30.0%
	TGTGTTATGTGTAAGAAGTA+AGG	-	contig265end:122015-122034	MsG0080048291.01.T01:intron	30.0%
	TTAATGGAAGACACTAATAG+GGG	-	contig265end:123364-123383	MsG0080048291.01.T01:intron	30.0%
	TTGTAACGTGTCAGTAAAAA+TGG	+	contig265end:123392-123411	None:intergenic	30.0%
!	AAAAACAATGTTGTTTGACC+AGG	-	contig265end:122674-122693	MsG0080048291.01.T01:intron	30.0%
!	CTGAAACATGCAATTTTGTA+AGG	+	contig265end:121270-121289	None:intergenic	30.0%
!	TAAGTATGTGTTTGGAATTG+CGG	-	contig265end:121739-121758	MsG0080048291.01.T01:intron	30.0%
!	TAGTGATTTTGTGTTTCTTG+TGG	-	contig265end:121475-121494	MsG0080048291.01.T01:intron	30.0%
!	TTTTGTCATGCATAACTGTT+TGG	+	contig265end:121878-121897	None:intergenic	30.0%
!!	TTATAACAACCCATTTTTGC+AGG	-	contig265end:122426-122445	MsG0080048291.01.T01:intron	30.0%
!!!	TAAGTTCTCTTTTTTTGCAC+AGG	-	contig265end:123515-123534	MsG0080048291.01.T01:intron	30.0%
	ACATTAGCCATAGATTCACA+TGG	+	contig265end:123159-123178	None:intergenic	35.0%
	AGAAGCTTCAAATGCAAAAC+TGG	-	contig265end:120996-121015	MsG0080048291.01.T01:CDS	35.0%
	ATAGTCCTTGAATTGCGAAT+TGG	-	contig265end:123030-123049	MsG0080048291.01.T01:intron	35.0%
	ATCATCATTGCTAATTCTCG+GGG	+	contig265end:122653-122672	None:intergenic	35.0%
	ATTCACGTTAAAATAGCCTG+GGG	-	contig265end:121824-121843	MsG0080048291.01.T01:intron	35.0%
	ATTTAGAGGAACCTCTTTGT+AGG	+	contig265end:123770-123789	None:intergenic	35.0%
	ATTTGCCAATTCGCAATTCA+AGG	+	contig265end:123038-123057	None:intergenic	35.0%
	CAATATGCTATCACTCAATC+TGG	-	contig265end:123619-123638	MsG0080048291.01.T01:intron	35.0%
	CATCATCATTGCTAATTCTC+GGG	+	contig265end:122654-122673	None:intergenic	35.0%
	CCAAATTCAGTGTATCAATG+TGG	-	contig265end:122332-122351	MsG0080048291.01.T01:intron	35.0%
	CCACATTGATACACTGAATT+TGG	+	contig265end:122335-122354	None:intergenic	35.0%
	GCAAAATATGTCAACGAAGA+AGG	+	contig265end:122736-122755	None:intergenic	35.0%
	GCAATATAGGCCTAAAACAA+CGG	-	contig265end:122378-122397	MsG0080048291.01.T01:intron	35.0%
	GCACTTACACTTCTTATGAA+AGG	-	contig265end:121082-121101	MsG0080048291.01.T01:CDS	35.0%
	GCATGTTTCAGTCTACTTTA+GGG	-	contig265end:121279-121298	MsG0080048291.01.T01:intron	35.0%
	GTGGTCATTCTATGTACAAA+CGG	-	contig265end:122277-122296	MsG0080048291.01.T01:CDS	35.0%
	TAATGGAAGACACTAATAGG+GGG	-	contig265end:123365-123384	MsG0080048291.01.T01:intron	35.0%
	TCATGCATAACTGTTTGGTT+TGG	+	contig265end:121873-121892	None:intergenic	35.0%
	TGCATGTTTCAGTCTACTTT+AGG	-	contig265end:121278-121297	MsG0080048291.01.T01:intron	35.0%
	TTGATCGATGCTCACAATTT+CGG	-	contig265end:123455-123474	MsG0080048291.01.T01:intron	35.0%
