AlfalfaGEDB | MsG0480021350.01

M. sativa cultivar ZhongmuNo.1 / MsG0480021350.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021350.01.T01	XP_024633433.1	49.537	216	107	1	14	229	28	241	2.69E-67	218

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021350.01.T01	A0A396HMX6	47.907	215	110	1	15	229	29	241	2.01e-61	202

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048396.01	MsG0480021350.01	0.833027	6.751592e-56	7.680714e-53
MsG0080048461.01	MsG0480021350.01	0.805969	1.032790e-49	5.539146e-47
MsG0080048874.01	MsG0480021350.01	0.800870	1.176564e-48	5.538936e-46
MsG0180000065.01	MsG0480021350.01	0.811016	8.645145e-51	5.292641e-48
MsG0180000195.01	MsG0480021350.01	0.812261	4.633562e-51	2.932242e-48
MsG0180000353.01	MsG0480021350.01	0.825528	4.462671e-54	4.078014e-51
MsG0180000470.01	MsG0480021350.01	0.808784	2.611896e-50	1.506938e-47
MsG0180001127.01	MsG0480021350.01	0.816511	5.327104e-52	3.782049e-49
MsG0180001565.01	MsG0480021350.01	0.806003	1.015524e-49	5.451563e-47
MsG0180002195.01	MsG0480021350.01	0.809975	1.450412e-50	8.637626e-48
MsG0180002282.01	MsG0480021350.01	0.806760	7.033400e-50	3.849057e-47
MsG0180002870.01	MsG0480021350.01	0.821878	3.194642e-53	2.631643e-50
MsG0180003361.01	MsG0480021350.01	0.847984	8.178973e-60	1.479123e-56
MsG0180003669.01	MsG0480021350.01	0.840560	8.077260e-58	1.154914e-54
MsG0180004157.01	MsG0480021350.01	0.804542	2.054507e-49	1.062136e-46
MsG0180004264.01	MsG0480021350.01	0.811754	5.977168e-51	3.730887e-48
MsG0180004357.01	MsG0480021350.01	0.812381	4.362365e-51	2.769472e-48
MsG0180005050.01	MsG0480021350.01	0.808826	2.558504e-50	1.477786e-47
MsG0180005664.01	MsG0480021350.01	0.800800	1.215741e-48	5.712965e-46
MsG0180005860.01	MsG0480021350.01	0.816430	5.552255e-52	3.933173e-49
MsG0180005987.01	MsG0480021350.01	0.832469	9.286814e-56	1.038938e-52
MsG0180006023.01	MsG0480021350.01	0.830262	3.242244e-55	3.398722e-52
MsG0280010551.01	MsG0480021350.01	0.826224	3.050450e-54	2.843369e-51
MsG0280010614.01	MsG0480021350.01	0.804927	1.707563e-49	8.916744e-47
MsG0280010698.01	MsG0480021350.01	0.827985	1.155950e-54	1.133975e-51
MsG0280011014.01	MsG0480021350.01	0.803430	3.498984e-49	1.757953e-46
MsG0280011124.01	MsG0480021350.01	0.811127	8.177803e-51	5.020749e-48
MsG0280011258.01	MsG0480021350.01	0.824529	7.682705e-54	6.823164e-51
MsG0280011282.01	MsG0480021350.01	0.839097	1.942914e-57	2.655159e-54
MsG0280011285.01	MsG0480021350.01	0.818966	1.487583e-52	1.129990e-49
MsG0380012146.01	MsG0480021350.01	0.813978	1.946846e-51	1.290059e-48
MsG0380012471.01	MsG0480021350.01	0.830748	2.466208e-55	2.622123e-52
