AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013507.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013507.01.T01 MTR_3g449950 96.785 311 10 0 135 445 1 311 0.0 613
MsG0380013507.01.T01 MTR_3g449990 66.436 289 88 3 135 415 1 288 4.50e-111 339
MsG0380013507.01.T01 MTR_5g090420 57.785 289 107 5 135 415 1 282 1.52e-88 280
MsG0380013507.01.T01 MTR_1g069345 32.212 208 132 3 180 386 7 206 4.27e-23 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013507.01.T01 AT5G08560 47.584 269 125 5 135 389 1 267 1.91e-68 228
MsG0380013507.01.T01 AT5G08560 47.584 269 125 5 135 389 1 267 1.91e-68 228
MsG0380013507.01.T01 AT5G08560 47.584 269 125 5 135 389 1 267 1.91e-68 228
MsG0380013507.01.T01 AT5G43920 33.333 240 152 5 180 415 7 242 3.35e-26 111

Find 99 sgRNAs with CRISPR-Local

Find 530 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATGGAATCATTTCCTATT+AGG 0.128911 3:+39665689 MsG0380013507.01.T01:CDS
AAGATGGTAATAACTATAAT+AGG 0.211250 3:+39665606 MsG0380013507.01.T01:CDS
GGAATTTAATCAACTTAATA+TGG 0.212711 3:+39665672 MsG0380013507.01.T01:CDS
TATGGAATCATTTCCTATTA+GGG 0.246059 3:+39665690 MsG0380013507.01.T01:CDS
AGATTATATATTGGAATATA+AGG 0.253644 3:+39665886 MsG0380013507.01.T01:CDS
CGTCGTCCCCTTCGGCTGAT+AGG 0.254634 3:-39671712 None:intergenic
TCTGGCCAAGGTGGTTCTTC+CGG 0.265995 3:+39672121 MsG0380013507.01.T01:CDS
TCAATGTTACCAACCCTAAT+AGG 0.283663 3:-39665703 None:intergenic
TTTAATGAAGAAGCCGATAA+TGG 0.286702 3:+39665731 MsG0380013507.01.T01:CDS
CTGGCCAAGGTGGTTCTTCC+GGG 0.287686 3:+39672122 MsG0380013507.01.T01:CDS
ATTTGCATCTAGGCGGTCTT+TGG 0.290225 3:+39671549 MsG0380013507.01.T01:CDS
AACTTGTCCAGAGCTGATTT+TGG 0.291966 3:+39672400 MsG0380013507.01.T01:CDS
TATTGTTGGTTATTATTTCA+TGG 0.307034 3:+39671580 MsG0380013507.01.T01:CDS
GAGGAGGAGGGGTTCGAAAT+AGG 0.313413 3:-39672507 None:intergenic
ACCTAATAGTTCATCTTCTA+TGG 0.313662 3:+39671649 MsG0380013507.01.T01:CDS
CTTAGATGAAGATTATATAT+TGG 0.323065 3:+39665877 MsG0380013507.01.T01:CDS
GAAGTATAAGCTTGATTAGT+AGG 0.346896 3:-39672349 None:intergenic
CTGTTTATGCAGCAAGTACT+TGG 0.358690 3:+39671878 MsG0380013507.01.T01:CDS
AGCAAGTACTTGGCGGTGAT+TGG 0.361938 3:+39671888 MsG0380013507.01.T01:CDS
CTAGCCACATTGAAACAAAT+TGG 0.364435 3:+39671920 MsG0380013507.01.T01:CDS
TCTAACAAGCATCCCATTAT+CGG 0.384902 3:-39665744 None:intergenic
AGGTAATTTAGATGGGGAAT+TGG 0.393241 3:-39665915 None:intergenic
TCTTCTATGGAGCACGTTGT+AGG 0.395510 3:+39671662 MsG0380013507.01.T01:CDS
GACGAAGTTGTTGGCACAAA+AGG 0.398912 3:+39671731 MsG0380013507.01.T01:CDS
TGAGCTTATTGATGGGGATA+AGG 0.407133 3:+39672003 MsG0380013507.01.T01:CDS
TTGTGTAGAAATTTGCATCT+AGG 0.414637 3:+39671539 MsG0380013507.01.T01:intron
GTCGTCCCCTTCGGCTGATA+GGG 0.419548 3:-39671711 None:intergenic
ATTGTTGGTTATTATTTCAT+GGG 0.422226 3:+39671581 MsG0380013507.01.T01:CDS
TTAATGAAGAAGCCGATAAT+GGG 0.423553 3:+39665732 MsG0380013507.01.T01:CDS
CATCTAAATTACCTTTCAAA+AGG 0.425984 3:+39665924 MsG0380013507.01.T01:CDS
AGGCTCAACAAGTGTCTTGA+TGG 0.432246 3:+39671682 MsG0380013507.01.T01:CDS
TCCATAGAAGATGAACTATT+AGG 0.439662 3:-39671650 None:intergenic
TTTAAAATCTATTGAGGAGG+AGG 0.444056 3:-39672520 None:intergenic
TGCATCTAGGCGGTCTTTGG+AGG 0.447235 3:+39671552 MsG0380013507.01.T01:CDS
TCCTGCTTCATGTCACCCTC+TGG 0.448042 3:+39672103 MsG0380013507.01.T01:CDS
AGATGGTAATAACTATAATA+GGG 0.453992 3:+39665607 MsG0380013507.01.T01:CDS
CCCATTATGGCTAACAAAGA+TGG 0.459987 3:+39665590 None:intergenic
AAATCTTCCAAAATCAGCTC+TGG 0.468825 3:-39672407 None:intergenic
ACCAAGAGAATACATCGCTT+TGG 0.476220 3:-39671789 None:intergenic
TTAAAATCTATTGAGGAGGA+GGG 0.486898 3:-39672519 None:intergenic
TTCATGTCACCCTCTGGCCA+AGG 0.491036 3:+39672109 MsG0380013507.01.T01:CDS
GATTATATATTGGAATATAA+GGG 0.491095 3:+39665887 MsG0380013507.01.T01:CDS
AACAACTTCGTCGTCCCCTT+CGG 0.491520 3:-39671720 None:intergenic
ACATAATTTAAAATCTATTG+AGG 0.496725 3:-39672526 None:intergenic
GCAAGTACTTGGCGGTGATT+GGG 0.500806 3:+39671889 MsG0380013507.01.T01:CDS
GAATCATTTCCTATTAGGGT+TGG 0.500943 3:+39665694 MsG0380013507.01.T01:CDS
AGAAGATGAAAGCATCGTTA+AGG 0.501049 3:+39671946 MsG0380013507.01.T01:CDS
ACCAAAGCGATGTATTCTCT+TGG 0.502163 3:+39671788 MsG0380013507.01.T01:CDS
GAACACCTAGAGGAGGAGTC+TGG 0.502621 3:+39671827 MsG0380013507.01.T01:CDS
TAGATCACCACAGGTTGTGC+AGG 0.507833 3:+39665763 MsG0380013507.01.T01:CDS
GTTGGTTATTATTTCATGGG+AGG 0.514010 3:+39671584 MsG0380013507.01.T01:CDS
TTCCTTGTGTCGCAACGCGT+TGG 0.514667 3:+39672279 MsG0380013507.01.T01:CDS
TGTTTCTGATGATAACGAAT+CGG 0.517284 3:+39672375 MsG0380013507.01.T01:CDS
GCCAGAGGGTGACATGAAGC+AGG 0.519258 3:-39672104 None:intergenic
ATCCAACGCGTTGCGACACA+AGG 0.527126 3:-39672281 None:intergenic
TGCCCTTACAAAATCTCGCC+CGG 0.534345 3:-39672140 None:intergenic
ATTTGTCAGTACCGCTGAAA+GGG 0.538652 3:+39672426 MsG0380013507.01.T01:CDS
TCGTCATGTTCAGATGACTT+TGG 0.542727 3:+39672313 MsG0380013507.01.T01:CDS
GAAGGGGACGACGAAGTTGT+TGG 0.544222 3:+39671722 MsG0380013507.01.T01:CDS
ACGAAGTTGTTGGCACAAAA+GGG 0.550371 3:+39671732 MsG0380013507.01.T01:CDS
TCAGGTATCATTACAGTCGA+GGG 0.553135 3:-39672205 None:intergenic
GTATGCCAGACTCCTCCTCT+AGG 0.556041 3:-39671832 None:intergenic
CAAGGAAGCTACTCGTTCCA+TGG 0.556398 3:-39672263 None:intergenic
AGCTACTCGTTCCATGGTGA+GGG 0.556455 3:-39672257 None:intergenic
TTCAGGTATCATTACAGTCG+AGG 0.557702 3:-39672206 None:intergenic
TTTATGCAGCAAGTACTTGG+CGG 0.558318 3:+39671881 MsG0380013507.01.T01:CDS
TAAAATCTATTGAGGAGGAG+GGG 0.564663 3:-39672518 None:intergenic
TTATTATTTCATGGGAGGTG+TGG 0.569082 3:+39671589 MsG0380013507.01.T01:CDS
CTGCTCCAATATTAAAAGTG+AGG 0.572912 3:-39671972 None:intergenic
CATGTCAAGCTCTTCCGTGT+TGG 0.573245 3:-39665650 None:intergenic
GAAGAACCACCTTGGCCAGA+GGG 0.573757 3:-39672118 None:intergenic
AAGCTACTCGTTCCATGGTG+AGG 0.576410 3:-39672258 None:intergenic
GATTTGTCAGTACCGCTGAA+AGG 0.580821 3:+39672425 MsG0380013507.01.T01:CDS
TTTGAAAGGTAATTTAGATG+GGG 0.591342 3:-39665921 None:intergenic
GTTCCGCCCCTATCAGCCGA+AGG 0.592030 3:+39671704 MsG0380013507.01.T01:CDS
GATGCTTGTTAGATCACCAC+AGG 0.593163 3:+39665754 MsG0380013507.01.T01:CDS
TCGTCCCCTTCGGCTGATAG+GGG 0.593696 3:-39671710 None:intergenic
ATGTCACCCTCTGGCCAAGG+TGG 0.595449 3:+39672112 MsG0380013507.01.T01:CDS
TTCCGCCCCTATCAGCCGAA+GGG 0.600746 3:+39671705 MsG0380013507.01.T01:CDS
TATACCAATTTGTTTCAATG+TGG 0.605452 3:-39671924 None:intergenic
TCCCCTTCGGCTGATAGGGG+CGG 0.605832 3:-39671707 None:intergenic
TAGCTTGTCCACCCTTTCAG+CGG 0.608187 3:-39672437 None:intergenic
CTCGCCCGGAAGAACCACCT+TGG 0.608997 3:-39672126 None:intergenic
TCCGCCCCTATCAGCCGAAG+GGG 0.620269 3:+39671706 MsG0380013507.01.T01:CDS
TAATTTAAAATCTATTGAGG+AGG 0.624087 3:-39672523 None:intergenic
