AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004060.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004060.01.T01 MTR_1g073890 83.881 335 13 5 1 298 1 331 0.0 533
MsG0180004060.01.T01 MTR_1g044135 60.704 341 84 7 1 298 1 334 4.32e-126 373
MsG0180004060.01.T01 MTR_7g063040 42.180 211 115 3 39 242 18 228 4.79e-44 157
MsG0180004060.01.T01 MTR_4g021260 40.088 227 126 3 36 252 9 235 1.34e-43 155
MsG0180004060.01.T01 MTR_1g092540 37.931 203 125 1 36 237 16 218 2.00e-40 149
MsG0180004060.01.T01 MTR_3g091180 35.918 245 133 6 1 242 1 224 2.84e-38 143
MsG0180004060.01.T01 MTR_6g461910 35.458 251 149 5 18 265 10 250 7.40e-38 141
MsG0180004060.01.T01 MTR_0318s0020 32.443 262 149 5 18 259 100 353 2.99e-32 126
MsG0180004060.01.T01 MTR_7g103490 36.788 193 121 1 46 237 29 221 3.31e-28 114
MsG0180004060.01.T01 MTR_1g061540 32.422 256 161 5 28 281 16 261 1.67e-26 109
MsG0180004060.01.T01 MTR_1g096970 33.333 204 126 4 46 242 51 251 4.84e-21 93.6
MsG0180004060.01.T01 MTR_1g025340 31.795 195 120 3 46 232 127 316 1.81e-20 92.0
MsG0180004060.01.T01 MTR_3g114010 30.476 210 133 4 46 247 122 326 4.02e-17 82.4
MsG0180004060.01.T01 MTR_3g097240 29.148 223 151 6 46 264 141 360 2.42e-16 79.3
MsG0180004060.01.T01 MTR_3g097240 29.148 223 151 6 46 264 141 360 2.67e-16 79.3
MsG0180004060.01.T01 MTR_3g097240 29.148 223 151 6 46 264 141 360 4.24e-16 79.3
MsG0180004060.01.T01 MTR_8g095080 30.052 193 126 3 46 232 150 339 1.24e-11 65.5
MsG0180004060.01.T01 MTR_8g095080 30.052 193 126 3 46 232 150 339 1.71e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004060.01.T01 AT3G23160 62.963 243 86 3 1 242 1 240 2.64e-98 300
MsG0180004060.01.T01 AT5G04550 35.294 204 131 1 35 237 14 217 3.50e-39 145
MsG0180004060.01.T01 AT5G04550 35.294 204 131 1 35 237 14 217 3.50e-39 145
MsG0180004060.01.T01 AT5G51670 27.881 269 170 3 1 256 1 258 2.41e-28 114
MsG0180004060.01.T01 AT5G51670 27.881 269 170 3 1 256 1 258 2.41e-28 114
MsG0180004060.01.T01 AT1G34320 32.308 195 121 3 46 232 155 346 2.55e-20 92.0
MsG0180004060.01.T01 AT1G34320 32.308 195 121 3 46 232 155 346 2.55e-20 92.0
MsG0180004060.01.T01 AT1G30755 27.461 193 131 2 46 232 134 323 1.81e-12 68.2
MsG0180004060.01.T01 AT1G30755 27.461 193 131 2 46 232 134 323 1.81e-12 68.2
MsG0180004060.01.T01 AT1G30755 27.461 193 131 2 46 232 134 323 1.97e-12 67.8
MsG0180004060.01.T01 AT1G30755 27.461 193 131 2 46 232 134 323 2.84e-12 67.8
MsG0180004060.01.T01 AT1G30755 27.461 193 131 2 46 232 134 323 2.84e-12 67.8
MsG0180004060.01.T01 AT1G30755 27.461 193 131 2 46 232 134 323 2.84e-12 67.8

Find 111 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAGAGGGTGTTAGGAATT+TGG 0.165683 1:-72663176 MsG0180004060.01.T01:CDS
TAGGAGTTTGTATAGTAAAA+TGG 0.207230 1:-72662915 MsG0180004060.01.T01:CDS
TTTATAAAGTTGAATGGTTT+TGG 0.228524 1:+72663246 None:intergenic
AAAACGTGACGAGCATGTTT+TGG 0.239423 1:-72656742 MsG0180004060.01.T01:three_prime_UTR
TTCCACCCTCCTTGTGTCTC+TGG 0.258933 1:+72656838 None:intergenic
GTGTTGCTGGTGTGGTTTCT+AGG 0.267385 1:-72663090 MsG0180004060.01.T01:CDS
TATGTTCAACTTGAAGATTT+TGG 0.292464 1:-72662458 MsG0180004060.01.T01:CDS
CTCTTCTACTCTCCCCATTC+TGG 0.305632 1:+72662843 None:intergenic
GTAGAAAACATGGTCCTAAA+AGG 0.314812 1:-72663330 MsG0180004060.01.T01:CDS
TCCACCCTCCTTGTGTCTCT+GGG 0.317328 1:+72656839 None:intergenic
GGTTACAATTTGAGTTCAAT+TGG 0.318849 1:-72662536 MsG0180004060.01.T01:CDS
GCTGGTGTGGTTTCTAGGTT+AGG 0.323657 1:-72663085 MsG0180004060.01.T01:CDS
TGTCTCTGGGGTTGACTCCT+TGG 0.334630 1:+72656852 None:intergenic
GGAAGGAATGGTGAGGAAAA+TGG 0.336491 1:-72662957 MsG0180004060.01.T01:CDS
AGGAGTTTGTATAGTAAAAT+GGG 0.339974 1:-72662914 MsG0180004060.01.T01:CDS
TAGAAGAAGTTTCAAGCAAA+AGG 0.354356 1:+72663356 None:intergenic
GTTATAGATGTGAATGAATT+GGG 0.361108 1:-72662998 MsG0180004060.01.T01:CDS
GTTTAATATTTGCACTTACT+TGG 0.364850 1:+72663383 None:intergenic
GTTACAATTTGAGTTCAATT+GGG 0.373341 1:-72662535 MsG0180004060.01.T01:CDS
CATTCCATGAAAAGTCTTCC+AGG 0.373626 1:+72662417 None:intergenic
TCTTGAACTCAGAGGGTGTT+AGG 0.377364 1:-72663183 MsG0180004060.01.T01:CDS
TGTTATAGATGTGAATGAAT+TGG 0.381186 1:-72662999 MsG0180004060.01.T01:CDS
GGTTTGAGCAGAGGCTTGTA+TGG 0.386287 1:-72662820 MsG0180004060.01.T01:CDS
AATAAGAAAGTAGAAACTAT+AGG 0.400565 1:-72663301 MsG0180004060.01.T01:CDS
TGATAAGGTTGTTGAGTTGT+TGG 0.404841 1:-72662744 MsG0180004060.01.T01:CDS
GAGGAATTGAACCGTGTTGC+TGG 0.417423 1:-72663103 MsG0180004060.01.T01:CDS
TTCAGAATAATAGCCAGAAT+GGG 0.425837 1:-72662856 MsG0180004060.01.T01:CDS
AATCTGAGATAGCAAAGTTA+AGG 0.437201 1:-72663213 MsG0180004060.01.T01:CDS
CAATGATTTATAAAGTTGAA+TGG 0.441919 1:+72663240 None:intergenic
TTTCAGAATAATAGCCAGAA+TGG 0.444882 1:-72662857 MsG0180004060.01.T01:CDS
GCAAGATGTGAGGCAGCTTA+AGG 0.445171 1:-72662792 MsG0180004060.01.T01:CDS
TGTTCTGTGCCTGCTTTGCA+AGG 0.446637 1:-72663055 MsG0180004060.01.T01:CDS
AGAAGAAGTTTCAAGCAAAA+GGG 0.448546 1:+72663357 None:intergenic
TGCTCAAACCCTTGCAAAGC+AGG 0.449040 1:+72663046 None:intergenic
CTGGTGTGGTTTCTAGGTTA+GGG 0.450011 1:-72663084 MsG0180004060.01.T01:CDS
TACAGTGAGGAAGGATGCCT+TGG 0.451961 1:-72662674 MsG0180004060.01.T01:CDS
TTTCCTTGTGGAACAAGTCC+TGG 0.453150 1:-72662435 MsG0180004060.01.T01:CDS
TAGCTATGGTTGCTGAAGCT+TGG 0.455269 1:-72663423 None:intergenic
AACCTCAGAGGTTGAAGGTT+CGG 0.460747 1:-72656925 MsG0180004060.01.T01:three_prime_UTR
TGCAAGAATCTGTAGGTCTT+TGG 0.464707 1:-72662702 MsG0180004060.01.T01:CDS
AAGAGGTCTCAAGGATCAAC+TGG 0.465606 1:-72656885 MsG0180004060.01.T01:three_prime_UTR
ACGCAGTCATAGCAGAAAAC+TGG 0.466483 1:-72662557 MsG0180004060.01.T01:intron
CAAGGGTTTGAGCATGTGTA+TGG 0.470411 1:-72663037 MsG0180004060.01.T01:CDS
CAGAATGGGGAGAGTAGAAG+AGG 0.480582 1:-72662842 MsG0180004060.01.T01:CDS
GGGGAAATGGTAGTAGTAGT+AGG 0.496717 1:-72662514 MsG0180004060.01.T01:CDS
AGTTAAGCATATGGAAGGAA+TGG 0.497345 1:-72662969 MsG0180004060.01.T01:CDS
GAGGAAGGATGCCTTGGGAT+TGG 0.500783 1:-72662668 MsG0180004060.01.T01:CDS
GTGTATGGTGATATTGTTAG+TGG 0.502554 1:-72663022 MsG0180004060.01.T01:CDS
CATATCGATCCACTAGAACT+TGG 0.503864 1:+72656712 None:intergenic
ACCTACAGATTCTTGCATAC+AGG 0.509294 1:+72662708 None:intergenic
TGTCTTGATGTAACGTTAAG+AGG 0.510497 1:-72656902 MsG0180004060.01.T01:three_prime_UTR
AAACGTCCAACGCTCGATGA+GGG 0.513118 1:-72656803 MsG0180004060.01.T01:three_prime_UTR
CAAGGAGGGTGGAATACGTC+TGG 0.529126 1:-72656829 MsG0180004060.01.T01:three_prime_UTR