MsG0380013834.01	MsG0480021350.01	0.809593	1.752981e-50	1.033510e-47
MsG0380014118.01	MsG0480021350.01	0.810737	9.932861e-51	6.035538e-48
MsG0380014573.01	MsG0480021350.01	0.819411	1.177890e-52	9.057277e-50
MsG0480018586.01	MsG0480021350.01	0.804592	2.005831e-49	1.038331e-46
MsG0480020559.01	MsG0480021350.01	0.809572	1.771262e-50	1.043711e-47
MsG0480020634.01	MsG0480021350.01	0.803263	3.789351e-49	1.895682e-46
MsG0480021350.01	MsG0480021778.01	0.818807	1.616140e-52	1.222105e-49
MsG0480021350.01	MsG0480022480.01	0.814635	1.393758e-51	9.401928e-49
MsG0480021350.01	MsG0480023196.01	0.808722	2.694059e-50	1.551742e-47
MsG0480021350.01	MsG0480023707.01	0.813448	2.546878e-51	1.663750e-48
MsG0480021350.01	MsG0480023718.01	0.833922	4.036088e-56	4.716712e-53
MsG0480021350.01	MsG0580024035.01	0.837690	4.479741e-57	5.865130e-54
MsG0480021350.01	MsG0580024129.01	0.800008	1.763210e-48	8.120684e-46
MsG0480021350.01	MsG0580024241.01	0.806555	7.771325e-50	4.230793e-47
MsG0480021350.01	MsG0580027208.01	0.826866	2.144282e-54	2.035676e-51
MsG0480021350.01	MsG0580027687.01	0.817007	4.121810e-52	2.966646e-49
MsG0480021350.01	MsG0580027688.01	0.805916	1.059233e-49	5.673326e-47
MsG0480021350.01	MsG0580027745.01	0.829533	4.882235e-55	5.010511e-52
MsG0480021350.01	MsG0580027832.01	0.822817	1.933708e-53	1.636075e-50
MsG0480021350.01	MsG0580027833.01	0.803185	3.932304e-49	1.963297e-46
MsG0480021350.01	MsG0580028176.01	0.807842	4.147843e-50	2.334688e-47
MsG0480021350.01	MsG0580028990.01	0.841675	4.116255e-58	6.092639e-55
MsG0480021350.01	MsG0580029189.01	0.803377	3.588582e-49	1.800466e-46
MsG0480021350.01	MsG0580029541.01	0.804217	2.401760e-49	1.231294e-46
MsG0480021350.01	MsG0580029554.01	0.827264	1.722509e-54	1.654584e-51
MsG0480021350.01	MsG0580029640.01	0.807509	4.883185e-50	2.724963e-47
MsG0480021350.01	MsG0580030173.01	0.805549	1.265480e-49	6.713944e-47
MsG0480021350.01	MsG0680030529.01	0.815533	8.805748e-52	6.087070e-49
MsG0480021350.01	MsG0680030633.01	0.802005	6.886368e-49	3.336253e-46
MsG0480021350.01	MsG0680030656.01	0.814660	1.375733e-51	9.286335e-49
MsG0480021350.01	MsG0680030672.01	0.834828	2.391703e-56	2.871665e-53
MsG0480021350.01	MsG0680031114.01	0.832562	8.807762e-56	9.881279e-53
MsG0480021350.01	MsG0680034722.01	0.807645	4.567848e-50	2.557885e-47
MsG0480021350.01	MsG0680035346.01	0.800997	1.108368e-48	5.234968e-46
MsG0480021350.01	MsG0680035573.01	0.811084	8.357009e-51	5.125019e-48
MsG0480021350.01	MsG0680035692.01	0.832661	8.324952e-56	9.367270e-53
MsG0480021350.01	MsG0780036477.01	0.815928	7.189299e-52	5.023515e-49
MsG0480021350.01	MsG0780036498.01	0.862814	3.880371e-64	1.151701e-60