TGTCAGTACCGCTGAAAGGG+TGG 0.626294 3:+39672429 MsG0380013507.01.T01:CDS
TTTACCGCAGACGAATTCAA+AGG 0.627122 3:-39671854 None:intergenic
GGAAGAACCACCTTGGCCAG+AGG 0.628654 3:-39672119 None:intergenic
TCGAGGCATTGAATACATTG+AGG 0.634411 3:+39672029 MsG0380013507.01.T01:CDS
TGAGTTTCCTGCACAACCTG+TGG 0.638038 3:-39665770 None:intergenic
CAGGTATCATTACAGTCGAG+GGG 0.643753 3:-39672204 None:intergenic
CAACACGGAAGAGCTTGACA+TGG 0.647908 3:+39665651 MsG0380013507.01.T01:CDS
GAGTGGGGAACACCTAGAGG+AGG 0.656225 3:+39671820 MsG0380013507.01.T01:CDS
CATACCTTTGAATTCGTCTG+CGG 0.656627 3:+39671850 MsG0380013507.01.T01:CDS
TGTAGAAATTTGCATCTAGG+CGG 0.670359 3:+39671542 MsG0380013507.01.T01:intron
AAATCGGTTGAAACTGCTGG+AGG 0.679706 3:+39672165 MsG0380013507.01.T01:CDS
AAAGAGTGGGGAACACCTAG+AGG 0.683816 3:+39671817 MsG0380013507.01.T01:CDS
AGTTGAACAAGCCCTCACCA+TGG 0.691356 3:+39672246 MsG0380013507.01.T01:CDS
TGATGGGGATAAGGTCATCG+AGG 0.725311 3:+39672012 MsG0380013507.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAAATAATTAATT+TGG + Chr3:39668532-39668551 MsG0380013507.01.T01:intron 0.0%
!! AAAAATTAAATAATTAATTT+GGG + Chr3:39668533-39668552 MsG0380013507.01.T01:intron 0.0%
!! AAAATGAAAAAAAAAACAAA+TGG - Chr3:39667647-39667666 None:intergenic 10.0%
!! AAATGTTTATGAATTTATTT+GGG + Chr3:39667356-39667375 MsG0380013507.01.T01:intron 10.0%
!! AATCAAATTAAATAGTAATA+TGG + Chr3:39670985-39671004 MsG0380013507.01.T01:intron 10.0%
!! ACTAATTATAAAAAAGAATA+CGG - Chr3:39670706-39670725 None:intergenic 10.0%
!! ATAAAAAAAGATTAAAAACA+TGG + Chr3:39668994-39669013 MsG0380013507.01.T01:intron 10.0%
!! ATCAAATTAAATAGTAATAT+GGG + Chr3:39670986-39671005 MsG0380013507.01.T01:intron 10.0%
!!! ACTTTTGTAATTTAATTTTT+TGG + Chr3:39667234-39667253 MsG0380013507.01.T01:intron 10.0%
!!! ATGTTATTATTTTAGTTTTA+TGG + Chr3:39671435-39671454 MsG0380013507.01.T01:intron 10.0%
!!! ATTTAATTTTTTTATTCGAA+GGG - Chr3:39668524-39668543 None:intergenic 10.0%
!!! ATTTCTCAATTTTTTTTTAA+GGG + Chr3:39668656-39668675 MsG0380013507.01.T01:intron 10.0%
!!! CTTTTGTAATTTAATTTTTT+GGG + Chr3:39667235-39667254 MsG0380013507.01.T01:intron 10.0%
!!! TATTTAATTTTTTTATTCGA+AGG - Chr3:39668525-39668544 None:intergenic 10.0%
!!! TGTTTTTAATCTTTTTTTAT+TGG - Chr3:39668994-39669013 None:intergenic 10.0%
!!! TTCAATTTTTTACTAATTTA+GGG + Chr3:39669840-39669859 MsG0380013507.01.T01:intron 10.0%
!!! TTTTGTAATTTAATTTTTTG+GGG + Chr3:39667236-39667255 MsG0380013507.01.T01:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + Chr3:39671187-39671206 MsG0380013507.01.T01:intron 100.0%
!! AAAAAAAAAACAAATGGAAA+TGG - Chr3:39667641-39667660 None:intergenic 15.0%
!! AAGAAAAATAACATTAGAAA+AGG + Chr3:39668556-39668575 MsG0380013507.01.T01:intron 15.0%
!! AATTTGAAAAATGAAATTAG+GGG + Chr3:39667261-39667280 MsG0380013507.01.T01:intron 15.0%
!! AGATTATATATTGGAATATA+AGG + Chr3:39665886-39665905 MsG0380013507.01.T01:CDS 15.0%
!! CAAATGTTTATGAATTTATT+TGG + Chr3:39667355-39667374 MsG0380013507.01.T01:intron 15.0%
!! CAATTTGAAAAATGAAATTA+GGG + Chr3:39667260-39667279 MsG0380013507.01.T01:intron 15.0%
!! CTAATTATAAAAAAGAATAC+GGG - Chr3:39670705-39670724 None:intergenic 15.0%
!! GATTATATATTGGAATATAA+GGG + Chr3:39665887-39665906 MsG0380013507.01.T01:CDS 15.0%
!! TCAATTTGAAAAATGAAATT+AGG + Chr3:39667259-39667278 MsG0380013507.01.T01:intron 15.0%
!! TTGATTATTTATTTATGTTG+TGG + Chr3:39671504-39671523 MsG0380013507.01.T01:intron 15.0%
!!! ACAAATTTCAAAAATTTTGA+GGG + Chr3:39667291-39667310 MsG0380013507.01.T01:intron 15.0%
!!! ATAATTTTTGGAAAATTTTG+AGG + Chr3:39667322-39667341 MsG0380013507.01.T01:intron 15.0%
!!! ATATTTTAGGAAAAAAATAG+TGG - Chr3:39670735-39670754 None:intergenic 15.0%
!!! ATTTTTCAAATTTTGCATTT+TGG - Chr3:39667412-39667431 None:intergenic 15.0%
!!! CATTTCTCAATTTTTTTTTA+AGG + Chr3:39668655-39668674 MsG0380013507.01.T01:intron 15.0%
!!! CTAAAATTTTCAATAATGAA+TGG + Chr3:39666342-39666361 MsG0380013507.01.T01:intron 15.0%
!!! GTTCAATTTTTTACTAATTT+AGG + Chr3:39669839-39669858 MsG0380013507.01.T01:intron 15.0%
!!! TAATTTTTGGAAAATTTTGA+GGG + Chr3:39667323-39667342 MsG0380013507.01.T01:intron 15.0%
!!! TACAAATTTCAAAAATTTTG+AGG + Chr3:39667290-39667309 MsG0380013507.01.T01:intron 15.0%
!!! TATAGGGATTAATTTTTTTA+GGG + Chr3:39669954-39669973 MsG0380013507.01.T01:intron 15.0%
!!! TCAAAACAAAGAATTAATTT+TGG - Chr3:39668097-39668116 None:intergenic 15.0%
!!! TCATTATTTTTACTTTAAGT+AGG + Chr3:39666919-39666938 MsG0380013507.01.T01:intron 15.0%
!!! TGATTTTCTAGTTTTTTTTA+GGG + Chr3:39669888-39669907 MsG0380013507.01.T01:intron 15.0%
!!! TTGATTTTCTAGTTTTTTTT+AGG + Chr3:39669887-39669906 MsG0380013507.01.T01:intron 15.0%
!!! TTTAATTTTTTTATTCGAAG+GGG - Chr3:39668523-39668542 None:intergenic 15.0%
!!! TTTTTTTCCTAAAATATGAT+TGG + Chr3:39670738-39670757 MsG0380013507.01.T01:intron 15.0%
!!! TTTTTTTTTTAACTTCATTG+TGG + Chr3:39667682-39667701 MsG0380013507.01.T01:intron 15.0%
!! AAAAGAAAATAGTGTGATTA+AGG - Chr3:39668480-39668499 None:intergenic 20.0%
!! AAGATGGTAATAACTATAAT+AGG + Chr3:39665606-39665625 MsG0380013507.01.T01:CDS 20.0%
!! AGATGGTAATAACTATAATA+GGG + Chr3:39665607-39665626 MsG0380013507.01.T01:CDS 20.0%
!! AGTTTGAAAAGAAAGAAAAA+TGG - Chr3:39671145-39671164 None:intergenic 20.0%
!! ATTCATTTGATTATCAAACA+AGG - Chr3:39666864-39666883 None:intergenic 20.0%
!! CATCAATCCATTAAAAAAAA+TGG - Chr3:39666560-39666579 None:intergenic 20.0%
!! CTTAGATGAAGATTATATAT+TGG + Chr3:39665877-39665896 MsG0380013507.01.T01:CDS 20.0%
!! GCAAATTGTTCAAAAAAAAA+TGG - Chr3:39669179-39669198 None:intergenic 20.0%
!! GGAATTTAATCAACTTAATA+TGG + Chr3:39665672-39665691 MsG0380013507.01.T01:CDS 20.0%
!! GTTTGAAAAGAAAGAAAAAT+GGG - Chr3:39671144-39671163 None:intergenic 20.0%
!! TAAGAGTCTATGAAAATAAA+TGG - Chr3:39667794-39667813 None:intergenic 20.0%
!! TCATTCCTAAATATTATGTT+TGG + Chr3:39667174-39667193 MsG0380013507.01.T01:intron 20.0%
!! TCTATGAAAATAAATGGAAA+TGG - Chr3:39667788-39667807 None:intergenic 20.0%
!! TTAGTGAAAAATTTGCAAAT+TGG - Chr3:39668388-39668407 None:intergenic 20.0%
!! TTCACATATAAACTCTAAAT+TGG - Chr3:39670417-39670436 None:intergenic 20.0%
!! TTCTTGTATTATTCTTACAA+AGG + Chr3:39666593-39666612 MsG0380013507.01.T01:intron 20.0%
!!! AAATTTTTTGAGCTTATTGA+TGG + Chr3:39671995-39672014 MsG0380013507.01.T01:CDS 20.0%
!!! AATTTTTGGAAAATTTTGAG+GGG + Chr3:39667324-39667343 MsG0380013507.01.T01:intron 20.0%
!!! AATTTTTTGAGCTTATTGAT+GGG + Chr3:39671996-39672015 MsG0380013507.01.T01:CDS 20.0%
!!! ACAAAATTGTGTCATATTTT+TGG + Chr3:39667208-39667227 MsG0380013507.01.T01:intron 20.0%
!!! ACATTAACATTCACTTTTTA+AGG - Chr3:39669130-39669149 None:intergenic 20.0%
!!! ACTTTTTCTCTTTATTGTTT+TGG - Chr3:39669233-39669252 None:intergenic 20.0%
!!! ATTGATTTCATCCAATAAAA+AGG + Chr3:39669415-39669434 MsG0380013507.01.T01:intron 20.0%