AATTTGGTTTCTTCAGAAGA+GGG 0.530169 1:-72663160 MsG0180004060.01.T01:CDS
ATAGGTATGTGAGTGCTACT+AGG 0.530403 1:-72662934 MsG0180004060.01.T01:CDS
ACAGTGAGGAAGGATGCCTT+GGG 0.533422 1:-72662673 MsG0180004060.01.T01:CDS
GTAGAAGAGGGTTTGAGCAG+AGG 0.533791 1:-72662829 MsG0180004060.01.T01:CDS
TTGGTGATTTACAGTGAGGA+AGG 0.537636 1:-72662683 MsG0180004060.01.T01:CDS
GGGAGAACACCAAGTTCTAG+TGG 0.539275 1:-72656721 None:intergenic
GTTCTGTGCCTGCTTTGCAA+GGG 0.544878 1:-72663054 MsG0180004060.01.T01:CDS
TTACAATTTGAGTTCAATTG+GGG 0.555673 1:-72662534 MsG0180004060.01.T01:CDS
ATTGAACCGTGTTGCTGGTG+TGG 0.556958 1:-72663098 MsG0180004060.01.T01:CDS
GAATTTGGTTTCTTCAGAAG+AGG 0.557080 1:-72663161 MsG0180004060.01.T01:CDS
ATTGTGTAGATTTGAAGCAA+TGG 0.563345 1:-72656987 MsG0180004060.01.T01:intron
AGGGGAGGGTATCACTCACT+TGG 0.563422 1:-72656784 MsG0180004060.01.T01:three_prime_UTR
GGAGTTTGTATAGTAAAATG+GGG 0.565248 1:-72662913 MsG0180004060.01.T01:CDS
AACGTCCAACGCTCGATGAG+GGG 0.568059 1:-72656802 MsG0180004060.01.T01:three_prime_UTR
TGTAGATTTGAAGCAATGGC+CGG 0.571601 1:-72656983 MsG0180004060.01.T01:intron
CGGAGAACCTCAGAGGTTGA+AGG 0.572165 1:-72656930 MsG0180004060.01.T01:three_prime_UTR
GAGTTTGTATAGTAAAATGG+GGG 0.573559 1:-72662912 MsG0180004060.01.T01:CDS
TAAACGTCCAACGCTCGATG+AGG 0.581289 1:-72656804 MsG0180004060.01.T01:three_prime_UTR
TCCAACGCTCGATGAGGGGA+GGG 0.582415 1:-72656798 MsG0180004060.01.T01:three_prime_UTR
TTATAGATGTGAATGAATTG+GGG 0.583468 1:-72662997 MsG0180004060.01.T01:CDS
CCTTGGGATTGGTAATTGTG+AGG 0.584576 1:-72662657 MsG0180004060.01.T01:intron
ACCCTCCCCTCATCGAGCGT+TGG 0.585268 1:+72656797 None:intergenic
GAATGGTGAGGAAAATGGAT+AGG 0.586857 1:-72662952 MsG0180004060.01.T01:CDS
AATGAGATCTTGAACTCAGA+GGG 0.592154 1:-72663190 MsG0180004060.01.T01:CDS
GTCCAACGCTCGATGAGGGG+AGG 0.592389 1:-72656799 MsG0180004060.01.T01:three_prime_UTR
TGTAACGTTAAGAGGTCTCA+AGG 0.600800 1:-72656894 MsG0180004060.01.T01:three_prime_UTR
AGGTTGTTGAGTTGTTGGCT+AGG 0.602958 1:-72662739 MsG0180004060.01.T01:CDS
CCACCCTCCTTGTGTCTCTG+GGG 0.604178 1:+72656840 None:intergenic
AGCTTAAGGAGATTTCACTT+TGG 0.607378 1:-72662778 MsG0180004060.01.T01:CDS
GAGGGTATCACTCACTTGGG+TGG 0.613997 1:-72656780 MsG0180004060.01.T01:three_prime_UTR
GAGTCAACCCCAGAGACACA+AGG 0.616192 1:-72656847 MsG0180004060.01.T01:three_prime_UTR
CCCCAGAGACACAAGGAGGG+TGG 0.616902 1:-72656840 MsG0180004060.01.T01:three_prime_UTR
GTAGATTTGAAGCAATGGCC+GGG 0.623828 1:-72656982 MsG0180004060.01.T01:intron
CTTCCAGGACTTGTTCCACA+AGG 0.627608 1:+72662432 None:intergenic
TGCATGAACGTCGATCCACC+CGG 0.632107 1:+72656964 None:intergenic
GACGTTCATGCAGAATTCAA+CGG 0.633403 1:-72656953 MsG0180004060.01.T01:three_prime_UTR
GTCTTTGGTGATTTACAGTG+AGG 0.643236 1:-72662687 MsG0180004060.01.T01:CDS
TCTTCTACTAGTAGAAAACA+TGG 0.643423 1:-72663340 MsG0180004060.01.T01:CDS
AGCATATGGAAGGAATGGTG+AGG 0.646265 1:-72662964 MsG0180004060.01.T01:CDS
ACCTGTATGCAAGAATCTGT+AGG 0.654694 1:-72662709 MsG0180004060.01.T01:CDS
GGGGAGGGTATCACTCACTT+GGG 0.655014 1:-72656783 MsG0180004060.01.T01:three_prime_UTR
TACAATTTGAGTTCAATTGG+GGG 0.659607 1:-72662533 MsG0180004060.01.T01:CDS
AGTTTGTATAGTAAAATGGG+GGG 0.660331 1:-72662911 MsG0180004060.01.T01:CDS
CCTCACAATTACCAATCCCA+AGG 0.660437 1:+72662657 None:intergenic
CACCGAACCTTCAACCTCTG+AGG 0.664090 1:+72656923 None:intergenic
AGAATGGGGAGAGTAGAAGA+GGG 0.664493 1:-72662841 MsG0180004060.01.T01:CDS
TCTCATATAGATATGAAGAG+AGG 0.666893 1:-72662491 MsG0180004060.01.T01:CDS
TCAGAATAATAGCCAGAATG+GGG 0.670464 1:-72662855 MsG0180004060.01.T01:CDS
CAACTGGATGAATTTAACCA+AGG 0.675091 1:-72656869 MsG0180004060.01.T01:three_prime_UTR
TAGAAACCACACCAGCAACA+CGG 0.680939 1:+72663092 None:intergenic
GAATGAGATCTTGAACTCAG+AGG 0.696161 1:-72663191 MsG0180004060.01.T01:CDS
TGTTCGACGTGAGAAGCTCG+AGG 0.696638 1:-72663122 MsG0180004060.01.T01:CDS
CAACCCCAGAGACACAAGGA+GGG 0.700725 1:-72656843 MsG0180004060.01.T01:three_prime_UTR
GATTTGAAGCAATGGCCGGG+TGG 0.705473 1:-72656979 MsG0180004060.01.T01:three_prime_UTR
TATGGCAGAAGCAAGATGTG+AGG 0.708787 1:-72662802 MsG0180004060.01.T01:CDS
TCAACGGCGGAGAACCTCAG+AGG 0.709305 1:-72656937 MsG0180004060.01.T01:three_prime_UTR
TCAACCCCAGAGACACAAGG+AGG 0.738703 1:-72656844 MsG0180004060.01.T01:three_prime_UTR
GTTCATGCAGAATTCAACGG+CGG 0.781150 1:-72656950 MsG0180004060.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTATTTTAATAAAAA+TGG - Chr1:72661629-72661648 MsG0180004060.01.T01:intron 0.0%
!! TTTATTGAAAAATATATCAT+AGG + Chr1:72661866-72661885 None:intergenic 10.0%
!!! AAGCTATATTTTTTATAAAA+TGG - Chr1:72658619-72658638 MsG0180004060.01.T01:intron 10.0%
!!! AGAGTTTTTTTTTTTTTTTT+TGG - Chr1:72662281-72662300 MsG0180004060.01.T01:intron 10.0%
!!! AGCTATATTTTTTATAAAAT+GGG - Chr1:72658620-72658639 MsG0180004060.01.T01:intron 10.0%
!!! AGTTTTTTTTTTTTTTTTTG+GGG - Chr1:72662283-72662302 MsG0180004060.01.T01:intron 10.0%
!!! ATGTTTAATGTATAATTTTT+AGG - Chr1:72663055-72663074 MsG0180004060.01.T01:CDS 10.0%
!!! ATTCTAAATAATGATTTTTT+GGG - Chr1:72659555-72659574 MsG0180004060.01.T01:intron 10.0%
!!! GAGTTTTTTTTTTTTTTTTT+GGG - Chr1:72662282-72662301 MsG0180004060.01.T01:intron 10.0%
!!! TATTTTAATAAAAATGGTTA+AGG - Chr1:72661635-72661654 MsG0180004060.01.T01:intron 10.0%
!!! TGTTTAATGTATAATTTTTA+GGG - Chr1:72663056-72663075 MsG0180004060.01.T01:CDS 10.0%
!! AAAATTTAGATATTGAGTTA+AGG - Chr1:72659426-72659445 MsG0180004060.01.T01:intron 15.0%
!! ATCTAACATGTAAAAATAAA+AGG + Chr1:72662767-72662786 None:intergenic 15.0%
!! GATTATTTGTAATTAAATCA+AGG - Chr1:72661507-72661526 MsG0180004060.01.T01:intron 15.0%
!! TAAATGTAAATCAATAATTG+TGG - Chr1:72659581-72659600 MsG0180004060.01.T01:intron 15.0%
!! TAATCAAAATAATATGTACA+TGG - Chr1:72661906-72661925 MsG0180004060.01.T01:intron 15.0%
!! TAATTTATAAATGATGCATA+TGG + Chr1:72661731-72661750 None:intergenic 15.0%
!! TTTCTCTTAAAAAATAGAAA+TGG + Chr1:72661827-72661846 None:intergenic 15.0%
!!! AAATATTGAATTGATAACAA+AGG - Chr1:72661091-72661110 MsG0180004060.01.T01:intron 15.0%
!!! AAGTACAATATAATTTCTTT+TGG + Chr1:72660730-72660749 None:intergenic 15.0%
!!! ACTCAATATCTAAATTTTAA+AGG + Chr1:72659424-72659443 None:intergenic 15.0%
!!! AGAGAATTTTTTTAGAATTA+GGG - Chr1:72662940-72662959 MsG0180004060.01.T01:CDS 15.0%
!!! AGTACAATATAATTTCTTTT+GGG + Chr1:72660729-72660748 None:intergenic 15.0%
!!! ATCATTATTTAGAATCTTAT+AGG + Chr1:72659550-72659569 None:intergenic 15.0%
