AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009140.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009140.01.T01 MTR_2g054920 99.713 348 1 0 1 348 1 348 0.0 718
MsG0280009140.01.T01 MTR_7g081695 83.621 232 22 2 100 316 514 744 2.06e-132 396
MsG0280009140.01.T01 MTR_2g087640 30.841 321 190 8 9 301 3 319 3.72e-38 139
MsG0280009140.01.T01 MTR_1g072140 25.685 292 203 9 15 297 26 312 3.25e-18 84.3
MsG0280009140.01.T01 MTR_8g092620 26.087 276 193 8 30 299 29 299 1.62e-16 79.3
MsG0280009140.01.T01 MTR_4g119620 23.567 314 213 10 4 297 15 321 7.70e-15 74.7
MsG0280009140.01.T01 MTR_7g086360 26.000 300 160 9 10 296 92 342 8.54e-14 72.0
MsG0280009140.01.T01 MTR_8g092620 25.735 272 191 8 30 295 36 302 9.28e-14 71.6
MsG0280009140.01.T01 MTR_6g004040 28.042 189 130 6 112 297 27 212 1.95e-13 72.0
MsG0280009140.01.T01 MTR_3g449990 23.711 291 201 9 21 297 272 555 3.05e-13 71.2
MsG0280009140.01.T01 MTR_3g116500 25.843 267 174 8 56 299 60 325 1.31e-12 68.6
MsG0280009140.01.T01 MTR_5g022690 28.571 203 138 5 14 213 277 475 1.90e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009140.01.T01 AT3G15610 79.710 345 62 1 1 345 1 337 0.0 567
MsG0280009140.01.T01 AT1G52730 80.000 345 63 1 1 345 1 339 0.0 564
MsG0280009140.01.T01 AT1G52730 80.000 345 63 1 1 345 1 339 0.0 564
MsG0280009140.01.T01 AT1G15470 76.807 332 71 1 9 340 4 329 0.0 543
MsG0280009140.01.T01 AT1G52730 86.364 264 36 0 1 264 1 264 2.04e-168 470
MsG0280009140.01.T01 AT1G15470 83.137 255 43 0 9 263 4 258 1.16e-162 456
MsG0280009140.01.T01 AT2G46290 29.448 326 180 8 9 296 30 343 2.35e-39 143
MsG0280009140.01.T01 AT2G46280 30.189 318 188 8 9 296 3 316 2.76e-34 129
MsG0280009140.01.T01 AT2G46280 30.189 318 188 8 9 296 3 316 2.76e-34 129
MsG0280009140.01.T01 AT2G46280 30.488 246 150 7 9 237 3 244 7.00e-22 93.6
MsG0280009140.01.T01 AT3G49660 26.441 295 200 8 15 297 23 312 5.08e-21 92.4
MsG0280009140.01.T01 AT4G02730 30.078 256 161 12 54 297 36 285 6.14e-17 81.3
MsG0280009140.01.T01 AT4G02730 26.165 279 194 10 30 298 54 330 2.08e-15 76.6
MsG0280009140.01.T01 AT5G08560 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
MsG0280009140.01.T01 AT5G08560 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
MsG0280009140.01.T01 AT5G08560 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
MsG0280009140.01.T01 AT5G64730 22.993 274 202 7 30 298 29 298 1.38e-13 70.9
MsG0280009140.01.T01 AT2G43770 24.503 302 205 12 10 296 47 340 2.67e-13 70.5
MsG0280009140.01.T01 AT2G01330 23.167 341 197 12 15 297 187 520 1.74e-12 68.9
MsG0280009140.01.T01 AT1G71840 26.718 262 174 11 49 297 58 314 4.39e-12 67.4
