AlfalfaGEDB | MsG0280007392.01

M. sativa cultivar ZhongmuNo.1 / MsG0280007392.01

KEGG: -
GO: -
PFAM: PF14380

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007392.01.T01	XP_013462873.1	98.387	124	2	0	37	160	197	320	2.42E-86	266

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007392.01.T01	A0A072V6F0	98.387	124	2	0	37	160	197	320	1.15e-86	266

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048461.01	MsG0280007392.01	0.801594	8.365317e-49	4.010519e-46
MsG0080048462.01	MsG0280007392.01	0.811096	8.303342e-51	5.093785e-48
MsG0080048856.01	MsG0280007392.01	0.823695	1.206269e-53	1.046379e-50
MsG0180000145.01	MsG0280007392.01	0.804014	2.647581e-49	1.350333e-46
MsG0180001892.01	MsG0280007392.01	0.824522	7.713609e-54	6.849009e-51
MsG0180003669.01	MsG0280007392.01	0.802506	5.433083e-49	2.665977e-46
MsG0180003920.01	MsG0280007392.01	0.801687	8.003921e-49	3.846426e-46
MsG0180004099.01	MsG0280007392.01	0.825527	4.466485e-54	4.081307e-51
MsG0180004389.01	MsG0280007392.01	0.816997	4.143657e-52	2.981598e-49
MsG0180004482.01	MsG0280007392.01	0.803719	3.048869e-49	1.543174e-46
MsG0180004754.01	MsG0280007392.01	0.807006	6.240421e-50	3.436978e-47
MsG0180004928.01	MsG0280007392.01	0.803484	3.410219e-49	1.715769e-46
MsG0180005250.01	MsG0280007392.01	0.814379	1.587344e-51	1.063435e-48
MsG0180005393.01	MsG0280007392.01	0.826661	2.399808e-54	2.264992e-51
MsG0180005575.01	MsG0280007392.01	0.813982	1.942797e-51	1.287517e-48
MsG0280007392.01	MsG0280007529.01	0.800333	1.514178e-48	7.031786e-46
MsG0280007392.01	MsG0280007955.01	0.830046	3.660592e-55	3.813166e-52
MsG0280007392.01	MsG0280009234.01	0.805010	1.640935e-49	8.586367e-47
MsG0280007392.01	MsG0280009794.01	0.801152	1.030181e-48	4.884629e-46
MsG0280007392.01	MsG0280010233.01	0.802228	6.198030e-49	3.019850e-46
MsG0280007392.01	MsG0280010489.01	0.810663	1.030547e-50	6.249604e-48
MsG0280007392.01	MsG0280010491.01	0.815557	8.698374e-52	6.016682e-49
MsG0280007392.01	MsG0280010980.01	0.801349	9.388608e-49	4.473661e-46
MsG0280007392.01	MsG0280011003.01	0.810555	1.087636e-50	6.576461e-48
MsG0280007392.01	MsG0280011013.01	0.800967	1.124180e-48	5.305496e-46
MsG0280007392.01	MsG0280011014.01	0.811807	5.821191e-51	3.638492e-48
MsG0280007392.01	MsG0280011101.01	0.808330	3.265133e-50	1.861763e-47
MsG0280007392.01	MsG0280011124.01	0.805846	1.096216e-49	5.860766e-47
MsG0280007392.01	MsG0280011258.01	0.813087	3.056350e-51	1.976847e-48
MsG0280007392.01	MsG0380011609.01	0.807003	6.249100e-50	3.441491e-47
MsG0280007392.01	MsG0380012460.01	0.806863	6.689758e-50	3.670974e-47
MsG0280007392.01	MsG0380012471.01	0.832143	1.118264e-55	1.238961e-52
MsG0280007392.01	MsG0380013475.01	0.822911	1.838462e-53	1.559674e-50
MsG0280007392.01	MsG0380013549.01	0.807649	4.560128e-50	2.553776e-47