!	AGGTTAGTTCTTATGCTCAT+TGG	-	contig265end:122860-122879	MsG0080048291.01.T01:intron	35.0%
!	ATTTTGCAGGAGCTTAACTT+GGG	-	contig265end:121501-121520	MsG0080048291.01.T01:intron	35.0%
!	CTTCTTTCAGTTTTCACAGA+TGG	+	contig265end:123667-123686	None:intergenic	35.0%
!	GTTTAAGAAATGAAGCACCA+AGG	-	contig265end:123698-123717	MsG0080048291.01.T01:intron	35.0%
!	TTTCCCTTTTGAACTCGAAT+CGG	-	contig265end:121564-121583	MsG0080048291.01.T01:intron	35.0%
!!	ATAACCGATTCGAGTTCAAA+AGG	+	contig265end:121571-121590	None:intergenic	35.0%
!!	TAACCGATTCGAGTTCAAAA+GGG	+	contig265end:121570-121589	None:intergenic	35.0%
!!	TTTCTTGTGGTTGATTTTGC+AGG	-	contig265end:121488-121507	MsG0080048291.01.T01:intron	35.0%
!!!	CCACTTTTTCCTGCAAAAAT+GGG	+	contig265end:122438-122457	None:intergenic	35.0%
!!!	TCCACTTTTTCCTGCAAAAA+TGG	+	contig265end:122439-122458	None:intergenic	35.0%
	AACCGCTAACATGAGACTAT+TGG	+	contig265end:121035-121054	None:intergenic	40.0%
	AAGTGAAGGGTTTACAGATC+AGG	+	contig265end:122526-122545	None:intergenic	40.0%
	ACTGAAAGAAGAGAAAGCTC+TGG	-	contig265end:123676-123695	MsG0080048291.01.T01:intron	40.0%
	AGGCCTATATTGCACATTGT+AGG	+	contig265end:122371-122390	None:intergenic	40.0%
	AGTAGAGATAGTGATGCTTG+AGG	-	contig265end:121384-121403	MsG0080048291.01.T01:intron	40.0%
	ATAGTGATACGGTATCCAAG+TGG	-	contig265end:123300-123319	MsG0080048291.01.T01:intron	40.0%
	ATTCTATGTACAAACGGCCT+AGG	-	contig265end:122283-122302	MsG0080048291.01.T01:CDS	40.0%
	CCTATATTGCACATTGTAGG+GGG	+	contig265end:122368-122387	None:intergenic	40.0%
	CTATATTGCACATTGTAGGG+GGG	+	contig265end:122367-122386	None:intergenic	40.0%
	GACAAATATGTTAGGGACTG+TGG	-	contig265end:121354-121373	MsG0080048291.01.T01:intron	40.0%
	GCCTATATTGCACATTGTAG+GGG	+	contig265end:122369-122388	None:intergenic	40.0%
	GGAGATAGACACTGAAAAAG+TGG	-	contig265end:122456-122475	MsG0080048291.01.T01:intron	40.0%
	GGCCTATATTGCACATTGTA+GGG	+	contig265end:122370-122389	None:intergenic	40.0%
	GTAGAGATAGTGATGCTTGA+GGG	-	contig265end:121385-121404	MsG0080048291.01.T01:intron	40.0%
	GTCCAATAGTCTCATGTTAG+CGG	-	contig265end:121030-121049	MsG0080048291.01.T01:CDS	40.0%
	TACAATGCCATCACATGTGT+CGG	+	contig265end:121143-121162	None:intergenic	40.0%
	TAGAGATAGTGATGCTTGAG+GGG	-	contig265end:121386-121405	MsG0080048291.01.T01:intron	40.0%
	TAGCCATAGATTCACATGGA+AGG	+	contig265end:123155-123174	None:intergenic	40.0%
	TAGCCTTCCATGTGAATCTA+TGG	-	contig265end:123149-123168	MsG0080048291.01.T01:intron	40.0%
	TAGGAGTAGATGTAAGTGCT+AGG	-	contig265end:122705-122724	MsG0080048291.01.T01:intron	40.0%
	TCGTTCAATGAGCTATGCTA+AGG	+	contig265end:122889-122908	None:intergenic	40.0%