MsG0480021350.01	MsG0780036663.01	0.803589	3.243096e-49	1.636164e-46
MsG0480021350.01	MsG0780036719.01	0.807671	4.509985e-50	2.527215e-47
MsG0480021350.01	MsG0780036950.01	0.808034	3.776976e-50	2.136658e-47
MsG0480021350.01	MsG0780038386.01	0.840569	8.033925e-58	1.149020e-54
MsG0480021350.01	MsG0780038424.01	0.831530	1.584233e-55	1.724000e-52
MsG0480021350.01	MsG0780038495.01	0.804752	1.857595e-49	9.656402e-47
MsG0480021350.01	MsG0780038602.01	0.824716	6.941576e-54	6.198868e-51
MsG0480021350.01	MsG0780039137.01	0.809227	2.100467e-50	1.226359e-47
MsG0480021350.01	MsG0780039252.01	0.819358	1.211273e-52	9.299639e-50
MsG0480021350.01	MsG0780039655.01	0.818450	1.947924e-52	1.458741e-49
MsG0480021350.01	MsG0780039737.01	0.812469	4.174564e-51	2.656592e-48
MsG0480021350.01	MsG0780040044.01	0.809907	1.500456e-50	8.919646e-48
MsG0480021350.01	MsG0780040377.01	0.831157	1.957477e-55	2.106469e-52
MsG0480021350.01	MsG0780040488.01	0.818017	2.441412e-52	1.806381e-49
MsG0480021350.01	MsG0780040788.01	0.806211	9.184794e-50	4.956670e-47
MsG0480021350.01	MsG0880042232.01	0.808239	3.415531e-50	1.942777e-47
MsG0480021350.01	MsG0880042543.01	0.803087	4.120118e-49	2.051779e-46
MsG0480021350.01	MsG0880042698.01	0.815685	8.144695e-52	5.653737e-49
MsG0480021350.01	MsG0880042961.01	0.807742	4.356585e-50	2.445891e-47
MsG0480021350.01	MsG0880043491.01	0.835306	1.811708e-56	2.207003e-53
MsG0480021350.01	MsG0880044237.01	0.803404	3.542496e-49	1.778660e-46
MsG0480021350.01	MsG0880044415.01	0.804777	1.835138e-49	9.545549e-47
MsG0480021350.01	MsG0880044509.01	0.811287	7.549957e-51	4.654739e-48
MsG0480021350.01	MsG0880044510.01	0.821971	3.039197e-53	2.510077e-50
MsG0480021350.01	MsG0880044542.01	0.831363	1.741278e-55	1.885397e-52
MsG0480021350.01	MsG0880044554.01	0.852708	3.865296e-61	8.147104e-58
MsG0480021350.01	MsG0880044574.01	0.814929	1.199319e-51	8.154224e-49
MsG0480021350.01	MsG0880044644.01	0.800988	1.113096e-48	5.256157e-46
MsG0480021350.01	MsG0880045257.01	0.819400	1.185032e-52	9.109137e-50
MsG0480021350.01	MsG0880045583.01	0.806523	7.892832e-50	4.293277e-47
MsG0480021350.01	MsG0880046012.01	0.813098	3.039483e-51	1.966497e-48
MsG0480021350.01	MsG0880046479.01	0.821273	4.407747e-53	3.569332e-50
MsG0480021350.01	MsG0880046669.01	0.821134	4.743872e-53	3.827088e-50
MsG0480021350.01	MsG0880046762.01	0.819048	1.424662e-52	1.084578e-49
MsG0480021350.01	MsG0880047191.01	0.807058	6.084612e-50	3.355686e-47
MsG0380015566.01	MsG0480021350.01	0.801560	8.501023e-49	4.072208e-46
MsG0380015677.01	MsG0480021350.01	0.836363	9.780472e-57	1.229851e-53
MsG0380016102.01	MsG0480021350.01	0.826806	2.215989e-54	2.100115e-51