MsG0280009140.01.T01 AT3G18130 24.068 295 185 9 14 300 61 324 7.09e-12 66.2
MsG0280009140.01.T01 AT1G48630 24.407 295 184 9 14 300 61 324 2.75e-11 64.3
MsG0280009140.01.T01 AT5G23430 26.984 189 132 6 112 297 27 212 8.20e-11 63.9
MsG0280009140.01.T01 AT5G23430 26.984 189 132 6 112 297 27 212 8.65e-11 63.9
MsG0280009140.01.T01 AT5G23430 26.984 189 132 6 112 297 27 212 8.65e-11 63.9

Find 137 sgRNAs with CRISPR-Local

Find 474 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAAAGCTCTGGAAATTT+TGG 0.049365 2:+46234211 None:intergenic
GTTCAAATATCATGCTAAAA+TGG 0.151511 2:+46228196 None:intergenic
AGTGTTGTTGTTGTTCCTTT+AGG 0.221378 2:-46234132 MsG0280009140.01.T01:five_prime_UTR
CTCTTCCTTTCCTTTGGACT+TGG 0.240542 2:+46228274 None:intergenic
GGAAAACAATGGCAAGAAAA+AGG 0.241394 2:+46228218 None:intergenic
ATGGTTCTACTGTCAAGTTT+TGG 0.261085 2:-46229265 MsG0280009140.01.T01:CDS
GTGTTGTTGTTGTTCCTTTA+GGG 0.269087 2:-46234131 MsG0280009140.01.T01:five_prime_UTR
CCCCGCCTCTTCCTTTCCTT+TGG 0.282864 2:+46228268 None:intergenic
ATTGAGTTCATGTACTGATA+TGG 0.286538 2:-46229547 MsG0280009140.01.T01:CDS
GGGGATTTATCCACTTCTTT+AGG 0.292998 2:+46229615 None:intergenic
TTTCCAGAGCTTTGAGGGTT+AGG 0.323955 2:-46234205 MsG0280009140.01.T01:five_prime_UTR
GGTTTGTGTGCAGCAAAGTT+TGG 0.345909 2:-46230390 MsG0280009140.01.T01:intron
AACAAACTTGTTACCAAACT+TGG 0.348142 2:+46229088 None:intergenic
GGTAAATTAGAACGATAAAA+TGG 0.350011 2:+46234301 None:intergenic
TCAGGGAGTTTGTGGGATAC+TGG 0.354569 2:-46228052 MsG0280009140.01.T01:three_prime_UTR
GAGAGGAAGGGCCAGGGCGC+AGG 0.355400 2:+46234364 None:intergenic
CACTGTGTCCGGTTCTCTCC+TGG 0.356259 2:-46228473 MsG0280009140.01.T01:CDS
AAAGTTTGGGATGCATTAAC+AGG 0.357474 2:-46230376 MsG0280009140.01.T01:CDS
TGCTGTTTGGAGTTGTTGTT+TGG 0.358064 2:-46233656 MsG0280009140.01.T01:CDS
GAGCTGGGAGAGGAAGGGCC+AGG 0.366606 2:+46234357 None:intergenic
AAGAAACCATCAGGAGTAAC+AGG 0.368685 2:+46233976 None:intergenic
CAAAATTTCCAGAGCTTTGA+GGG 0.370100 2:-46234210 MsG0280009140.01.T01:five_prime_UTR
TAGCATGATATTTGAACCTT+GGG 0.370757 2:-46228190 MsG0280009140.01.T01:three_prime_UTR
TTTGGTAACAAGTTTGTTGC+TGG 0.381118 2:-46229083 MsG0280009140.01.T01:CDS
GCCGATTCAAATCATAAATT+CGG 0.388321 2:+46229649 None:intergenic
GTTTGTGTGCAGCAAAGTTT+GGG 0.396138 2:-46230389 MsG0280009140.01.T01:intron
TTCAAATATCATGCTAAAAT+GGG 0.407848 2:+46228197 None:intergenic
GCTTCGTTAGAGCCCAAGTT+TGG 0.408433 2:-46229101 MsG0280009140.01.T01:CDS
AAGGGCATAAAGGTGCTGTT+TGG 0.408519 2:-46233669 MsG0280009140.01.T01:CDS
GGAACATTTGAAGGGCATAA+AGG 0.410447 2:-46233679 MsG0280009140.01.T01:CDS