MsG0280007392.01	MsG0380013834.01	0.828454	8.910739e-55	8.861357e-52
MsG0280007392.01	MsG0380014495.01	0.806788	6.940577e-50	3.801007e-47
MsG0280007392.01	MsG0380014537.01	0.818019	2.438316e-52	1.804190e-49
MsG0280007392.01	MsG0380014703.01	0.813217	2.862254e-51	1.857846e-48
MsG0280007392.01	MsG0380015332.01	0.804044	2.609793e-49	1.332068e-46
MsG0280007392.01	MsG0380015555.01	0.817042	4.047420e-52	2.915834e-49
MsG0280007392.01	MsG0380015631.01	0.811437	7.003799e-51	4.335448e-48
MsG0280007392.01	MsG0380015677.01	0.817102	3.923602e-52	2.831149e-49
MsG0280007392.01	MsG0380016970.01	0.812566	3.974370e-51	2.535532e-48
MsG0280007392.01	MsG0380016994.01	0.806565	7.732627e-50	4.210740e-47
MsG0280007392.01	MsG0480018163.01	0.812731	3.658358e-51	2.344091e-48
MsG0280007392.01	MsG0480020739.01	0.805132	1.547103e-49	8.121051e-47
MsG0280007392.01	MsG0480021465.01	0.804135	2.498033e-49	1.277998e-46
MsG0280007392.01	MsG0480022164.01	0.802682	4.996222e-49	2.462631e-46
MsG0280007392.01	MsG0480022985.01	0.806196	9.252651e-50	4.991266e-47
MsG0280007392.01	MsG0480023463.01	0.820923	5.305872e-53	4.255401e-50
MsG0280007392.01	MsG0480023873.01	0.800806	1.212348e-48	5.697877e-46
MsG0280007392.01	MsG0580024197.01	0.801221	9.972117e-49	4.736358e-46
MsG0280007392.01	MsG0580027091.01	0.817347	3.457715e-52	2.511767e-49
MsG0280007392.01	MsG0580027092.01	0.802276	6.057444e-49	2.955066e-46
MsG0280007392.01	MsG0580027431.01	0.802997	4.300353e-49	2.136641e-46
MsG0280007392.01	MsG0580028176.01	0.827145	1.838515e-54	1.759745e-51
MsG0280007392.01	MsG0580029640.01	0.814700	1.348279e-51	9.110941e-49
MsG0280007392.01	MsG0580029729.01	0.805386	1.368907e-49	7.232380e-47
MsG0280007392.01	MsG0580029926.01	0.802702	4.949662e-49	2.440984e-46
MsG0280007392.01	MsG0680031214.01	0.804715	1.891086e-49	9.820759e-47
MsG0280007392.01	MsG0680031549.01	0.807693	4.461454e-50	2.501407e-47
MsG0280007392.01	MsG0680035346.01	0.803736	3.023873e-49	1.531263e-46
MsG0280007392.01	MsG0680035475.01	0.804007	2.655867e-49	1.354319e-46
MsG0280007392.01	MsG0680035692.01	0.812509	4.091337e-51	2.606275e-48
MsG0280007392.01	MsG0780036477.01	0.815921	7.216849e-52	5.041708e-49
MsG0280007392.01	MsG0780036663.01	0.814710	1.341391e-51	9.066800e-49
MsG0280007392.01	MsG0780036719.01	0.809659	1.696146e-50	1.001771e-47
MsG0280007392.01	MsG0780036815.01	0.812770	3.586691e-51	2.300412e-48
MsG0280007392.01	MsG0780037054.01	0.813931	1.993701e-51	1.319435e-48
MsG0280007392.01	MsG0780038690.01	0.804068	2.579383e-49	1.317423e-46
MsG0280007392.01	MsG0780039137.01	0.811647	6.305439e-51	3.924447e-48
MsG0280007392.01	MsG0780039170.01	0.809431	1.898884e-50	1.114698e-47
MsG0280007392.01	MsG0780039243.01	0.852537	4.326875e-61	9.069414e-58
MsG0280007392.01	MsG0780039866.01	0.807253	5.531028e-50	3.065945e-47