MsG0380016475.01	MsG0480021350.01	0.856004	4.310621e-62	1.014161e-58
MsG0380016765.01	MsG0480021350.01	0.834106	3.630110e-56	4.265251e-53
MsG0380016994.01	MsG0480021350.01	0.808990	2.360550e-50	1.369415e-47
MsG0380017233.01	MsG0480021350.01	0.818203	2.215500e-52	1.647668e-49
MsG0380017266.01	MsG0480021350.01	-0.817889	2.609244e-52	1.923800e-49
MsG0380017372.01	MsG0480021350.01	0.817884	2.615697e-52	1.928323e-49
MsG0480018163.01	MsG0480021350.01	0.801921	7.166283e-49	3.464451e-46
MsG0480018206.01	MsG0480021350.01	0.812927	3.313560e-51	2.134044e-48
MsG0280006456.01	MsG0480021350.01	0.823074	1.684750e-53	1.435885e-50
MsG0280007458.01	MsG0480021350.01	0.840810	6.946839e-58	1.001073e-54
MsG0280007609.01	MsG0480021350.01	0.827857	1.240749e-54	1.212586e-51
MsG0280008270.01	MsG0480021350.01	0.805585	1.243107e-49	6.601698e-47
MsG0280008280.01	MsG0480021350.01	0.822796	1.955344e-53	1.653358e-50
MsG0280008349.01	MsG0480021350.01	0.813581	2.380748e-51	1.560788e-48
MsG0280008615.01	MsG0480021350.01	0.830650	2.606264e-55	2.763000e-52
MsG0280009514.01	MsG0480021350.01	0.835353	1.763271e-56	2.150927e-53
MsG0280009748.01	MsG0480021350.01	0.803742	3.015292e-49	1.527144e-46
MsG0280009868.01	MsG0480021350.01	0.824403	8.225209e-54	7.277734e-51
MsG0280010389.01	MsG0480021350.01	0.832967	6.988365e-56	7.935424e-53
MsG0280010443.01	MsG0480021350.01	0.829274	5.643307e-55	5.748976e-52
MsG0280010491.01	MsG0480021350.01	0.806171	9.362109e-50	5.047243e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021350.01.T01	MTR_4g123470	36.364	209	130	1	21	229	19	224	1.68e-41	141
MsG0480021350.01.T01	MTR_1g090753	44.138	145	77	2	3	147	19	159	1.06e-32	117
MsG0480021350.01.T01	MTR_1g054495	26.471	204	145	3	13	215	7	206	3.07e-14	70.1
MsG0480021350.01.T01	MTR_8g468550	42.857	77	44	0	34	110	65	141	1.73e-13	66.6
MsG0480021350.01.T01	MTR_0014s0220	23.280	189	126	3	29	217	642	811	1.66e-12	67.0
MsG0480021350.01.T01	MTR_7g025150	24.074	216	153	5	4	217	3	209	4.46e-12	63.9
MsG0480021350.01.T01	MTR_4g085790	25.463	216	150	3	4	217	3	209	4.59e-12	63.9
MsG0480021350.01.T01	MTR_7g039210	26.404	178	102	3	32	180	28	205	1.74e-11	62.4
MsG0480021350.01.T01	MTR_1g054485	22.346	179	139	0	9	187	4	182	1.74e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 34 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGCCTAATATTGATGAATT+TGG	0.071532	4:+56940651	MsG0480021350.01.T01:CDS
TATAAGGCATTGTTAAAATT+TGG	0.194239	4:-56940440	None:intergenic
AAGAATTCCGCAATGAAAAT+TGG	0.202897	4:-56940351	None:intergenic
TGATGAATTTGGGACAAAAT+TGG	0.234698	4:+56940662	MsG0480021350.01.T01:CDS