!!! GATTCTAAATAATGATTTTT+TGG - Chr1:72659554-72659573 MsG0180004060.01.T01:intron 15.0%
!!! GTTTTTTTTTTTTTTTTTGG+GGG - Chr1:72662284-72662303 MsG0180004060.01.T01:intron 15.0%
!!! TAGAGAATTTTTTTAGAATT+AGG - Chr1:72662939-72662958 MsG0180004060.01.T01:CDS 15.0%
!!! TCATTATTTAGAATCTTATA+GGG + Chr1:72659549-72659568 None:intergenic 15.0%
!!! TGTACATATTATTTTGATTA+TGG + Chr1:72661906-72661925 None:intergenic 15.0%
!!! TTTCAATGTTTTAAGATTTT+AGG - Chr1:72661124-72661143 MsG0180004060.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTTTTTGGG+GGG - Chr1:72662285-72662304 MsG0180004060.01.T01:intron 15.0%
!! AAAAACACGTTGAAATATTT+CGG + Chr1:72660177-72660196 None:intergenic 20.0%
!! AAATTATAATTTGATTGCCA+AGG + Chr1:72660535-72660554 None:intergenic 20.0%
!! AATAAGAAAGTAGAAACTAT+AGG - Chr1:72656841-72656860 MsG0180004060.01.T01:three_prime_UTR 20.0%
!! AATAATTACCCTAATAAAGT+TGG - Chr1:72660939-72660958 MsG0180004060.01.T01:intron 20.0%
!! ATGGAATTGAAAATTTGAAT+TGG + Chr1:72661474-72661493 None:intergenic 20.0%
!! ATTCTATAATGAATGAATGA+GGG + Chr1:72661166-72661185 None:intergenic 20.0%
!! CAAAGAAAGATTGATTAATT+GGG - Chr1:72660292-72660311 MsG0180004060.01.T01:intron 20.0%
!! CAATGATTTATAAAGTTGAA+TGG + Chr1:72656905-72656924 None:intergenic 20.0%
!! GAGAATAAATTTATTAGCAT+TGG - Chr1:72662162-72662181 MsG0180004060.01.T01:intron 20.0%
!! TATTCTATAATGAATGAATG+AGG + Chr1:72661167-72661186 None:intergenic 20.0%
!! TCAAAGAAAGATTGATTAAT+TGG - Chr1:72660291-72660310 MsG0180004060.01.T01:intron 20.0%
!! TGAAAAATATATCATAGGAA+AGG + Chr1:72661861-72661880 None:intergenic 20.0%
!! TGTCTAAGAACATATTTATT+AGG - Chr1:72660096-72660115 MsG0180004060.01.T01:intron 20.0%
!! TTAAAAAAAGAGTCCAAATA+TGG - Chr1:72661548-72661567 MsG0180004060.01.T01:intron 20.0%
!! TTACAAATAATCCAGTAAAA+AGG + Chr1:72661499-72661518 None:intergenic 20.0%
!! TTATTTAAAGAGTCCATATT+TGG + Chr1:72661564-72661583 None:intergenic 20.0%
!!! AATTTTCTGAATTGTAATGA+AGG - Chr1:72662033-72662052 MsG0180004060.01.T01:intron 20.0%
!!! ATTTGAACTTGAAGAAATTT+TGG + Chr1:72662695-72662714 None:intergenic 20.0%
!!! ATTTTCAAAAGTTGTTTAGT+GGG - Chr1:72661972-72661991 MsG0180004060.01.T01:intron 20.0%
!!! CATATTCTTTTTGAATATGT+CGG - Chr1:72662224-72662243 MsG0180004060.01.T01:intron 20.0%
!!! GTTCATTATATTTGTTTTCT+CGG - Chr1:72661326-72661345 MsG0180004060.01.T01:intron 20.0%
!!! TATTTTCAAAAGTTGTTTAG+TGG - Chr1:72661971-72661990 MsG0180004060.01.T01:intron 20.0%
!!! TGTAGAGTTTGTTTAAATTT+TGG - Chr1:72662816-72662835 MsG0180004060.01.T01:CDS 20.0%
!!! TGTTTAAATTTTGGTGTTTT+TGG - Chr1:72662825-72662844 MsG0180004060.01.T01:CDS 20.0%
!!! TTCATTATATTTGTTTTCTC+GGG - Chr1:72661327-72661346 MsG0180004060.01.T01:intron 20.0%
!!! TTGCACAAAAATATTGTTTT+GGG - Chr1:72659357-72659376 MsG0180004060.01.T01:intron 20.0%
!!! TTTATAAAGTTGAATGGTTT+TGG + Chr1:72656899-72656918 None:intergenic 20.0%
!!! TTTGCACAAAAATATTGTTT+TGG - Chr1:72659356-72659375 MsG0180004060.01.T01:intron 20.0%
!!! TTTTTTTTTTTTTTTTGGGG+GGG - Chr1:72662286-72662305 MsG0180004060.01.T01:intron 20.0%
! AAAAAAAAGTAATGACCTGT+TGG - Chr1:72661022-72661041 MsG0180004060.01.T01:intron 25.0%
! AAAACATGACACGAAAAATA+AGG - Chr1:72661790-72661809 MsG0180004060.01.T01:intron 25.0%
! AAATCAAGGTGAATGTAATA+TGG - Chr1:72661521-72661540 MsG0180004060.01.T01:intron 25.0%
! AACTCAAACTATTGCTAATT+AGG - Chr1:72660622-72660641 MsG0180004060.01.T01:intron 25.0%
! AATTTCCAAAGAGAAGATTT+AGG - Chr1:72662357-72662376 MsG0180004060.01.T01:intron 25.0%
! AGGAGTTTGTATAGTAAAAT+GGG - Chr1:72657228-72657247 MsG0180004060.01.T01:intron 25.0%
! ATAGCAGTAAAATTGATTGA+AGG + Chr1:72659003-72659022 None:intergenic 25.0%
! ATTATAGGGTGAGAAAATAA+AGG - Chr1:72660253-72660272 MsG0180004060.01.T01:intron 25.0%
! CTTCTAATTATGTTTATGTG+CGG - Chr1:72658662-72658681 MsG0180004060.01.T01:intron 25.0%
! GACATATACAAACATGAAAT+TGG + Chr1:72661416-72661435 None:intergenic 25.0%
! GTTATAGATGTGAATGAATT+GGG - Chr1:72657144-72657163 MsG0180004060.01.T01:intron 25.0%
! GTTTAATATTTGCACTTACT+TGG + Chr1:72656762-72656781 None:intergenic 25.0%
! TAAGACATATGTCAAGAATT+TGG - Chr1:72658085-72658104 MsG0180004060.01.T01:intron 25.0%
! TAATTTGACACTTTGTCATT+TGG + Chr1:72660832-72660851 None:intergenic 25.0%
! TAGGAGTTTGTATAGTAAAA+TGG - Chr1:72657227-72657246 MsG0180004060.01.T01:intron 25.0%
! TATATGCTAGAAGAGATAAA+AGG - Chr1:72659515-72659534 MsG0180004060.01.T01:intron 25.0%
! TCATGGATCATAAATAAATG+TGG + Chr1:72659685-72659704 None:intergenic 25.0%
! TCATTCATTATAGAATAGAC+AGG - Chr1:72661170-72661189 MsG0180004060.01.T01:intron 25.0%
! TGAATTATAATCCTTCCATA+AGG - Chr1:72658770-72658789 MsG0180004060.01.T01:intron 25.0%
! TGGAAATATTGTCAAGAAAA+AGG - Chr1:72657853-72657872 MsG0180004060.01.T01:intron 25.0%
! TGTTATAGATGTGAATGAAT+TGG - Chr1:72657143-72657162 MsG0180004060.01.T01:intron 25.0%
! TTATAGATGTGAATGAATTG+GGG - Chr1:72657145-72657164 MsG0180004060.01.T01:intron 25.0%
! TTTGGATGTACGATAAATTA+AGG + Chr1:72658484-72658503 None:intergenic 25.0%
!! AAATTTCTTCTCATTTCTAG+CGG - Chr1:72660796-72660815 MsG0180004060.01.T01:intron 25.0%
!! AACATAATTAGAAGTACAGT+AGG + Chr1:72658656-72658675 None:intergenic 25.0%
!! AACTTATGTTTAGAATGAAG+TGG - Chr1:72658924-72658943 MsG0180004060.01.T01:intron 25.0%
!! AATTAGCAATAGTTTGAGTT+TGG + Chr1:72660622-72660641 None:intergenic 25.0%
!! AATTTGACACTTTGTCATTT+GGG + Chr1:72660831-72660850 None:intergenic 25.0%
!! ACTTGAAGAAATTTTGGATT+TGG + Chr1:72662689-72662708 None:intergenic 25.0%
!! AGGTCTTTTGTTCAAATATT+TGG - Chr1:72662056-72662075 MsG0180004060.01.T01:intron 25.0%
!! ATCAATTGTCATCTTCATTT+TGG + Chr1:72662426-72662445 None:intergenic 25.0%
!! CTAGCATAAAAGACAAATTT+TGG + Chr1:72660492-72660511 None:intergenic 25.0%
!! CTTGAAGAAATTTTGGATTT+GGG + Chr1:72662688-72662707 None:intergenic 25.0%
!! CTTTACAGTTACATATTTTG+TGG + Chr1:72659256-72659275 None:intergenic 25.0%
!! CTTTATTTACTAGAAAAACC+AGG - Chr1:72661767-72661786 MsG0180004060.01.T01:intron 25.0%
!! GAAATATTTCAACGTGTTTT+TGG - Chr1:72660176-72660195 MsG0180004060.01.T01:intron 25.0%
!! GGTCTTTTGTTCAAATATTT+GGG - Chr1:72662057-72662076 MsG0180004060.01.T01:intron 25.0%
!! GTCTTTTGTTCAAATATTTG+GGG - Chr1:72662058-72662077 MsG0180004060.01.T01:intron 25.0%
!! GTTACAATTTGAGTTCAATT+GGG - Chr1:72657607-72657626 MsG0180004060.01.T01:intron 25.0%