MsG0280007392.01	MsG0780040044.01	0.802930	4.440467e-49	2.202560e-46
MsG0280007392.01	MsG0780040057.01	0.805320	1.412944e-49	7.452608e-47
MsG0280007392.01	MsG0780040841.01	0.830801	2.393259e-55	2.548624e-52
MsG0280007392.01	MsG0880042311.01	0.821009	5.070399e-53	4.076608e-50
MsG0280007392.01	MsG0880042518.01	0.804806	1.810162e-49	9.422916e-47
MsG0280007392.01	MsG0880042698.01	0.823899	1.080374e-53	9.424657e-51
MsG0280007392.01	MsG0880042779.01	0.800473	1.417472e-48	6.605926e-46
MsG0280007392.01	MsG0880043479.01	0.803167	3.967114e-49	1.979745e-46
MsG0280007392.01	MsG0880043480.01	0.806069	9.839028e-50	5.290324e-47
MsG0280007392.01	MsG0880046012.01	0.832874	7.367771e-56	8.342794e-53
MsG0280007392.01	MsG0880046479.01	0.808860	2.516047e-50	1.454581e-47
MsG0280007392.01	MsG0880047472.01	0.808928	2.433151e-50	1.409163e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007392.01.T01	MTR_2g023970	98.387	124	2	0	37	160	197	320	2.93e-90	266
MsG0280007392.01.T01	MTR_4g132450	76.000	125	29	1	37	160	210	334	2.86e-67	207

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007392.01.T01	AT1G11915	59.690	129	49	3	34	160	202	329	3.61e-46	153

Find 41 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTAGTTATGCTAGTGTTAT+TGG	0.193598	2:+14866577	MsG0280007392.01.T01:intron
TATGATCAAGTACCTGAATA+TGG	0.236309	2:+14866624	MsG0280007392.01.T01:CDS
TTGGAATTGGAGCTGGTATT+TGG	0.243382	2:+14867382	MsG0280007392.01.T01:CDS
TTATTTAGTAGGCATGGATA+TGG	0.313167	2:+14865107	MsG0280007392.01.T01:CDS
TTCTCAGCTGCAGGGGCAAT+TGG	0.337882	2:+14867363	MsG0280007392.01.T01:CDS
TCATGATTCATTTATTTAGT+AGG	0.341336	2:+14865096	None:intergenic
AAGAAATTGCACAGCACAAT+AGG	0.351853	2:+14867211	MsG0280007392.01.T01:CDS
TAGTGTTATTGGAGGGATAT+TGG	0.364003	2:+14866588	MsG0280007392.01.T01:intron
TTCTGTTACCTGCGATTACA+TGG	0.382922	2:-14867239	None:intergenic
TCAACTCTAATCCCATATTC+AGG	0.393312	2:-14866636	None:intergenic
GCTGCAGGGGCAATTGGAAT+TGG	0.402123	2:+14867369	MsG0280007392.01.T01:CDS
TTAGAATAGTCTATTATCAT+TGG	0.412158	2:-14867454	None:intergenic
TGAAGACAATGAGTTGTAAC+AGG	0.413119	2:-14866669	None:intergenic
ACTTACGCTCGGCTATTTGA+TGG	0.423509	2:-14865172	None:intergenic
TATTCAGGTACTTGATCATA+AGG	0.447126	2:-14866621	None:intergenic
AACTCATTGTCTTCAATGTC+AGG	0.451481	2:+14866677	MsG0280007392.01.T01:CDS
GTTACAGCATTCTCAGCTGC+AGG	0.468617	2:+14867354	MsG0280007392.01.T01:CDS
ATTCATTTATTTAGTAGGCA+TGG	0.480359	2:+14865101	MsG0280007392.01.T01:CDS
TTTATGTGTTTGTGTAAGGA+TGG	0.480529	2:+14866750	MsG0280007392.01.T01:CDS
ATGATCAAGTACCTGAATAT+GGG	0.489019	2:+14866625	MsG0280007392.01.T01:CDS
CTTACGCTCGGCTATTTGAT+GGG	0.506688	2:-14865171	None:intergenic
GGTACTTGATCATAAGGCTC+AGG	0.533579	2:-14866615	None:intergenic
GTTTGAACTCCACATGTGAC+TGG	0.542667	2:-14867432	None:intergenic
TCAATGTCAGGACACAATGA+AGG	0.545706	2:+14866689	MsG0280007392.01.T01:CDS