AGGATGGAACCATCAGAATA+TGG 0.410704 2:-46228424 MsG0280009140.01.T01:CDS
TACAGTCCTGTTACTCCTGA+TGG 0.412838 2:-46233982 MsG0280009140.01.T01:CDS
ATGAATTGACGAGCTGGTTA+AGG 0.413167 2:-46228103 MsG0280009140.01.T01:three_prime_UTR
AAGGGCCAGGGCGCAGGGAT+TGG 0.419389 2:+46234370 None:intergenic
CCAAAATTTCCAGAGCTTTG+AGG 0.419724 2:-46234211 MsG0280009140.01.T01:five_prime_UTR
TCCGAATTTATGATTTGAAT+CGG 0.420073 2:-46229650 MsG0280009140.01.T01:CDS
ATACTAATCATGTATATTAG+AGG 0.421571 2:+46228166 None:intergenic
GATTGGATTGGAACATTTGA+AGG 0.427455 2:-46233688 MsG0280009140.01.T01:CDS
TTCCATACGGGCGATGAGAT+TGG 0.430232 2:-46229029 MsG0280009140.01.T01:intron
GCGACTTGGTGTCAAGTGTC+TGG 0.437902 2:+46229339 None:intergenic
GAGGTTTCGCGCAGGATTGA+GGG 0.446305 2:-46228317 MsG0280009140.01.T01:CDS
GACTAGTGCTGAAGTGAGTC+AGG 0.452988 2:-46229312 MsG0280009140.01.T01:CDS
TATTCTGATGGTTCCATCCT+CGG 0.456186 2:+46228427 None:intergenic
GTATAAGAGAGCAGGTCATA+AGG 0.467876 2:-46234397 MsG0280009140.01.T01:five_prime_UTR
TTAGCATGATATTTGAACCT+TGG 0.468326 2:-46228191 MsG0280009140.01.T01:three_prime_UTR
GCAACACTCCTGACTGAACC+AGG 0.469039 2:+46229594 None:intergenic
ACTTCTTTAGGAGGTGCATC+AGG 0.470919 2:+46229627 None:intergenic
GAAGGCAAATGCAGAGGAGG+AGG 0.475882 2:-46228336 MsG0280009140.01.T01:CDS
GGAATGGAGAGACTGGAGAT+TGG 0.482165 2:-46233705 MsG0280009140.01.T01:CDS
AGAGGAAGGGCCAGGGCGCA+GGG 0.482324 2:+46234365 None:intergenic
AACACAGAGCTGGGAGAGGA+AGG 0.483612 2:+46234351 None:intergenic
GGAGGAGAATCGTATGCATC+AGG 0.485943 2:-46228452 MsG0280009140.01.T01:CDS
GGAGGTTTCGCGCAGGATTG+AGG 0.486264 2:-46228318 MsG0280009140.01.T01:CDS
CTAATAAGAAAGAAACCATC+AGG 0.486855 2:+46233967 None:intergenic
TTGAGTTCATGTACTGATAT+GGG 0.489256 2:-46229546 MsG0280009140.01.T01:CDS
TTTAATTTCAGGGAGTTTGT+GGG 0.489273 2:-46228059 MsG0280009140.01.T01:three_prime_UTR
TTGGTAACAAGTTTGTTGCT+GGG 0.489658 2:-46229082 MsG0280009140.01.T01:CDS
GATGCATACGATTCTCCTCC+AGG 0.490054 2:+46228455 None:intergenic
AGCTGGGAGAGGAAGGGCCA+GGG 0.492838 2:+46234358 None:intergenic
ATTCTCCTCCAGGAGAGAAC+CGG 0.492972 2:+46228465 None:intergenic
ACCAAATGGAACCCTGGAAA+AGG 0.496038 2:-46228360 MsG0280009140.01.T01:CDS
CCTCCTAACCCTCAAAGCTC+TGG 0.501548 2:+46234202 None:intergenic
CTCACTTCAGCACTAGTCAT+AGG 0.502533 2:+46229317 None:intergenic
TCAGAGGGTTTATCACCAAA+TGG 0.504610 2:-46228374 MsG0280009140.01.T01:CDS
TACATGAACTCAATATAGTC+TGG 0.504684 2:+46229556 None:intergenic
CCCTGTCTGCCATATTCTGA+TGG 0.507125 2:+46228415 None:intergenic
ATGCTGAGGAATGGAGAGAC+TGG 0.507216 2:-46233712 MsG0280009140.01.T01:CDS