!! TATGTTCAACTTGAAGATTT+TGG - Chr1:72657684-72657703 MsG0180004060.01.T01:intron 25.0%
!! TGTTTAAAATGCAGATTTCA+CGG - Chr1:72659197-72659216 MsG0180004060.01.T01:intron 25.0%
!! TTACAATTTGAGTTCAATTG+GGG - Chr1:72657608-72657627 MsG0180004060.01.T01:intron 25.0%
!! TTCTTATTCTCTTTCCTTTT+AGG + Chr1:72656829-72656848 None:intergenic 25.0%
!! TTTTCAAAAGTTGTTTAGTG+GGG - Chr1:72661973-72661992 MsG0180004060.01.T01:intron 25.0%
!! TTTTTATGGACCTCTAAATA+AGG + Chr1:72659121-72659140 None:intergenic 25.0%
!!! AGAGATTTTCGAGATTTTTT+TGG + Chr1:72662656-72662675 None:intergenic 25.0%
!!! ATTAGTTTGTACATTAATCG+AGG - Chr1:72658528-72658547 MsG0180004060.01.T01:intron 25.0%
!!! CAATGTTTTAAGATTTTAGG+TGG - Chr1:72661127-72661146 MsG0180004060.01.T01:intron 25.0%
!!! CTGGTTTTTCTAGTAAATAA+AGG + Chr1:72661769-72661788 None:intergenic 25.0%
!!! GAGAAGAAATTTTAGAGTTT+GGG + Chr1:72660788-72660807 None:intergenic 25.0%
!!! GTTCACATTTGAAACTTTTT+AGG - Chr1:72661657-72661676 MsG0180004060.01.T01:intron 25.0%
!!! TGAGAAGAAATTTTAGAGTT+TGG + Chr1:72660789-72660808 None:intergenic 25.0%
!!! TTTTTAGTTAAGCATATGGA+AGG - Chr1:72657168-72657187 MsG0180004060.01.T01:intron 25.0%
AAAGATAACCTTAAGCTAGT+TGG + Chr1:72658053-72658072 None:intergenic 30.0%
AAATCAATGGAATCATGAAC+CGG + Chr1:72658816-72658835 None:intergenic 30.0%
AACTGTAAAGACAAATAGTC+TGG - Chr1:72659266-72659285 MsG0180004060.01.T01:intron 30.0%
AAGTAAATGAAAACTGAGAG+TGG + Chr1:72659880-72659899 None:intergenic 30.0%
AATCAAATGAACATGTGATG+TGG - Chr1:72659942-72659961 MsG0180004060.01.T01:intron 30.0%
AATGTGCTCTCTAATTAAGA+GGG + Chr1:72658874-72658893 None:intergenic 30.0%
ACAATATTTCCAATCCCAAT+AGG + Chr1:72657845-72657864 None:intergenic 30.0%
AGAACGCATGAGAATATTAT+AGG - Chr1:72660238-72660257 MsG0180004060.01.T01:intron 30.0%
AGAAGAAGTTTCAAGCAAAA+GGG + Chr1:72656788-72656807 None:intergenic 30.0%
AGTTGAAGACCAACTTTATT+AGG + Chr1:72660951-72660970 None:intergenic 30.0%
AGTTTGTATAGTAAAATGGG+GGG - Chr1:72657231-72657250 MsG0180004060.01.T01:intron 30.0%
ATAATCCAGTAAAAAGGCAA+TGG + Chr1:72661493-72661512 None:intergenic 30.0%
ATGATCCATGAAATGAAATC+TGG - Chr1:72659694-72659713 MsG0180004060.01.T01:intron 30.0%
ATGTGATGTAGTAAGATTGA+AGG + Chr1:72659995-72660014 None:intergenic 30.0%
ATTCTCACTTAAAATCCAAC+AGG + Chr1:72661040-72661059 None:intergenic 30.0%
ATTGGACTTATACTTGTAGT+TGG + Chr1:72661456-72661475 None:intergenic 30.0%
ATTTGGAAGATTGCATGAAA+TGG - Chr1:72658384-72658403 MsG0180004060.01.T01:intron 30.0%
CAAACATTTCATCAAACACT+TGG + Chr1:72663101-72663120 None:intergenic 30.0%
CAAATGTAAATTGTGCTACA+AGG - Chr1:72659391-72659410 MsG0180004060.01.T01:intron 30.0%
CCATAAAAACTAGGTCATTT+CGG - Chr1:72659132-72659151 MsG0180004060.01.T01:intron 30.0%
CTTGACATATGTCTTAAGTT+TGG + Chr1:72658081-72658100 None:intergenic 30.0%
GAAAATATCACTTTCAAACC+CGG + Chr1:72661958-72661977 None:intergenic 30.0%
GAACGCATGAGAATATTATA+GGG - Chr1:72660239-72660258 MsG0180004060.01.T01:intron 30.0%
GAGTTTGTATAGTAAAATGG+GGG - Chr1:72657230-72657249 MsG0180004060.01.T01:intron 30.0%
GCAAGAAATCATACAATGTT+GGG - Chr1:72662847-72662866 MsG0180004060.01.T01:CDS 30.0%
GCTATATGTGAACTTCTTAA+AGG - Chr1:72658296-72658315 MsG0180004060.01.T01:intron 30.0%
GGAGTTTGTATAGTAAAATG+GGG - Chr1:72657229-72657248 MsG0180004060.01.T01:intron 30.0%
GTAATAGGAGTGATCAATTT+GGG - Chr1:72662393-72662412 MsG0180004060.01.T01:intron 30.0%
GTTGAAGACCAACTTTATTA+GGG + Chr1:72660950-72660969 None:intergenic 30.0%
TAATGTTGAGGTGAATTTGT+CGG - Chr1:72657553-72657572 MsG0180004060.01.T01:intron 30.0%
TACAAATTCAATAGTGTCAG+TGG - Chr1:72659720-72659739 MsG0180004060.01.T01:intron 30.0%
TAGAACTAATGCAGAATAGA+AGG + Chr1:72660996-72661015 None:intergenic 30.0%
TAGAAGAAGTTTCAAGCAAA+AGG + Chr1:72656789-72656808 None:intergenic 30.0%
TAGCTTAAGGTTATCTTTGA+AGG - Chr1:72658055-72658074 MsG0180004060.01.T01:intron 30.0%
TCTCATATAGATATGAAGAG+AGG - Chr1:72657651-72657670 MsG0180004060.01.T01:intron 30.0%
TCTTCTACTAGTAGAAAACA+TGG - Chr1:72656802-72656821 MsG0180004060.01.T01:three_prime_UTR 30.0%
TGTAATAGGAGTGATCAATT+TGG - Chr1:72662392-72662411 MsG0180004060.01.T01:intron 30.0%
TTCAGAATAATAGCCAGAAT+GGG - Chr1:72657286-72657305 MsG0180004060.01.T01:intron 30.0%
TTGCTAATTAGGTATGAACA+TGG - Chr1:72660633-72660652 MsG0180004060.01.T01:intron 30.0%
TTTACTCATTCATAGACGAT+GGG + Chr1:72661073-72661092 None:intergenic 30.0%
TTTAGAGGTCCATAAAAACT+AGG - Chr1:72659123-72659142 MsG0180004060.01.T01:intron 30.0%
TTTCAAAAGTTGTTTAGTGG+GGG - Chr1:72661974-72661993 MsG0180004060.01.T01:intron 30.0%
TTTCAGAATAATAGCCAGAA+TGG - Chr1:72657285-72657304 MsG0180004060.01.T01:intron 30.0%
TTTCTGAATTGTAATGAAGG+AGG - Chr1:72662036-72662055 MsG0180004060.01.T01:intron 30.0%
TTTGATCTTGAAGCCATAAA+CGG - Chr1:72660553-72660572 MsG0180004060.01.T01:intron 30.0%
! AAATAGAAATGGTAATGTCG+TGG + Chr1:72661816-72661835 None:intergenic 30.0%
! AAATATTTGGGGTTATCGAT+GGG - Chr1:72662069-72662088 MsG0180004060.01.T01:intron 30.0%
! AAATGAAAGATTGCCGTTTA+TGG + Chr1:72660569-72660588 None:intergenic 30.0%
! AATCTGAGATAGCAAAGTTA+AGG - Chr1:72656929-72656948 MsG0180004060.01.T01:three_prime_UTR 30.0%
! AATTTGGTTTCTTCAGAAGA+GGG - Chr1:72656982-72657001 MsG0180004060.01.T01:intron 30.0%
! ATTGTGTAGATTTGAAGCAA+TGG - Chr1:72663155-72663174 MsG0180004060.01.T01:CDS 30.0%
! ATTTTAGATGAGAAATGAGG+TGG + Chr1:72662633-72662652 None:intergenic 30.0%
! GACAAATTTTGGATCAATCA+AGG + Chr1:72660481-72660500 None:intergenic 30.0%
! GGTTACAATTTGAGTTCAAT+TGG - Chr1:72657606-72657625 MsG0180004060.01.T01:intron 30.0%
! GTTTAAAATGCAGATTTCAC+GGG - Chr1:72659198-72659217 MsG0180004060.01.T01:intron 30.0%
! TACAATTTGAGTTCAATTGG+GGG - Chr1:72657609-72657628 MsG0180004060.01.T01:intron 30.0%
! TACTTAGCTTTCCACATTAA+TGG - Chr1:72657993-72658012 MsG0180004060.01.T01:intron 30.0%
! TGGATTTTAGATGAGAAATG+AGG + Chr1:72662636-72662655 None:intergenic 30.0%
! TTGAGTTAAGGTTTTCTTTC+TGG - Chr1:72659438-72659457 MsG0180004060.01.T01:intron 30.0%
! TTGGAATCAGACTTTTGATA+AGG - Chr1:72657383-72657402 MsG0180004060.01.T01:intron 30.0%
! TTTAAAATGCAGATTTCACG+GGG - Chr1:72659199-72659218 MsG0180004060.01.T01:intron 30.0%
! TTTCAAGTAGATAGATTCCT+TGG + Chr1:72662102-72662121 None:intergenic 30.0%
! TTTTACTCATTCATAGACGA+TGG + Chr1:72661074-72661093 None:intergenic 30.0%
!! ATTCCATTGATTTGCTTAAG+CGG - Chr1:72658823-72658842 MsG0180004060.01.T01:intron 30.0%