AGTTATGCTAGTGTTATTGG+AGG	0.547123	2:+14866580	MsG0280007392.01.T01:intron
TACGTTAGTTAACTTACGCT+CGG	0.557630	2:-14865183	None:intergenic
AACTCCACTACACATTGTAA+AGG	0.560482	2:+14866774	MsG0280007392.01.T01:CDS
GGGGCAATTGGAATTGGAGC+TGG	0.569061	2:+14867375	MsG0280007392.01.T01:CDS
AGGAAGGTCCATGTAATCGC+AGG	0.573932	2:+14867231	MsG0280007392.01.T01:CDS
TTACAGCATTCTCAGCTGCA+GGG	0.578537	2:+14867355	MsG0280007392.01.T01:CDS
CATACCTTTACAATGTGTAG+TGG	0.589945	2:-14866778	None:intergenic
CAGGACACAATGAAGGGTGG+TGG	0.591439	2:+14866696	MsG0280007392.01.T01:CDS
ATGAAGGGTGGTGGAACTTG+TGG	0.595707	2:+14866705	MsG0280007392.01.T01:CDS
TGGAACTTGTGGATTTGATA+CGG	0.599283	2:+14866716	MsG0280007392.01.T01:CDS
CAATGTCAGGACACAATGAA+GGG	0.621855	2:+14866690	MsG0280007392.01.T01:CDS
GTTATGCTAGTGTTATTGGA+GGG	0.622651	2:+14866581	MsG0280007392.01.T01:intron
TACAGCATTCTCAGCTGCAG+GGG	0.645559	2:+14867356	MsG0280007392.01.T01:CDS
AATTGCACAGCACAATAGGA+AGG	0.647476	2:+14867215	MsG0280007392.01.T01:CDS
GCTACTGCACCAGTCACATG+TGG	0.647888	2:+14867423	MsG0280007392.01.T01:CDS
TAGGCATGGATATGGATCAG+AGG	0.661376	2:+14865115	MsG0280007392.01.T01:CDS
TGTCAGGACACAATGAAGGG+TGG	0.712905	2:+14866693	MsG0280007392.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GAATAATCTAAATTATTATA+TGG	+	Chr2:14865572-14865591	MsG0280007392.01.T01:intron	10.0%
!!	ACATTGTAGTATAATTATAA+TGG	-	Chr2:14865997-14866016	None:intergenic	15.0%
!!	TTTAGATTATTCAAAGTTAT+AGG	-	Chr2:14865564-14865583	None:intergenic	15.0%
!!!	AACGACTTTTTTTTTTTTTT+TGG	-	Chr2:14867085-14867104	None:intergenic	15.0%
!!!	GATTTAAATATTTTCAAATG+TGG	+	Chr2:14865618-14865637	MsG0280007392.01.T01:intron	15.0%
!!	AATACCTTAAACAATAGTTA+AGG	+	Chr2:14865405-14865424	MsG0280007392.01.T01:intron	20.0%
!!	ACACATAATTCAATAGAATA+GGG	-	Chr2:14866816-14866835	None:intergenic	20.0%
!!	CTTTAAGTGCTAAATAAAAT+TGG	-	Chr2:14865502-14865521	None:intergenic	20.0%
!!	TACACATAATTCAATAGAAT+AGG	-	Chr2:14866817-14866836	None:intergenic	20.0%
!!	TACTGAAATAACAAAAACTT+GGG	+	Chr2:14867291-14867310	MsG0280007392.01.T01:intron	20.0%
!!	TATTCCTTAACTATTGTTTA+AGG	-	Chr2:14865412-14865431	None:intergenic	20.0%
!!	TTACTGAAATAACAAAAACT+TGG	+	Chr2:14867290-14867309	MsG0280007392.01.T01:intron	20.0%
!!	TTAGAATAGTCTATTATCAT+TGG	-	Chr2:14867457-14867476	None:intergenic	20.0%
!!!	AATCAAATAAGACTTTTTCT+TGG	+	Chr2:14865306-14865325	MsG0280007392.01.T01:intron	20.0%
!!!	AGAAAAAGTCTTATTTGATT+TGG	-	Chr2:14865306-14865325	None:intergenic	20.0%
!!!	ATGATTAATTGTACTAGTTT+CGG	-	Chr2:14866865-14866884	None:intergenic	20.0%
!!!	ATTTAATTTTGTAGTGACTA+TGG	-	Chr2:14865949-14865968	None:intergenic	20.0%
!!!	TTTTTTTTTGGTACAAAAGA+GGG	-	Chr2:14867073-14867092	None:intergenic	20.0%
!!!	TTTTTTTTTTGGTACAAAAG+AGG	-	Chr2:14867074-14867093	None:intergenic	20.0%