	TGATCGATGCTCACAATTTC+GGG	-	contig265end:123456-123475	MsG0080048291.01.T01:intron	40.0%
	TGGAAACACCTTCAAAATGC+AGG	-	contig265end:121688-121707	MsG0080048291.01.T01:intron	40.0%
	TGGAAGGCTACATGTTCATT+TGG	+	contig265end:123139-123158	None:intergenic	40.0%
	TTATGGAACTTTGCAGCCAT+TGG	-	contig265end:122785-122804	MsG0080048291.01.T01:intron	40.0%
	TTTGATTGCTGCACTGCTTA+TGG	-	contig265end:122095-122114	MsG0080048291.01.T01:CDS	40.0%
!	AAAGCACACCTGCATTTTGA+AGG	+	contig265end:121699-121718	None:intergenic	40.0%
!	CGTATAATTTGGTTGGCTCA+AGG	-	contig265end:122600-122619	MsG0080048291.01.T01:intron	40.0%
!	CTTCTTATGAAAGGCATGTC+TGG	-	contig265end:121091-121110	MsG0080048291.01.T01:CDS	40.0%
!	GATTTTGCAGGAGCTTAACT+TGG	-	contig265end:121500-121519	MsG0080048291.01.T01:intron	40.0%
!	TTTCTAGAGGTTCGTGTACA+TGG	+	contig265end:123576-123595	None:intergenic	40.0%
!	TTTTGCACAGGAGAAGTTTG+AGG	-	contig265end:123527-123546	MsG0080048291.01.T01:intron	40.0%
!!	ATAACTGTTTGGTTTGGCGT+TGG	+	contig265end:121867-121886	None:intergenic	40.0%
!!	ATATTGGAGGCATTGATGGA+TGG	-	contig265end:122555-122574	MsG0080048291.01.T01:intron	40.0%
!!	CCCATTTTTGCAGGAAAAAG+TGG	-	contig265end:122435-122454	MsG0080048291.01.T01:intron	40.0%
!!	TCTCATATTGGAGGCATTGA+TGG	-	contig265end:122551-122570	MsG0080048291.01.T01:intron	40.0%
!!	TTTGGAACTCTGGAATCTCA+TGG	+	contig265end:122956-122975	None:intergenic	40.0%
!!	TTTTGCAGGAGCTTAACTTG+GGG	-	contig265end:121502-121521	MsG0080048291.01.T01:intron	40.0%
	AAAGACACAAACACCGACAC+AGG	+	contig265end:121190-121209	None:intergenic	45.0%
	AAGACGGCCAAAAATAGCGA+AGG	+	contig265end:122408-122427	None:intergenic	45.0%
	ACCAGCTTCTAGTAAACGTG+CGG	+	contig265end:121780-121799	None:intergenic	45.0%
	AGACGGCCAAAAATAGCGAA+GGG	+	contig265end:122407-122426	None:intergenic	45.0%
	AGAGGAACCTCTTTGTAGGA+TGG	+	contig265end:123766-123785	None:intergenic	45.0%
	CCCCCTACAATGTGCAATAT+AGG	-	contig265end:122365-122384	MsG0080048291.01.T01:intron	45.0%
	CCTCTAGCAGCAGATGTTAA+CGG	+	contig265end:123101-123120	None:intergenic	45.0%
	CGAACATATGACCATCCACT+TGG	+	contig265end:123318-123337	None:intergenic	45.0%
	GAAGGTTCCATCCTACAAAG+AGG	-	contig265end:123756-123775	MsG0080048291.01.T01:CDS	45.0%
	GGAAGCAGTAGAAGAACCAA+TGG	+	contig265end:122804-122823	None:intergenic	45.0%
	GGTCTTCCAAAAGAATGCCT+TGG	+	contig265end:123718-123737	None:intergenic	45.0%
	TAGCAGCAGATGTTAACGGA+TGG	+	contig265end:123097-123116	None:intergenic	45.0%
	TGATACGGTATCCAAGTGGA+TGG	-	contig265end:123304-123323	MsG0080048291.01.T01:intron	45.0%
!	CACTGCAGCATGAACTTTTG+TGG	-	contig265end:121648-121667	MsG0080048291.01.T01:intron	45.0%