!! TAAGATTTTAGGTGGAAATG+TGG - Chr1:72661135-72661154 MsG0180004060.01.T01:intron 30.0%
!! TGGTGTCAAAATGATACTTT+TGG + Chr1:72658502-72658521 None:intergenic 30.0%
!! TGTTGGATTTTAAGTGAGAA+TGG - Chr1:72661039-72661058 MsG0180004060.01.T01:intron 30.0%
!!! AGAAATTTTAGAGTTTGGGA+AGG + Chr1:72660784-72660803 None:intergenic 30.0%
!!! ATATTGTTTTGGGAGATACT+TGG - Chr1:72659367-72659386 MsG0180004060.01.T01:intron 30.0%
!!! ATATTTCAACGTGTTTTTGG+AGG - Chr1:72660179-72660198 MsG0180004060.01.T01:intron 30.0%
!!! GAAATTTTAGAGTTTGGGAA+GGG + Chr1:72660783-72660802 None:intergenic 30.0%
!!! GTGTTTTTGGAGGTTTTATA+CGG - Chr1:72660189-72660208 MsG0180004060.01.T01:intron 30.0%
!!! TATTGTTTTGGGAGATACTT+GGG - Chr1:72659368-72659387 MsG0180004060.01.T01:intron 30.0%
!!! TTAAGGTTTTCTTTCTGGTT+TGG - Chr1:72659443-72659462 MsG0180004060.01.T01:intron 30.0%
AATGAGATCTTGAACTCAGA+GGG - Chr1:72656952-72656971 MsG0180004060.01.T01:three_prime_UTR 35.0%
ACAACAACAAAACGCATTAC+TGG - Chr1:72658343-72658362 MsG0180004060.01.T01:intron 35.0%
ACTAATGCAGAATAGAAGGT+TGG + Chr1:72660992-72661011 None:intergenic 35.0%
AGAATCTTAGACCTTATGGA+AGG + Chr1:72658784-72658803 None:intergenic 35.0%
AGAATTCCTTCCTTGTATTG+TGG - Chr1:72661228-72661247 MsG0180004060.01.T01:intron 35.0%
AGATATTGTAATCCTCAGTG+TGG - Chr1:72658449-72658468 MsG0180004060.01.T01:intron 35.0%
AGCTTAAGGAGATTTCACTT+TGG - Chr1:72657364-72657383 MsG0180004060.01.T01:intron 35.0%
AGGGCATGCAATAAACTTAT+AGG + Chr1:72660138-72660157 None:intergenic 35.0%
AGTTAAGCATATGGAAGGAA+TGG - Chr1:72657173-72657192 MsG0180004060.01.T01:intron 35.0%
ATGAAATGGAAATTGCAGTG+CGG - Chr1:72658398-72658417 MsG0180004060.01.T01:intron 35.0%
ATGTACAAACTAATCCACTG+TGG + Chr1:72658522-72658541 None:intergenic 35.0%
ATTTATGGCAAGCAATGTTC+GGG - Chr1:72661352-72661371 MsG0180004060.01.T01:intron 35.0%
CAACAACAAAACGCATTACT+GGG - Chr1:72658344-72658363 MsG0180004060.01.T01:intron 35.0%
CAACTGGATGAATTTAACCA+AGG - Chr1:72663273-72663292 MsG0180004060.01.T01:CDS 35.0%
CATGCAATAAACTTATAGGG+CGG + Chr1:72660134-72660153 None:intergenic 35.0%
CATGCACTTGACATAAATAG+AGG - Chr1:72659032-72659051 MsG0180004060.01.T01:intron 35.0%
CATTTCATCATATGAGCAAG+CGG + Chr1:72658176-72658195 None:intergenic 35.0%
GAATGTGCTCTCTAATTAAG+AGG + Chr1:72658875-72658894 None:intergenic 35.0%
GATTTATGGCAAGCAATGTT+CGG - Chr1:72661351-72661370 MsG0180004060.01.T01:intron 35.0%
GGCAAGAAATCATACAATGT+TGG - Chr1:72662846-72662865 MsG0180004060.01.T01:CDS 35.0%
GGCTTAACTTTGCAATAGTA+AGG - Chr1:72658945-72658964 MsG0180004060.01.T01:intron 35.0%
GGGCATGCAATAAACTTATA+GGG + Chr1:72660137-72660156 None:intergenic 35.0%
GTAGAAAACATGGTCCTAAA+AGG - Chr1:72656812-72656831 MsG0180004060.01.T01:three_prime_UTR 35.0%
GTAGTAAGATTGAAGGAGAA+GGG + Chr1:72659988-72660007 None:intergenic 35.0%
GTGTATGGTGATATTGTTAG+TGG - Chr1:72657120-72657139 MsG0180004060.01.T01:intron 35.0%
TAGCTCCAGATTTCATTTCA+TGG + Chr1:72659702-72659721 None:intergenic 35.0%
TCAGAATAATAGCCAGAATG+GGG - Chr1:72657287-72657306 MsG0180004060.01.T01:intron 35.0%
TGAAATTGGAGTTATCGTGA+TGG + Chr1:72661402-72661421 None:intergenic 35.0%
TGCAAGAATCTTAGACCTTA+TGG + Chr1:72658788-72658807 None:intergenic 35.0%
TGCGAAAATGTGAAAGAGTT+AGG + Chr1:72660858-72660877 None:intergenic 35.0%
TGCTGATAAGATAAAGACAG+AGG - Chr1:72658271-72658290 MsG0180004060.01.T01:intron 35.0%
TGTAGTAAGATTGAAGGAGA+AGG + Chr1:72659989-72660008 None:intergenic 35.0%
TGTCTTGATGTAACGTTAAG+AGG - Chr1:72663240-72663259 MsG0180004060.01.T01:CDS 35.0%
TGTGGCAGCACAAAATTATA+TGG - Chr1:72661246-72661265 MsG0180004060.01.T01:intron 35.0%
TGTTTCGCTCTTAAATTTGC+TGG - Chr1:72660354-72660373 MsG0180004060.01.T01:intron 35.0%
TTCAAAAGTTGTTTAGTGGG+GGG - Chr1:72661975-72661994 MsG0180004060.01.T01:intron 35.0%
TTGGTACAACTTGTCCAAAA+GGG + Chr1:72660603-72660622 None:intergenic 35.0%
TTGTGCAAGCAGTTTCAATT+TGG - Chr1:72658367-72658386 MsG0180004060.01.T01:intron 35.0%
TTTAGTCCAGCCTGAAAAAT+GGG + Chr1:72659096-72659115 None:intergenic 35.0%
TTTCAAAGCCCTTGTGAAAA+AGG + Chr1:72660059-72660078 None:intergenic 35.0%
TTTCATTTACTTCCTTCGCA+TGG - Chr1:72659888-72659907 MsG0180004060.01.T01:intron 35.0%
TTTGGTACAACTTGTCCAAA+AGG + Chr1:72660604-72660623 None:intergenic 35.0%
! AATATTTGGGGTTATCGATG+GGG - Chr1:72662070-72662089 MsG0180004060.01.T01:intron 35.0%
! CAAATATTTGGGGTTATCGA+TGG - Chr1:72662068-72662087 MsG0180004060.01.T01:intron 35.0%
! CAATTCCATTGCCTTTTTAC+TGG - Chr1:72661485-72661504 MsG0180004060.01.T01:intron 35.0%
! CTTTTTGAATATGTCGGTGA+AGG - Chr1:72662230-72662249 MsG0180004060.01.T01:intron 35.0%
! GAATTTGGTTTCTTCAGAAG+AGG - Chr1:72656981-72657000 MsG0180004060.01.T01:exon 35.0%
! GGACTAAACTCCTTATTTAG+AGG - Chr1:72659108-72659127 MsG0180004060.01.T01:intron 35.0%
! GTCTAGCTTGATTAATGTTG+AGG - Chr1:72657541-72657560 MsG0180004060.01.T01:intron 35.0%
! TGATAAGGTTGTTGAGTTGT+TGG - Chr1:72657398-72657417 MsG0180004060.01.T01:intron 35.0%
! TGCACAATGCAATTTGTTTC+TGG + Chr1:72660903-72660922 None:intergenic 35.0%
! TTGTTTTCTCGGGTGATTTA+TGG - Chr1:72661337-72661356 MsG0180004060.01.T01:intron 35.0%
! TTTTTCGTGTCATGTTTTCC+TGG + Chr1:72661788-72661807 None:intergenic 35.0%
!! CCGAAATGACCTAGTTTTTA+TGG + Chr1:72659135-72659154 None:intergenic 35.0%
!! GAAGCTTGGATTTTGAAGAT+GGG - Chr1:72656733-72656752 MsG0180004060.01.T01:three_prime_UTR 35.0%
!! GTCATCTTCATTTTGGCAAT+AGG + Chr1:72662419-72662438 None:intergenic 35.0%
!! TGAAAAGCGTAGTAGCATTT+TGG - Chr1:72658570-72658589 MsG0180004060.01.T01:intron 35.0%
!! TGAAGCTTGGATTTTGAAGA+TGG - Chr1:72656732-72656751 MsG0180004060.01.T01:three_prime_UTR 35.0%
!!! CGGATTTTAGAATCTGAACA+GGG + Chr1:72660157-72660176 None:intergenic 35.0%
!!! GGGGTTTTTAGTTAAGCATA+TGG - Chr1:72657164-72657183 MsG0180004060.01.T01:intron 35.0%
!!! TCGGATTTTAGAATCTGAAC+AGG + Chr1:72660158-72660177 None:intergenic 35.0%
!!! TGAAGATTTTGGTTTCCTTG+TGG - Chr1:72657695-72657714 MsG0180004060.01.T01:intron 35.0%
AAGTAGTTAAGACCATGCGA+AGG + Chr1:72659903-72659922 None:intergenic 40.0%
AATTGGAGTTATCGTGATGG+AGG + Chr1:72661399-72661418 None:intergenic 40.0%
ACCATTCTGTCATGTACTCA+TGG - Chr1:72659839-72659858 MsG0180004060.01.T01:intron 40.0%
ACCTACAGATTCTTGCATAC+AGG + Chr1:72657437-72657456 None:intergenic 40.0%
ACCTGTATGCAAGAATCTGT+AGG - Chr1:72657433-72657452 MsG0180004060.01.T01:intron 40.0%
AGCTTGATACGCAACTGTAT+TGG + Chr1:72657815-72657834 None:intergenic 40.0%