!	AAAAAAAAAAAGTCGTTCAC+AGG	+	Chr2:14867088-14867107	MsG0280007392.01.T01:intron	25.0%
!	ATATTCTCTCATTCAACTTA+AGG	-	Chr2:14867159-14867178	None:intergenic	25.0%
!	ATTCATTTATTTAGTAGGCA+TGG	+	Chr2:14865101-14865120	MsG0280007392.01.T01:CDS	25.0%
!	TACCTATAATAGTGTTATGT+TGG	-	Chr2:14866999-14867018	None:intergenic	25.0%
!	TATAGCTTATGTTATGAACT+TGG	-	Chr2:14866220-14866239	None:intergenic	25.0%
!	TTAGAAGAAAATTGCTCTTT+AGG	+	Chr2:14865344-14865363	MsG0280007392.01.T01:intron	25.0%
!	TTGATTGTCTAATGTTTGTT+TGG	+	Chr2:14867182-14867201	MsG0280007392.01.T01:intron	25.0%
!!	TGATTAATTGTACTAGTTTC+GGG	-	Chr2:14866864-14866883	None:intergenic	25.0%
!!!	CTTATTTGATTTGGTCTTTA+GGG	-	Chr2:14865297-14865316	None:intergenic	25.0%
!!!	TCTTATTTGATTTGGTCTTT+AGG	-	Chr2:14865298-14865317	None:intergenic	25.0%
!!!	TTTACTTTTGCTTTATGCAT+TGG	-	Chr2:14865821-14865840	None:intergenic	25.0%
	ACAATAGACACATATCAAGA+CGG	+	Chr2:14866972-14866991	MsG0280007392.01.T01:intron	30.0%
	ACTAGTTATGCTAGTGTTAT+TGG	+	Chr2:14866577-14866596	MsG0280007392.01.T01:intron	30.0%
	AGGAAAATGTTCACAAACAT+AGG	-	Chr2:14866416-14866435	None:intergenic	30.0%
	ATGATCAAGTACCTGAATAT+GGG	+	Chr2:14866625-14866644	MsG0280007392.01.T01:CDS	30.0%
	CATAGATTAAAGAAACCAGA+GGG	+	Chr2:14865852-14865871	MsG0280007392.01.T01:intron	30.0%
	GTCCAACATAACACTATTAT+AGG	+	Chr2:14866994-14867013	MsG0280007392.01.T01:intron	30.0%
	TAATGATCAATGTGTCTATG+AGG	-	Chr2:14865760-14865779	None:intergenic	30.0%
	TATGATCAAGTACCTGAATA+TGG	+	Chr2:14866624-14866643	MsG0280007392.01.T01:CDS	30.0%
	TATTCAGGTACTTGATCATA+AGG	-	Chr2:14866624-14866643	None:intergenic	30.0%
	TCATAGATTAAAGAAACCAG+AGG	+	Chr2:14865851-14865870	MsG0280007392.01.T01:intron	30.0%
	TGATATGTGTCTATTGTTGA+CGG	-	Chr2:14866969-14866988	None:intergenic	30.0%
	TTATTTAGTAGGCATGGATA+TGG	+	Chr2:14865107-14865126	MsG0280007392.01.T01:CDS	30.0%
	TTTATGTGTTTGTGTAAGGA+TGG	+	Chr2:14866750-14866769	MsG0280007392.01.T01:CDS	30.0%
	TTTGCAGAGTCATATTACAA+GGG	-	Chr2:14865654-14865673	None:intergenic	30.0%
!	TCTCTAGAAATTAAAGCTCA+CGG	-	Chr2:14866919-14866938	None:intergenic	30.0%
!	TTTTGCAGAGTCATATTACA+AGG	-	Chr2:14865655-14865674	None:intergenic	30.0%
!!	GAGTTTTATGTGTTTGTGTA+AGG	+	Chr2:14866746-14866765	MsG0280007392.01.T01:CDS	30.0%
!!	GGAAGAGTGTTGAAAAATTA+AGG	-	Chr2:14865928-14865947	None:intergenic	30.0%
!!	TGATTGATTTTGTTGTGACT+AGG	-	Chr2:14866054-14866073	None:intergenic	30.0%
!!	TTGCTTTTATATATTCCCTC+TGG	-	Chr2:14865870-14865889	None:intergenic	30.0%
!!!	GTTCAAGTTTTTTTCTGAGT+CGG	-	Chr2:14866175-14866194	None:intergenic	30.0%
	AACTCATTGTCTTCAATGTC+AGG	+	Chr2:14866677-14866696	MsG0280007392.01.T01:CDS	35.0%
	AACTCCACTACACATTGTAA+AGG	+	Chr2:14866774-14866793	MsG0280007392.01.T01:CDS	35.0%
	AAGAAATTGCACAGCACAAT+AGG	+	Chr2:14867211-14867230	MsG0280007392.01.T01:CDS	35.0%