TACTATGAAATCAATGATTA+TGG	0.240311	4:+56940492	MsG0480021350.01.T01:CDS
CATCTTCCTTTCATTCATAA+TGG	0.274505	4:+56940187	MsG0480021350.01.T01:CDS
GTCCCAAATTCATCAATATT+AGG	0.280924	4:-56940654	None:intergenic
GTTTAAGTGTGACTCAATTA+TGG	0.303074	4:+56940966	MsG0480021350.01.T01:CDS
TGCCTAATATTGATGAATTT+GGG	0.308974	4:+56940652	MsG0480021350.01.T01:CDS
CTAAATATGTAAAAGATATT+AGG	0.309400	4:-56940515	None:intergenic
ACCGTGGAAATTCGTTTGTT+TGG	0.318850	4:-56940578	None:intergenic
TCCCAACAAAAGGTAATATA+AGG	0.319342	4:-56940456	None:intergenic
TTGCATACAGTGATGAAATA+AGG	0.320941	4:-56940221	None:intergenic
GGAAATTCGTTTGTTTGGAT+TGG	0.329638	4:-56940573	None:intergenic
GAAATTCGTTTGTTTGGATT+GGG	0.339538	4:-56940572	None:intergenic
TGCGGAATTCTTCAATGAAC+TGG	0.345003	4:+56940362	MsG0480021350.01.T01:CDS
TTCCACATACACGTGTTTCA+TGG	0.348799	4:+56940549	MsG0480021350.01.T01:CDS
TTAAACTCTAAAATATCATT+TGG	0.369978	4:-56940949	None:intergenic
CAGATCTTACCAAATGACTT+TGG	0.384038	4:+56940763	MsG0480021350.01.T01:intron
TGCGAGTTATAGATGTAGTT+TGG	0.385150	4:-56940608	None:intergenic
CAATGAACTGGATGAACAAT+GGG	0.420513	4:+56940374	MsG0480021350.01.T01:CDS
ACACAAACTATTGTTAAGAT+AGG	0.424067	4:+56940886	MsG0480021350.01.T01:CDS
AATATTACAATACTTAAAAC+AGG	0.460074	4:-56941035	None:intergenic
TCCCAATGATTCCCAACAAA+AGG	0.467567	4:-56940466	None:intergenic
CATTCTCATTTACGATTGTG+TGG	0.506907	4:+56940808	MsG0480021350.01.T01:CDS
AGTGATGAAATAAGGTCTGT+TGG	0.517513	4:-56940213	None:intergenic
CATTATGAATGAAAGGAAGA+TGG	0.523264	4:-56940186	None:intergenic
TTGTTAAGATAGGACGTAGC+TGG	0.529092	4:+56940896	MsG0480021350.01.T01:CDS
GGTTAAATACAACAATGTGT+TGG	0.550805	4:-56940419	None:intergenic
TCAATGAACTGGATGAACAA+TGG	0.558244	4:+56940373	MsG0480021350.01.T01:CDS
GGCCATGAAACACGTGTATG+TGG	0.560867	4:-56940551	None:intergenic
TGGAGTCCATTATGAATGAA+AGG	0.569698	4:-56940193	None:intergenic
TCCAAACAAACGAATTTCCA+CGG	0.596587	4:+56940577	MsG0480021350.01.T01:CDS
GTAGTTTGGCTATGATACCG+TGG	0.697972	4:-56940594	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATATTATTTTTTAGCATAA+AGG	-	Chr4:56940926-56940945	None:intergenic	10.0%
!!	CTAAATATGTAAAAGATATT+AGG	-	Chr4:56940518-56940537	None:intergenic	15.0%
!!!	CTAATATCTTTTACATATTT+AGG	+	Chr4:56940516-56940535	MsG0480021350.01.T01:CDS	15.0%
!!!	TTAAACTCTAAAATATCATT+TGG	-	Chr4:56940952-56940971	None:intergenic	15.0%
!!	TACTATGAAATCAATGATTA+TGG	+	Chr4:56940492-56940511	MsG0480021350.01.T01:CDS	20.0%
!!!	TATAAGGCATTGTTAAAATT+TGG	-	Chr4:56940443-56940462	None:intergenic	20.0%
!	AAAAAAGATCCAAAGTCATT+TGG	-	Chr4:56940775-56940794	None:intergenic	25.0%
!	ACACAAACTATTGTTAAGAT+AGG	+	Chr4:56940886-56940905	MsG0480021350.01.T01:CDS	25.0%