ATCAAGCTCTCAAGTCCTAT+TGG - Chr1:72657827-72657846 MsG0180004060.01.T01:intron 40.0%
ATCTACTTGAAAGCCGCTAT+TGG - Chr1:72662110-72662129 MsG0180004060.01.T01:intron 40.0%
ATGCCGAAATGTGTCAAATC+AGG + Chr1:72659332-72659351 None:intergenic 40.0%
CAACACAGCTAATCCACTAT+TGG + Chr1:72657901-72657920 None:intergenic 40.0%
CAGTGGTATCTGTTGATACA+TGG + Chr1:72659645-72659664 None:intergenic 40.0%
CATTCCATGAAAAGTCTTCC+AGG + Chr1:72657728-72657747 None:intergenic 40.0%
CCAAAGAGAAGATTTAGGTG+AGG - Chr1:72662362-72662381 MsG0180004060.01.T01:intron 40.0%
CCTCACCTAAATCTTCTCTT+TGG + Chr1:72662365-72662384 None:intergenic 40.0%
CGCTTGCTCATATGATGAAA+TGG - Chr1:72658174-72658193 MsG0180004060.01.T01:intron 40.0%
CTTGTCGTATGGAACAAAGT+TGG - Chr1:72660325-72660344 MsG0180004060.01.T01:intron 40.0%
GAAATCCTGTACTGCATCAT+GGG - Chr1:72659618-72659637 MsG0180004060.01.T01:intron 40.0%
GAACCGCTTAAGCAAATCAA+TGG + Chr1:72658829-72658848 None:intergenic 40.0%
GAAGATTTAGGTGAGGCAAT+AGG - Chr1:72662369-72662388 MsG0180004060.01.T01:intron 40.0%
GAATGAGATCTTGAACTCAG+AGG - Chr1:72656951-72656970 MsG0180004060.01.T01:three_prime_UTR 40.0%
GAATGGTGAGGAAAATGGAT+AGG - Chr1:72657190-72657209 MsG0180004060.01.T01:intron 40.0%
GACGTTCATGCAGAATTCAA+CGG - Chr1:72663189-72663208 MsG0180004060.01.T01:CDS 40.0%
GATGCAGTACAGGATTTCAA+CGG + Chr1:72659616-72659635 None:intergenic 40.0%
GCAATAGTAAGGACTTCAGA+AGG - Chr1:72658956-72658975 MsG0180004060.01.T01:intron 40.0%
GGACTTATACTTGTAGTTGG+TGG + Chr1:72661453-72661472 None:intergenic 40.0%
GGTGGAATGTACATTGTACT+TGG - Chr1:72661373-72661392 MsG0180004060.01.T01:intron 40.0%
GGTTCAACATGCTATTCAGA+GGG - Chr1:72658844-72658863 MsG0180004060.01.T01:intron 40.0%
GTCAACTTATTTGCCTGACA+CGG + Chr1:72659766-72659785 None:intergenic 40.0%
GTTCAACATGCTATTCAGAG+GGG - Chr1:72658845-72658864 MsG0180004060.01.T01:intron 40.0%
GTTTAGTCCAGCCTGAAAAA+TGG + Chr1:72659097-72659116 None:intergenic 40.0%
GTTTGCCTCAATGTGAGAAA+CGG + Chr1:72659164-72659183 None:intergenic 40.0%
TACAGGATTTCAACGGTATG+TGG + Chr1:72659609-72659628 None:intergenic 40.0%
TCAAGCTCTCAAGTCCTATT+GGG - Chr1:72657828-72657847 MsG0180004060.01.T01:intron 40.0%
TCCATGAGTACATGACAGAA+TGG + Chr1:72659843-72659862 None:intergenic 40.0%
TCGTGCAAAATGAATGTGGT+CGG - Chr1:72657517-72657536 MsG0180004060.01.T01:intron 40.0%
TGAAATCCTGTACTGCATCA+TGG - Chr1:72659617-72659636 MsG0180004060.01.T01:intron 40.0%
TGATGAAATGGCAAAGTGAG+AGG - Chr1:72658186-72658205 MsG0180004060.01.T01:intron 40.0%
TGCAAGAATCTGTAGGTCTT+TGG - Chr1:72657440-72657459 MsG0180004060.01.T01:intron 40.0%
TGGTACAACTTGTCCAAAAG+GGG + Chr1:72660602-72660621 None:intergenic 40.0%
TGTAACGTTAAGAGGTCTCA+AGG - Chr1:72663248-72663267 MsG0180004060.01.T01:CDS 40.0%
TTGAGTTCAATTGGGGGAAA+TGG - Chr1:72657615-72657634 MsG0180004060.01.T01:intron 40.0%
TTTGCCTCAATGTGAGAAAC+GGG + Chr1:72659163-72659182 None:intergenic 40.0%
! AAAACGTGACGAGCATGTTT+TGG - Chr1:72663400-72663419 MsG0180004060.01.T01:CDS 40.0%
! AAACGTGACGAGCATGTTTT+GGG - Chr1:72663401-72663420 MsG0180004060.01.T01:CDS 40.0%
! AAGTCCTGGAAGACTTTTCA+TGG - Chr1:72657721-72657740 MsG0180004060.01.T01:intron 40.0%
! AGATGTTGCCAACTAGCTTA+AGG - Chr1:72658042-72658061 MsG0180004060.01.T01:intron 40.0%
! ATACTTTGAGTTACCGTGTC+AGG - Chr1:72659750-72659769 MsG0180004060.01.T01:intron 40.0%
! ATAGGTATGTGAGTGCTACT+AGG - Chr1:72657208-72657227 MsG0180004060.01.T01:intron 40.0%
! ATATTTGGGGTTATCGATGG+GGG - Chr1:72662071-72662090 MsG0180004060.01.T01:intron 40.0%
! CGTCCTGATTTGACACATTT+CGG - Chr1:72659326-72659345 MsG0180004060.01.T01:intron 40.0%
! CTTTTGTACTTTGGCCTGAT+GGG - Chr1:72659293-72659312 MsG0180004060.01.T01:intron 40.0%
! GTCTTTGGTGATTTACAGTG+AGG - Chr1:72657455-72657474 MsG0180004060.01.T01:intron 40.0%
! TCAGGCAAATAAGTTGACAG+TGG - Chr1:72659768-72659787 MsG0180004060.01.T01:intron 40.0%
! TGTAGATTTGAAGCAATGGC+CGG - Chr1:72663159-72663178 MsG0180004060.01.T01:CDS 40.0%
! TTGGTGATTTACAGTGAGGA+AGG - Chr1:72657459-72657478 MsG0180004060.01.T01:intron 40.0%
! TTTGAGCTTCATACCCCTTT+TGG - Chr1:72660586-72660605 MsG0180004060.01.T01:intron 40.0%
! TTTTGTGCTGCCACAATACA+AGG + Chr1:72661241-72661260 None:intergenic 40.0%
!! AACCACTCTCCTTTTTCACA+AGG - Chr1:72660047-72660066 MsG0180004060.01.T01:intron 40.0%
!! ACCACTCTCCTTTTTCACAA+GGG - Chr1:72660048-72660067 MsG0180004060.01.T01:intron 40.0%
!! ATGTACATGGCTTTGTTGAG+AGG - Chr1:72661919-72661938 MsG0180004060.01.T01:intron 40.0%
!! GTATCATTTTGACACCACAG+TGG - Chr1:72658505-72658524 MsG0180004060.01.T01:intron 40.0%
!! GTTGGTGGTGAAGTCAAAAA+AGG + Chr1:72661438-72661457 None:intergenic 40.0%
!! TGTGCAAGAGGCATCATATA+TGG + Chr1:72658111-72658130 None:intergenic 40.0%
!!! ATTTTAGAGTTTGGGAAGGG+AGG + Chr1:72660780-72660799 None:intergenic 40.0%
!!! GTCTTTTATGCTAGCCTTCA+AGG - Chr1:72660498-72660517 MsG0180004060.01.T01:intron 40.0%
!!! TCTGGTTTTTGTCCTGCAAA+GGG + Chr1:72660885-72660904 None:intergenic 40.0%
!!! TGGCTTTGTTGAGAGGTTTT+CGG - Chr1:72661926-72661945 MsG0180004060.01.T01:intron 40.0%
!!! TTCTGGTTTTTGTCCTGCAA+AGG + Chr1:72660886-72660905 None:intergenic 40.0%
AACCTCAGAGGTTGAAGGTT+CGG - Chr1:72663217-72663236 MsG0180004060.01.T01:CDS 45.0%
AAGAGGTCTCAAGGATCAAC+TGG - Chr1:72663257-72663276 MsG0180004060.01.T01:CDS 45.0%
AAGATTGAAGGAGAAGGGTG+AGG + Chr1:72659983-72660002 None:intergenic 45.0%
AATGGGGGGTTTGAATGAGT+TGG - Chr1:72657245-72657264 MsG0180004060.01.T01:intron 45.0%
ACATCCAAATGCAGCATGAG+AGG + Chr1:72659487-72659506 None:intergenic 45.0%
ACGCAGTCATAGCAGAAAAC+TGG - Chr1:72657585-72657604 MsG0180004060.01.T01:intron 45.0%
AGAATGGGGAGAGTAGAAGA+GGG - Chr1:72657301-72657320 MsG0180004060.01.T01:intron 45.0%
AGCATATGGAAGGAATGGTG+AGG - Chr1:72657178-72657197 MsG0180004060.01.T01:intron 45.0%
AGCATTACTATAGCTCGCGA+GGG + Chr1:72661306-72661325 None:intergenic 45.0%
AGCTTTCCACATTAATGGCG+AGG - Chr1:72657998-72658017 MsG0180004060.01.T01:intron 45.0%
ATGTGTCAAATCAGGACGTC+TGG + Chr1:72659324-72659343 None:intergenic 45.0%
CAAGGGTTTGAGCATGTGTA+TGG - Chr1:72657105-72657124 MsG0180004060.01.T01:intron 45.0%
CCACTCGTGCAAAATGAATG+TGG - Chr1:72657513-72657532 MsG0180004060.01.T01:intron 45.0%
CCTCACAATTACCAATCCCA+AGG + Chr1:72657488-72657507 None:intergenic 45.0%
CGGTTCAACATGCTATTCAG+AGG - Chr1:72658843-72658862 MsG0180004060.01.T01:intron 45.0%
CTAAGATTCTTGCACACTGC+CGG - Chr1:72658794-72658813 MsG0180004060.01.T01:intron 45.0%