ACCATCAGAATATGGCAGAC+AGG 0.510525 2:-46228416 MsG0280009140.01.T01:CDS
ATGGTCCTGTACACTGTGTC+CGG 0.512630 2:-46228484 MsG0280009140.01.T01:CDS
AGGCTATGGGATGTAAGAAC+TGG 0.513301 2:-46229371 MsG0280009140.01.T01:CDS
GGGTAGAAGTAACACAGAGC+TGG 0.514465 2:+46234341 None:intergenic
TCTGATTCATCATGAGTCAA+TGG 0.518807 2:+46228392 None:intergenic
GTTCAGTCAGGAGTGTTGCA+TGG 0.523714 2:-46229590 MsG0280009140.01.T01:CDS
GTTGATAATTCACAGGCTAT+GGG 0.524204 2:-46229384 MsG0280009140.01.T01:intron
CCAGAGCTTTGAGGGTTAGG+AGG 0.524290 2:-46234202 MsG0280009140.01.T01:five_prime_UTR
GATTTATCCACTTCTTTAGG+AGG 0.527221 2:+46229618 None:intergenic
GGAGAGACTGGAGATTGGAT+TGG 0.528885 2:-46233700 MsG0280009140.01.T01:CDS
CAAGTCCAAAGGAAAGGAAG+AGG 0.530035 2:-46228273 MsG0280009140.01.T01:CDS
CGCTATATTACAACAGCTGA+TGG 0.532249 2:-46229284 MsG0280009140.01.T01:CDS
GCAAACCAATCCCTGCGCCC+TGG 0.535809 2:-46234375 MsG0280009140.01.T01:five_prime_UTR
TACCAATCTCATCGCCCGTA+TGG 0.543083 2:+46229027 None:intergenic
TCCAAAGGAAAGGAAGAGGC+GGG 0.544199 2:-46228269 MsG0280009140.01.T01:CDS
CTGTAAAAGAGATCAACAAC+TGG 0.548288 2:+46234000 None:intergenic
AAAGAAGTGGATAAATCCCC+TGG 0.551218 2:-46229612 MsG0280009140.01.T01:CDS
TACTAATCATGTATATTAGA+GGG 0.553998 2:+46228167 None:intergenic
GCATGCAACAAAGGACATCA+TGG 0.555607 2:-46228503 MsG0280009140.01.T01:CDS
CAAAGGAAAGGAAGAGGCGG+GGG 0.556170 2:-46228267 MsG0280009140.01.T01:CDS
CCATCAGAATATGGCAGACA+GGG 0.557804 2:-46228415 MsG0280009140.01.T01:CDS
ATAAATCCCCTGGTTCAGTC+AGG 0.558779 2:-46229602 MsG0280009140.01.T01:CDS
GAGAACCGGACACAGTGTAC+AGG 0.559046 2:+46228479 None:intergenic
GGAGGCCAAGTCCAAAGGAA+AGG 0.561592 2:-46228279 MsG0280009140.01.T01:CDS
ACAAACTTGTTACCAAACTT+GGG 0.561688 2:+46229089 None:intergenic
GGTAGAAGTAACACAGAGCT+GGG 0.562530 2:+46234342 None:intergenic
TAGTCACAGTATAAGAGAGC+AGG 0.563549 2:-46234405 None:intergenic
TTGATAGTATGCAACCCTAA+AGG 0.570800 2:+46234117 None:intergenic
GTACTGATATGGGAGGCGTC+AGG 0.570966 2:-46229536 MsG0280009140.01.T01:intron
AGCACTAGTCATAGGCGACT+TGG 0.571425 2:+46229325 None:intergenic
ACGGTACCTCTTGTTTGTCA+CGG 0.573426 2:-46234033 MsG0280009140.01.T01:CDS
ACACAGAGCTGGGAGAGGAA+GGG 0.576011 2:+46234352 None:intergenic
AAGTAACACAGAGCTGGGAG+AGG 0.579612 2:+46234347 None:intergenic
TGGTAACAAGTTTGTTGCTG+GGG 0.580435 2:-46229081 MsG0280009140.01.T01:CDS
CATGTATATTAGAGGGCCCA+AGG 0.588640 2:+46228174 None:intergenic
TGATGCACCTCCTAAAGAAG+TGG 0.589350 2:-46229625 MsG0280009140.01.T01:CDS
CATATAATGAATTGACGAGC+TGG 0.589827 2:-46228109 MsG0280009140.01.T01:three_prime_UTR