!	ATGCCTAATATTGATGAATT+TGG	+	Chr4:56940651-56940670	MsG0480021350.01.T01:CDS	25.0%
!	TGCCTAATATTGATGAATTT+GGG	+	Chr4:56940652-56940671	MsG0480021350.01.T01:CDS	25.0%
!!	ACAACTGTCTTATATTTTTC+TGG	+	Chr4:56940694-56940713	MsG0480021350.01.T01:intron	25.0%
	AAGAATTCCGCAATGAAAAT+TGG	-	Chr4:56940354-56940373	None:intergenic	30.0%
	CACTGTATGCAAAAAAAATC+AGG	+	Chr4:56940232-56940251	MsG0480021350.01.T01:CDS	30.0%
	CATCTTCCTTTCATTCATAA+TGG	+	Chr4:56940187-56940206	MsG0480021350.01.T01:CDS	30.0%
	CATTATGAATGAAAGGAAGA+TGG	-	Chr4:56940189-56940208	None:intergenic	30.0%
	GAAATTCGTTTGTTTGGATT+GGG	-	Chr4:56940575-56940594	None:intergenic	30.0%
	GCATAAAAACCACAAAAGTT+GGG	-	Chr4:56940635-56940654	None:intergenic	30.0%
	GGTTAAATACAACAATGTGT+TGG	-	Chr4:56940422-56940441	None:intergenic	30.0%
	GTCCCAAATTCATCAATATT+AGG	-	Chr4:56940657-56940676	None:intergenic	30.0%
	GTTTAAGTGTGACTCAATTA+TGG	+	Chr4:56940966-56940985	MsG0480021350.01.T01:CDS	30.0%
	TCCCAACAAAAGGTAATATA+AGG	-	Chr4:56940459-56940478	None:intergenic	30.0%
	TTGCATACAGTGATGAAATA+AGG	-	Chr4:56940224-56940243	None:intergenic	30.0%
!	GCCTTATATTACCTTTTGTT+GGG	+	Chr4:56940455-56940474	MsG0480021350.01.T01:CDS	30.0%
!	TGATGAATTTGGGACAAAAT+TGG	+	Chr4:56940662-56940681	MsG0480021350.01.T01:CDS	30.0%
!	TGCCTTATATTACCTTTTGT+TGG	+	Chr4:56940454-56940473	MsG0480021350.01.T01:CDS	30.0%
!!!	GACTTTGGATCTTTTTTGAA+AGG	+	Chr4:56940778-56940797	MsG0480021350.01.T01:CDS	30.0%
	AGTGATGAAATAAGGTCTGT+TGG	-	Chr4:56940216-56940235	None:intergenic	35.0%
	ATTTGGTAAGATCTGCAAGA+AGG	-	Chr4:56940758-56940777	None:intergenic	35.0%
	CAATGAACTGGATGAACAAT+GGG	+	Chr4:56940374-56940393	MsG0480021350.01.T01:CDS	35.0%
	CAGATCTTACCAAATGACTT+TGG	+	Chr4:56940763-56940782	MsG0480021350.01.T01:intron	35.0%
	CATTCTCATTTACGATTGTG+TGG	+	Chr4:56940808-56940827	MsG0480021350.01.T01:CDS	35.0%
	GATCTGCAAGAAGGAAAAAA+TGG	-	Chr4:56940749-56940768	None:intergenic	35.0%
	GGAAATTCGTTTGTTTGGAT+TGG	-	Chr4:56940576-56940595	None:intergenic	35.0%
	GGCATAAAAACCACAAAAGT+TGG	-	Chr4:56940636-56940655	None:intergenic	35.0%
	TCAATGAACTGGATGAACAA+TGG	+	Chr4:56940373-56940392	MsG0480021350.01.T01:CDS	35.0%
	TCCAAACAAACGAATTTCCA+CGG	+	Chr4:56940577-56940596	MsG0480021350.01.T01:CDS	35.0%
	TGCGAGTTATAGATGTAGTT+TGG	-	Chr4:56940611-56940630	None:intergenic	35.0%
	TGGAGTCCATTATGAATGAA+AGG	-	Chr4:56940196-56940215	None:intergenic	35.0%
!	ACCTTTTGTTGGGAATCATT+GGG	+	Chr4:56940465-56940484	MsG0480021350.01.T01:CDS	35.0%
!	GCTTGATCCAATTTTCATTG+CGG	+	Chr4:56940344-56940363	MsG0480021350.01.T01:CDS	35.0%
!	TACCTTTTGTTGGGAATCAT+TGG	+	Chr4:56940464-56940483	MsG0480021350.01.T01:CDS	35.0%