CTCTCAAGTCCTATTGGGAT+TGG - Chr1:72657833-72657852 MsG0180004060.01.T01:intron 45.0%
GCAACGTTAGTTAACTCACG+TGG - Chr1:72662585-72662604 MsG0180004060.01.T01:intron 45.0%
GCTCAACTTTGGTCCAATAG+TGG - Chr1:72657885-72657904 MsG0180004060.01.T01:intron 45.0%
GGAAGGAATGGTGAGGAAAA+TGG - Chr1:72657185-72657204 MsG0180004060.01.T01:intron 45.0%
GGGGAAATGGTAGTAGTAGT+AGG - Chr1:72657628-72657647 MsG0180004060.01.T01:intron 45.0%
GGTGAGGCAATAGGTGTAAT+AGG - Chr1:72662378-72662397 MsG0180004060.01.T01:intron 45.0%
GTTCATGCAGAATTCAACGG+CGG - Chr1:72663192-72663211 MsG0180004060.01.T01:CDS 45.0%
TAAACGTGTCGCGATTTCAC+CGG - Chr1:72661272-72661291 MsG0180004060.01.T01:intron 45.0%
TAACTCACAGTCACAGACAG+TGG + Chr1:72659662-72659681 None:intergenic 45.0%
TAGAAACCACACCAGCAACA+CGG + Chr1:72657053-72657072 None:intergenic 45.0%
TAGCTTCCTCGCCATTAATG+TGG + Chr1:72658007-72658026 None:intergenic 45.0%
TATGGCAGAAGCAAGATGTG+AGG - Chr1:72657340-72657359 MsG0180004060.01.T01:intron 45.0%
TCAGGCCAAAGTACAAAAGC+AGG + Chr1:72659292-72659311 None:intergenic 45.0%
TCCATACGACAAGATGTGTG+TGG + Chr1:72660318-72660337 None:intergenic 45.0%
TGAACCTCTCATGCTGCATT+TGG - Chr1:72659480-72659499 MsG0180004060.01.T01:intron 45.0%
TGGGGGGGATAAGTTATGTT+GGG - Chr1:72662301-72662320 MsG0180004060.01.T01:intron 45.0%
TTGGGGGGGATAAGTTATGT+TGG - Chr1:72662300-72662319 MsG0180004060.01.T01:intron 45.0%
TTTCCTTGTGGAACAAGTCC+TGG - Chr1:72657707-72657726 MsG0180004060.01.T01:intron 45.0%
! AGAGGTTTTCGGATAATGCC+GGG - Chr1:72661937-72661956 MsG0180004060.01.T01:intron 45.0%
! AGGTTGTTGAGTTGTTGGCT+AGG - Chr1:72657403-72657422 MsG0180004060.01.T01:intron 45.0%
! CCACATTCATTTTGCACGAG+TGG + Chr1:72657516-72657535 None:intergenic 45.0%
! CCTTGGGATTGGTAATTGTG+AGG - Chr1:72657485-72657504 MsG0180004060.01.T01:intron 45.0%
! CTGGTGTGGTTTCTAGGTTA+GGG - Chr1:72657058-72657077 MsG0180004060.01.T01:intron 45.0%
! GAGAGGAATTTTGAGCAACG+CGG - Chr1:72658203-72658222 MsG0180004060.01.T01:intron 45.0%
! GAGAGGTTTTCGGATAATGC+CGG - Chr1:72661936-72661955 MsG0180004060.01.T01:intron 45.0%
! GCTTTTGTACTTTGGCCTGA+TGG - Chr1:72659292-72659311 MsG0180004060.01.T01:intron 45.0%
! GGAGCACTTATGCTCAACTT+TGG - Chr1:72657874-72657893 MsG0180004060.01.T01:intron 45.0%
! GTAGATTTGAAGCAATGGCC+GGG - Chr1:72663160-72663179 MsG0180004060.01.T01:CDS 45.0%
!! CCAATTTTAGTCAGACCAGC+GGG - Chr1:72659057-72659076 MsG0180004060.01.T01:intron 45.0%
!! CTCAGAGGGTGTTAGGAATT+TGG - Chr1:72656966-72656985 MsG0180004060.01.T01:three_prime_UTR 45.0%
!! GCCAATTTTAGTCAGACCAG+CGG - Chr1:72659056-72659075 MsG0180004060.01.T01:intron 45.0%
!! GGCTCGGTTTGATGTGTTTT+AGG - Chr1:72659220-72659239 MsG0180004060.01.T01:intron 45.0%
!! TCTGGCCTGCTTTTGTACTT+TGG - Chr1:72659284-72659303 MsG0180004060.01.T01:intron 45.0%
!! TCTTGAACTCAGAGGGTGTT+AGG - Chr1:72656959-72656978 MsG0180004060.01.T01:three_prime_UTR 45.0%
!!! AACTTGCGCAAGGGCATTTT+TGG + Chr1:72662508-72662527 None:intergenic 45.0%
!! AAACTTATAATAATAAAAAA+TGG + Chr1:72661603-72661622 None:intergenic 5.0%
!! AACTTATAATAATAAAAAAT+GGG + Chr1:72661602-72661621 None:intergenic 5.0%
AAACGTCCAACGCTCGATGA+GGG - Chr1:72663339-72663358 MsG0180004060.01.T01:CDS 50.0%
AAACGTGTCGCGATTTCACC+GGG - Chr1:72661273-72661292 MsG0180004060.01.T01:intron 50.0%
AATGCAGATTTCACGGGGCT+CGG - Chr1:72659204-72659223 MsG0180004060.01.T01:intron 50.0%
ACAGCCCGTTTCTCACATTG+AGG - Chr1:72659156-72659175 MsG0180004060.01.T01:intron 50.0%
ACAGTGAGGAAGGATGCCTT+GGG - Chr1:72657469-72657488 MsG0180004060.01.T01:intron 50.0%
ACTCTTGACGGGATACTTCG+GGG - Chr1:72658144-72658163 MsG0180004060.01.T01:intron 50.0%
AGAGCGTGAGCAAAATGTGC+TGG + Chr1:72662476-72662495 None:intergenic 50.0%
AGCAACGCGGAATAGTTAGC+AGG - Chr1:72658216-72658235 MsG0180004060.01.T01:intron 50.0%
AGCCGCTATTGGAGCAATTG+AGG - Chr1:72662121-72662140 MsG0180004060.01.T01:intron 50.0%
AGCCTGAAAAATGGGCCCAT+CGG + Chr1:72659088-72659107 None:intergenic 50.0%
AGGAAATGCTCACCACACTG+AGG + Chr1:72658464-72658483 None:intergenic 50.0%
ATGGTCCCATGATGCAGTAC+AGG + Chr1:72659626-72659645 None:intergenic 50.0%
CAGAATGGGGAGAGTAGAAG+AGG - Chr1:72657300-72657319 MsG0180004060.01.T01:intron 50.0%
CAGCATTACTATAGCTCGCG+AGG + Chr1:72661307-72661326 None:intergenic 50.0%
CATCCTCCAAGAGTAGAAGG+AGG + Chr1:72657926-72657945 None:intergenic 50.0%
CGACTCTTGACGGGATACTT+CGG - Chr1:72658142-72658161 MsG0180004060.01.T01:intron 50.0%
CGCCTCAATTGCTCCAATAG+CGG + Chr1:72662126-72662145 None:intergenic 50.0%
CTCTTCTACTCTCCCCATTC+TGG + Chr1:72657302-72657321 None:intergenic 50.0%
GACTCTTGACGGGATACTTC+GGG - Chr1:72658143-72658162 MsG0180004060.01.T01:intron 50.0%
GAGCGTGAGCAAAATGTGCT+GGG + Chr1:72662475-72662494 None:intergenic 50.0%
GAGGAATTGAACCGTGTTGC+TGG - Chr1:72657039-72657058 MsG0180004060.01.T01:intron 50.0%
GCAAGATGTGAGGCAGCTTA+AGG - Chr1:72657350-72657369 MsG0180004060.01.T01:intron 50.0%
GCACATCCTCCAAGAGTAGA+AGG + Chr1:72657929-72657948 None:intergenic 50.0%
GCCACACACATCTTGTCGTA+TGG - Chr1:72660314-72660333 MsG0180004060.01.T01:intron 50.0%
GCCCTTGTGAAAAAGGAGAG+TGG + Chr1:72660052-72660071 None:intergenic 50.0%
GGTTTGAGCAGAGGCTTGTA+TGG - Chr1:72657322-72657341 MsG0180004060.01.T01:intron 50.0%
GTAGAAGAGGGTTTGAGCAG+AGG - Chr1:72657313-72657332 MsG0180004060.01.T01:intron 50.0%
GTGCTGCCACAATACAAGGA+AGG + Chr1:72661237-72661256 None:intergenic 50.0%
GTTCTGTGCCTGCTTTGCAA+GGG - Chr1:72657088-72657107 MsG0180004060.01.T01:intron 50.0%
GTTGCTCCTCCTTCTACTCT+TGG - Chr1:72657917-72657936 MsG0180004060.01.T01:intron 50.0%
TAAACGTCCAACGCTCGATG+AGG - Chr1:72663338-72663357 MsG0180004060.01.T01:CDS 50.0%
TACAGTGAGGAAGGATGCCT+TGG - Chr1:72657468-72657487 MsG0180004060.01.T01:intron 50.0%
TATCGATGGGGGCAAATCCA+AGG - Chr1:72662082-72662101 MsG0180004060.01.T01:intron 50.0%
TATGGCAAGCAATGTTCGGG+TGG - Chr1:72661355-72661374 MsG0180004060.01.T01:intron 50.0%
TCAAGGCTCAAGCAACACCT+TGG - Chr1:72660515-72660534 MsG0180004060.01.T01:intron 50.0%
TGATGCCTCTTGCACATGAC+TGG - Chr1:72658115-72658134 MsG0180004060.01.T01:intron 50.0%
TGATGTTGCTATCGACCGTG+AGG - Chr1:72657788-72657807 MsG0180004060.01.T01:intron 50.0%
TGCTCAAACCCTTGCAAAGC+AGG + Chr1:72657099-72657118 None:intergenic 50.0%
TGTTCTGTGCCTGCTTTGCA+AGG - Chr1:72657087-72657106 MsG0180004060.01.T01:intron 50.0%
! AGAAGGGTGAGGTGCTAACA+GGG + Chr1:72659972-72659991 None:intergenic 50.0%