GGAGAAGGCAAATGCAGAGG+AGG 0.590265 2:-46228339 MsG0280009140.01.T01:CDS
GTCCAAAGGAAAGGAAGAGG+CGG 0.595374 2:-46228270 MsG0280009140.01.T01:CDS
ATTGGATTGGAACATTTGAA+GGG 0.596088 2:-46233687 MsG0280009140.01.T01:CDS
GCTAGTCCTATGCTGAGGAA+TGG 0.597073 2:-46233721 MsG0280009140.01.T01:CDS
GGTAACAAGTTTGTTGCTGG+GGG 0.598590 2:-46229080 MsG0280009140.01.T01:CDS
GAAGCTGATTCCACATTGCA+AGG 0.600142 2:+46229119 None:intergenic
GCAGAGGAGGCCAAGTCCAA+AGG 0.602036 2:-46228284 MsG0280009140.01.T01:CDS
TGGAACCCTGGAAAAGGAGA+AGG 0.603332 2:-46228354 MsG0280009140.01.T01:CDS
GTGATGGCAGCATGCAACAA+AGG 0.603771 2:-46228512 MsG0280009140.01.T01:intron
TATGCATCAGGATCCGAGGA+TGG 0.610567 2:-46228440 MsG0280009140.01.T01:CDS
CAACACTCCTGACTGAACCA+GGG 0.615920 2:+46229595 None:intergenic
TTTATCACCAAATGGAACCC+TGG 0.617473 2:-46228366 MsG0280009140.01.T01:CDS
ATTGACTCATGATGAATCAG+AGG 0.620794 2:-46228390 MsG0280009140.01.T01:CDS
ATGCTAAAATGGGAAAACAA+TGG 0.621825 2:+46228207 None:intergenic
GTCTCTCCATTCCTCAGCAT+AGG 0.627751 2:+46233715 None:intergenic
TTGACTCATGATGAATCAGA+GGG 0.630585 2:-46228389 MsG0280009140.01.T01:CDS
CCAAAGGAAAGGAAGAGGCG+GGG 0.631518 2:-46228268 MsG0280009140.01.T01:CDS
TTTCTTATTAGCGCAAGCAA+AGG 0.633591 2:-46233955 MsG0280009140.01.T01:intron
ATCGTATGCATCAGGATCCG+AGG 0.634906 2:-46228444 MsG0280009140.01.T01:CDS
AGGAACAACAACAACACTAA+CGG 0.635692 2:+46234137 None:intergenic
AGTGCTGAAGTGAGTCAGGA+TGG 0.642357 2:-46229308 MsG0280009140.01.T01:CDS
CAGAGGAGGAGGTTTCGCGC+AGG 0.644543 2:-46228325 MsG0280009140.01.T01:CDS
GAGTGACCGTGACAAACAAG+AGG 0.644753 2:+46234027 None:intergenic
AACACTCCTGACTGAACCAG+GGG 0.647227 2:+46229596 None:intergenic
AAAGGAGAAGGCAAATGCAG+AGG 0.668862 2:-46228342 MsG0280009140.01.T01:CDS
CTATGACATGCCTTGCAATG+TGG 0.670893 2:-46229129 MsG0280009140.01.T01:CDS
TGTGTCCGGTTCTCTCCTGG+AGG 0.681279 2:-46228470 MsG0280009140.01.T01:CDS
GTTACGAAAAGTAACACAGG+TGG 0.691010 2:+46234164 None:intergenic
TAGATGCTAGTCCTATGCTG+AGG 0.696428 2:-46233726 MsG0280009140.01.T01:CDS
TTACGAAAAGTAACACAGGT+GGG 0.698511 2:+46234165 None:intergenic
AGTTCATGTACTGATATGGG+AGG 0.705266 2:-46229543 MsG0280009140.01.T01:CDS
AACAACAACAACACTAACGG+CGG 0.709344 2:+46234140 None:intergenic
GGTGTTACGAAAAGTAACAC+AGG 0.721694 2:+46234161 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAACAAATATTATAAA+CGG + Chr2:46233577-46233596 None:intergenic 10.0%
!! ATATATATTCTGTTAAAATT+TGG - Chr2:46232601-46232620 MsG0280009140.01.T01:intron 10.0%
!! GTATATATTGATAAATATTA+CGG - Chr2:46233855-46233874 MsG0280009140.01.T01:intron 10.0%