!!! ATTGTTGGTTATTATTTCAT+GGG + Chr3:39671581-39671600 MsG0380013507.01.T01:CDS 20.0%
!!! CAAAATTGTGTCATATTTTT+GGG + Chr3:39667209-39667228 MsG0380013507.01.T01:intron 20.0%
!!! CAAATTTCAAAAATTTTGAG+GGG + Chr3:39667292-39667311 MsG0380013507.01.T01:intron 20.0%
!!! CATTAACATTCACTTTTTAA+GGG - Chr3:39669129-39669148 None:intergenic 20.0%
!!! GTATAGGGATTAATTTTTTT+AGG + Chr3:39669953-39669972 MsG0380013507.01.T01:intron 20.0%
!!! TATTGTTGGTTATTATTTCA+TGG + Chr3:39671580-39671599 MsG0380013507.01.T01:CDS 20.0%
!!! TATTTGCATTTTCTATTGAA+AGG - Chr3:39667920-39667939 None:intergenic 20.0%
!!! TTAATTCTCTCAATTTTGTT+GGG - Chr3:39669512-39669531 None:intergenic 20.0%
!!! TTTTGAAAGGTAATTTAGAT+GGG - Chr3:39665925-39665944 None:intergenic 20.0%
!!! TTTTTTTTTGAACAATTTGC+AGG + Chr3:39669179-39669198 MsG0380013507.01.T01:intron 20.0%
! AACCTCTTATGAAAAAAACA+AGG + Chr3:39666452-39666471 MsG0380013507.01.T01:intron 25.0%
! AACTTATTTAATGTGTGTCT+TGG + Chr3:39668020-39668039 MsG0380013507.01.T01:intron 25.0%
! AATTAAATAGTAATATGGGC+CGG + Chr3:39670990-39671009 MsG0380013507.01.T01:intron 25.0%
! AGCAAGAAAAGAATAAGAAT+CGG - Chr3:39669754-39669773 None:intergenic 25.0%
! AGTTAGGGTTTATGAATTTA+GGG + Chr3:39669931-39669950 MsG0380013507.01.T01:intron 25.0%
! ATATGGAATCATTTCCTATT+AGG + Chr3:39665689-39665708 MsG0380013507.01.T01:CDS 25.0%
! ATCATTTCAGCATGATATAT+AGG - Chr3:39666637-39666656 None:intergenic 25.0%
! ATCTATAACTGAACTACATT+TGG + Chr3:39666655-39666674 MsG0380013507.01.T01:intron 25.0%
! ATTTGATTATCAAACAAGGA+GGG - Chr3:39666860-39666879 None:intergenic 25.0%
! CAACAAAATTGAGAGAATTA+AGG + Chr3:39669511-39669530 MsG0380013507.01.T01:intron 25.0%
! CATCTAAATTACCTTTCAAA+AGG + Chr3:39665924-39665943 MsG0380013507.01.T01:CDS 25.0%
! CTTATGAAAAAAACAAGGTA+AGG + Chr3:39666457-39666476 MsG0380013507.01.T01:intron 25.0%
! GAAATATAGTAATAACTGTG+TGG + Chr3:39666808-39666827 MsG0380013507.01.T01:intron 25.0%
! GAGTTTATATGTGAATTTGT+TGG + Chr3:39670422-39670441 MsG0380013507.01.T01:intron 25.0%
! GATCTTTACTCAATTTCTTA+GGG - Chr3:39668731-39668750 None:intergenic 25.0%
! GGAAAACTAAAATTTCATGA+AGG - Chr3:39668459-39668478 None:intergenic 25.0%
! GTAAAATACTCTTTGTGATT+TGG + Chr3:39668248-39668267 MsG0380013507.01.T01:intron 25.0%
! GTGTAATTGAAAATAGCAAA+AGG + Chr3:39670348-39670367 MsG0380013507.01.T01:intron 25.0%
! TAAAATTTCATGAAGGATGA+TGG - Chr3:39668452-39668471 None:intergenic 25.0%
! TATGGAATCATTTCCTATTA+GGG + Chr3:39665690-39665709 MsG0380013507.01.T01:CDS 25.0%
! TCAAATTATTACCCAAACAA+TGG + Chr3:39667539-39667558 MsG0380013507.01.T01:intron 25.0%
! TCCATCCAAACATAATATTT+AGG - Chr3:39667182-39667201 None:intergenic 25.0%
! TCCTAAATATTATGTTTGGA+TGG + Chr3:39667178-39667197 MsG0380013507.01.T01:intron 25.0%
! TCGGTAATTATAAACTCAAA+TGG + Chr3:39670384-39670403 MsG0380013507.01.T01:intron 25.0%
! TCTTTGTAAAGAGAACATAA+GGG + Chr3:39671379-39671398 MsG0380013507.01.T01:intron 25.0%
! TGTTGTTAGAATAAAAGAAG+AGG + Chr3:39669299-39669318 MsG0380013507.01.T01:intron 25.0%
! TTCTAACAACATGTTGTATT+TGG - Chr3:39669290-39669309 None:intergenic 25.0%
! TTGAGATATATAACTCGTTA+TGG - Chr3:39668002-39668021 None:intergenic 25.0%
! TTGGTCATTTAAAAACTAGA+GGG + Chr3:39671354-39671373 MsG0380013507.01.T01:intron 25.0%
! TTGTGTGGAATGATATATTT+GGG + Chr3:39666737-39666756 MsG0380013507.01.T01:intron 25.0%
! TTTGAAAGGTAATTTAGATG+GGG - Chr3:39665924-39665943 None:intergenic 25.0%
!! AAATAGCATAACCTTTTGAA+AGG - Chr3:39665938-39665957 None:intergenic 25.0%
!! AATTTTGTTCTTTTCAAAGC+TGG - Chr3:39671626-39671645 None:intergenic 25.0%
!! ACTTTCATTCACCTTTTTAT+TGG - Chr3:39669429-39669448 None:intergenic 25.0%
!! AGGGGTCAAATTATAATTTT+TGG + Chr3:39667310-39667329 MsG0380013507.01.T01:intron 25.0%
!! ATTTTGTAAGGGCAAAAAAT+CGG + Chr3:39672149-39672168 MsG0380013507.01.T01:CDS 25.0%
!! CTTAATTCTCTCAATTTTGT+TGG - Chr3:39669513-39669532 None:intergenic 25.0%
!! CTTACAACAAGTTGAATTTA+TGG + Chr3:39667810-39667829 MsG0380013507.01.T01:intron 25.0%
!! GGTTTAGTAATTTAGAGTTA+GGG + Chr3:39669916-39669935 MsG0380013507.01.T01:intron 25.0%
!! GTTTATGAATTTAGGGTATA+GGG + Chr3:39669938-39669957 MsG0380013507.01.T01:intron 25.0%
!! TATACCAATTTGTTTCAATG+TGG - Chr3:39671927-39671946 None:intergenic 25.0%
!! TCATATTGTTATTAGCACTT+CGG + Chr3:39666114-39666133 MsG0380013507.01.T01:intron 25.0%
!! TCTTTTTCTGTAACTTCATA+TGG + Chr3:39667002-39667021 MsG0380013507.01.T01:intron 25.0%
!! TGGTATAGATATGTGTTTTA+CGG - Chr3:39669562-39669581 None:intergenic 25.0%
!! TGGTTTAGTAATTTAGAGTT+AGG + Chr3:39669915-39669934 MsG0380013507.01.T01:intron 25.0%
!! TGTTCATCCAATCATATTTT+AGG - Chr3:39670748-39670767 None:intergenic 25.0%
!! TTGGGTCAAATTGAAAATTT+TGG + Chr3:39667374-39667393 MsG0380013507.01.T01:intron 25.0%
!! TTTGAAGGATTTAGAATTCT+AGG + Chr3:39667123-39667142 MsG0380013507.01.T01:intron 25.0%
!! TTTTCTATTGAAAGGTTGAA+TGG - Chr3:39667912-39667931 None:intergenic 25.0%
!! TTTTTGCCCATACAAAAATT+GGG - Chr3:39671044-39671063 None:intergenic 25.0%
!!! AGCATTTTGAAACACTTATT+TGG - Chr3:39671465-39671484 None:intergenic 25.0%
!!! ATTTTTTGAGCTTATTGATG+GGG + Chr3:39671997-39672016 MsG0380013507.01.T01:CDS 25.0%
!!! CTACTTATATTTCTAGAATG+AGG + Chr3:39666204-39666223 MsG0380013507.01.T01:intron 25.0%
!!! CTAGTTTTTTTTAGGGTTTA+TGG + Chr3:39669895-39669914 MsG0380013507.01.T01:intron 25.0%
!!! CTTTCAAGTTTATGAAAATG+TGG + Chr3:39666681-39666700 MsG0380013507.01.T01:intron 25.0%
!!! CTTTTGAAAGGTAATTTAGA+TGG - Chr3:39665926-39665945 None:intergenic 25.0%
!!! CTTTTTTTATTGGTCGAAAT+AGG - Chr3:39668984-39669003 None:intergenic 25.0%
!!! TACCTTGTTTTTTTCATAAG+AGG - Chr3:39666457-39666476 None:intergenic 25.0%
!!! TCTAACAGTGTATATTTTGA+GGG + Chr3:39671293-39671312 MsG0380013507.01.T01:intron 25.0%
!!! TCTTATTGGTTTATATCAAG+TGG - Chr3:39668753-39668772 None:intergenic 25.0%
!!! TTTTTTGCCCATACAAAAAT+TGG - Chr3:39671045-39671064 None:intergenic 25.0%
AAAAGGATTCAATATTGCGT+CGG + Chr3:39670365-39670384 MsG0380013507.01.T01:intron 30.0%
AAAAGGGAGCTTAAAAAGAA+GGG + Chr3:39671748-39671767 MsG0380013507.01.T01:CDS 30.0%
AAACATCAACAAAATTGTGG+AGG + Chr3:39668357-39668376 MsG0380013507.01.T01:intron 30.0%
AACTTCATATGGAGTGAAAT+TGG + Chr3:39667013-39667032 MsG0380013507.01.T01:intron 30.0%
ACCATGACAATACACAAATA+AGG + Chr3:39666486-39666505 MsG0380013507.01.T01:intron 30.0%
ACCTAATAGTTCATCTTCTA+TGG + Chr3:39671649-39671668 MsG0380013507.01.T01:CDS 30.0%
ACCTTATTCATAGAAGATCA+TGG + Chr3:39671260-39671279 MsG0380013507.01.T01:intron 30.0%
ACGATTTACTTCATAACATG+TGG + Chr3:39666068-39666087 MsG0380013507.01.T01:intron 30.0%
AGAAATGAGTTCCATAGAAA+AGG - Chr3:39668642-39668661 None:intergenic 30.0%
ATAATGTGATTAGTGTTGTG+TGG + Chr3:39666722-39666741 MsG0380013507.01.T01:intron 30.0%