	AAGAGAGAATGTCTGTAGTA+TGG	-	Chr2:14866149-14866168	None:intergenic	35.0%
	ACACAAATAAAGTCGTTCAC+AGG	+	Chr2:14867042-14867061	MsG0280007392.01.T01:intron	35.0%
	ACATTTCCACATGAATGGAT+CGG	-	Chr2:14866264-14866283	None:intergenic	35.0%
	ACTTATGCAGACATTTACCA+GGG	+	Chr2:14866470-14866489	MsG0280007392.01.T01:intron	35.0%
	ATCTTCACCACTGAAAAAGT+AGG	+	Chr2:14865729-14865748	MsG0280007392.01.T01:intron	35.0%
	ATGTTCACAAACATAGGCTT+TGG	-	Chr2:14866410-14866429	None:intergenic	35.0%
	CAAAAGCAAGTGAATCTTTG+AGG	+	Chr2:14866536-14866555	MsG0280007392.01.T01:intron	35.0%
	CAAGATGAATCACAATGTTC+AGG	-	Chr2:14866436-14866455	None:intergenic	35.0%
	CATACCTTTACAATGTGTAG+TGG	-	Chr2:14866781-14866800	None:intergenic	35.0%
	CATCCATCATCAATGCTAAA+CGG	-	Chr2:14866119-14866138	None:intergenic	35.0%
	GAGAATGAGCAAAAACAGAT+GGG	+	Chr2:14865232-14865251	MsG0280007392.01.T01:intron	35.0%
	GATATGTGTCTATTGTTGAC+GGG	-	Chr2:14866968-14866987	None:intergenic	35.0%
	GTGCTAGTGTCTAAACTAAA+TGG	-	Chr2:14866317-14866336	None:intergenic	35.0%
	TACGTTAGTTAACTTACGCT+CGG	-	Chr2:14865186-14865205	None:intergenic	35.0%
	TACTTATGCAGACATTTACC+AGG	+	Chr2:14866469-14866488	MsG0280007392.01.T01:intron	35.0%
	TCAACTCTAATCCCATATTC+AGG	-	Chr2:14866639-14866658	None:intergenic	35.0%
	TGAAGACAATGAGTTGTAAC+AGG	-	Chr2:14866672-14866691	None:intergenic	35.0%
	TGGAACTTGTGGATTTGATA+CGG	+	Chr2:14866716-14866735	MsG0280007392.01.T01:CDS	35.0%
!	AGTTATGCTAGTGTTATTGG+AGG	+	Chr2:14866580-14866599	MsG0280007392.01.T01:intron	35.0%
!	ATTGTACTAGTTTCGGGTAA+AGG	-	Chr2:14866858-14866877	None:intergenic	35.0%
!	CTCAAAGATTCACTTGCTTT+TGG	-	Chr2:14866538-14866557	None:intergenic	35.0%
!	GAGCTTTAATTTCTAGAGAG+CGG	+	Chr2:14866920-14866939	MsG0280007392.01.T01:intron	35.0%
!	GTTATGCTAGTGTTATTGGA+GGG	+	Chr2:14866581-14866600	MsG0280007392.01.T01:intron	35.0%
!	TAGTGTTATTGGAGGGATAT+TGG	+	Chr2:14866588-14866607	MsG0280007392.01.T01:intron	35.0%
!	TGCTTTATGCATTGGTAAGT+TGG	-	Chr2:14865813-14865832	None:intergenic	35.0%
!	TTGTACTAGTTTCGGGTAAA+GGG	-	Chr2:14866857-14866876	None:intergenic	35.0%
!!	GTGTATTTTTCAGCATACGT+AGG	+	Chr2:14865207-14865226	MsG0280007392.01.T01:intron	35.0%
!!	GTTGTTTTGTCTTGGAATTG+TGG	+	Chr2:14867320-14867339	MsG0280007392.01.T01:intron	35.0%
!!	TATCCGTTTAGCATTGATGA+TGG	+	Chr2:14866113-14866132	MsG0280007392.01.T01:intron	35.0%
!!	TTTAGCATTGATGATGGATG+TGG	+	Chr2:14866119-14866138	MsG0280007392.01.T01:intron	35.0%
!!!	GGTTTTTCCTACTTTTTCAG+TGG	-	Chr2:14865739-14865758	None:intergenic	35.0%
	AATTGCACAGCACAATAGGA+AGG	+	Chr2:14867215-14867234	MsG0280007392.01.T01:CDS	40.0%
	AGCATATGCAGAACTTCTTG+TGG	+	Chr2:14866074-14866093	MsG0280007392.01.T01:intron	40.0%
	CAATGTCAGGACACAATGAA+GGG	+	Chr2:14866690-14866709	MsG0280007392.01.T01:CDS	40.0%
	CGAGAATGAGCAAAAACAGA+TGG	+	Chr2:14865231-14865250	MsG0280007392.01.T01:intron	40.0%