!! TGTATATATTAAAAAATAGT+TGG + Chr2:46233738-46233757 None:intergenic 10.0%
!!! TATAAACTCAATTTTTAAAT+TGG - Chr2:46229179-46229198 MsG0280009140.01.T01:intron 10.0%
!! AAAACCTAAAAAAAAAAAAG+AGG + Chr2:46228125-46228144 None:intergenic 15.0%
!! AAACATTTCTTATAATAACT+GGG - Chr2:46231293-46231312 MsG0280009140.01.T01:intron 15.0%
!! AAACCTAAAAAAAAAAAAGA+GGG + Chr2:46228124-46228143 None:intergenic 15.0%
!! AAAGAATAAAATGTTAAATG+GGG + Chr2:46230116-46230135 None:intergenic 15.0%
!! ACAAAGAATAAAATGTTAAA+TGG + Chr2:46230118-46230137 None:intergenic 15.0%
!! ATGGTTAAAAAAGAAAAAAA+TGG + Chr2:46228084-46228103 None:intergenic 15.0%
!! CAAAGAATAAAATGTTAAAT+GGG + Chr2:46230117-46230136 None:intergenic 15.0%
!! TGGTTAAAAAAGAAAAAAAT+GGG + Chr2:46228083-46228102 None:intergenic 15.0%
!!! ATTTAATTTTGGAATTTTAG+TGG - Chr2:46228619-46228638 MsG0280009140.01.T01:intron 15.0%
!!! TGGTATTTATTTTCTATTTA+CGG + Chr2:46232220-46232239 None:intergenic 15.0%
!!! TTATGTTTGTTTTAATTTCA+GGG - Chr2:46234332-46234351 MsG0280009140.01.T01:five_prime_UTR 15.0%
!!! TTTATGTTTGTTTTAATTTC+AGG - Chr2:46234331-46234350 MsG0280009140.01.T01:five_prime_UTR 15.0%
!! AATGGAAAAGAAAAAAGTTA+CGG - Chr2:46228349-46228368 MsG0280009140.01.T01:CDS 20.0%
!! AATTCCATATAGGTAATAAT+AGG - Chr2:46233666-46233685 MsG0280009140.01.T01:CDS 20.0%
!! ACAAAGTGATTTAGATTAAA+TGG + Chr2:46230235-46230254 None:intergenic 20.0%
!! ATACTAATCATGTATATTAG+AGG + Chr2:46234238-46234257 None:intergenic 20.0%
!! ATTGATGTTTGTATATATCT+GGG - Chr2:46232683-46232702 MsG0280009140.01.T01:intron 20.0%
!! GAAACATTTCTTATAATAAC+TGG - Chr2:46231292-46231311 MsG0280009140.01.T01:intron 20.0%
!! TAAAATCCTCATATAGTATT+AGG + Chr2:46229215-46229234 None:intergenic 20.0%
!! TACTAATCATGTATATTAGA+GGG + Chr2:46234237-46234256 None:intergenic 20.0%
!! TTCAAATATCATGCTAAAAT+GGG + Chr2:46234207-46234226 None:intergenic 20.0%
!! TTCAGTTCTACAAAATTAAT+TGG - Chr2:46229913-46229932 MsG0280009140.01.T01:intron 20.0%
!!! AATTTTGTGTTTTTGTCATT+AGG + Chr2:46232190-46232209 None:intergenic 20.0%
!!! ACTAAACTGATTTTTAAGTT+TGG - Chr2:46233816-46233835 MsG0280009140.01.T01:intron 20.0%
!!! AGTCAATTCAATTTTTTCAA+TGG - Chr2:46231682-46231701 MsG0280009140.01.T01:intron 20.0%
!!! ATATTTGTTGGTATTCATTT+TGG - Chr2:46232148-46232167 MsG0280009140.01.T01:intron 20.0%
!!! ATTTTTAAATTGGTAAGAGT+TGG - Chr2:46229189-46229208 MsG0280009140.01.T01:intron 20.0%
!!! CTAAAAAACAGTAGATTTTA+AGG + Chr2:46230027-46230046 None:intergenic 20.0%
!!! CTTCTTTTACGTATTTAAAT+TGG + Chr2:46229115-46229134 None:intergenic 20.0%
!!! GGTATTTATTTTCTATTTAC+GGG + Chr2:46232219-46232238 None:intergenic 20.0%