ATAGGACAATGATTAGATTC+TGG - Chr3:39666619-39666638 None:intergenic 30.0%
ATCAAATTCCAATACCCTAA+AGG - Chr3:39669872-39669891 None:intergenic 30.0%
CAAAATATACACTGTTAGAC+TGG - Chr3:39671292-39671311 None:intergenic 30.0%
CAGAGATAGAAAAGAGAAAT+CGG + Chr3:39669614-39669633 MsG0380013507.01.T01:intron 30.0%
CATGACAATACACAAATAAG+GGG + Chr3:39666488-39666507 MsG0380013507.01.T01:intron 30.0%
CATTAAAAAAAATGGCAACC+CGG - Chr3:39666552-39666571 None:intergenic 30.0%
CATTTGATTATCAAACAAGG+AGG - Chr3:39666861-39666880 None:intergenic 30.0%
CCATGACAATACACAAATAA+GGG + Chr3:39666487-39666506 MsG0380013507.01.T01:intron 30.0%
CCTTATTCATAGAAGATCAT+GGG + Chr3:39671261-39671280 MsG0380013507.01.T01:intron 30.0%
CGATTTACTTCATAACATGT+GGG + Chr3:39666069-39666088 MsG0380013507.01.T01:intron 30.0%
CTGTAATTACAATCAATGTC+CGG - Chr3:39670037-39670056 None:intergenic 30.0%
GAAGTATAAGCTTGATTAGT+AGG - Chr3:39672352-39672371 None:intergenic 30.0%
GAATGTGTAGTTCTTGATAA+TGG - Chr3:39667888-39667907 None:intergenic 30.0%
GAGTTAGGGTTTATGAATTT+AGG + Chr3:39669930-39669949 MsG0380013507.01.T01:intron 30.0%
GATCATCCATAAATCATCAA+AGG - Chr3:39666271-39666290 None:intergenic 30.0%
GATTTACTTCATAACATGTG+GGG + Chr3:39666070-39666089 MsG0380013507.01.T01:intron 30.0%
GGATCTTTACTCAATTTCTT+AGG - Chr3:39668732-39668751 None:intergenic 30.0%
GTCAAACATCAACAAAATTG+TGG + Chr3:39668354-39668373 MsG0380013507.01.T01:intron 30.0%
GTCTTTGTAAAGAGAACATA+AGG + Chr3:39671378-39671397 MsG0380013507.01.T01:intron 30.0%
GTTGGTCATTTAAAAACTAG+AGG + Chr3:39671353-39671372 MsG0380013507.01.T01:intron 30.0%
GTTGTGTGGAATGATATATT+TGG + Chr3:39666736-39666755 MsG0380013507.01.T01:intron 30.0%
TAAAAAGAAGGGAGTTTGTA+AGG + Chr3:39671759-39671778 MsG0380013507.01.T01:CDS 30.0%
TAAAGTTGTTGTCATATGAC+TGG + Chr3:39666402-39666421 MsG0380013507.01.T01:intron 30.0%
TAGAGTAAACGTTGAAAAGA+TGG - Chr3:39669047-39669066 None:intergenic 30.0%
TCAATAAGCAGAGAGAAAAA+TGG - Chr3:39668794-39668813 None:intergenic 30.0%
TCCATAGAAGATGAACTATT+AGG - Chr3:39671653-39671672 None:intergenic 30.0%
TGAAACACTCACTTTCTTAT+TGG - Chr3:39668767-39668786 None:intergenic 30.0%
TTAATGAAGAAGCCGATAAT+GGG + Chr3:39665732-39665751 MsG0380013507.01.T01:CDS 30.0%
TTATAAAAAAGAATACGGGC+CGG - Chr3:39670701-39670720 None:intergenic 30.0%
TTGTGTAGAAATTTGCATCT+AGG + Chr3:39671539-39671558 MsG0380013507.01.T01:intron 30.0%
TTTAATGAAGAAGCCGATAA+TGG + Chr3:39665731-39665750 MsG0380013507.01.T01:CDS 30.0%
! AATAGGGAATCTCATGTTTT+AGG + Chr3:39665623-39665642 MsG0380013507.01.T01:CDS 30.0%
! AATTTAGGGTTTATGCCTTT+AGG + Chr3:39669854-39669873 MsG0380013507.01.T01:intron 30.0%
! AGATGTTCTAATCTCTTTTC+AGG - Chr3:39672226-39672245 None:intergenic 30.0%
! AGCTAGCTTGTAAAATTGTT+GGG + Chr3:39669985-39670004 MsG0380013507.01.T01:intron 30.0%
! ATAGGGAATCTCATGTTTTA+GGG + Chr3:39665624-39665643 MsG0380013507.01.T01:CDS 30.0%
! ATCAACACATTTCTTTTACC+TGG + Chr3:39666137-39666156 MsG0380013507.01.T01:intron 30.0%
! ATTACTCGAATTTTGCTACA+TGG - Chr3:39668208-39668227 None:intergenic 30.0%
! ATTTAGGGTTTATGCCTTTA+GGG + Chr3:39669855-39669874 MsG0380013507.01.T01:intron 30.0%
! ATTTCACTTCTCCTTTTCTA+TGG + Chr3:39668628-39668647 MsG0380013507.01.T01:intron 30.0%
! CCATTTTCATTTCAAAGTGT+AGG - Chr3:39669383-39669402 None:intergenic 30.0%
! GATAAAGTGTTTGTATTCCA+TGG + Chr3:39668115-39668134 MsG0380013507.01.T01:intron 30.0%
! GGGTAATTGAGAAATTTTGA+AGG + Chr3:39667108-39667127 MsG0380013507.01.T01:intron 30.0%
! GGTATAGATATGTGTTTTAC+GGG - Chr3:39669561-39669580 None:intergenic 30.0%
! GGTTTATGAATTTAGGGTAT+AGG + Chr3:39669937-39669956 MsG0380013507.01.T01:intron 30.0%
! GTCTAACAGTGTATATTTTG+AGG + Chr3:39671292-39671311 MsG0380013507.01.T01:intron 30.0%
! TAGCTAGCTTGTAAAATTGT+TGG + Chr3:39669984-39670003 MsG0380013507.01.T01:intron 30.0%
! TGATCTCCTTTGATGATTTA+TGG + Chr3:39666262-39666281 MsG0380013507.01.T01:intron 30.0%
! TGGATGAACATAAAAGTGTA+AGG + Chr3:39670758-39670777 MsG0380013507.01.T01:intron 30.0%
! TGTTTCTGATGATAACGAAT+CGG + Chr3:39672375-39672394 MsG0380013507.01.T01:CDS 30.0%
! TTACTCGAATTTTGCTACAT+GGG - Chr3:39668207-39668226 None:intergenic 30.0%
! TTTACCTGAATTTTACTGCA+GGG - Chr3:39668233-39668252 None:intergenic 30.0%
! TTTTACCTGAATTTTACTGC+AGG - Chr3:39668234-39668253 None:intergenic 30.0%
!! AATGGATTGATGTTTCAAGA+GGG + Chr3:39666360-39666379 MsG0380013507.01.T01:intron 30.0%
!! CCTACACTTTGAAATGAAAA+TGG + Chr3:39669380-39669399 MsG0380013507.01.T01:intron 30.0%
!! CTTGATAATGGTCACAAATA+AGG - Chr3:39667876-39667895 None:intergenic 30.0%
!! CTTTGAAATGAAAATGGAAC+AGG + Chr3:39669386-39669405 MsG0380013507.01.T01:intron 30.0%
!! GCTTTAAAAAACTATCGATG+GGG - Chr3:39667619-39667638 None:intergenic 30.0%
!! GGCTTTAAAAAACTATCGAT+GGG - Chr3:39667620-39667639 None:intergenic 30.0%
!! TGGCTTTAAAAAACTATCGA+TGG - Chr3:39667621-39667640 None:intergenic 30.0%
!!! GCTTTGAAATTTTATCACAC+AGG + Chr3:39666226-39666245 MsG0380013507.01.T01:intron 30.0%
AAAAAATCGGTTGAAACTGC+TGG + Chr3:39672162-39672181 MsG0380013507.01.T01:CDS 35.0%
AAAAGAAAGAAAAATGGGCC+GGG - Chr3:39671139-39671158 None:intergenic 35.0%
AAATCTTCCAAAATCAGCTC+TGG - Chr3:39672410-39672429 None:intergenic 35.0%
AACTGTGTCTATCTCTTATG+TGG + Chr3:39670488-39670507 MsG0380013507.01.T01:intron 35.0%
AAGCAATTAAGCAAGGTTGT+TGG + Chr3:39671335-39671354 MsG0380013507.01.T01:intron 35.0%
ACTGTGTCTATCTCTTATGT+GGG + Chr3:39670489-39670508 MsG0380013507.01.T01:intron 35.0%
ACTTTAAGTAGGAAAGAGTC+AGG + Chr3:39666930-39666949 MsG0380013507.01.T01:intron 35.0%
AGGTAATTTAGATGGGGAAT+TGG - Chr3:39665918-39665937 None:intergenic 35.0%
ATGGTCACAAATAAGGTTGT+CGG - Chr3:39667869-39667888 None:intergenic 35.0%
ATTAAGGAGACAGTTGTCAA+AGG + Chr3:39669527-39669546 MsG0380013507.01.T01:intron 35.0%
ATTACCCTGCAGTAAAATTC+AGG + Chr3:39668226-39668245 MsG0380013507.01.T01:intron 35.0%
CAAAAACCATAGATGATGAG+AGG + Chr3:39668815-39668834 MsG0380013507.01.T01:intron 35.0%
CAAAAGGGAGCTTAAAAAGA+AGG + Chr3:39671747-39671766 MsG0380013507.01.T01:CDS 35.0%
CAAAAGTGAATCTCAAGTCA+GGG - Chr3:39671218-39671237 None:intergenic 35.0%
CCCATGATCTTCTATGAATA+AGG - Chr3:39671264-39671283 None:intergenic 35.0%
CTAATGCTAAGTTCTTGCTT+TGG + Chr3:39669799-39669818 MsG0380013507.01.T01:intron 35.0%
CTAGCCACATTGAAACAAAT+TGG + Chr3:39671920-39671939 MsG0380013507.01.T01:CDS 35.0%
CTCTTGGTTACAAAAAGAGT+GGG + Chr3:39671804-39671823 MsG0380013507.01.T01:CDS 35.0%
CTGCTCCAATATTAAAAGTG+AGG - Chr3:39671975-39671994 None:intergenic 35.0%
CTTAGTCAAGCAATTAAGCA+AGG + Chr3:39671328-39671347 MsG0380013507.01.T01:intron 35.0%
GAAAAGAAAGAAAAATGGGC+CGG - Chr3:39671140-39671159 None:intergenic 35.0%
GAATCATTTCCTATTAGGGT+TGG + Chr3:39665694-39665713 MsG0380013507.01.T01:CDS 35.0%
GATGATCTCAACACTATCTT+GGG + Chr3:39666284-39666303 MsG0380013507.01.T01:intron 35.0%
GGTCATGTTTGTCTCAAAAA+TGG + Chr3:39668957-39668976 MsG0380013507.01.T01:intron 35.0%
GTGCTCATGAAGGATATAAA+GGG + Chr3:39666306-39666325 MsG0380013507.01.T01:intron 35.0%
GTTGGTTATTATTTCATGGG+AGG + Chr3:39671584-39671603 MsG0380013507.01.T01:CDS 35.0%
TATAAAAAAGAATACGGGCC+GGG - Chr3:39670700-39670719 None:intergenic 35.0%
TCAAAAGTGAATCTCAAGTC+AGG - Chr3:39671219-39671238 None:intergenic 35.0%
TCAATGTTACCAACCCTAAT+AGG - Chr3:39665706-39665725 None:intergenic 35.0%
TCTAACAAGCATCCCATTAT+CGG - Chr3:39665747-39665766 None:intergenic 35.0%
TCTCTTGGTTACAAAAAGAG+TGG + Chr3:39671803-39671822 MsG0380013507.01.T01:CDS 35.0%
TCTTGGTTACAAAAAGAGTG+GGG + Chr3:39671805-39671824 MsG0380013507.01.T01:CDS 35.0%
TGACGTGAATTCCATTGTTT+GGG - Chr3:39667553-39667572 None:intergenic 35.0%
TGATGATATTGCACTGCTTA+TGG + Chr3:39666165-39666184 MsG0380013507.01.T01:intron 35.0%
TGTAGAAATTTGCATCTAGG+CGG + Chr3:39671542-39671561 MsG0380013507.01.T01:intron 35.0%
TTATTATTTCATGGGAGGTG+TGG + Chr3:39671589-39671608 MsG0380013507.01.T01:CDS 35.0%
TTGACGTGAATTCCATTGTT+TGG - Chr3:39667554-39667573 None:intergenic 35.0%
TTGTAAAGAGAACATAAGGG+AGG + Chr3:39671382-39671401 MsG0380013507.01.T01:intron 35.0%
TTGTTGCACTTCTGCAAAAA+TGG - Chr3:39665846-39665865 None:intergenic 35.0%
! ATGGATTGATGTTTCAAGAG+GGG + Chr3:39666361-39666380 MsG0380013507.01.T01:intron 35.0%
! ATTTAGAGTGTGTGTTGGAT+GGG + Chr3:39667087-39667106 MsG0380013507.01.T01:intron 35.0%
! CCCTTATTTGTGTATTGTCA+TGG - Chr3:39666490-39666509 None:intergenic 35.0%
! GCTAGCTTGTAAAATTGTTG+GGG + Chr3:39669986-39670005 MsG0380013507.01.T01:intron 35.0%
! GCTGATTTATAACAAGAGCT+TGG + Chr3:39668273-39668292 MsG0380013507.01.T01:intron 35.0%
! TATCGATGGGGTAATTTTGA+GGG - Chr3:39667607-39667626 None:intergenic 35.0%
! TGAGGGAATGTAATGTTTTG+AGG - Chr3:39667590-39667609 None:intergenic 35.0%
! TTTGGATTGTTGTTGTTCAC+TGG + Chr3:39669817-39669836 MsG0380013507.01.T01:intron 35.0%
! TTTTCTTTATCGTTGATCCC+TGG + Chr3:39665972-39665991 MsG0380013507.01.T01:intron 35.0%
!! AAAAGAGAAATCGGTTTGAG+GGG + Chr3:39669623-39669642 MsG0380013507.01.T01:intron 35.0%
!! AACAGTGTATATTTTGAGGG+AGG + Chr3:39671296-39671315 MsG0380013507.01.T01:intron 35.0%
!! AGAAAAGAGAAATCGGTTTG+AGG + Chr3:39669621-39669640 MsG0380013507.01.T01:intron 35.0%
!! AGAAGATGAAAGCATCGTTA+AGG + Chr3:39671946-39671965 MsG0380013507.01.T01:CDS 35.0%
!! ATGACCTTTGAGACAACTAT+TGG - Chr3:39668943-39668962 None:intergenic 35.0%
!! ATTCACTTTTGAACCTTGGT+AGG + Chr3:39671227-39671246 MsG0380013507.01.T01:intron 35.0%
!! GAAAAGAGAAATCGGTTTGA+GGG + Chr3:39669622-39669641 MsG0380013507.01.T01:intron 35.0%
!! GAAAGTGTTTAAGTGTTCAC+CGG + Chr3:39670015-39670034 MsG0380013507.01.T01:intron 35.0%
!! GAATGGATTGATGTTTCAAG+AGG + Chr3:39666359-39666378 MsG0380013507.01.T01:intron 35.0%
!! GAGGGAATGTAATGTTTTGA+GGG - Chr3:39667589-39667608 None:intergenic 35.0%
!! TGAGATTCACTTTTGAACCT+TGG + Chr3:39671223-39671242 MsG0380013507.01.T01:intron 35.0%
!!! ATGTTTTAGGGTTACCAACA+CGG + Chr3:39665636-39665655 MsG0380013507.01.T01:CDS 35.0%
!!! CGGGTTGCCATTTTTTTTAA+TGG + Chr3:39666550-39666569 MsG0380013507.01.T01:intron 35.0%
!!! CTTTGGAGGCATTTTATTGT+TGG + Chr3:39671566-39671585 MsG0380013507.01.T01:CDS 35.0%
AAACTAGCCCAAAACACACT+CGG - Chr3:39671070-39671089 None:intergenic 40.0%
ACCAAAGCGATGTATTCTCT+TGG + Chr3:39671788-39671807 MsG0380013507.01.T01:CDS 40.0%
ACCAAGAGAATACATCGCTT+TGG - Chr3:39671792-39671811 None:intergenic 40.0%
ACGAAGTTGTTGGCACAAAA+GGG + Chr3:39671732-39671751 MsG0380013507.01.T01:CDS 40.0%
ATAATCGATGTGACTCATCC+AGG - Chr3:39665993-39666012 None:intergenic 40.0%
ATTTGTCAGTACCGCTGAAA+GGG + Chr3:39672426-39672445 MsG0380013507.01.T01:CDS 40.0%
CAATGAAAGATAGGGGAGAA+AGG + Chr3:39668174-39668193 MsG0380013507.01.T01:intron 40.0%
CATACCTTTGAATTCGTCTG+CGG + Chr3:39671850-39671869 MsG0380013507.01.T01:CDS 40.0%
CTGTGTCTATCTCTTATGTG+GGG + Chr3:39670490-39670509 MsG0380013507.01.T01:intron 40.0%
CTGTTTATGCAGCAAGTACT+TGG + Chr3:39671878-39671897 MsG0380013507.01.T01:CDS 40.0%
CTTTCTCCCCTATCTTTCAT+TGG - Chr3:39668176-39668195 None:intergenic 40.0%
GGATGATCTCAACACTATCT+TGG + Chr3:39666283-39666302 MsG0380013507.01.T01:intron 40.0%
GGTGCTCATGAAGGATATAA+AGG + Chr3:39666305-39666324 MsG0380013507.01.T01:intron 40.0%
GTTGTTGTCATATGACTGGA+AGG + Chr3:39666406-39666425 MsG0380013507.01.T01:intron 40.0%
TAAAGAGAACATAAGGGAGG+TGG + Chr3:39671385-39671404 MsG0380013507.01.T01:intron 40.0%
TAATCGATGTGACTCATCCA+GGG - Chr3:39665992-39666011 None:intergenic 40.0%
TACTCTCCTCTCATCATCTA+TGG - Chr3:39668824-39668843 None:intergenic 40.0%
TATTCCATGGTTCTTGCGAA+GGG + Chr3:39668128-39668147 MsG0380013507.01.T01:intron 40.0%
TCAACGATAAAGAAAACCCC+AGG - Chr3:39665968-39665987 None:intergenic 40.0%
TCAGGTATCATTACAGTCGA+GGG - Chr3:39672208-39672227 None:intergenic 40.0%
TCGAAGGGGTCTTAAATTGA+CGG - Chr3:39668509-39668528 None:intergenic 40.0%
TCGACCAATAGTTGTCTCAA+AGG + Chr3:39668936-39668955 MsG0380013507.01.T01:intron 40.0%
TCGTCATGTTCAGATGACTT+TGG + Chr3:39672313-39672332 MsG0380013507.01.T01:CDS 40.0%
TCTATCTCTTATGTGGGGTT+GGG + Chr3:39670495-39670514 MsG0380013507.01.T01:intron 40.0%
TGAGCTTATTGATGGGGATA+AGG + Chr3:39672003-39672022 MsG0380013507.01.T01:CDS 40.0%
TGCAATATCATCAAGACTCC+AGG - Chr3:39666158-39666177 None:intergenic 40.0%
TTCAGGTATCATTACAGTCG+AGG - Chr3:39672209-39672228 None:intergenic 40.0%
TTGTGCCACAAAATGCAACA+CGG - Chr3:39670119-39670138 None:intergenic 40.0%
TTTACCGCAGACGAATTCAA+AGG - Chr3:39671857-39671876 None:intergenic 40.0%
TTTATGCAGCAAGTACTTGG+CGG + Chr3:39671881-39671900 MsG0380013507.01.T01:CDS 40.0%
! AAAAAAGCCCGAGTGTGTTT+TGG + Chr3:39671059-39671078 MsG0380013507.01.T01:intron 40.0%
! AAAAAGCCCGAGTGTGTTTT+GGG + Chr3:39671060-39671079 MsG0380013507.01.T01:intron 40.0%
! AAAAATATGGGCTTTTGGGC+CGG + Chr3:39671105-39671124 MsG0380013507.01.T01:intron 40.0%
! AAAATGCTGAACCGACTTAC+CGG - Chr3:39669716-39669735 None:intergenic 40.0%
! CATTTAGAGTGTGTGTTGGA+TGG + Chr3:39667086-39667105 MsG0380013507.01.T01:intron 40.0%
! CCAGCAGTCACTCTTTTATT+GGG + Chr3:39669341-39669360 MsG0380013507.01.T01:intron 40.0%
! CGCTAGTCTATATAGACTCA+TGG - Chr3:39667841-39667860 None:intergenic 40.0%
! CTATCGATGGGGTAATTTTG+AGG - Chr3:39667608-39667627 None:intergenic 40.0%
! GGCCAAAAATATGGGCTTTT+GGG + Chr3:39671101-39671120 MsG0380013507.01.T01:intron 40.0%
! TATGCTATTTGCACAAGCCT+GGG + Chr3:39665948-39665967 MsG0380013507.01.T01:intron 40.0%
! TCCAGCAGTCACTCTTTTAT+TGG + Chr3:39669340-39669359 MsG0380013507.01.T01:intron 40.0%
! TTATGCTATTTGCACAAGCC+TGG + Chr3:39665947-39665966 MsG0380013507.01.T01:intron 40.0%
! TTTAGAGTGTGTGTTGGATG+GGG + Chr3:39667088-39667107 MsG0380013507.01.T01:intron 40.0%
!! AACTTGTCCAGAGCTGATTT+TGG + Chr3:39672400-39672419 MsG0380013507.01.T01:CDS 40.0%
!! GGCTGCCTCACTTTTAATAT+TGG + Chr3:39671967-39671986 MsG0380013507.01.T01:CDS 40.0%
!! GGTTTATGCCTTTAGGGTAT+TGG + Chr3:39669861-39669880 MsG0380013507.01.T01:intron 40.0%
!! GTGTCATTTAGAGTGTGTGT+TGG + Chr3:39667082-39667101 MsG0380013507.01.T01:intron 40.0%
!! TCGAGGCATTGAATACATTG+AGG + Chr3:39672029-39672048 MsG0380013507.01.T01:CDS 40.0%
!!! CAAAAGCCCATATTTTTGGC+CGG - Chr3:39671102-39671121 None:intergenic 40.0%
!!! GTGTGTTTTGGGCTAGTTTT+AGG + Chr3:39671071-39671090 MsG0380013507.01.T01:intron 40.0%
AAATCGGTTGAAACTGCTGG+AGG + Chr3:39672165-39672184 MsG0380013507.01.T01:CDS 45.0%
AACTAGCCCAAAACACACTC+GGG - Chr3:39671069-39671088 None:intergenic 45.0%
AAGGTCACGAGTTCAAGTCT+TGG + Chr3:39666425-39666444 MsG0380013507.01.T01:intron 45.0%
ACTATCTTGGGTGCTCATGA+AGG + Chr3:39666296-39666315 MsG0380013507.01.T01:intron 45.0%
AGAGCGAGCCAATGAAAGAT+AGG + Chr3:39668165-39668184 MsG0380013507.01.T01:intron 45.0%
AGCGAGCCAATGAAAGATAG+GGG + Chr3:39668167-39668186 MsG0380013507.01.T01:intron 45.0%
AGGCTCAACAAGTGTCTTGA+TGG + Chr3:39671682-39671701 MsG0380013507.01.T01:CDS 45.0%
AGGGGTCTTAAATTGACGGT+CGG - Chr3:39668505-39668524 None:intergenic 45.0%
ATACAAAAATTGGGCCGGGT+CGG - Chr3:39671035-39671054 None:intergenic 45.0%
ATTTGCATCTAGGCGGTCTT+TGG + Chr3:39671549-39671568 MsG0380013507.01.T01:CDS 45.0%
CAGGTATCATTACAGTCGAG+GGG - Chr3:39672207-39672226 None:intergenic 45.0%
CCCAATAAAAGAGTGACTGC+TGG - Chr3:39669344-39669363 None:intergenic 45.0%
CTATCTCTTATGTGGGGTTG+GGG + Chr3:39670496-39670515 MsG0380013507.01.T01:intron 45.0%
CTCACCTTTAACGGCGATAA+CGG + Chr3:39668316-39668335 MsG0380013507.01.T01:intron 45.0%
GACGAAGTTGTTGGCACAAA+AGG + Chr3:39671731-39671750 MsG0380013507.01.T01:CDS 45.0%
GACTAGAGCTGTCAAATGGA+CGG + Chr3:39670541-39670560 MsG0380013507.01.T01:intron 45.0%
GAGCGAGCCAATGAAAGATA+GGG + Chr3:39668166-39668185 MsG0380013507.01.T01:intron 45.0%
GATTTGTCAGTACCGCTGAA+AGG + Chr3:39672425-39672444 MsG0380013507.01.T01:CDS 45.0%
GGTAGCATATCTTCCTACCA+AGG - Chr3:39671243-39671262 None:intergenic 45.0%
GTATTCCATGGTTCTTGCGA+AGG + Chr3:39668127-39668146 MsG0380013507.01.T01:intron 45.0%
GTCTATCTCTTATGTGGGGT+GGG + Chr3:39670494-39670513 MsG0380013507.01.T01:intron 45.0%
GTCTATCTCTTATGTGGGGT+TGG + Chr3:39670494-39670513 MsG0380013507.01.T01:intron 45.0%
TAGTCCGTTATCGCCGTTAA+AGG - Chr3:39668323-39668342 None:intergenic 45.0%
TATCTCTTATGTGGGGTTGG+GGG + Chr3:39670497-39670516 MsG0380013507.01.T01:intron 45.0%
TATGCCCACCTCACCTTTAA+CGG + Chr3:39668307-39668326 MsG0380013507.01.T01:intron 45.0%
TCTATCTCTTATGTGGGGTG+GGG + Chr3:39671168-39671187 MsG0380013507.01.T01:intron 45.0%
TCTTCTATGGAGCACGTTGT+AGG + Chr3:39671662-39671681 MsG0380013507.01.T01:CDS 45.0%
TGAGCTGGAAAATTTGAGCC+CGG + Chr3:39670637-39670656 MsG0380013507.01.T01:intron 45.0%
TGCCCATACAAAAATTGGGC+CGG - Chr3:39671040-39671059 None:intergenic 45.0%
TGTCTATCTCTTATGTGGGG+TGG + Chr3:39670493-39670512 MsG0380013507.01.T01:intron 45.0%
TTAAAGGTGAGGTGGGCATA+GGG - Chr3:39668307-39668326 None:intergenic 45.0%
TTCTTGCTTCTCCGGTAAGT+CGG + Chr3:39669702-39669721 MsG0380013507.01.T01:intron 45.0%
TTGTTGGGCGACATTCTTCT+GGG - Chr3:39669497-39669516 None:intergenic 45.0%
TTTCCAGCTCATGCATCAAC+CGG - Chr3:39670628-39670647 None:intergenic 45.0%
TTTGTTGGGCGACATTCTTC+TGG - Chr3:39669498-39669517 None:intergenic 45.0%
! AAAAGCGATCTGAAGTTCGC+CGG - Chr3:39669684-39669703 None:intergenic 45.0%
! AAAATATGGGCTTTTGGGCC+GGG + Chr3:39671106-39671125 MsG0380013507.01.T01:intron 45.0%
! ACACAAAGCATCTGTGTCAG+TGG - Chr3:39670332-39670351 None:intergenic 45.0%
! ACCCGGCCCAATTTTTGTAT+GGG + Chr3:39671035-39671054 MsG0380013507.01.T01:intron 45.0%
! ATGCTATTTGCACAAGCCTG+GGG + Chr3:39665949-39665968 MsG0380013507.01.T01:intron 45.0%
! CCATTTGACAGCTCTAGTCA+GGG - Chr3:39670540-39670559 None:intergenic 45.0%
! CGGCCAAAAATATGGGCTTT+TGG + Chr3:39671100-39671119 MsG0380013507.01.T01:intron 45.0%
! CTGTTCCGTGTTGCATTTTG+TGG + Chr3:39670111-39670130 MsG0380013507.01.T01:intron 45.0%
! GATGCTTGTTAGATCACCAC+AGG + Chr3:39665754-39665773 MsG0380013507.01.T01:CDS 45.0%
! GGCCCAAAAGCCCATATTTT+TGG - Chr3:39671106-39671125 None:intergenic 45.0%
! TCCATTTGACAGCTCTAGTC+AGG - Chr3:39670541-39670560 None:intergenic 45.0%
! TTCCGGGCGAGATTTTGTAA+GGG + Chr3:39672138-39672157 MsG0380013507.01.T01:CDS 45.0%
!! ATCTTTCATTGGCTCGCTCT+TGG - Chr3:39668165-39668184 None:intergenic 45.0%
!! GATCGCTTTTCTTGCTTCTC+CGG + Chr3:39669694-39669713 MsG0380013507.01.T01:intron 45.0%
!! TGTTTCAAGAGGGGTATCCT+TGG + Chr3:39666370-39666389 MsG0380013507.01.T01:intron 45.0%
!!! TTTTGGGCTAGTTTTAGGCC+CGG + Chr3:39671076-39671095 MsG0380013507.01.T01:intron 45.0%
AAAGAGTGGGGAACACCTAG+AGG + Chr3:39671817-39671836 MsG0380013507.01.T01:CDS 50.0%
AACAACTTCGTCGTCCCCTT+CGG - Chr3:39671723-39671742 None:intergenic 50.0%
AAGCTACTCGTTCCATGGTG+AGG - Chr3:39672261-39672280 None:intergenic 50.0%
ACAAATAAGGGGACCCCTTC+CGG + Chr3:39666499-39666518 MsG0380013507.01.T01:intron 50.0%
AGAAAAATGGGCCGGGCTAA+CGG - Chr3:39671132-39671151 None:intergenic 50.0%
AGCAAGTACTTGGCGGTGAT+TGG + Chr3:39671888-39671907 MsG0380013507.01.T01:CDS 50.0%
AGCTACTCGTTCCATGGTGA+GGG - Chr3:39672260-39672279 None:intergenic 50.0%
AGTTGAACAAGCCCTCACCA+TGG + Chr3:39672246-39672265 MsG0380013507.01.T01:CDS 50.0%
ATCGCCGTTAAAGGTGAGGT+GGG - Chr3:39668314-39668333 None:intergenic 50.0%
ATCTCTTATGTGGGGTTGGG+GGG + Chr3:39670498-39670517 MsG0380013507.01.T01:intron 50.0%
ATCTGTGTCAGTGGCAACAG+AGG - Chr3:39670323-39670342 None:intergenic 50.0%
CAACACGGAAGAGCTTGACA+TGG + Chr3:39665651-39665670 MsG0380013507.01.T01:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr3:39666390-39666409 None:intergenic 50.0%
CAAGGAAGCTACTCGTTCCA+TGG - Chr3:39672266-39672285 None:intergenic 50.0%
CATGTCAAGCTCTTCCGTGT+TGG - Chr3:39665653-39665672 None:intergenic 50.0%
CCATATCACCGATCGCTCAT+CGG + Chr3:39669655-39669674 MsG0380013507.01.T01:intron 50.0%
CCCTGACTAGAGCTGTCAAA+TGG + Chr3:39670537-39670556 MsG0380013507.01.T01:intron 50.0%
CGTTATCGCCGTTAAAGGTG+AGG - Chr3:39668318-39668337 None:intergenic 50.0%
CTATCTCTTATGTGGGGTGG+GGG + Chr3:39671169-39671188 MsG0380013507.01.T01:intron 50.0%
GCAAGTACTTGGCGGTGATT+GGG + Chr3:39671889-39671908 MsG0380013507.01.T01:CDS 50.0%
GCCCATACAAAAATTGGGCC+GGG - Chr3:39671039-39671058 None:intergenic 50.0%
GTTAAAGGTGAGGTGGGCAT+AGG - Chr3:39668308-39668327 None:intergenic 50.0%
TACAAAAATTGGGCCGGGTC+GGG - Chr3:39671034-39671053 None:intergenic 50.0%
TAGATCACCACAGGTTGTGC+AGG + Chr3:39665763-39665782 MsG0380013507.01.T01:CDS 50.0%
TATCGCCGTTAAAGGTGAGG+TGG - Chr3:39668315-39668334 None:intergenic 50.0%
TATCTCTTATGTGGGGTGGG+GGG + Chr3:39671170-39671189 MsG0380013507.01.T01:intron 50.0%
TGAGTTTCCTGCACAACCTG+TGG - Chr3:39665773-39665792 None:intergenic 50.0%
TGATGGGGATAAGGTCATCG+AGG + Chr3:39672012-39672031 MsG0380013507.01.T01:CDS 50.0%
TGCCCTTACAAAATCTCGCC+CGG - Chr3:39672143-39672162 None:intergenic 50.0%
TTCCAGCTCATGCATCAACC+GGG - Chr3:39670627-39670646 None:intergenic 50.0%
TTCTCCCTTCGCAAGAACCA+TGG - Chr3:39668135-39668154 None:intergenic 50.0%
TTGGGCCAGTGCGTATAACT+GGG + Chr3:39670588-39670607 MsG0380013507.01.T01:intron 50.0%
! AGTTATACGCACTGGCCCAA+CGG - Chr3:39670588-39670607 None:intergenic 50.0%
! CTTCCGGGCGAGATTTTGTA+AGG + Chr3:39672137-39672156 MsG0380013507.01.T01:CDS 50.0%
! GACCCGGCCCAATTTTTGTA+TGG + Chr3:39671034-39671053 MsG0380013507.01.T01:intron 50.0%
! TAGCTTGTCCACCCTTTCAG+CGG - Chr3:39672440-39672459 None:intergenic 50.0%
! TATGGGGAGCTTTAGTGCAC+CGG + Chr3:39666530-39666549 MsG0380013507.01.T01:intron 50.0%
AAAAAGAATACGGGCCGGGC+TGG - Chr3:39670696-39670715 None:intergenic 55.0%
ACCGATCGCTCATCGGATTC+CGG + Chr3:39669662-39669681 MsG0380013507.01.T01:intron 55.0%
ATCCAACGCGTTGCGACACA+AGG - Chr3:39672284-39672303 None:intergenic 55.0%
ATCTCTTATGTGGGGTGGGG+GGG + Chr3:39671171-39671190 MsG0380013507.01.T01:intron 55.0%
CCGATGAGCGATCGGTGATA+TGG - Chr3:39669658-39669677 None:intergenic 55.0%
GAACACCTAGAGGAGGAGTC+TGG + Chr3:39671827-39671846 MsG0380013507.01.T01:CDS 55.0%
GAAGAACCACCTTGGCCAGA+GGG - Chr3:39672121-39672140 None:intergenic 55.0%
GAAGGGGACGACGAAGTTGT+TGG + Chr3:39671722-39671741 MsG0380013507.01.T01:CDS 55.0%
GAGGAGGAGGGGTTCGAAAT+AGG - Chr3:39672510-39672529 None:intergenic 55.0%
GTATGCCAGACTCCTCCTCT+AGG - Chr3:39671835-39671854 None:intergenic 55.0%
GTTGGGCCAGTGCGTATAAC+TGG + Chr3:39670587-39670606 MsG0380013507.01.T01:intron 55.0%
TCCTGCTTCATGTCACCCTC+TGG + Chr3:39672103-39672122 MsG0380013507.01.T01:CDS 55.0%
TCTCTTATGTGGGGTTGGGG+GGG + Chr3:39670499-39670518 MsG0380013507.01.T01:intron 55.0%
TCTGGCCAAGGTGGTTCTTC+CGG + Chr3:39672121-39672140 MsG0380013507.01.T01:CDS 55.0%
TGCATCTAGGCGGTCTTTGG+AGG + Chr3:39671552-39671571 MsG0380013507.01.T01:CDS 55.0%
TGGAAAATTTGAGCCCGGCC+CGG + Chr3:39670642-39670661 MsG0380013507.01.T01:intron 55.0%
TGTCAGTACCGCTGAAAGGG+TGG + Chr3:39672429-39672448 MsG0380013507.01.T01:CDS 55.0%
TTCATGTCACCCTCTGGCCA+AGG + Chr3:39672109-39672128 MsG0380013507.01.T01:CDS 55.0%
TTCCTTGTGTCGCAACGCGT+TGG + Chr3:39672279-39672298 MsG0380013507.01.T01:CDS 55.0%
TTGGGCGACATTCTTCTGGG+AGG - Chr3:39669494-39669513 None:intergenic 55.0%
! ATGGGGAGCTTTAGTGCACC+GGG + Chr3:39666531-39666550 MsG0380013507.01.T01:intron 55.0%
! GCGACATTCTTCTGGGAGGA+AGG - Chr3:39669490-39669509 None:intergenic 55.0%
!!! AGCCCATATTTTTGGCCGGC+CGG - Chr3:39671098-39671117 None:intergenic 55.0%
AGCTCATGCATCAACCGGGC+CGG - Chr3:39670623-39670642 None:intergenic 60.0%
AGCTCCCCATACGCAGTGTC+CGG - Chr3:39666521-39666540 None:intergenic 60.0%
ATGTCACCCTCTGGCCAAGG+TGG + Chr3:39672112-39672131 MsG0380013507.01.T01:CDS 60.0%
CCATACGCAGTGTCCGGAAG+GGG - Chr3:39666515-39666534 None:intergenic 60.0%
CCCATACGCAGTGTCCGGAA+GGG - Chr3:39666516-39666535 None:intergenic 60.0%
CCCTTCCGGACACTGCGTAT+GGG + Chr3:39666513-39666532 MsG0380013507.01.T01:intron 60.0%
CCTTCCGGACACTGCGTATG+GGG + Chr3:39666514-39666533 MsG0380013507.01.T01:intron 60.0%
CTCTTATGTGGGGTTGGGGG+GGG + Chr3:39670500-39670519 MsG0380013507.01.T01:intron 60.0%
CTGGCCAAGGTGGTTCTTCC+GGG + Chr3:39672122-39672141 MsG0380013507.01.T01:CDS 60.0%
GAGCTGTCAAATGGACGGCC+CGG + Chr3:39670546-39670565 MsG0380013507.01.T01:intron 60.0%
GAGTGGGGAACACCTAGAGG+AGG + Chr3:39671820-39671839 MsG0380013507.01.T01:CDS 60.0%
GCCAGAGGGTGACATGAAGC+AGG - Chr3:39672107-39672126 None:intergenic 60.0%
GCCAGCCCAGTTATACGCAC+TGG - Chr3:39670596-39670615 None:intergenic 60.0%
GCCAGTGCGTATAACTGGGC+TGG + Chr3:39670592-39670611 MsG0380013507.01.T01:intron 60.0%
GCCCGGCCGGCCAAAAATAT+GGG + Chr3:39671093-39671112 MsG0380013507.01.T01:intron 60.0%
GCCGGAATCCGATGAGCGAT+CGG - Chr3:39669666-39669685 None:intergenic 60.0%
GGAAGAACCACCTTGGCCAG+AGG - Chr3:39672122-39672141 None:intergenic 60.0%
GTCGTCCCCTTCGGCTGATA+GGG - Chr3:39671714-39671733 None:intergenic 60.0%
TCGTCCCCTTCGGCTGATAG+GGG - Chr3:39671713-39671732 None:intergenic 60.0%
TCTCTTATGTGGGGTGGGGG+GGG + Chr3:39671172-39671191 MsG0380013507.01.T01:intron 60.0%
TCTTATGTGGGGTTGGGGGG+GGG + Chr3:39670501-39670520 MsG0380013507.01.T01:intron 60.0%
TTCCGCCCCTATCAGCCGAA+GGG + Chr3:39671705-39671724 MsG0380013507.01.T01:CDS 60.0%
!! AGGGGTATCCTTGGCGCAAC+TGG + Chr3:39666379-39666398 MsG0380013507.01.T01:intron 60.0%
!! TATAACTGGGCTGGCCAGCC+CGG + Chr3:39670601-39670620 MsG0380013507.01.T01:intron 60.0%
!!! GCCCATATTTTTGGCCGGCC+GGG - Chr3:39671097-39671116 None:intergenic 60.0%
AAAATTGGGCCGGGTCGGGC+TGG - Chr3:39671030-39671049 None:intergenic 65.0%
ACATGGGCCAACGGCCCGAT+GGG + Chr3:39670670-39670689 MsG0380013507.01.T01:intron 65.0%
CCCCATACGCAGTGTCCGGA+AGG - Chr3:39666517-39666536 None:intergenic 65.0%
CCCCTTCCGGACACTGCGTA+TGG + Chr3:39666512-39666531 MsG0380013507.01.T01:intron 65.0%
CCGGCCCTTACATGGGCCAA+CGG + Chr3:39670661-39670680 MsG0380013507.01.T01:intron 65.0%
CCGTTGGCCCATGTAAGGGC+CGG - Chr3:39670664-39670683 None:intergenic 65.0%
CGGGCCGTTGGCCCATGTAA+GGG - Chr3:39670668-39670687 None:intergenic 65.0%
CGTCGTCCCCTTCGGCTGAT+AGG - Chr3:39671715-39671734 None:intergenic 65.0%
CGTTGGCCCATGTAAGGGCC+GGG - Chr3:39670663-39670682 None:intergenic 65.0%
CTCGCCCGGAAGAACCACCT+TGG - Chr3:39672129-39672148 None:intergenic 65.0%
CTCTTATGTGGGGTGGGGGG+GGG + Chr3:39671173-39671192 MsG0380013507.01.T01:intron 65.0%
CTTATGTGGGGTTGGGGGGG+GGG + Chr3:39670502-39670521 MsG0380013507.01.T01:intron 65.0%
GCTCATGCATCAACCGGGCC+GGG - Chr3:39670622-39670641 None:intergenic 65.0%
GGCCCGGCCGGCCAAAAATA+TGG + Chr3:39671092-39671111 MsG0380013507.01.T01:intron 65.0%
GTCAAATGGACGGCCCGGCT+CGG + Chr3:39670551-39670570 MsG0380013507.01.T01:intron 65.0%
GTTCCGCCCCTATCAGCCGA+AGG + Chr3:39671704-39671723 MsG0380013507.01.T01:CDS 65.0%
TACATGGGCCAACGGCCCGA+TGG + Chr3:39670669-39670688 MsG0380013507.01.T01:intron 65.0%
TCCCCTTCGGCTGATAGGGG+CGG - Chr3:39671710-39671729 None:intergenic 65.0%
TCCGCCCCTATCAGCCGAAG+GGG + Chr3:39671706-39671725 MsG0380013507.01.T01:CDS 65.0%
TCGGGCCGTTGGCCCATGTA+AGG - Chr3:39670669-39670688 None:intergenic 65.0%
TCTTATGTGGGGTGGGGGGG+GGG + Chr3:39671174-39671193 MsG0380013507.01.T01:intron 65.0%
TTATGTGGGGTTGGGGGGGG+GGG + Chr3:39670503-39670522 MsG0380013507.01.T01:intron 65.0%
! GGCCCGGTTGATGCATGAGC+TGG + Chr3:39670622-39670641 MsG0380013507.01.T01:intron 65.0%
!! TCGGGCTGGCCATCGGCTTT+GGG - Chr3:39671016-39671035 None:intergenic 65.0%
!!! GGGCTAGTTTTAGGCCCGGC+CGG + Chr3:39671080-39671099 MsG0380013507.01.T01:intron 65.0%
AATGGGCCGGGCTAACGGCC+CGG - Chr3:39671127-39671146 None:intergenic 70.0%
ATGCATCAACCGGGCCGGGC+TGG - Chr3:39670618-39670637 None:intergenic 70.0%
ATGGGCCGGCCCAAAGCCGA+TGG + Chr3:39671004-39671023 MsG0380013507.01.T01:intron 70.0%
CTTATGTGGGGTGGGGGGGG+GGG + Chr3:39671175-39671194 MsG0380013507.01.T01:intron 70.0%
TATGTGGGGTTGGGGGGGGG+GGG + Chr3:39670504-39670523 MsG0380013507.01.T01:intron 70.0%
TTATGTGGGGTGGGGGGGGG+GGG + Chr3:39671176-39671195 MsG0380013507.01.T01:intron 70.0%
TTTGGGCCGGGCCGTTAGCC+CGG + Chr3:39671118-39671137 MsG0380013507.01.T01:intron 70.0%
! ACGCACTGGCCCAACGGCCT+GGG - Chr3:39670582-39670601 None:intergenic 70.0%
! TACGCACTGGCCCAACGGCC+TGG - Chr3:39670583-39670602 None:intergenic 70.0%
!! GCTGGCCATCGGCTTTGGGC+CGG - Chr3:39671012-39671031 None:intergenic 70.0%
!! GTCGGGCTGGCCATCGGCTT+TGG - Chr3:39671017-39671036 None:intergenic 70.0%
AACGGCCCGATGGGCCAGCC+CGG + Chr3:39670679-39670698 MsG0380013507.01.T01:intron 75.0%
ACTGGCCCAACGGCCTGGGC+CGG - Chr3:39670578-39670597 None:intergenic 75.0%
AGCCCGGCCCGGCCCTTACA+TGG + Chr3:39670653-39670672 MsG0380013507.01.T01:intron 75.0%
AGCCGATGGCCAGCCCGACC+CGG + Chr3:39671018-39671037 MsG0380013507.01.T01:intron 75.0%
ATGTGGGGTTGGGGGGGGGG+GGG + Chr3:39670505-39670524 MsG0380013507.01.T01:intron 75.0%
GCCCATGTAAGGGCCGGGCC+GGG - Chr3:39670658-39670677 None:intergenic 75.0%
GCCCGGCCCGGCCCTTACAT+GGG + Chr3:39670654-39670673 MsG0380013507.01.T01:intron 75.0%
GGCCCATGTAAGGGCCGGGC+CGG - Chr3:39670659-39670678 None:intergenic 75.0%
TATGTGGGGTGGGGGGGGGG+GGG + Chr3:39671177-39671196 MsG0380013507.01.T01:intron 75.0%
!! TACGGGCCGGGCTGGCCCAT+CGG - Chr3:39670688-39670707 None:intergenic 75.0%
! ATGTGGGGTGGGGGGGGGGG+GGG + Chr3:39671178-39671197 MsG0380013507.01.T01:intron 80.0%
! CTGGCCCAACGGCCTGGGCC+GGG - Chr3:39670577-39670596 None:intergenic 80.0%
! TCGGCCCGGCCCAGGCCGTT+GGG + Chr3:39670570-39670589 MsG0380013507.01.T01:intron 80.0%
! TGTGGGGTTGGGGGGGGGGG+GGG + Chr3:39670506-39670525 MsG0380013507.01.T01:intron 80.0%
!!! ACGGGCCGGGCTGGCCCATC+GGG - Chr3:39670687-39670706 None:intergenic 80.0%
!!! ATGGACGGCCCGGCTCGGCC+CGG + Chr3:39670556-39670575 MsG0380013507.01.T01:intron 80.0%
!!! GGCCGGGTCGGGCTGGCCAT+CGG - Chr3:39671023-39671042 None:intergenic 80.0%
!!! GGGCTGGCCCATCGGGCCGT+TGG - Chr3:39670680-39670699 None:intergenic 80.0%
! CTCGGCCCGGCCCAGGCCGT+TGG + Chr3:39670569-39670588 MsG0380013507.01.T01:intron 85.0%
! GTGGGGTTGGGGGGGGGGGG+GGG + Chr3:39670507-39670526 MsG0380013507.01.T01:intron 85.0%
! TGGGGTTGGGGGGGGGGGGG+GGG + Chr3:39670508-39670527 MsG0380013507.01.T01:intron 85.0%
! TGTGGGGTGGGGGGGGGGGG+GGG + Chr3:39671179-39671198 MsG0380013507.01.T01:intron 85.0%
!!! CTGGGCTGGCCAGCCCGGCC+CGG + Chr3:39670606-39670625 MsG0380013507.01.T01:intron 85.0%
! CGGCCTGGGCCGGGCCGAGC+CGG - Chr3:39670568-39670587 None:intergenic 90.0%
! GGCCTGGGCCGGGCCGAGCC+GGG - Chr3:39670567-39670586 None:intergenic 90.0%
! GGGGTTGGGGGGGGGGGGGG+GGG + Chr3:39670509-39670528 MsG0380013507.01.T01:intron 90.0%
! GGGTTGGGGGGGGGGGGGGG+GGG + Chr3:39670510-39670529 MsG0380013507.01.T01:intron 90.0%
! GGTTGGGGGGGGGGGGGGGG+GGG + Chr3:39670511-39670530 MsG0380013507.01.T01:intron 90.0%
! GTGGGGTGGGGGGGGGGGGG+GGG + Chr3:39671180-39671199 MsG0380013507.01.T01:intron 90.0%
! TGGGGTGGGGGGGGGGGGGG+GGG + Chr3:39671181-39671200 MsG0380013507.01.T01:intron 90.0%
! GGGGTGGGGGGGGGGGGGGG+GGG + Chr3:39671182-39671201 MsG0380013507.01.T01:intron 95.0%
! GGGTGGGGGGGGGGGGGGGG+GGG + Chr3:39671183-39671202 MsG0380013507.01.T01:intron 95.0%
! GGTGGGGGGGGGGGGGGGGG+GGG + Chr3:39671184-39671203 MsG0380013507.01.T01:intron 95.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + Chr3:39671185-39671204 MsG0380013507.01.T01:intron 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + Chr3:39670514-39670533 MsG0380013507.01.T01:intron 95.0%
!!! GGCCCGGCTCGGCCCGGCCC+AGG + Chr3:39670562-39670581 MsG0380013507.01.T01:intron 95.0%
Chromosome Type Strat End Strand Name
Chr3 gene 39665596 39672534 39665596 ID=MsG0380013507.01;Name=MsG0380013507.01
Chr3 mRNA 39665596 39672534 39665596 ID=MsG0380013507.01.T01;Parent=MsG0380013507.01;Name=MsG0380013507.01.T01;_AED=0.54;_eAED=0.56;_QI=0|0|0|0.5|0|0.5|2|0|445
Chr3 exon 39665596 39665945 39665596 ID=MsG0380013507.01.T01:exon:14441;Parent=MsG0380013507.01.T01
Chr3 exon 39671547 39672534 39671547 ID=MsG0380013507.01.T01:exon:14442;Parent=MsG0380013507.01.T01
Chr3 CDS 39665596 39665945 39665596 ID=MsG0380013507.01.T01:cds;Parent=MsG0380013507.01.T01
Chr3 CDS 39671547 39672534 39671547 ID=MsG0380013507.01.T01:cds;Parent=MsG0380013507.01.T01
Gene Sequence

>MsG0380013507.01.T01

ATGGCTAACAAAGATGGTAATAACTATAATAGGGAATCTCATGTTTTAGGGTTACCAACACGGAAGAGCTTGACATGGAATTTAATCAACTTAATATGGAATCATTTCCTATTAGGGTTGGTAACATTGAAATTTTTTAATGAAGAAGCCGATAATGGGATGCTTGTTAGATCACCACAGGTTGTGCAGGAAACTCAAATGCATATTAATGTTGATCTAGTTTTTGAAAATGTTGATGATATTAATTCCATTTTTGCAGAAGTGCAACAAGATATGAAAATCTTAGATGAAGATTATATATTGGAATATAAGGGTATTTCCAATTCCCCATCTAAATTACCTTTCAAAAGAAATTTGCATCTAGGCGGTCTTTGGAGGCATTTTATTGTTGGTTATTATTTCATGGGAGGTGTGGAAGATGAAGAACCAGCTTTGAAAAGAACAAAATTGTCACCTAATAGTTCATCTTCTATGGAGCACGTTGTAGGCTCAACAAGTGTCTTGATGGTTCCGCCCCTATCAGCCGAAGGGGACGACGAAGTTGTTGGCACAAAAGGGAGCTTAAAAAGAAGGGAGTTTGTAAGGATGATCACCAAAGCGATGTATTCTCTTGGTTACAAAAAGAGTGGGGAACACCTAGAGGAGGAGTCTGGCATACCTTTGAATTCGTCTGCGGTAAATCTGTTTATGCAGCAAGTACTTGGCGGTGATTGGGATGAAAGTCTAGCCACATTGAAACAAATTGGTATAGAAGATGAAAGCATCGTTAAGGCTGCCTCACTTTTAATATTGGAGCAGAAATTTTTTGAGCTTATTGATGGGGATAAGGTCATCGAGGCATTGAATACATTGAGGAATCAGATAACACAACTTTGTGTTGATAGTACTAGAATTCGTGAACTTTCGTCCTGCTTCATGTCACCCTCTGGCCAAGGTGGTTCTTCCGGGCGAGATTTTGTAAGGGCAAAAAATCGGTTGAAACTGCTGGAGGAGCTACAAAAACTGTTCCCCTCGACTGTAATGATACCTGAAAAGAGATTAGAACATCTAGTTGAACAAGCCCTCACCATGGAACGAGTAGCTTCCTTGTGTCGCAACGCGTTGGATAAGAAGATGTCGTCATGTTCAGATGACTTTGGACAAACTCAGATACCTACTAATCAAGCTTATACTTCTGTTGTTTCTGATGATAACGAATCGGTTAACTTGTCCAGAGCTGATTTTGGAAGATTTGTCAGTACCGCTGAAAGGGTGGACAAGCTAGAAGAAAAATACAAAATGTTATTGAGCATGCTTTCTGAACTCATAAGCCTATTTCGAACCCCTCCTCCTCAATAG

Protein sequence

>MsG0380013507.01.T01

MANKDGNNYNRESHVLGLPTRKSLTWNLINLIWNHFLLGLVTLKFFNEEADNGMLVRSPQVVQETQMHINVDLVFENVDDINSIFAEVQQDMKILDEDYILEYKGISNSPSKLPFKRNLHLGGLWRHFIVGYYFMGGVEDEEPALKRTKLSPNSSSSMEHVVGSTSVLMVPPLSAEGDDEVVGTKGSLKRREFVRMITKAMYSLGYKKSGEHLEEESGIPLNSSAVNLFMQQVLGGDWDESLATLKQIGIEDESIVKAASLLILEQKFFELIDGDKVIEALNTLRNQITQLCVDSTRIRELSSCFMSPSGQGGSSGRDFVRAKNRLKLLEELQKLFPSTVMIPEKRLEHLVEQALTMERVASLCRNALDKKMSSCSDDFGQTQIPTNQAYTSVVSDDNESVNLSRADFGRFVSTAERVDKLEEKYKMLLSMLSELISLFRTPPPQ*