	GCAATTCTCTCGATCAGATT+TGG	+	Chr2:14865261-14865280	MsG0280007392.01.T01:intron	40.0%
	GGGAATGAGCAAAAACAGAT+GGG	-	Chr2:14865154-14865173	None:intergenic	40.0%
	GTCTTGGAATTGTGGTTTCA+GGG	+	Chr2:14867328-14867347	MsG0280007392.01.T01:intron	40.0%
	GTTAGAGAAAAAGAACACCC+TGG	-	Chr2:14866490-14866509	None:intergenic	40.0%
	TCAATGTCAGGACACAATGA+AGG	+	Chr2:14866689-14866708	MsG0280007392.01.T01:CDS	40.0%
	TCATAATGCCTGAGAGCAAA+TGG	-	Chr2:14865376-14865395	None:intergenic	40.0%
	TCCATTCATGTGGAAATGTG+AGG	+	Chr2:14866265-14866284	MsG0280007392.01.T01:intron	40.0%
	TCCTCACATTTCCACATGAA+TGG	-	Chr2:14866269-14866288	None:intergenic	40.0%
	TCTAAACTAAATGGTCGCGT+AGG	-	Chr2:14866308-14866327	None:intergenic	40.0%
	TGACTAGGAGTAAAGAGAGA+AGG	-	Chr2:14866039-14866058	None:intergenic	40.0%
	TGGGAATGAGCAAAAACAGA+TGG	-	Chr2:14865155-14865174	None:intergenic	40.0%
	TGTCTTGGAATTGTGGTTTC+AGG	+	Chr2:14867327-14867346	MsG0280007392.01.T01:intron	40.0%
	TTCATGTGGAAATGTGAGGA+TGG	+	Chr2:14866269-14866288	MsG0280007392.01.T01:intron	40.0%
	TTCTGTTACCTGCGATTACA+TGG	-	Chr2:14867242-14867261	None:intergenic	40.0%
	TTGGAATTGGAGCTGGTATT+TGG	+	Chr2:14867382-14867401	MsG0280007392.01.T01:CDS	40.0%
!!	AAGTTGGTGACACAGAAAGA+AGG	-	Chr2:14865797-14865816	None:intergenic	40.0%
!!	GTTATGAACTTGGTATCGAC+CGG	-	Chr2:14866210-14866229	None:intergenic	40.0%
!!!	GGCTCATTGTTGTTTTGTCT+TGG	+	Chr2:14867312-14867331	MsG0280007392.01.T01:intron	40.0%
	AATGCCTGAGAGCAAATGGT+GGG	-	Chr2:14865372-14865391	None:intergenic	45.0%
	ACTTACGCTCGGCTATTTGA+TGG	-	Chr2:14865175-14865194	None:intergenic	45.0%
	CTAGGAGTAAAGAGAGAAGG+AGG	-	Chr2:14866036-14866055	None:intergenic	45.0%
	CTTACGCTCGGCTATTTGAT+GGG	-	Chr2:14865174-14865193	None:intergenic	45.0%
	CTTGAACTCAGAACACCTTC+CGG	+	Chr2:14866188-14866207	MsG0280007392.01.T01:intron	45.0%
	GGTACTTGATCATAAGGCTC+AGG	-	Chr2:14866618-14866637	None:intergenic	45.0%
	GTTTGAACTCCACATGTGAC+TGG	-	Chr2:14867435-14867454	None:intergenic	45.0%
	TAATGCCTGAGAGCAAATGG+TGG	-	Chr2:14865373-14865392	None:intergenic	45.0%
	TAGGCATGGATATGGATCAG+AGG	+	Chr2:14865115-14865134	MsG0280007392.01.T01:CDS	45.0%
	TTACAGCATTCTCAGCTGCA+GGG	+	Chr2:14867355-14867374	MsG0280007392.01.T01:CDS	45.0%
	TTGTCACCGATCCATTCATG+TGG	+	Chr2:14866255-14866274	MsG0280007392.01.T01:intron	45.0%
!	CGATCAGATTTGGTCAGGTT+GGG	+	Chr2:14865271-14865290	MsG0280007392.01.T01:intron	45.0%
!	TCGATCAGATTTGGTCAGGT+TGG	+	Chr2:14865270-14865289	MsG0280007392.01.T01:intron	45.0%
!	TCTCTCGATCAGATTTGGTC+AGG	+	Chr2:14865266-14865285	MsG0280007392.01.T01:intron	45.0%
!!	GACTTTTTCTTGGCGCAATG+TGG	+	Chr2:14865316-14865335	MsG0280007392.01.T01:intron	45.0%
!!	TTAAATAAAAAAAAAATCAT+AGG	+	Chr2:14865534-14865553	MsG0280007392.01.T01:intron	5.0%
	AGGAAGGTCCATGTAATCGC+AGG	+	Chr2:14867231-14867250	MsG0280007392.01.T01:CDS	50.0%