!	CTCAATCTAAAACGGCTCCT+AGG	+	contig265end:122303-122322	None:intergenic	45.0%
!	GCAGCATGAACTTTTGTGGA+GGG	-	contig265end:121652-121671	MsG0080048291.01.T01:intron	45.0%
!	GTATGTGTTTGGAATTGCGG+TGG	-	contig265end:121742-121761	MsG0080048291.01.T01:intron	45.0%
!	TGCAGCATGAACTTTTGTGG+AGG	-	contig265end:121651-121670	MsG0080048291.01.T01:intron	45.0%
!	TGGAGGGCTGCTTTGATTAA+TGG	-	contig265end:121668-121687	MsG0080048291.01.T01:intron	45.0%
!!	GAAGCACCAAGGCATTCTTT+TGG	-	contig265end:123709-123728	MsG0080048291.01.T01:CDS	45.0%
!!!	TTCATATTAAATTATTATTT+TGG	+	contig265end:122974-122993	None:intergenic	5.0%
!!!	TTTTTTTAATTTGATTTTAA+TGG	-	contig265end:121604-121623	MsG0080048291.01.T01:intron	5.0%
	ACCGCACGTTTACTAGAAGC+TGG	-	contig265end:121776-121795	MsG0080048291.01.T01:intron	50.0%
	AGCTTCTAGTAAACGTGCGG+TGG	+	contig265end:121777-121796	None:intergenic	50.0%
	CCGTTAACATCTGCTGCTAG+AGG	-	contig265end:123098-123117	MsG0080048291.01.T01:CDS	50.0%
	GAGACATTCTGCTGCGTCAA+AGG	-	contig265end:123549-123568	MsG0080048291.01.T01:intron	50.0%
	GCTTCTAGTAAACGTGCGGT+GGG	+	contig265end:121776-121795	None:intergenic	50.0%
	TTCGACACCGACACATGTGA+TGG	-	contig265end:121133-121152	MsG0080048291.01.T01:CDS	50.0%
!!	TTTTGGAAGACCGTCGCGAA+GGG	-	contig265end:123726-123745	MsG0080048291.01.T01:CDS	50.0%
	CGGCCAAAAATAGCGAAGGG+AGG	+	contig265end:122404-122423	None:intergenic	55.0%
	GATAGTGATGCTTGAGGGGC+TGG	-	contig265end:121390-121409	MsG0080048291.01.T01:intron	55.0%
	GTTTGACCAGGAGACGCGTT+AGG	-	contig265end:122686-122705	MsG0080048291.01.T01:intron	55.0%
	TACTAGATTCTCGCGTCCCC+AGG	+	contig265end:121843-121862	None:intergenic	55.0%
	TCTACTCCTAACGCGTCTCC+TGG	+	contig265end:122695-122714	None:intergenic	55.0%
	TCTAGTAAACGTGCGGTGGG+CGG	+	contig265end:121773-121792	None:intergenic	55.0%
!	GCAGGAGCTTAACTTGGGGA+GGG	-	contig265end:121506-121525	MsG0080048291.01.T01:intron	55.0%
!	TGCAGGAGCTTAACTTGGGG+AGG	-	contig265end:121505-121524	MsG0080048291.01.T01:intron	55.0%
!!	CGAAGGGAGGCCGTTGTTTT+AGG	+	contig265end:122391-122410	None:intergenic	55.0%
!!	CGGCCTCCCTTCGCTATTTT+TGG	-	contig265end:122398-122417	MsG0080048291.01.T01:intron	55.0%
!!	CTTTTGGAAGACCGTCGCGA+AGG	-	contig265end:123725-123744	MsG0080048291.01.T01:CDS	55.0%
	CTAGTAAACGTGCGGTGGGC+GGG	+	contig265end:121772-121791	None:intergenic	60.0%
	TTCTCAGCTGCCCTTCGCGA+CGG	+	contig265end:123739-123758	None:intergenic	60.0%
!!	TGCTTGAGGGGCTGGCTGAA+TGG	-	contig265end:121398-121417	MsG0080048291.01.T01:intron	60.0%
	GTCGCGAAGGGCAGCTGAGA+AGG	-	contig265end:123738-123757	MsG0080048291.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
contig265end	gene	120947	123813	120947	ID=MsG0080048291.01;Name=MsG0080048291.01