	ACCGTGGAAATTCGTTTGTT+TGG	-	Chr4:56940581-56940600	None:intergenic	40.0%
	TCCCAATGATTCCCAACAAA+AGG	-	Chr4:56940469-56940488	None:intergenic	40.0%
	TGCGGAATTCTTCAATGAAC+TGG	+	Chr4:56940362-56940381	MsG0480021350.01.T01:CDS	40.0%
	TTCCACATACACGTGTTTCA+TGG	+	Chr4:56940549-56940568	MsG0480021350.01.T01:CDS	40.0%
	TTGTTAAGATAGGACGTAGC+TGG	+	Chr4:56940896-56940915	MsG0480021350.01.T01:CDS	40.0%
	GTAGTTTGGCTATGATACCG+TGG	-	Chr4:56940597-56940616	None:intergenic	45.0%
!	AACTCGCAACCCAACTTTTG+TGG	+	Chr4:56940623-56940642	MsG0480021350.01.T01:CDS	45.0%
	GATCAAGCTCAGCACTCATC+TGG	-	Chr4:56940332-56940351	None:intergenic	50.0%
	GGCCATGAAACACGTGTATG+TGG	-	Chr4:56940554-56940573	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	56940167	56941044	56940167	ID=MsG0480021350.01;Name=MsG0480021350.01
Chr4	mRNA	56940167	56941044	56940167	ID=MsG0480021350.01.T01;Parent=MsG0480021350.01;Name=MsG0480021350.01.T01;_AED=0.50;_eAED=0.54;_QI=0\|0\|0\|1\|0.5\|0.66\|3\|0\|238
Chr4	exon	56940167	56940253	56940167	ID=MsG0480021350.01.T01:exon:7131;Parent=MsG0480021350.01.T01
Chr4	exon	56940333	56940683	56940333	ID=MsG0480021350.01.T01:exon:7132;Parent=MsG0480021350.01.T01
Chr4	exon	56940766	56941044	56940766	ID=MsG0480021350.01.T01:exon:7133;Parent=MsG0480021350.01.T01
Chr4	CDS	56940167	56940253	56940167	ID=MsG0480021350.01.T01:cds;Parent=MsG0480021350.01.T01
Chr4	CDS	56940333	56940683	56940333	ID=MsG0480021350.01.T01:cds;Parent=MsG0480021350.01.T01
Chr4	CDS	56940766	56941044	56940766	ID=MsG0480021350.01.T01:cds;Parent=MsG0480021350.01.T01

Gene Sequence

>MsG0480021350.01.T01

TTGCAACACAATTTCATCTCCATCTTCCTTTCATTCATAATGGACTCCAACAGACCTTATTTCATCACTGTATGCAAAAAAAATCAGATGAGTGCTGAGCTTGATCCAATTTTCATTGCGGAATTCTTCAATGAACTGGATGAACAATGGGTCTTGATTGATGAAAATGAGAACCAACACATTGTTGTATTTAACCAAATTTTAACAATGCCTTATATTACCTTTTGTTGGGAATCATTGGGAATTTACTATGAAATCAATGATTATGGCCTAATATCTTTTACATATTTAGGTGAAAGTAAGTTCCACATACACGTGTTTCATGGCCCAATCCAAACAAACGAATTTCCACGGTATCATAGCCAAACTACATCTATAACTCGCAACCCAACTTTTGTGGTTTTTATGCCTAATATTGATGAATTTGGGACAAAATTGATCTTACCAAATGACTTTGGATCTTTTTTGAAAGGAAAAAAACATTCTCATTTACGATTGTGTGGATCGTCAAATTCTATCACAACTTGCAAGTTGTACTTTGAAGATAATCAACAACAAACACAAACTATTGTTAAGATAGGACGTAGCTGGACTACCTTTATGCTAAAAAATAATATTTATCCAAATGATATTTTAGAGTTTAAGTGTGACTCAATTATGGCAACAAATATTGTCATTGTAATCAAGTATGATGAAAGTTCAAGACACCTGTTTTAA

Protein sequence

>MsG0480021350.01.T01

LQHNFISIFLSFIMDSNRPYFITVCKKNQMSAELDPIFIAEFFNELDEQWVLIDENENQHIVVFNQILTMPYITFCWESLGIYYEINDYGLISFTYLGESKFHIHVFHGPIQTNEFPRYHSQTTSITRNPTFVVFMPNIDEFGTKLILPNDFGSFLKGKKHSHLRLCGSSNSITTCKLYFEDNQQQTQTIVKIGRSWTTFMLKNNIYPNDILEFKCDSIMATNIVIVIKYDESSRHLF*