	GTTACAGCATTCTCAGCTGC+AGG	+	Chr2:14867354-14867373	MsG0280007392.01.T01:CDS	50.0%
	TACAGCATTCTCAGCTGCAG+GGG	+	Chr2:14867356-14867375	MsG0280007392.01.T01:CDS	50.0%
	TGTCAGGACACAATGAAGGG+TGG	+	Chr2:14866693-14866712	MsG0280007392.01.T01:CDS	50.0%
!!	ATGAAGGGTGGTGGAACTTG+TGG	+	Chr2:14866705-14866724	MsG0280007392.01.T01:CDS	50.0%
!!	TGAACTTGGTATCGACCGGA+AGG	-	Chr2:14866206-14866225	None:intergenic	50.0%
	CAGGACACAATGAAGGGTGG+TGG	+	Chr2:14866696-14866715	MsG0280007392.01.T01:CDS	55.0%
	GCTACTGCACCAGTCACATG+TGG	+	Chr2:14867423-14867442	MsG0280007392.01.T01:CDS	55.0%
	GCTGCAGGGGCAATTGGAAT+TGG	+	Chr2:14867369-14867388	MsG0280007392.01.T01:CDS	55.0%
	GGATCGGTGACAACGATGTG+AGG	-	Chr2:14866248-14866267	None:intergenic	55.0%
	GGGGCAATTGGAATTGGAGC+TGG	+	Chr2:14867375-14867394	MsG0280007392.01.T01:CDS	55.0%
	TTCTCAGCTGCAGGGGCAAT+TGG	+	Chr2:14867363-14867382	MsG0280007392.01.T01:CDS	55.0%
	GGCACCCACCATTTGCTCTC+AGG	+	Chr2:14865365-14865384	MsG0280007392.01.T01:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	14865098	14867476	14865098	ID=MsG0280007392.01;Name=MsG0280007392.01
Chr2	mRNA	14865098	14867476	14865098	ID=MsG0280007392.01.T01;Parent=MsG0280007392.01;Name=MsG0280007392.01.T01;_AED=0.44;_eAED=0.44;_QI=0\|0\|0\|0.75\|1\|1\|4\|0\|160
Chr2	exon	14865098	14865202	14865098	ID=MsG0280007392.01.T01:exon:4122;Parent=MsG0280007392.01.T01
Chr2	exon	14866591	14866795	14866591	ID=MsG0280007392.01.T01:exon:4123;Parent=MsG0280007392.01.T01
Chr2	exon	14867208	14867252	14867208	ID=MsG0280007392.01.T01:exon:4124;Parent=MsG0280007392.01.T01
Chr2	exon	14867349	14867476	14867349	ID=MsG0280007392.01.T01:exon:4125;Parent=MsG0280007392.01.T01
Chr2	CDS	14865098	14865202	14865098	ID=MsG0280007392.01.T01:cds;Parent=MsG0280007392.01.T01
Chr2	CDS	14866591	14866795	14866591	ID=MsG0280007392.01.T01:cds;Parent=MsG0280007392.01.T01
Chr2	CDS	14867208	14867252	14867208	ID=MsG0280007392.01.T01:cds;Parent=MsG0280007392.01.T01
Chr2	CDS	14867349	14867476	14867349	ID=MsG0280007392.01.T01:cds;Parent=MsG0280007392.01.T01

Gene Sequence

>MsG0280007392.01.T01

ATGATTCATTTATTTAGTAGGCATGGATATGGATCAGAGGTTGTTGCTCTTCTCCCATCTGTTTTTGCTCATTCCCATCAAATAGCCGAGCGTAAGTTAACTAACTGTTATTGGAGGGATATTGGTTTTCCTGAGCCTTATGATCAAGTACCTGAATATGGGATTAGAGTTGATTTTGATATTCCTGTTACAACTCATTGTCTTCAATGTCAGGACACAATGAAGGGTGGTGGAACTTGTGGATTTGATACGGTGACACAGAGTTTTATGTGTTTGTGTAAGGATGGAAACTCCACTACACATTGTAAAGATCAAGAAATTGCACAGCACAATAGGAAGGTCCATGTAATCGCAGGGACAGTTACAGCATTCTCAGCTGCAGGGGCAATTGGAATTGGAGCTGGTATTTGGTACTTGAAGAAATTGAGAGCTACTGCACCAGTCACATGTGGAGTTCAAACCAATGATAATAGACTATTCTAA

Protein sequence

>MsG0280007392.01.T01

MIHLFSRHGYGSEVVALLPSVFAHSHQIAERKLTNCYWRDIGFPEPYDQVPEYGIRVDFDIPVTTHCLQCQDTMKGGGTCGFDTVTQSFMCLCKDGNSTTHCKDQEIAQHNRKVHVIAGTVTAFSAAGAIGIGAGIWYLKKLRATAPVTCGVQTNDNRLF*