contig265end	mRNA	120947	123813	120947	ID=MsG0080048291.01.T01;Parent=MsG0080048291.01;Name=MsG0080048291.01.T01;_AED=0.42;_eAED=0.43;_QI=0\|0\|0\|1\|1\|1\|7\|0\|233
contig265end	exon	123709	123813	123709	ID=MsG0080048291.01.T01:exon:7932;Parent=MsG0080048291.01.T01
contig265end	exon	123227	123250	123227	ID=MsG0080048291.01.T01:exon:7931;Parent=MsG0080048291.01.T01
contig265end	exon	123051	123119	123051	ID=MsG0080048291.01.T01:exon:7930;Parent=MsG0080048291.01.T01
contig265end	exon	122241	122312	122241	ID=MsG0080048291.01.T01:exon:7929;Parent=MsG0080048291.01.T01
contig265end	exon	122045	122138	122045	ID=MsG0080048291.01.T01:exon:7928;Parent=MsG0080048291.01.T01
contig265end	exon	121899	121959	121899	ID=MsG0080048291.01.T01:exon:7927;Parent=MsG0080048291.01.T01
contig265end	exon	120947	121223	120947	ID=MsG0080048291.01.T01:exon:7926;Parent=MsG0080048291.01.T01
contig265end	CDS	123709	123813	123709	ID=MsG0080048291.01.T01:cds;Parent=MsG0080048291.01.T01
contig265end	CDS	123227	123250	123227	ID=MsG0080048291.01.T01:cds;Parent=MsG0080048291.01.T01
contig265end	CDS	123051	123119	123051	ID=MsG0080048291.01.T01:cds;Parent=MsG0080048291.01.T01
contig265end	CDS	122241	122312	122241	ID=MsG0080048291.01.T01:cds;Parent=MsG0080048291.01.T01
contig265end	CDS	122045	122138	122045	ID=MsG0080048291.01.T01:cds;Parent=MsG0080048291.01.T01
contig265end	CDS	121899	121959	121899	ID=MsG0080048291.01.T01:cds;Parent=MsG0080048291.01.T01
contig265end	CDS	120947	121223	120947	ID=MsG0080048291.01.T01:cds;Parent=MsG0080048291.01.T01

Gene Sequence

>MsG0080048291.01.T01

ATGATAGAAAGGAGTGGAGCTGAATTGCAGAGATTGAGAGCTGATATGAAGAAGCTTCAAATGCAAAACTGGAATCTTGCTCAGTCCAATAGTCTCATGTTAGCGGAGCTTAACTTGGGGAGGGATAAAATAAAAACACTGCAGCATGAACTTTTGTGGAGGGCTGCTTTGATTAATGGAAACACCTTCAAAATGCAGGAAAAAGTGGAGATAGACACTGAAAAAGTGGAGATAGACACCGAAAATAATGCATCATTATCACAATTACAGGAAGAAGATGAAAAAGAAGTACAGCAATCCCCGAGAATTAGCAATGATGATGAAAAACAATGTTGTTTGACCAGGAGACGCGTTAGGAGTAGATCCATTGGTTCTTCTACTGCTTCCAGAAAGAATAAAAGCAAAGAAAAGGTTAAAGACAATAGGAGAAGTTTGAGGAGACATTCTGCTGCGTCAAAGGTCCATGTACACGAACCTCTAGAAAACTTGTTTGAAATAGAGGATGCTCAATATGCTATCACTCAATCTGGACATAATAACAAGCTGAGTACTCCATCTGTGAAAACTGAAAGAAGAGAAAGCTCTGGTTTAAGAAATGAAGCACCAAGGCATTCTTTTGGAAGACCGTCGCGAAGGGCAGCTGAGAAGGTTCCATCCTACAAAGAGGTTCCTCTAAATATCAAGATGAGAAGGCTAGCATAA

Protein sequence

>MsG0080048291.01.T01

MIERSGAELQRLRADMKKLQMQNWNLAQSNSLMLAELNLGRDKIKTLQHELLWRAALINGNTFKMQEKVEIDTEKVEIDTENNASLSQLQEEDEKEVQQSPRISNDDEKQCCLTRRRVRSRSIGSSTASRKNKSKEKVKDNRRSLRRHSAASKVHVHEPLENLFEIEDAQYAITQSGHNNKLSTPSVKTERRESSGLRNEAPRHSFGRPSRRAAEKVPSYKEVPLNIKMRRLA*