! ATTGAACCGTGTTGCTGGTG+TGG - Chr1:72657044-72657063 MsG0180004060.01.T01:intron 50.0%
! CCCGCTGGTCTGACTAAAAT+TGG + Chr1:72659060-72659079 None:intergenic 50.0%
! CGCAACTGTATTGGTCCTCA+CGG + Chr1:72657806-72657825 None:intergenic 50.0%
! CTTCCAGGACTTGTTCCACA+AGG + Chr1:72657713-72657732 None:intergenic 50.0%
! GCTGGTGTGGTTTCTAGGTT+AGG - Chr1:72657057-72657076 MsG0180004060.01.T01:intron 50.0%
! GTGTTGCTGGTGTGGTTTCT+AGG - Chr1:72657052-72657071 MsG0180004060.01.T01:intron 50.0%
! TTTTCGCAAGCACCCTTTGC+AGG - Chr1:72660870-72660889 MsG0180004060.01.T01:intron 50.0%
!! AGGTGTTGCTTGAGCCTTGA+AGG + Chr1:72660515-72660534 None:intergenic 50.0%
!! GCGCAAGTTAACTTGCGCAA+GGG + Chr1:72662538-72662519 None:intergenic 50.0%
!! TGCGCAAGTTAACTTGCGCA+AGG + Chr1:72662537-72662518 None:intergenic 50.0%
!!! TGCGCAAGGGCATTTTTGGT+AGG + Chr1:72662504-72662523 None:intergenic 50.0%
AACGTCCAACGCTCGATGAG+GGG - Chr1:72663340-72663359 MsG0180004060.01.T01:CDS 55.0%
ACTGGAAGGCGACTCTTGAC+GGG - Chr1:72658133-72658152 MsG0180004060.01.T01:intron 55.0%
CAACCCCAGAGACACAAGGA+GGG - Chr1:72663299-72663318 MsG0180004060.01.T01:CDS 55.0%
CAAGGAGGGTGGAATACGTC+TGG - Chr1:72663313-72663332 MsG0180004060.01.T01:CDS 55.0%
CACCGAACCTTCAACCTCTG+AGG + Chr1:72663222-72663241 None:intergenic 55.0%
CGGAGAACCTCAGAGGTTGA+AGG - Chr1:72663212-72663231 MsG0180004060.01.T01:CDS 55.0%
CGTGAGCAAAATGTGCTGGG+TGG + Chr1:72662472-72662491 None:intergenic 55.0%
GAAAAATGGGCCCATCGGGA+AGG + Chr1:72659083-72659102 None:intergenic 55.0%
GACTGGAAGGCGACTCTTGA+CGG - Chr1:72658132-72658151 MsG0180004060.01.T01:intron 55.0%
GAGGAAGGATGCCTTGGGAT+TGG - Chr1:72657474-72657493 MsG0180004060.01.T01:intron 55.0%
GAGTCAACCCCAGAGACACA+AGG - Chr1:72663295-72663314 MsG0180004060.01.T01:CDS 55.0%
GCCTCTTGCACATGACTGGA+AGG - Chr1:72658119-72658138 MsG0180004060.01.T01:intron 55.0%
GCCTGAAAAATGGGCCCATC+GGG + Chr1:72659087-72659106 None:intergenic 55.0%
GCCTTCCAGTCATGTGCAAG+AGG + Chr1:72658123-72658142 None:intergenic 55.0%
GCTCCTCCTTCTACTCTTGG+AGG - Chr1:72657920-72657939 MsG0180004060.01.T01:intron 55.0%
TCAACCCCAGAGACACAAGG+AGG - Chr1:72663298-72663317 MsG0180004060.01.T01:CDS 55.0%
TCCACCCTCCTTGTGTCTCT+GGG + Chr1:72663306-72663325 None:intergenic 55.0%
TGCATGAACGTCGATCCACC+CGG + Chr1:72663181-72663200 None:intergenic 55.0%
TGTTCGACGTGAGAAGCTCG+AGG - Chr1:72657020-72657039 MsG0180004060.01.T01:intron 55.0%
TTCCACCCTCCTTGTGTCTC+TGG + Chr1:72663307-72663326 None:intergenic 55.0%
! GAGAAGGGTGAGGTGCTAAC+AGG + Chr1:72659973-72659992 None:intergenic 55.0%
! GATTTGAAGCAATGGCCGGG+TGG - Chr1:72663163-72663182 MsG0180004060.01.T01:CDS 55.0%
!! AGGGGAGGGTATCACTCACT+TGG - Chr1:72663358-72663377 MsG0180004060.01.T01:CDS 55.0%
!! GAGGGTATCACTCACTTGGG+TGG - Chr1:72663362-72663381 MsG0180004060.01.T01:CDS 55.0%
!! GGGGAGGGTATCACTCACTT+GGG - Chr1:72663359-72663378 MsG0180004060.01.T01:CDS 55.0%
!! GTACTTTGGCCTGATGGGCT+AGG - Chr1:72659298-72659317 MsG0180004060.01.T01:intron 55.0%
!! TCCCGATGGGCCCATTTTTC+AGG - Chr1:72659083-72659102 MsG0180004060.01.T01:intron 55.0%
!! TGTCTCTGGGGTTGACTCCT+TGG + Chr1:72663293-72663312 None:intergenic 55.0%
!!! GATGGGCCCATTTTTCAGGC+TGG - Chr1:72659087-72659106 MsG0180004060.01.T01:intron 55.0%
CCACCCTCCTTGTGTCTCTG+GGG + Chr1:72663305-72663324 None:intergenic 60.0%
TCAACGGCGGAGAACCTCAG+AGG - Chr1:72663205-72663224 MsG0180004060.01.T01:CDS 60.0%
TCCAACGCTCGATGAGGGGA+GGG - Chr1:72663344-72663363 MsG0180004060.01.T01:CDS 60.0%
! GCTCGCGAGGGATTTTGTCC+CGG + Chr1:72661294-72661313 None:intergenic 60.0%
ACCCTCCCCTCATCGAGCGT+TGG + Chr1:72663348-72663367 None:intergenic 65.0%
CCCCAGAGACACAAGGAGGG+TGG - Chr1:72663302-72663321 MsG0180004060.01.T01:CDS 65.0%
GACGTCTGGCCTAGCCCATC+AGG + Chr1:72659310-72659329 None:intergenic 65.0%
GTCCAACGCTCGATGAGGGG+AGG - Chr1:72663343-72663362 MsG0180004060.01.T01:CDS 65.0%
AGACCAGCGGGCCTTCCCGA+TGG - Chr1:72659069-72659088 MsG0180004060.01.T01:intron 70.0%
GACCAGCGGGCCTTCCCGAT+GGG - Chr1:72659070-72659089 MsG0180004060.01.T01:intron 70.0%
! GGCCCATCGGGAAGGCCCGC+TGG + Chr1:72659075-72659094 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 72656724 72663440 72656724 ID=MsG0180004060.01;Name=MsG0180004060.01
Chr1 mRNA 72656724 72663440 72656724 ID=MsG0180004060.01.T01;Parent=MsG0180004060.01;Name=MsG0180004060.01.T01;_AED=0.58;_eAED=0.58;_QI=0|0|0|0.66|1|1|3|276|313
Chr1 exon 72662658 72663440 72662658 ID=MsG0180004060.01.T01:exon:5118;Parent=MsG0180004060.01.T01
Chr1 exon 72662407 72662564 72662407 ID=MsG0180004060.01.T01:exon:5117;Parent=MsG0180004060.01.T01
Chr1 exon 72656724 72657000 72656724 ID=MsG0180004060.01.T01:exon:5116;Parent=MsG0180004060.01.T01
Chr1 CDS 72662658 72663440 72662658 ID=MsG0180004060.01.T01:cds;Parent=MsG0180004060.01.T01
Chr1 CDS 72662407 72662564 72662407 ID=MsG0180004060.01.T01:cds;Parent=MsG0180004060.01.T01
Chr1 CDS 72657000 72657000 72657000 ID=MsG0180004060.01.T01:cds;Parent=MsG0180004060.01.T01
Chr1 three_prime_UTR 72656724 72656999 72656724 ID=MsG0180004060.01.T01:three_prime_utr;Parent=MsG0180004060.01.T01
Gene Sequence

>MsG0180004060.01.T01

ATGGTTGCTGAAGCTTGGATTTTGAAGATGGGTAACCAAGTAAGTGCAAATATTAAACAAGCCCTTTTGCTTGAAACTTCTTCTACTAGTAGAAAACATGGTCCTAAAAGGAAAGAGAATAAGAAAGTAGAAACTATAGGTATTCTTTCTTTTGAAGTAGCTAATGTAATGTCCAAAACCATTCAACTTTATAAATCATTGTCTGAATCTGAGATAGCAAAGTTAAGGAATGAGATCTTGAACTCAGAGGGTGTTAGGAATTTGGTTTCTTCAGAAGAGGGTTATTTATTCGAGCTTGTTCGACGTGAGAAGCTCGAGGAATTGAACCGTGTTGCTGGTGTGGTTTCTAGGTTAGGGAAGAAGTGTTCTGTGCCTGCTTTGCAAGGGTTTGAGCATGTGTATGGTGATATTGTTAGTGGTGTTATAGATGTGAATGAATTGGGGTTTTTAGTTAAGCATATGGAAGGAATGGTGAGGAAAATGGATAGGTATGTGAGTGCTACTAGGAGTTTGTATAGTAAAATGGGGGGTTTGAATGAGTTGGAGCAAACAGTGAAGAAGTTTCAGAATAATAGCCAGAATGGGGAGAGTAGAAGAGGGTTTGAGCAGAGGCTTGTATGGCAGAAGCAAGATGTGAGGCAGCTTAAGGAGATTTCACTTTGGAATCAGACTTTTGATAAGGTTGTTGAGTTGTTGGCTAGGCAGTTGTACCTGTATGCAAGAATCTGTAGGTCTTTGGTGATTTACAGTGAGGAAGGATGCCTTGGGATTGGTAATTGTGAGAAAACTGGTTACAATTTGAGTTCAATTGGGGGAAATGGTAGTAGTAGTAGGTCTCATATAGATATGAAGAGAGGTGAGTTAGCATATGTTCAACTTGAAGATTTTGGTTTCCTTGTGGAACAAGTCCTGGAAGACTTTTCATGGAATGTCTCAGTTTAA

Protein sequence

>MsG0180004060.01.T01

MVAEAWILKMGNQVSANIKQALLLETSSTSRKHGPKRKENKKVETIGILSFEVANVMSKTIQLYKSLSESEIAKLRNEILNSEGVRNLVSSEEGYLFELVRREKLEELNRVAGVVSRLGKKCSVPALQGFEHVYGDIVSGVIDVNELGFLVKHMEGMVRKMDRYVSATRSLYSKMGGLNELEQTVKKFQNNSQNGESRRGFEQRLVWQKQDVRQLKEISLWNQTFDKVVELLARQLYLYARICRSLVIYSEEGCLGIGNCEKTGYNLSSIGGNGSSSRSHIDMKRGELAYVQLEDFGFLVEQVLEDFSWNVSV*