!!! TAAGACAATAAACATTTTCA+CGG + Chr2:46228997-46229016 None:intergenic 20.0%
!!! TAATTTTGTAGAACTGAAAA+GGG + Chr2:46229911-46229930 None:intergenic 20.0%
!!! TACTAGTATTATCTTTGTTT+TGG - Chr2:46229836-46229855 MsG0280009140.01.T01:intron 20.0%
!!! TATCTCAAAATGTTTCATTT+TGG + Chr2:46229480-46229499 None:intergenic 20.0%
!!! TATTTAAATTGGACCTTTTT+GGG + Chr2:46229104-46229123 None:intergenic 20.0%
!!! TTAATTTTGTAGAACTGAAA+AGG + Chr2:46229912-46229931 None:intergenic 20.0%
!!! TTACCCTCTTTTTTTTTTTT+AGG - Chr2:46228118-46228137 MsG0280009140.01.T01:three_prime_UTR 20.0%
!!! TTACTAATTTTGTTTCCTTT+TGG - Chr2:46230158-46230177 MsG0280009140.01.T01:intron 20.0%
!!! TTGTAAGTTTTAGTTTGTAT+TGG - Chr2:46234268-46234287 MsG0280009140.01.T01:five_prime_UTR 20.0%
! AAACCTATAATGTAATGTGA+TGG + Chr2:46229428-46229447 None:intergenic 25.0%
! AAATCATATTTCCTATGTTC+TGG - Chr2:46233711-46233730 MsG0280009140.01.T01:CDS 25.0%
! AAATGGGGATTCATATTAAA+TGG + Chr2:46230101-46230120 None:intergenic 25.0%
! AACAAAAACAACAAGCAAAT+TGG + Chr2:46228165-46228184 None:intergenic 25.0%
! AATTAAATGTTATCACGTGT+CGG + Chr2:46228607-46228626 None:intergenic 25.0%
! ACAATAATGACTAAGCAATA+TGG + Chr2:46231766-46231785 None:intergenic 25.0%
! ACAGAGAATAAAATGTTAAC+TGG + Chr2:46230055-46230074 None:intergenic 25.0%
! AGAACATAGGAAATATGATT+TGG + Chr2:46233712-46233731 None:intergenic 25.0%
! AGATCCTATTATTACCTATA+TGG + Chr2:46233673-46233692 None:intergenic 25.0%
! AGGAATTCAATATTGAAAAG+TGG + Chr2:46231632-46231651 None:intergenic 25.0%
! ATAAAATGATGATCTTGGTT+AGG - Chr2:46231094-46231113 MsG0280009140.01.T01:intron 25.0%
! ATATACAAAAACGACAACAA+CGG + Chr2:46232926-46232945 None:intergenic 25.0%
! ATGAAAATACTATAATCGCT+TGG + Chr2:46232268-46232287 None:intergenic 25.0%
! ATTACAAAACAAGCTTATTC+TGG - Chr2:46232555-46232574 MsG0280009140.01.T01:intron 25.0%
! CAATATTGAATTCCTAAAAC+AGG - Chr2:46231637-46231656 MsG0280009140.01.T01:intron 25.0%
! CAATCAATTCATATGAACAA+AGG + Chr2:46232667-46232686 None:intergenic 25.0%
! CACACACATCTAATATAAAT+AGG - Chr2:46229070-46229089 MsG0280009140.01.T01:CDS 25.0%
! CATAACCTTAAAAAAGAACA+TGG + Chr2:46233196-46233215 None:intergenic 25.0%
! CTTGCAGATACAATTTAATA+GGG + Chr2:46232513-46232532 None:intergenic 25.0%
! GATTGATGTTTGTATATATC+TGG - Chr2:46232682-46232701 MsG0280009140.01.T01:intron 25.0%
! GCATAGTAATACTAGAATAA+GGG + Chr2:46229809-46229828 None:intergenic 25.0%
! GGTAAATTAGAACGATAAAA+TGG + Chr2:46228103-46228122 None:intergenic 25.0%
! GTAAGTAACAATAAGTTAGT+TGG - Chr2:46233170-46233189 MsG0280009140.01.T01:intron 25.0%
! GTTCAAATATCATGCTAAAA+TGG + