AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047116.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047116.01.T01 MTR_4g121550 86.239 327 18 3 1 300 1 327 0.0 556
MsG0880047116.01.T01 MTR_2g093790 58.951 324 56 7 1 297 1 274 9.27e-120 345
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047116.01.T01 AT1G03360 56.575 327 107 5 1 299 3 322 6.80e-128 367

Find 100 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACGGTATTGATTTAATAAT+TGG 0.183259 8:-82130589 MsG0880047116.01.T01:CDS
TGCATCGTCTTATGTTCTTA+TGG 0.193420 8:-82129939 MsG0880047116.01.T01:three_prime_UTR
TAAATAGCTCCATAAAATTT+TGG 0.204224 8:+82129828 None:intergenic
TTCTGCCTCTTCGCTAAATA+TGG 0.270909 8:+82130637 None:intergenic
GTTAGAGTATTATCTACTTT+AGG 0.298550 8:-82130382 MsG0880047116.01.T01:CDS
AATCATGTTTGATACTTTGT+AGG 0.300249 8:-82130111 MsG0880047116.01.T01:three_prime_UTR
TGGTTCCGAGTTCTGTGTTC+TGG 0.316171 8:-82130281 MsG0880047116.01.T01:CDS
TCGATGGAGGAAAATGATTC+AGG 0.320541 8:+82135371 None:intergenic
CCTTGAGTACACCGTCTTCA+TGG 0.326377 8:+82135178 None:intergenic
GCATCGTCTTATGTTCTTAT+GGG 0.330706 8:-82129938 MsG0880047116.01.T01:three_prime_UTR
ATTTAATAATTGGCTGTAAT+GGG 0.331979 8:-82130579 MsG0880047116.01.T01:CDS
TTGGCTGTAATGGGTTCATA+TGG 0.334973 8:-82130570 MsG0880047116.01.T01:CDS
GATTTAATAATTGGCTGTAA+TGG 0.340846 8:-82130580 MsG0880047116.01.T01:CDS
GAGGTTGGTGACATTGTTAT+TGG 0.373464 8:-82134877 MsG0880047116.01.T01:CDS
TGCTCAGAAGCGTTGGAGAT+TGG 0.380676 8:-82134749 MsG0880047116.01.T01:CDS
CTTGCACCTGCGGGGAGATG+TGG 0.409760 8:-82130044 MsG0880047116.01.T01:three_prime_UTR
AGGTTGGTGACATTGTTATT+GGG 0.422995 8:-82134876 MsG0880047116.01.T01:CDS
GTAATGGGTTCATATGGGTT+GGG 0.429426 8:-82130564 MsG0880047116.01.T01:CDS
GTTAAAGCTCTTGCACCTGC+GGG 0.438119 8:-82130053 MsG0880047116.01.T01:three_prime_UTR
AATTTGACAATTCACGGCTC+AGG 0.443252 8:+82135441 None:intergenic
ATCATGTTTGATACTTTGTA+GGG 0.444314 8:-82130110 MsG0880047116.01.T01:three_prime_UTR
TGTCCGAATTTGACAATTCA+CGG 0.446189 8:+82135435 None:intergenic
ATGTCCGCGCTTTACGCTCA+AGG 0.446863 8:-82135077 MsG0880047116.01.T01:intron
GAGCCGTGAATTGTCAAATT+CGG 0.448134 8:-82135438 MsG0880047116.01.T01:five_prime_UTR
GTAGGGTGGCACTTAAAAGT+TGG 0.464300 8:-82130093 MsG0880047116.01.T01:three_prime_UTR
GTCTTCATGGTTGACGGGAA+TGG 0.468255 8:+82135191 None:intergenic
GTGTTATTGCAGCTTAGTAC+TGG 0.468619 8:-82130679 MsG0880047116.01.T01:intron
GCCATGATTTAGTATACAAA+AGG 0.470847 8:+82129900 None:intergenic
AATGATTCAGGGTGGTAGCT+AGG 0.475270 8:+82135383 None:intergenic
ATGGTTGACGGGAATGGAAT+CGG 0.476761 8:+82135197 None:intergenic
TTGCACCTGCGGGGAGATGT+GGG 0.480487 8:-82130043 MsG0880047116.01.T01:three_prime_UTR
AATCCCTCTCATGGCGGTGG+CGG 0.480504 8:+82135323 None:intergenic
CAAAATACCTGTACACCATC+AGG 0.485161 8:+82134676 None:intergenic
TACCGTACTGCTCTATATGA+TGG 0.496851 8:+82130605 None:intergenic
TGTAATGGGTTCATATGGGT+TGG 0.507430 8:-82130565 MsG0880047116.01.T01:CDS
AAAACAAGATATCTCCATAA+GGG 0.508510 8:+82134647 None:intergenic
AGACAAGAAAGTACATATGC+AGG 0.515241 8:-82130417 MsG0880047116.01.T01:CDS
ATTTGACAATTCACGGCTCA+GGG 0.516799 8:+82135442 None:intergenic
TATAACATCGGAAATCATCA+AGG 0.519948 8:-82130353 MsG0880047116.01.T01:CDS
CGATGGAGGAAAATGATTCA+GGG 0.522107 8:+82135372 None:intergenic
GACGGGAATGGAATCGGCTA+TGG 0.522254 8:+82135203 None:intergenic
CCATGAAGACGGTGTACTCA+AGG 0.523112 8:-82135178 MsG0880047116.01.T01:CDS
TTAAAACCTGTGGATCAGAT+TGG 0.524228 8:+82130497 None:intergenic
ATGATTCAGGGTGGTAGCTA+GGG 0.532900 8:+82135384 None:intergenic
TGGAGCTATTTAAATTGTAG+TGG 0.536304 8:-82129817 MsG0880047116.01.T01:three_prime_UTR
CTTGATATACACGACATGCT+TGG 0.537424 8:-82130301 MsG0880047116.01.T01:CDS
TGTAGGTTGCTCAGAAGCGT+TGG 0.537717 8:-82134756 MsG0880047116.01.T01:intron
GGCAACCAGAACACAGAACT+CGG 0.542834 8:+82130276 None:intergenic
ACACCGTCTTCATGGTTGAC+GGG 0.544563 8:+82135186 None:intergenic
TGAAGCATCGGAATTGACCT+TGG 0.545099 8:+82135230 None:intergenic
TTTAGGATTCATTATAACAT+CGG 0.551488 8:-82130365 MsG0880047116.01.T01:CDS
TGTTATTGGGCGTGTCATTG+AGG 0.552525 8:-82134863 MsG0880047116.01.T01:intron
GAACATGCCTGATGGTGTAC+AGG 0.553150 8:-82134683 MsG0880047116.01.T01:CDS
CTGAATCCCTCTCATGGCGG+TGG 0.554651 8:+82135320 None:intergenic
GTTCTAGAGCCTTCTGTAGA+CGG 0.559286 8:+82135271 None:intergenic
TGTTAAAGCTCTTGCACCTG+CGG 0.559542 8:-82130054 MsG0880047116.01.T01:three_prime_UTR
TAATGGGTTCATATGGGTTG+GGG 0.559641 8:-82130563 MsG0880047116.01.T01:CDS
GCCACCGCCACCGCCATGAG+AGG 0.560292 8:-82135327 MsG0880047116.01.T01:intron
AGTGAACCAATCTGATCCAC+AGG 0.562822 8:-82130503 MsG0880047116.01.T01:CDS
TTATTGGGAGTTAAAACCTG+TGG 0.572686 8:+82130487 None:intergenic
CCTGAAAAGCAAGGTGGCAA+CGG 0.573465 8:+82129999 None:intergenic
GGCTATGGTGACTGAAGCAT+CGG 0.574286 8:+82135218 None:intergenic
CGGTGGCTTAGTTCAATCGA+TGG 0.575024 8:+82135355 None:intergenic
CCACCGCCACCGCCATGAGA+GGG 0.576143 8:-82135326 MsG0880047116.01.T01:intron
TACACCGTCTTCATGGTTGA+CGG 0.576605 8:+82135185 None:intergenic
CTCGACGACGCCACAGAGAG+TGG 0.577747 8:+82135119 None:intergenic
ATAACAATGTCACCAACCTC+AGG 0.577851 8:+82134880 None:intergenic
TCTGCTATGAACATGCCTGA+TGG 0.579601 8:-82134691 MsG0880047116.01.T01:CDS
TGGCTGTAATGGGTTCATAT+GGG 0.580058 8:-82130569 MsG0880047116.01.T01:CDS
TTCAGGTACAAACCTGAGGT+TGG 0.581754 8:-82134892 MsG0880047116.01.T01:intron
GTATATCAAGATTCGCAGAA+AGG 0.583884 8:+82130314 None:intergenic
CCTTGGAAGAGAGAGATTCG+AGG 0.584073 8:+82135247 None:intergenic
GACAAGAAAGTACATATGCA+GGG 0.586584 8:-82130416 MsG0880047116.01.T01:CDS
CTGTAACTGAATCCCTCTCA+TGG 0.591291 8:+82135314 None:intergenic
CCTCGAATCTCTCTCTTCCA+AGG 0.597912 8:-82135247 MsG0880047116.01.T01:CDS
ATGTTTGATACTTTGTAGGG+TGG 0.604286 8:-82130107 MsG0880047116.01.T01:three_prime_UTR
TTCATCCCACATCTCCCCGC+AGG 0.604886 8:+82130038 None:intergenic
GGTGGCACTTAAAAGTTGGA+TGG 0.605315 8:-82130089 MsG0880047116.01.T01:three_prime_UTR
TCAGAAACTCCGTCTACAGA+AGG 0.607305 8:-82135280 MsG0880047116.01.T01:CDS
CACGGAACCGCTGACCTCGA+GGG 0.617843 8:-82135153 MsG0880047116.01.T01:CDS
GAAGTTGTTGCCACTCTCTG+TGG 0.627055 8:-82135129 MsG0880047116.01.T01:CDS
AACTTCGCCCTCGAGGTCAG+CGG 0.630661 8:+82135146 None:intergenic
ACACGGAACCGCTGACCTCG+AGG 0.633573 8:-82135154 MsG0880047116.01.T01:CDS
TGTTGAAGTCAGAGATGACA+TGG 0.636734 8:-82130536 MsG0880047116.01.T01:CDS
CATGAAGACGGTGTACTCAA+GGG 0.637304 8:-82135177 MsG0880047116.01.T01:CDS
TCACACCATATTTAGCGAAG+AGG 0.637550 8:-82130642 MsG0880047116.01.T01:CDS
TTCCATCATATAGAGCAGTA+CGG 0.640183 8:-82130607 MsG0880047116.01.T01:CDS
TAATTTCAGGTACAAACCTG+AGG 0.641535 8:-82134896 MsG0880047116.01.T01:intron
ATTCCCGTCAACCATGAAGA+CGG 0.643895 8:-82135189 MsG0880047116.01.T01:CDS
AGCGGTAGATTGTGAAATCG+TGG 0.646556 8:-82130216 MsG0880047116.01.T01:exon
ATTACCTTGAGCGTAAAGCG+CGG 0.649059 8:+82135073 None:intergenic
ATAACATCGGAAATCATCAA+GGG 0.651590 8:-82130352 MsG0880047116.01.T01:CDS
GACGGTGTACTCAAGGGACA+CGG 0.652374 8:-82135171 MsG0880047116.01.T01:CDS
TGGCAACAACTTCGCCCTCG+AGG 0.655283 8:+82135139 None:intergenic
GGTGTCACTCCTGAAAAGCA+AGG 0.658369 8:+82129990 None:intergenic
TGGCTTAGTTCAATCGATGG+AGG 0.676802 8:+82135358 None:intergenic
TTAAAGCTCTTGCACCTGCG+GGG 0.692107 8:-82130052 MsG0880047116.01.T01:three_prime_UTR
TAACTGAATCCCTCTCATGG+CGG 0.742399 8:+82135317 None:intergenic
GTCACTCCTGAAAAGCAAGG+TGG 0.746925 8:+82129993 None:intergenic
TGGAGGAAAATGATTCAGGG+TGG 0.749960 8:+82135375 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCAATTTAAACAAAAAT+TGG + Chr8:82133239-82133258 None:intergenic 10.0%
!! TATAAAATTTCTTAAAGAAA+TGG + Chr8:82130693-82130712 None:intergenic 10.0%
!!! AATTTTTGTTTAAATTGAAT+TGG - Chr8:82133238-82133257 MsG0880047116.01.T01:intron 10.0%
!! AAACAAAAACAAAACAATTA+AGG + Chr8:82130328-82130347 None:intergenic 15.0%
!! ATAAAGATATTATGAAGTAT+AGG - Chr8:82131063-82131082 MsG0880047116.01.T01:intron 15.0%
!! CAATAACGTTTAAAAATTAA+AGG + Chr8:82131436-82131455 None:intergenic 15.0%
!! TACAAAAAAAAAATGATAGT+CGG - Chr8:82134280-82134299 MsG0880047116.01.T01:intron 15.0%
!! TGAATTAAATAAACAAGTAA+TGG + Chr8:82132613-82132632 MsG0880047115.01.T01:CDS 15.0%
!! TTAAAAATTAAAGGCAATAT+GGG + Chr8:82131427-82131446 None:intergenic 15.0%
!! TTTAAAAATTAAAGGCAATA+TGG + Chr8:82131428-82131447 None:intergenic 15.0%
!!! AATTAAAAGTGATTTTGTAA+TGG - Chr8:82131892-82131911 MsG0880047116.01.T01:intron 15.0%
!!! CAATAAAAGAATGTTTTAAA+AGG + Chr8:82134239-82134258 None:intergenic 15.0%
!!! TTAAGATTTACTTTTTATGA+AGG - Chr8:82134091-82134110 MsG0880047116.01.T01:intron 15.0%
!!! TTATTGAATGTAATTTTCAT+GGG + Chr8:82131047-82131066 None:intergenic 15.0%
!!! TTTATTGAATGTAATTTTCA+TGG + Chr8:82131048-82131067 None:intergenic 15.0%
!! AAAGTAAATCTTAAGAAACA+TGG + Chr8:82134085-82134104 None:intergenic 20.0%
!! AAATGTCAACATTAAATCAA+CGG + Chr8:82132829-82132848 None:intergenic 20.0%
!! ATACTTTGTTAATAACAAGA+TGG + Chr8:82133068-82133087 None:intergenic 20.0%
!! ATCAAATCAAATTCAGAAAA+CGG + Chr8:82130447-82130466 None:intergenic 20.0%
!! ATTTAATAATTGGCTGTAAT+GGG - Chr8:82134685-82134704 MsG0880047116.01.T01:CDS 20.0%
!! CTTACAAATATAAAACTGAA+CGG - Chr8:82134368-82134387 MsG0880047116.01.T01:intron 20.0%
!! GAAAGAAAAAATCTAAATGA+GGG + Chr8:82133977-82133996 None:intergenic 20.0%
!! TAATTCACAATAGTGAAATT+GGG + Chr8:82133200-82133219 None:intergenic 20.0%
!! TACATCAAAAATCCAAAAAT+AGG + Chr8:82131560-82131579 None:intergenic 20.0%
!! TTAATTCACAATAGTGAAAT+TGG + Chr8:82133201-82133220 None:intergenic 20.0%
!! TTGATGTTATATAACAAAGT+AGG - Chr8:82133390-82133409 MsG0880047116.01.T01:intron 20.0%
!! TTTAAACAAAAATTGGCAAT+AGG + Chr8:82133232-82133251 None:intergenic 20.0%
!!! AATTAAACACTTTTTCATCT+AGG + Chr8:82130968-82130987 None:intergenic 20.0%
!!! AGTTATTTTTCAGAAATGAA+AGG - Chr8:82130719-82130738 MsG0880047116.01.T01:intron 20.0%
!!! ATGGTTTTGTAATTTGTTAT+TGG + Chr8:82133049-82133068 None:intergenic 20.0%
!!! ATTAAACACTTTTTCATCTA+GGG + Chr8:82130967-82130986 None:intergenic 20.0%
!!! GTTTTGTTTTTGTTTGTTAA+TGG - Chr8:82130333-82130352 MsG0880047116.01.T01:CDS 20.0%
!!! GTTTTTATAAGCACAAAAAT+AGG - Chr8:82133847-82133866 MsG0880047116.01.T01:intron 20.0%
!!! TAAATAGCTCCATAAAATTT+TGG + Chr8:82135439-82135458 None:intergenic 20.0%
!!! TAAATTTTATCGAATGAGAT+TGG - Chr8:82133274-82133293 MsG0880047116.01.T01:intron 20.0%
!!! TAATGTTTGTTTAATTTCAC+TGG - Chr8:82130466-82130485 MsG0880047116.01.T01:CDS 20.0%
!!! TACATTTAAAACTATATGAC+AGG + Chr8:82130994-82131013 None:intergenic 20.0%
!!! TACGGTATTGATTTAATAAT+TGG - Chr8:82134675-82134694 MsG0880047116.01.T01:CDS 20.0%
!!! TATTGAATGTAATTTTCATG+GGG + Chr8:82131046-82131065 None:intergenic 20.0%
!!! TGTATTTTGTAATACGTTTT+GGG - Chr8:82134501-82134520 MsG0880047116.01.T01:intron 20.0%
!!! TTGTATTTTGTAATACGTTT+TGG - Chr8:82134500-82134519 MsG0880047116.01.T01:intron 20.0%
!!! TTTAGGATTCATTATAACAT+CGG - Chr8:82134899-82134918 MsG0880047116.01.T01:intron 20.0%
! AAAAACAAGATATCTCCATA+AGG + Chr8:82130621-82130640 None:intergenic 25.0%
! AAAACAAGATATCTCCATAA+GGG + Chr8:82130620-82130639 None:intergenic 25.0%
! AAACAAAACAATTAAGGAAG+TGG + Chr8:82130322-82130341 None:intergenic 25.0%
! AAGAAGTCAAAAATATGGAA+AGG - Chr8:82134197-82134216 MsG0880047116.01.T01:intron 25.0%
! AAGACTATTGATATCTAAGA+AGG - Chr8:82132124-82132143 MsG0880047116.01.T01:intron 25.0%
! AATCATGTTTGATACTTTGT+AGG - Chr8:82135153-82135172 MsG0880047116.01.T01:CDS 25.0%
! AATGGAAACTCTAAATGATA+TGG - Chr8:82134336-82134355 MsG0880047116.01.T01:intron 25.0%
! AATGTTGACATTTGAGAAAA+GGG - Chr8:82132836-82132855 MsG0880047116.01.T01:intron 25.0%
! ACAAAAACAAAAAACAGACA+TGG + Chr8:82135306-82135325 None:intergenic 25.0%
! ACAAACTTGCAATATTATTC+AGG + Chr8:82131826-82131845 None:intergenic 25.0%
! ACAATTATATGACAAGTACA+AGG - Chr8:82132286-82132305 MsG0880047116.01.T01:intron 25.0%
! ATCAAAAATCCAAAAATAGG+AGG + Chr8:82131557-82131576 None:intergenic 25.0%
! ATCATATACCAAGTAATAGA+AGG - Chr8:82132632-82132651 MsG0880047116.01.T01:intron 25.0%
! ATCATGTTTGATACTTTGTA+GGG - Chr8:82135154-82135173 MsG0880047116.01.T01:CDS 25.0%
! ATGGAAACTCTAAATGATAT+GGG - Chr8:82134337-82134356 MsG0880047116.01.T01:intron 25.0%
! CAAAAACAAAAAACAGACAT+GGG + Chr8:82135305-82135324 None:intergenic 25.0%
! GATTTAATAATTGGCTGTAA+TGG - Chr8:82134684-82134703 MsG0880047116.01.T01:CDS 25.0%
! GGAAAGAAAAAATCTAAATG+AGG + Chr8:82133978-82133997 None:intergenic 25.0%
! TAATGTTGACATTTGAGAAA+AGG - Chr8:82132835-82132854 MsG0880047116.01.T01:intron 25.0%
! TATTGATCAAAGTAACAGTT+GGG - Chr8:82133173-82133192 MsG0880047116.01.T01:intron 25.0%
! TCAAAGAAACTAATAGAACA+GGG - Chr8:82133754-82133773 MsG0880047116.01.T01:intron 25.0%
! TGTGCTTATAAAAACTTCAA+AGG + Chr8:82133842-82133861 None:intergenic 25.0%
! TTAACCAATGTTTCATCAAT+AGG - Chr8:82132546-82132565 MsG0880047116.01.T01:intron 25.0%
! TTCAAAGAAACTAATAGAAC+AGG - Chr8:82133753-82133772 MsG0880047116.01.T01:intron 25.0%
! TTTGTAATGAAACACTAAAC+TGG + Chr8:82131657-82131676 None:intergenic 25.0%
!! AAACTCAGACCAAAATTTTA+TGG - Chr8:82135427-82135446 MsG0880047116.01.T01:five_prime_UTR 25.0%
!! AAGACTCACAGAATTTTTAT+TGG + Chr8:82134796-82134815 None:intergenic 25.0%
!! AAGATCCAAAATTTTACTAG+AGG + Chr8:82133363-82133382 None:intergenic 25.0%
!! AATGGCATTTTGCAATAATA+GGG + Chr8:82132943-82132962 None:intergenic 25.0%
!! ACGAGACAAAATTTTCAATT+TGG - Chr8:82131146-82131165 MsG0880047116.01.T01:intron 25.0%
!! AGACTCACAGAATTTTTATT+GGG + Chr8:82134795-82134814 None:intergenic 25.0%
!! ATAATGCTTTAAGTCCAATT+AGG + Chr8:82133583-82133602 None:intergenic 25.0%
!! GAATTTTGTGACTTAATTTC+AGG - Chr8:82130355-82130374 MsG0880047116.01.T01:CDS 25.0%
!! GTTAGAGTATTATCTACTTT+AGG - Chr8:82134882-82134901 MsG0880047116.01.T01:CDS 25.0%
!! TAATGCTTTAAGTCCAATTA+GGG + Chr8:82133582-82133601 None:intergenic 25.0%
!! TCCTTTTGTATACTAAATCA+TGG - Chr8:82135363-82135382 MsG0880047116.01.T01:intron 25.0%
!! TGCAAAATTTCTACAGTTTT+AGG - Chr8:82131790-82131809 MsG0880047116.01.T01:intron 25.0%
!! TGTATCACTCTTTGATTTAT+AGG + Chr8:82133152-82133171 None:intergenic 25.0%
!!! AGCTGATTCTCAATTTTTTT+TGG - Chr8:82131607-82131626 MsG0880047116.01.T01:intron 25.0%
!!! AGGCGTAGTAATTTTTAATT+TGG - Chr8:82130940-82130959 MsG0880047116.01.T01:intron 25.0%
!!! ATGGTCCTAAATTTTGAAAA+AGG + Chr8:82130674-82130693 None:intergenic 25.0%
!!! CCATTCCTTTTTCAAAATTT+AGG - Chr8:82130666-82130685 MsG0880047116.01.T01:CDS 25.0%
!!! CCTAAATTTTGAAAAAGGAA+TGG + Chr8:82130669-82130688 None:intergenic 25.0%
!!! CTGATTCTCAATTTTTTTTG+GGG - Chr8:82131609-82131628 MsG0880047116.01.T01:intron 25.0%
!!! GCTGATTCTCAATTTTTTTT+GGG - Chr8:82131608-82131627 MsG0880047116.01.T01:intron 25.0%
!!! GTGATCTATTTTTATTGGTT+GGG - Chr8:82131960-82131979 MsG0880047116.01.T01:intron 25.0%
!!! GTTATTGAGTTGAGTATTAT+GGG - Chr8:82131449-82131468 MsG0880047116.01.T01:intron 25.0%
!!! TGATCTATTTTTATTGGTTG+GGG - Chr8:82131961-82131980 MsG0880047116.01.T01:intron 25.0%
!!! TGATTCTCAATTTTTTTTGG+GGG - Chr8:82131610-82131629 MsG0880047116.01.T01:intron 25.0%
!!! TTACTTTATGTTGATAGCTA+TGG - Chr8:82134447-82134466 MsG0880047116.01.T01:intron 25.0%
!!! TTATTGAGTTGAGTATTATG+GGG - Chr8:82131450-82131469 MsG0880047116.01.T01:intron 25.0%
!!! TTGTAATTTGTTATTGGATG+TGG + Chr8:82133043-82133062 None:intergenic 25.0%
AATGATAGTCGGTTACATAA+CGG - Chr8:82134291-82134310 MsG0880047116.01.T01:intron 30.0%
AGTTATTGAGCTTATGCTAT+TGG - Chr8:82131999-82132018 MsG0880047116.01.T01:intron 30.0%
ATAACATCGGAAATCATCAA+GGG - Chr8:82134912-82134931 MsG0880047116.01.T01:intron 30.0%
ATATTGCAAGTTTGTGTGTT+AGG - Chr8:82131831-82131850 MsG0880047116.01.T01:intron 30.0%
ATTACACCTCAATCATAAAC+AGG + Chr8:82134404-82134423 None:intergenic 30.0%
CAAGCAAGAAGTCAAAAATA+TGG - Chr8:82134192-82134211 MsG0880047116.01.T01:intron 30.0%
CAGCTACTTCTTCAAAAAAT+TGG + Chr8:82131592-82131611 None:intergenic 30.0%
CCATTAGTAACAGTAGTAAA+TGG + Chr8:82134559-82134578 None:intergenic 30.0%
CCATTTACTACTGTTACTAA+TGG - Chr8:82134556-82134575 MsG0880047116.01.T01:intron 30.0%
CTATTGATATCTAAGAAGGA+TGG - Chr8:82132128-82132147 MsG0880047116.01.T01:intron 30.0%
CTTCTTATCCTTCTATTACT+TGG + Chr8:82132643-82132662 MsG0880047115.01.T01:CDS 30.0%
GAAGCTCAAATAAAAAGAAG+CGG - Chr8:82135030-82135049 MsG0880047116.01.T01:intron 30.0%
GCCATGATTTAGTATACAAA+AGG + Chr8:82135367-82135386 None:intergenic 30.0%
GTAATGACTAAATTAGCAGT+CGG + Chr8:82132258-82132277 None:intergenic 30.0%
TAAGCACAAAAATAGGAACA+AGG - Chr8:82133854-82133873 MsG0880047116.01.T01:intron 30.0%
TATAACATCGGAAATCATCA+AGG - Chr8:82134911-82134930 MsG0880047116.01.T01:intron 30.0%
TATGACCTGAATTGTGTATT+TGG - Chr8:82133604-82133623 MsG0880047116.01.T01:intron 30.0%
TATGGAAAGGTTTGTATTCT+TGG - Chr8:82134210-82134229 MsG0880047116.01.T01:intron 30.0%
TGAAAAGACTGTCATGTTTA+GGG - Chr8:82131094-82131113 MsG0880047116.01.T01:intron 30.0%
TGGAGCTATTTAAATTGTAG+TGG - Chr8:82135447-82135466 MsG0880047116.01.T01:five_prime_UTR 30.0%
TTGAAAAGACTGTCATGTTT+AGG - Chr8:82131093-82131112 MsG0880047116.01.T01:intron 30.0%
! ACATGACAGTCTTTTCAATT+TGG + Chr8:82131091-82131110 None:intergenic 30.0%
! AGAACAAGAGAAAAAGTACA+CGG - Chr8:82134818-82134837 MsG0880047116.01.T01:intron 30.0%
! CAATGGCATTTTGCAATAAT+AGG + Chr8:82132944-82132963 None:intergenic 30.0%
! CTTAGATATCAATAGTCTTG+TGG + Chr8:82132123-82132142 None:intergenic 30.0%
! GTATTGATCAAAGTAACAGT+TGG - Chr8:82133172-82133191 MsG0880047116.01.T01:intron 30.0%
! GTATTTTGCAATTTCCCTTA+TGG - Chr8:82130603-82130622 MsG0880047116.01.T01:CDS 30.0%
! TAGGACCTCTAGTAAAATTT+TGG - Chr8:82133355-82133374 MsG0880047116.01.T01:intron 30.0%
! TATATGCTGCGTCATATTTT+TGG - Chr8:82133924-82133943 MsG0880047116.01.T01:intron 30.0%
!! AAATATGCGCTGTATTTTTG+AGG - Chr8:82134032-82134051 MsG0880047116.01.T01:intron 30.0%
!! AGGGATTTTCAAGCTTAATT+GGG + Chr8:82133958-82133977 None:intergenic 30.0%
!! CGTTATTGAGTTGAGTATTA+TGG - Chr8:82131448-82131467 MsG0880047116.01.T01:intron 30.0%
!! TATCGAATGAGATTGGTTTA+AGG - Chr8:82133281-82133300 MsG0880047116.01.T01:intron 30.0%
!!! AAGGTGGATTTTGAGTTTTT+GGG - Chr8:82131935-82131954 MsG0880047116.01.T01:intron 30.0%
!!! AAGTTTTATTATCCCTTTGC+CGG - Chr8:82135081-82135100 MsG0880047116.01.T01:CDS 30.0%
!!! AATCACCTTCAGTTTTGATT+GGG - Chr8:82133880-82133899 MsG0880047116.01.T01:intron 30.0%
!!! ATTTTTGACTTCTTGCTTGA+AGG + Chr8:82134191-82134210 None:intergenic 30.0%
!!! CTTGTTTTTTGTTCTGCAAT+CGG - Chr8:82130632-82130651 MsG0880047116.01.T01:CDS 30.0%
!!! GGTGATCTATTTTTATTGGT+TGG - Chr8:82131959-82131978 MsG0880047116.01.T01:intron 30.0%
!!! TAAGGTGGATTTTGAGTTTT+TGG - Chr8:82131934-82131953 MsG0880047116.01.T01:intron 30.0%
!!! TTCTACAGTTTTAGGAGTAA+AGG - Chr8:82131798-82131817 MsG0880047116.01.T01:intron 30.0%
AAACAATTAAGGAAGTGGAG+AGG + Chr8:82130317-82130336 None:intergenic 35.0%
AAACTAATAGAACAGGGTGA+GGG - Chr8:82133760-82133779 MsG0880047116.01.T01:intron 35.0%
ACAAAAACTAGTTCAGTGTG+CGG - Chr8:82130749-82130768 MsG0880047116.01.T01:intron 35.0%
AGAAACCCAATCAAAACTGA+AGG + Chr8:82133888-82133907 None:intergenic 35.0%
AGAGCCTATTGATGAAACAT+TGG + Chr8:82132553-82132572 MsG0880047115.01.T01:CDS 35.0%
ATGGGGTTACAATAGTTAAC+AGG + Chr8:82131029-82131048 None:intergenic 35.0%
ATGTTTGATACTTTGTAGGG+TGG - Chr8:82135157-82135176 MsG0880047116.01.T01:CDS 35.0%
CCAAACCAAATACACAATTC+AGG + Chr8:82133612-82133631 None:intergenic 35.0%
CCATTTGTAGTGACTTTGTT+CGG - Chr8:82131682-82131701 MsG0880047116.01.T01:intron 35.0%
CCTGAATTGTGTATTTGGTT+TGG - Chr8:82133609-82133628 MsG0880047116.01.T01:intron 35.0%
CTCCAACTTCTGAATTTCAA+TGG + Chr8:82132961-82132980 None:intergenic 35.0%
CTTCCTTCTCTTAAAGAAAC+TGG - Chr8:82132479-82132498 MsG0880047116.01.T01:intron 35.0%
GAACTACCTGTTTATGATTG+AGG - Chr8:82134395-82134414 MsG0880047116.01.T01:intron 35.0%
GCATCGTCTTATGTTCTTAT+GGG - Chr8:82135326-82135345 MsG0880047116.01.T01:intron 35.0%
GTATATCAAGATTCGCAGAA+AGG + Chr8:82134953-82134972 None:intergenic 35.0%
TAAGAGAATTGCTCAGAAGA+TGG - Chr8:82132378-82132397 MsG0880047116.01.T01:intron 35.0%
TAAGAGAATTGCTCAGAAGA+TGG + Chr8:82132397-82132378 None:intergenic 35.0%
TATCACCACTTCTAAATGTC+AGG + Chr8:82131173-82131192 None:intergenic 35.0%
TCTTTCTTTCCTCGTAAAGA+TGG - Chr8:82132798-82132817 MsG0880047116.01.T01:intron 35.0%
TCTTTCTTTCTTCGCAAAGA+TGG + Chr8:82132347-82132366 None:intergenic 35.0%
TGATTAGTGTTTCTTCATGC+AGG + Chr8:82133706-82133725 None:intergenic 35.0%
TGCAAATGGGAGTTATTTGA+TGG - Chr8:82132895-82132914 MsG0880047116.01.T01:intron 35.0%
TGCATCGTCTTATGTTCTTA+TGG - Chr8:82135325-82135344 MsG0880047116.01.T01:exon 35.0%
TGCCATTGAAATTCAGAAGT+TGG - Chr8:82132956-82132975 MsG0880047116.01.T01:intron 35.0%
TGTCCGAATTTGACAATTCA+CGG + Chr8:82129832-82129851 None:intergenic 35.0%
TTAAAACCTGTGGATCAGAT+TGG + Chr8:82134770-82134789 None:intergenic 35.0%
TTATTGGGAGTTAAAACCTG+TGG + Chr8:82134780-82134799 None:intergenic 35.0%
TTCCATCATATAGAGCAGTA+CGG - Chr8:82134657-82134676 MsG0880047116.01.T01:CDS 35.0%
TTCTGAGCAATTCTCTTAAC+AGG + Chr8:82132788-82132769 MsG0880047115.01.T01:CDS 35.0%
TTGGCTTAAAATTCTGGTCT+GGG - Chr8:82133317-82133336 MsG0880047116.01.T01:intron 35.0%
TTGTGTGTTAGGTTTCCTTT+GGG - Chr8:82131842-82131861 MsG0880047116.01.T01:intron 35.0%
TTTCTTCATGCAGGCATAAA+AGG + Chr8:82133697-82133716 None:intergenic 35.0%
TTTGTGTGTTAGGTTTCCTT+TGG - Chr8:82131841-82131860 MsG0880047116.01.T01:intron 35.0%
! AAAAAACAGACATGGGTTGT+AGG + Chr8:82135298-82135317 None:intergenic 35.0%
! AAGCCAGTTTCTTTAAGAGA+AGG + Chr8:82132485-82132504 MsG0880047115.01.T01:CDS 35.0%
! AGACAAGAAAGTACATATGC+AGG - Chr8:82134847-82134866 MsG0880047116.01.T01:intron 35.0%
! CAGTGTTTGGCTTAAAATTC+TGG - Chr8:82133311-82133330 MsG0880047116.01.T01:intron 35.0%
! GACAAGAAAGTACATATGCA+GGG - Chr8:82134848-82134867 MsG0880047116.01.T01:intron 35.0%
! GTTTCTTTAAGAGAAGGAAG+TGG + Chr8:82132479-82132498 MsG0880047115.01.T01:CDS 35.0%
! TAAAAAACTTTGAGAGCCGA+CGG + Chr8:82132424-82132443 MsG0880047115.01.T01:CDS 35.0%
! TAATTTCAGGTACAAACCTG+AGG - Chr8:82130368-82130387 MsG0880047116.01.T01:CDS 35.0%
! TGACTCGACTCGTTAAAAAT+TGG + Chr8:82133521-82133540 None:intergenic 35.0%
! TGGTTTGGATCAACATTTGA+TGG - Chr8:82133624-82133643 MsG0880047116.01.T01:intron 35.0%
! TGTGTTTCTTTTCTCTATGC+AGG - Chr8:82130920-82130939 MsG0880047116.01.T01:intron 35.0%
! TTTGGCTTAAAATTCTGGTC+TGG - Chr8:82133316-82133335 MsG0880047116.01.T01:intron 35.0%
! TTTGTTGTGTTGTGTTGTGT+AGG - Chr8:82130491-82130510 MsG0880047116.01.T01:CDS 35.0%
!! AATGAGATTGGTTTAAGGTC+TGG - Chr8:82133286-82133305 MsG0880047116.01.T01:intron 35.0%
!! AGGTTGGTGACATTGTTATT+GGG - Chr8:82130388-82130407 MsG0880047116.01.T01:CDS 35.0%
!! ATGAGATTGGTTTAAGGTCT+GGG - Chr8:82133287-82133306 MsG0880047116.01.T01:intron 35.0%
!! CAATCACCTTCAGTTTTGAT+TGG - Chr8:82133879-82133898 MsG0880047116.01.T01:intron 35.0%
!! GAGGGATTTTCAAGCTTAAT+TGG + Chr8:82133959-82133978 None:intergenic 35.0%
!! GGATGAAGTGTTTTTCTGAT+TGG - Chr8:82135242-82135261 MsG0880047116.01.T01:CDS 35.0%
!! TGAAGTGGGTATACTGATTT+AGG - Chr8:82133666-82133685 MsG0880047116.01.T01:intron 35.0%
!!! ACCTTTTTTTAGCTCGTGTT+CGG + Chr8:82133470-82133489 None:intergenic 35.0%
!!! AGTTTTATTATCCCTTTGCC+GGG - Chr8:82135082-82135101 MsG0880047116.01.T01:CDS 35.0%
!!! GGGGAAAGTTATTGGTTTTT+TGG - Chr8:82131733-82131752 MsG0880047116.01.T01:intron 35.0%
!!! GGGTGGTGATCTATTTTTAT+TGG - Chr8:82131955-82131974 MsG0880047116.01.T01:intron 35.0%
!!! TTCCTTTCCTATTTTTACCC+CGG + Chr8:82135103-82135122 None:intergenic 35.0%
!!! TTTTTTCTTTCCACTGCTAG+AGG - Chr8:82133986-82134005 MsG0880047116.01.T01:intron 35.0%
AACTAATAGAACAGGGTGAG+GGG - Chr8:82133761-82133780 MsG0880047116.01.T01:intron 40.0%
AAGCCAATTTCTCGAAGAGA+AGG - Chr8:82132660-82132679 MsG0880047116.01.T01:intron 40.0%
AATGCAAGATTCCTGGAATC+AGG - Chr8:82134421-82134440 MsG0880047116.01.T01:intron 40.0%
AATGTTCTCGAGCTTCTTGA+AGG + Chr8:82132170-82132189 None:intergenic 40.0%
AATTTGACAATTCACGGCTC+AGG + Chr8:82129826-82129845 None:intergenic 40.0%
ACAGACCAATACAACTCGTT+CGG + Chr8:82133429-82133448 None:intergenic 40.0%
ACGAAGGAGAGAAGAATACT+GGG + Chr8:82131491-82131510 None:intergenic 40.0%
ACTATAGTCAGATAACCTCC+AGG + Chr8:82130859-82130878 None:intergenic 40.0%
AGAAGGATGGTCTATTATCC+AGG - Chr8:82132141-82132160 MsG0880047116.01.T01:intron 40.0%
AGAGAAGGAAGTGGATGTAT+TGG + Chr8:82132470-82132489 MsG0880047115.01.T01:CDS 40.0%
ATAACAATGTCACCAACCTC+AGG + Chr8:82130387-82130406 None:intergenic 40.0%
ATAACCTCCAGGATGAAACA+AGG + Chr8:82130848-82130867 None:intergenic 40.0%
ATGCAAGATTCCTGGAATCA+GGG - Chr8:82134422-82134441 MsG0880047116.01.T01:intron 40.0%
ATTGGGATACGGTTTCTATC+AGG + Chr8:82132452-82132471 MsG0880047115.01.T01:CDS 40.0%
ATTTGACAATTCACGGCTCA+GGG + Chr8:82129825-82129844 None:intergenic 40.0%
CAAAATACCTGTACACCATC+AGG + Chr8:82130591-82130610 None:intergenic 40.0%
CATGTCCTCTCTTTGTGATT+TGG - Chr8:82132741-82132760 MsG0880047116.01.T01:intron 40.0%
CCGAACAAAGTCACTACAAA+TGG + Chr8:82131685-82131704 None:intergenic 40.0%
CCTAAACTATGTATGTCCAC+AGG - Chr8:82134131-82134150 MsG0880047116.01.T01:intron 40.0%
CCTGTGGACATACATAGTTT+AGG + Chr8:82134134-82134153 None:intergenic 40.0%
CGATGGAGGAAAATGATTCA+GGG + Chr8:82129895-82129914 None:intergenic 40.0%
CTTCCTTCTCTTCGAGAAAT+TGG + Chr8:82132666-82132685 MsG0880047115.01.T01:CDS 40.0%
CTTGATATACACGACATGCT+TGG - Chr8:82134963-82134982 MsG0880047116.01.T01:intron 40.0%
CTTTGTCGTGTTCTCTAGTT+AGG - Chr8:82131707-82131726 MsG0880047116.01.T01:intron 40.0%
GAAACTAATAGAACAGGGTG+AGG - Chr8:82133759-82133778 MsG0880047116.01.T01:intron 40.0%
GAAGTCTGTCTTCATGAAGT+GGG - Chr8:82133652-82133671 MsG0880047116.01.T01:intron 40.0%
GAAGTGGATGTATTGGGATA+CGG + Chr8:82132463-82132482 MsG0880047115.01.T01:CDS 40.0%
GACATTTGAGAAAAGGGAGT+GGG - Chr8:82132842-82132861 MsG0880047116.01.T01:intron 40.0%
GAGAAGGAAGTGGATGTATT+GGG + Chr8:82132469-82132488 MsG0880047115.01.T01:CDS 40.0%
GAGCCGTGAATTGTCAAATT+CGG - Chr8:82129826-82129845 MsG0880047116.01.T01:three_prime_UTR 40.0%
GCACTTGTAGTGATTGTGTA+TGG - Chr8:82134469-82134488 MsG0880047116.01.T01:intron 40.0%
GCTGCATAGGTTAAGAAGTA+AGG + Chr8:82130220-82130239 None:intergenic 40.0%
GTGGTCAATGTTTGACATGT+TGG + Chr8:82132104-82132123 None:intergenic 40.0%
GTTGTGAGGCTATTGCAAAT+GGG - Chr8:82132882-82132901 MsG0880047116.01.T01:intron 40.0%
TACCGTACTGCTCTATATGA+TGG + Chr8:82134662-82134681 None:intergenic 40.0%
TAGTCTTCAGAGGTAAAGTG+CGG + Chr8:82132200-82132219 None:intergenic 40.0%
TATCACCATGTAGTCTTCAG+AGG + Chr8:82132210-82132229 None:intergenic 40.0%
TCACACCATATTTAGCGAAG+AGG - Chr8:82134622-82134641 MsG0880047116.01.T01:intron 40.0%
TCGATGGAGGAAAATGATTC+AGG + Chr8:82129896-82129915 None:intergenic 40.0%
TCGTGTTCTCTAGTTAGGAA+GGG - Chr8:82131712-82131731 MsG0880047116.01.T01:intron 40.0%
TGACATTTGAGAAAAGGGAG+TGG - Chr8:82132841-82132860 MsG0880047116.01.T01:intron 40.0%
TGTTGAAGTCAGAGATGACA+TGG - Chr8:82134728-82134747 MsG0880047116.01.T01:CDS 40.0%
TGTTGTGAGGCTATTGCAAA+TGG - Chr8:82132881-82132900 MsG0880047116.01.T01:intron 40.0%
TGTTTCATCAATAGGCTCTC+TGG - Chr8:82132554-82132573 MsG0880047116.01.T01:intron 40.0%
TTACACTAGACCATGTTGAG+AGG - Chr8:82131765-82131784 MsG0880047116.01.T01:intron 40.0%
TTAGGAAGGGGGAAAGTTAT+TGG - Chr8:82131725-82131744 MsG0880047116.01.T01:intron 40.0%
TTCAGAAGTTGGAGATACAG+TGG - Chr8:82132967-82132986 MsG0880047116.01.T01:intron 40.0%
TTCTGCCTCTTCGCTAAATA+TGG + Chr8:82134630-82134649 None:intergenic 40.0%
TTGGTCCTGACATTTAGAAG+TGG - Chr8:82131165-82131184 MsG0880047116.01.T01:intron 40.0%
TTGTACAGCTGTATGCATCT+TGG - Chr8:82131239-82131258 MsG0880047116.01.T01:intron 40.0%
TTTCCTTTGGGTGGATGAAT+TGG - Chr8:82131854-82131873 MsG0880047116.01.T01:intron 40.0%
! AAAAAACTTTGAGAGCCGAC+GGG + Chr8:82132423-82132442 MsG0880047115.01.T01:CDS 40.0%
! AGCTTCATGCCTCCTATTTT+TGG - Chr8:82131545-82131564 MsG0880047116.01.T01:intron 40.0%
! ATCTTGGTAGTCAATAGCAG+TGG - Chr8:82131255-82131274 MsG0880047116.01.T01:intron 40.0%
! ATTTTGCAAGCCTCTCAACA+TGG + Chr8:82131778-82131797 None:intergenic 40.0%
! CAGATGAGTTCGATTTGACT+CGG - Chr8:82133545-82133564 MsG0880047116.01.T01:intron 40.0%
! CATTTTGTACTGTCTCTGAC+CGG + Chr8:82134320-82134339 None:intergenic 40.0%
! CTTTACCTCTGAAGACTACA+TGG - Chr8:82132202-82132221 MsG0880047116.01.T01:intron 40.0%
! GTGTTATTGCAGCTTAGTAC+TGG - Chr8:82134585-82134604 MsG0880047116.01.T01:intron 40.0%
! TCTCCTTTCAGCCTCTTTTT+CGG + Chr8:82135012-82135031 None:intergenic 40.0%
! TGTTTTCACATGTGCCACAT+CGG - Chr8:82133096-82133115 MsG0880047116.01.T01:intron 40.0%
! TTGTTGACCTTGTTTCATCC+TGG - Chr8:82130838-82130857 MsG0880047116.01.T01:intron 40.0%
!! AGAAGGAAGTTGATGTCTTC+GGG - Chr8:82132677-82132696 MsG0880047116.01.T01:intron 40.0%
!! GAGAAGGAAGTTGATGTCTT+CGG - Chr8:82132676-82132695 MsG0880047116.01.T01:intron 40.0%
!! GAGGTTGGTGACATTGTTAT+TGG - Chr8:82130387-82130406 MsG0880047116.01.T01:CDS 40.0%
!! GTAATGGGTTCATATGGGTT+GGG - Chr8:82134700-82134719 MsG0880047116.01.T01:CDS 40.0%
!! GTTTGGTGCAGCTCATATTA+AGG - Chr8:82131329-82131348 MsG0880047116.01.T01:intron 40.0%
!! GTTTTATTATCCCTTTGCCG+GGG - Chr8:82135083-82135102 MsG0880047116.01.T01:CDS 40.0%
!! TAATGGGTTCATATGGGTTG+GGG - Chr8:82134701-82134720 MsG0880047116.01.T01:CDS 40.0%
!! TATGCGCTGTATTTTTGAGG+AGG - Chr8:82134035-82134054 MsG0880047116.01.T01:intron 40.0%
!! TGAGATTGGTTTAAGGTCTG+GGG - Chr8:82133288-82133307 MsG0880047116.01.T01:intron 40.0%
!! TGGCTGTAATGGGTTCATAT+GGG - Chr8:82134695-82134714 MsG0880047116.01.T01:CDS 40.0%
!! TGTAATGGGTTCATATGGGT+TGG - Chr8:82134699-82134718 MsG0880047116.01.T01:CDS 40.0%
!! TTGGCTGTAATGGGTTCATA+TGG - Chr8:82134694-82134713 MsG0880047116.01.T01:CDS 40.0%
!!! GTGGATTTTGAGTTTTTGGG+TGG - Chr8:82131938-82131957 MsG0880047116.01.T01:intron 40.0%
AATGATTCAGGGTGGTAGCT+AGG + Chr8:82129884-82129903 None:intergenic 45.0%
ACCATGCGAAAGTAGTAAGG+TGG - Chr8:82131919-82131938 MsG0880047116.01.T01:intron 45.0%
AGAAGTGGTGATAGCACCTA+CGG - Chr8:82131180-82131199 MsG0880047116.01.T01:intron 45.0%
AGAAGTTGGAGATACAGTGG+AGG - Chr8:82132970-82132989 MsG0880047116.01.T01:intron 45.0%
AGCAGTCGGCACACATATTA+TGG + Chr8:82132244-82132263 None:intergenic 45.0%
AGCGGTAGATTGTGAAATCG+TGG - Chr8:82135048-82135067 MsG0880047116.01.T01:intron 45.0%
AGGCAATATGGGAGTTTCGA+AGG + Chr8:82131416-82131435 None:intergenic 45.0%
AGGTCCTACCAGTTCTTGTT+TGG + Chr8:82133343-82133362 None:intergenic 45.0%
AGTGAACCAATCTGATCCAC+AGG - Chr8:82134761-82134780 MsG0880047116.01.T01:intron 45.0%
AGTGTCAGTATGTGCTGCAT+AGG + Chr8:82130233-82130252 None:intergenic 45.0%
ATCACAAAGAGATGACCCGT+CGG - Chr8:82132405-82132424 MsG0880047116.01.T01:intron 45.0%
ATGATTCAGGGTGGTAGCTA+GGG + Chr8:82129883-82129902 None:intergenic 45.0%
ATGCCAATTCATCCACCCAA+AGG + Chr8:82131860-82131879 None:intergenic 45.0%
ATGGTTGACGGGAATGGAAT+CGG + Chr8:82130070-82130089 None:intergenic 45.0%
ATTACCTTGAGCGTAAAGCG+CGG + Chr8:82130194-82130213 None:intergenic 45.0%
ATTCCCGTCAACCATGAAGA+CGG - Chr8:82130075-82130094 MsG0880047116.01.T01:three_prime_UTR 45.0%
CACGAAGGAGAGAAGAATAC+TGG + Chr8:82131492-82131511 None:intergenic 45.0%
CAGTGGAGGCTTATGTTACT+TGG - Chr8:82132984-82133003 MsG0880047116.01.T01:intron 45.0%
CATGAAGACGGTGTACTCAA+GGG - Chr8:82130087-82130106 MsG0880047116.01.T01:three_prime_UTR 45.0%
CGAAGTCTGTCTTCATGAAG+TGG - Chr8:82133651-82133670 MsG0880047116.01.T01:intron 45.0%
CGGGTCATCTCTTTGTGATT+TGG + Chr8:82132404-82132423 None:intergenic 45.0%
CGGTCAGAGACAGTACAAAA+TGG - Chr8:82134318-82134337 MsG0880047116.01.T01:intron 45.0%
CGTGTTCTCTAGTTAGGAAG+GGG - Chr8:82131713-82131732 MsG0880047116.01.T01:intron 45.0%
CTGAACCGAACGAGTTGTAT+TGG - Chr8:82133421-82133440 MsG0880047116.01.T01:intron 45.0%
CTGTAACTGAATCCCTCTCA+TGG + Chr8:82129953-82129972 None:intergenic 45.0%
GAGGTGTAATGCAAGATTCC+TGG - Chr8:82134414-82134433 MsG0880047116.01.T01:intron 45.0%
GATGGCCAAATCACAAAGAG+AGG + Chr8:82132415-82132396 MsG0880047115.01.T01:CDS 45.0%
GATGTTCTCTGCAAACACGA+AGG + Chr8:82131507-82131526 None:intergenic 45.0%
GCCGAACACGAGCTAAAAAA+AGG - Chr8:82133466-82133485 MsG0880047116.01.T01:intron 45.0%
GGTGGCACTTAAAAGTTGGA+TGG - Chr8:82135175-82135194 MsG0880047116.01.T01:CDS 45.0%
GTAATCACATGTGCCAGTGT+CGG - Chr8:82130262-82130281 MsG0880047116.01.T01:CDS 45.0%
GTAGGGTGGCACTTAAAAGT+TGG - Chr8:82135171-82135190 MsG0880047116.01.T01:CDS 45.0%
GTCGTGTTCTCTAGTTAGGA+AGG - Chr8:82131711-82131730 MsG0880047116.01.T01:intron 45.0%
GTGACCATGCGAAAGTAGTA+AGG - Chr8:82131916-82131935 MsG0880047116.01.T01:intron 45.0%
GTGTTCTCTAGTTAGGAAGG+GGG - Chr8:82131714-82131733 MsG0880047116.01.T01:intron 45.0%
TAAAGTAACCCCCTGATTCC+AGG + Chr8:82134435-82134454 None:intergenic 45.0%
TAACTGAATCCCTCTCATGG+CGG + Chr8:82129950-82129969 None:intergenic 45.0%
TACACCGTCTTCATGGTTGA+CGG + Chr8:82130082-82130101 None:intergenic 45.0%
TAGTCAATAGCAGTGGTTCG+CGG - Chr8:82131262-82131281 MsG0880047116.01.T01:intron 45.0%
TCAGAAACTCCGTCTACAGA+AGG - Chr8:82129984-82130003 MsG0880047116.01.T01:three_prime_UTR 45.0%
TCCACCTTACTACTTTCGCA+TGG + Chr8:82131923-82131942 None:intergenic 45.0%
TCGTACTCATGGATGTTGTG+AGG - Chr8:82132868-82132887 MsG0880047116.01.T01:intron 45.0%
TCTGCTATGAACATGCCTGA+TGG - Chr8:82130573-82130592 MsG0880047116.01.T01:CDS 45.0%
TGCAAGATTCCTGGAATCAG+GGG - Chr8:82134423-82134442 MsG0880047116.01.T01:intron 45.0%
TGCAGCTCATATTAAGGCTG+CGG - Chr8:82131335-82131354 MsG0880047116.01.T01:intron 45.0%
TGCCGGGGTAAAAATAGGAA+AGG - Chr8:82135098-82135117 MsG0880047116.01.T01:CDS 45.0%
TGGAGGAAAATGATTCAGGG+TGG + Chr8:82129892-82129911 None:intergenic 45.0%
TGGCTTAGTTCAATCGATGG+AGG + Chr8:82129909-82129928 None:intergenic 45.0%
TGTGTTAGGTTTCCTTTGGG+TGG - Chr8:82131845-82131864 MsG0880047116.01.T01:intron 45.0%
TGTTAAAGCTCTTGCACCTG+CGG - Chr8:82135210-82135229 MsG0880047116.01.T01:CDS 45.0%
TTAAACTCTACACTGCCCGT+AGG + Chr8:82131199-82131218 None:intergenic 45.0%
TTCAGGTACAAACCTGAGGT+TGG - Chr8:82130372-82130391 MsG0880047116.01.T01:CDS 45.0%
TTGCCGAAAAAGAGGCTGAA+AGG - Chr8:82135006-82135025 MsG0880047116.01.T01:intron 45.0%
TTGCTTACCTACTTCCGATG+TGG + Chr8:82133113-82133132 None:intergenic 45.0%
! AGAGAAAAAGTACACGGCAC+TGG - Chr8:82134824-82134843 MsG0880047116.01.T01:intron 45.0%
! GCTTTAAGTCCAATTAGGGC+TGG + Chr8:82133578-82133597 None:intergenic 45.0%
! GTTCGTGGTTTTCAGCATGA+TGG - Chr8:82134159-82134178 MsG0880047116.01.T01:intron 45.0%
! TGTTATTGGGCGTGTCATTG+AGG - Chr8:82130401-82130420 MsG0880047116.01.T01:CDS 45.0%
! TGTTCTGGTTGCCGAAAAAG+AGG - Chr8:82134998-82135017 MsG0880047116.01.T01:intron 45.0%
! TTGACCTTGTTTCATCCTGG+AGG - Chr8:82130841-82130860 MsG0880047116.01.T01:intron 45.0%
!! GTTCTAGAGCCTTCTGTAGA+CGG + Chr8:82129996-82130015 None:intergenic 45.0%
!! TGAAGCATCGGAATTGACCT+TGG + Chr8:82130037-82130056 None:intergenic 45.0%
!!! CCTATTTTTACCCCGGCAAA+GGG + Chr8:82135096-82135115 None:intergenic 45.0%
!!! TCCTATTTTTACCCCGGCAA+AGG + Chr8:82135097-82135116 None:intergenic 45.0%
AAACCACGAACTTCAGCCTG+TGG + Chr8:82134150-82134169 None:intergenic 50.0%
ACACCGTCTTCATGGTTGAC+GGG + Chr8:82130081-82130100 None:intergenic 50.0%
ACATGTGCCACATCGGAAGT+AGG - Chr8:82133103-82133122 MsG0880047116.01.T01:intron 50.0%
ACCTGCGAACACACACAGAA+CGG + Chr8:82131361-82131380 None:intergenic 50.0%
ACGGTTCTGCCATCTTTACG+AGG + Chr8:82132810-82132829 None:intergenic 50.0%
AGGCATGAAGCTTGCAGAAG+AGG + Chr8:82131537-82131556 None:intergenic 50.0%
CCATGAAGACGGTGTACTCA+AGG - Chr8:82130086-82130105 MsG0880047116.01.T01:three_prime_UTR 50.0%
CCCTTTGCCGGGGTAAAAAT+AGG - Chr8:82135093-82135112 MsG0880047116.01.T01:CDS 50.0%
CCTCGAATCTCTCTCTTCCA+AGG - Chr8:82130017-82130036 MsG0880047116.01.T01:three_prime_UTR 50.0%
CCTGAAAAGCAAGGTGGCAA+CGG + Chr8:82135268-82135287 None:intergenic 50.0%
CCTTGAGTACACCGTCTTCA+TGG + Chr8:82130089-82130108 None:intergenic 50.0%
CCTTGGAAGAGAGAGATTCG+AGG + Chr8:82130020-82130039 None:intergenic 50.0%
CGGTGGCTTAGTTCAATCGA+TGG + Chr8:82129912-82129931 None:intergenic 50.0%
GAAGTGGTGATAGCACCTAC+GGG - Chr8:82131181-82131200 MsG0880047116.01.T01:intron 50.0%
GAAGTTGTTGCCACTCTCTG+TGG - Chr8:82130135-82130154 MsG0880047116.01.T01:three_prime_UTR 50.0%
GCAAGATTCCTGGAATCAGG+GGG - Chr8:82134424-82134443 MsG0880047116.01.T01:intron 50.0%
GGCAACCAGAACACAGAACT+CGG + Chr8:82134991-82135010 None:intergenic 50.0%
GGCATGAAGCTTGCAGAAGA+GGG + Chr8:82131536-82131555 None:intergenic 50.0%
GGCTATGGTGACTGAAGCAT+CGG + Chr8:82130049-82130068 None:intergenic 50.0%
GGCTCATTTCCAGCCCTAAT+TGG - Chr8:82133566-82133585 MsG0880047116.01.T01:intron 50.0%
GTCACTCCTGAAAAGCAAGG+TGG + Chr8:82135274-82135293 None:intergenic 50.0%
GTCGGTTACATAACGGTAGC+CGG - Chr8:82134298-82134317 MsG0880047116.01.T01:intron 50.0%
GTCTTCATGGTTGACGGGAA+TGG + Chr8:82130076-82130095 None:intergenic 50.0%
GTTAAAGCTCTTGCACCTGC+GGG - Chr8:82135211-82135230 MsG0880047116.01.T01:CDS 50.0%
TGAACTCGTGAAGACGTGTC+TGG + Chr8:82130291-82130310 None:intergenic 50.0%
TGGGCCAAACAAGAACTGGT+AGG - Chr8:82133336-82133355 MsG0880047116.01.T01:intron 50.0%
TGGTTCCGAGTTCTGTGTTC+TGG - Chr8:82134983-82135002 MsG0880047116.01.T01:intron 50.0%
TTAAAGCTCTTGCACCTGCG+GGG - Chr8:82135212-82135231 MsG0880047116.01.T01:CDS 50.0%
! GAACATGCCTGATGGTGTAC+AGG - Chr8:82130581-82130600 MsG0880047116.01.T01:CDS 50.0%
! TGTAGGTTGCTCAGAAGCGT+TGG - Chr8:82130508-82130527 MsG0880047116.01.T01:CDS 50.0%
! TTAAGGTCTGGGGCAGTGTT+TGG - Chr8:82133298-82133317 MsG0880047116.01.T01:intron 50.0%
!! GAAGTTGATGTCTTCGGGCA+TGG - Chr8:82132682-82132701 MsG0880047116.01.T01:intron 50.0%
!! GGTGTCACTCCTGAAAAGCA+AGG + Chr8:82135277-82135296 None:intergenic 50.0%
!! TGCTCAGAAGCGTTGGAGAT+TGG - Chr8:82130515-82130534 MsG0880047116.01.T01:CDS 50.0%
ATGTCCGCGCTTTACGCTCA+AGG - Chr8:82130187-82130206 MsG0880047116.01.T01:three_prime_UTR 55.0%
CTTTCCACTGCTAGAGGCGA+AGG - Chr8:82133992-82134011 MsG0880047116.01.T01:intron 55.0%
GACGGGAATGGAATCGGCTA+TGG + Chr8:82130064-82130083 None:intergenic 55.0%
GACGGTGTACTCAAGGGACA+CGG - Chr8:82130093-82130112 MsG0880047116.01.T01:three_prime_UTR 55.0%
GGAGTGGGTACTCGTACTCA+TGG - Chr8:82132857-82132876 MsG0880047116.01.T01:intron 55.0%
GGTCTGGGCCAAACAAGAAC+TGG - Chr8:82133332-82133351 MsG0880047116.01.T01:intron 55.0%
GTGTGTTCGCAGGTCGTAGT+GGG - Chr8:82131367-82131386 MsG0880047116.01.T01:intron 55.0%
TAGGCTCTCTGGCGTGTTTC+TGG - Chr8:82132565-82132584 MsG0880047116.01.T01:intron 55.0%
TGTCCACAGGCTGAAGTTCG+TGG - Chr8:82134144-82134163 MsG0880047116.01.T01:intron 55.0%
TGTGTGTTCGCAGGTCGTAG+TGG - Chr8:82131366-82131385 MsG0880047116.01.T01:intron 55.0%
!! CCGTTGCCACCTTGCTTTTC+AGG - Chr8:82135265-82135284 MsG0880047116.01.T01:CDS 55.0%
!! CGAGCTTCTTGAAGGCATCC+TGG + Chr8:82132162-82132181 None:intergenic 55.0%
AACTTCGCCCTCGAGGTCAG+CGG + Chr8:82130121-82130140 None:intergenic 60.0%
AATCCCTCTCATGGCGGTGG+CGG + Chr8:82129944-82129963 None:intergenic 60.0%
ACGTGTCTGGTGTCCGACAC+TGG + Chr8:82130278-82130297 None:intergenic 60.0%
ATAGCAGTGGTTCGCGGCTC+CGG - Chr8:82131268-82131287 MsG0880047116.01.T01:intron 60.0%
CTGAATCCCTCTCATGGCGG+TGG + Chr8:82129947-82129966 None:intergenic 60.0%
CTGTCCTTCGCCTCTAGCAG+TGG + Chr8:82133999-82134018 None:intergenic 60.0%
GCCGTTCTGTGTGTGTTCGC+AGG - Chr8:82131357-82131376 MsG0880047116.01.T01:intron 60.0%
TGCACCAAACCACACCACCG+CGG + Chr8:82131319-82131338 None:intergenic 60.0%
TGGCAACAACTTCGCCCTCG+AGG + Chr8:82130128-82130147 None:intergenic 60.0%
TTCATCCCACATCTCCCCGC+AGG + Chr8:82135229-82135248 None:intergenic 60.0%
TTGCACCTGCGGGGAGATGT+GGG - Chr8:82135221-82135240 MsG0880047116.01.T01:CDS 60.0%
ACACGGAACCGCTGACCTCG+AGG - Chr8:82130110-82130129 MsG0880047116.01.T01:three_prime_UTR 65.0%
CACGGAACCGCTGACCTCGA+GGG - Chr8:82130111-82130130 MsG0880047116.01.T01:three_prime_UTR 65.0%
CTCGACGACGCCACAGAGAG+TGG + Chr8:82130148-82130167 None:intergenic 65.0%
CTTGCACCTGCGGGGAGATG+TGG - Chr8:82135220-82135239 MsG0880047116.01.T01:CDS 65.0%
CCACCGCCACCGCCATGAGA+GGG - Chr8:82129938-82129957 MsG0880047116.01.T01:three_prime_UTR 70.0%
CTGGCCGCGGTGGTGTGGTT+TGG - Chr8:82131312-82131331 MsG0880047116.01.T01:intron 70.0%
! TCTCATGGCGGTGGCGGTGG+CGG + Chr8:82129938-82129957 None:intergenic 70.0%
ATGCTCCGGCGCGATCGCGC+CGG + Chr8:82131290-82131309 None:intergenic 75.0%
CACCGCGGCCAGCCATGCTC+CGG + Chr8:82131304-82131323 None:intergenic 75.0%
CGATCGCGCCGGAGCATGGC+TGG - Chr8:82131293-82131312 MsG0880047116.01.T01:intron 75.0%
GCCACCGCCACCGCCATGAG+AGG - Chr8:82129937-82129956 MsG0880047116.01.T01:three_prime_UTR 75.0%
! CATGGCTGGCCGCGGTGGTG+TGG - Chr8:82131307-82131326 MsG0880047116.01.T01:intron 75.0%
! CCCTCTCATGGCGGTGGCGG+TGG + Chr8:82129941-82129960 None:intergenic 75.0%
! GGCGCGATCGCGCCGGAGCA+TGG - Chr8:82131289-82131308 MsG0880047116.01.T01:intron 80.0%
!! CATGGCGGTGGCGGTGGCGG+TGG + Chr8:82129935-82129954 None:intergenic 80.0%
!! CGCCGGAGCATGGCTGGCCG+CGG - Chr8:82131299-82131318 MsG0880047116.01.T01:intron 80.0%
!! CGGAGCATGGCTGGCCGCGG+TGG - Chr8:82131302-82131321 MsG0880047116.01.T01:intron 80.0%
! CGGCTCCGGCGCGATCGCGC+CGG - Chr8:82131282-82131301 MsG0880047116.01.T01:intron 85.0%
!! GGCGGTGGCGGTGGCGGTGG+CGG + Chr8:82129926-82129945 None:intergenic 85.0%
!! GGTGGCGGTGGCGGTGGCGG+TGG + Chr8:82129929-82129948 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr8 gene 82129800 82135486 82129800 ID=MsG0880047116.01;Name=MsG0880047116.01
Chr8 mRNA 82129800 82135486 82129800 ID=MsG0880047116.01.T01;Parent=MsG0880047116.01;Name=MsG0880047116.01.T01;_AED=0.50;_eAED=0.52;_QI=131|0.75|0.8|1|0.75|0.6|5|431|300
Chr8 exon 82129800 82130689 82129800 ID=MsG0880047116.01.T01:exon:35223;Parent=MsG0880047116.01.T01
Chr8 exon 82134633 82134773 82134633 ID=MsG0880047116.01.T01:exon:35222;Parent=MsG0880047116.01.T01
Chr8 exon 82134864 82134909 82134864 ID=MsG0880047116.01.T01:exon:35221;Parent=MsG0880047116.01.T01
Chr8 exon 82135078 82135344 82135078 ID=MsG0880047116.01.T01:exon:35220;Parent=MsG0880047116.01.T01
Chr8 exon 82135366 82135486 82135366 ID=MsG0880047116.01.T01:exon:35219;Parent=MsG0880047116.01.T01
Chr8 five_prime_UTR 82135366 82135486 82135366 ID=MsG0880047116.01.T01:five_prime_utr;Parent=MsG0880047116.01.T01
Chr8 five_prime_UTR 82135335 82135344 82135335 ID=MsG0880047116.01.T01:five_prime_utr;Parent=MsG0880047116.01.T01
Chr8 CDS 82135078 82135334 82135078 ID=MsG0880047116.01.T01:cds;Parent=MsG0880047116.01.T01
Chr8 CDS 82134864 82134909 82134864 ID=MsG0880047116.01.T01:cds;Parent=MsG0880047116.01.T01
Chr8 CDS 82134633 82134773 82134633 ID=MsG0880047116.01.T01:cds;Parent=MsG0880047116.01.T01
Chr8 CDS 82130231 82130689 82130231 ID=MsG0880047116.01.T01:cds;Parent=MsG0880047116.01.T01
Chr8 three_prime_UTR 82129800 82130230 82129800 ID=MsG0880047116.01.T01:three_prime_utr;Parent=MsG0880047116.01.T01
Gene Sequence

>MsG0880047116.01.T01

ATGAGAGGGATTCAGTTACAGTTGAGTCAAACTCAGAAACTCCGTCTACAGAAGGCTCTAGAACACCTCGAATCTCTCTCTTCCAAGGTCAATTCCGATGCTTCAGTCACCATAGCCGATTCCATTCCCGTCAACCATGAAGACGGTGTACTCAAGGGACACGGAACCGCTGACCTCGAGGGCGAAGTTGTTGCCACTCTCTGTGGCGTCGTCGAGCGTGTTAACAAGCTCGTTTATGTCCGCGCTTTACGCTCAAGGTACAAACCTGAGGTTGGTGACATTGTTATTGGGCGTGTCATTGAGGTTGCTCAGAAGCGTTGGAGATTGGATATTAATTACAGTCAAAACGCTTATTTGATGCTTTCTGCTATGAACATGCCTGATGGTGTACAGGTATTTTGCAATTTCCCTTATGGAGATATCTTGTTTTTTGTTCTGCAATCGCTTAGTACTGGTCAATTGCTTACAGTCACACCATATTTAGCGAAGAGGCAGAAACAACATTTCCATCATATAGAGCAGTACGGTATTGATTTAATAATTGGCTGTAATGGGTTCATATGGGTTGGGGAACATGTTGAAGTCAGAGATGACATGGTAGAAGATCAAGTGAACCAATCTGATCCACAGGTTTTAACTCCCAATAAAAATTCTGTGAGTCTTGAAGAACAAGAGAAAAAGTACACGGCACTGGAGACAAGAAAGTACATATGCAGGGCTGCTAATGCTGTTAGAGTATTATCTACTTTAGGATTCATTATAACATCGGAAATCATCAAGGGAGTTATTGATCTCAGCCTTTCTGCGAATCTTGATATACACGACATGCTTGGTTCCGAGTTCTGTGTTCTGGTTGCCGAAAAAGAGGCTGAAAGGAGAAGCTCAAATAAAAAGAAGCGGTAG

Protein sequence

>MsG0880047116.01.T01

MRGIQLQLSQTQKLRLQKALEHLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTADLEGEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVIEVAQKRWRLDINYSQNAYLMLSAMNMPDGVQVFCNFPYGDILFFVLQSLSTGQLLTVTPYLAKRQKQHFHHIEQYGIDLIIGCNGFIWVGEHVEVRDDMVEDQVNQSDPQVLTPNKNSVSLEEQEKKYTALETRKYICRAANAVRVLSTLGFIITSEIIKGVIDLSLSANLDIHDMLGSEFCVLVAEKEAERRSSNKKKR*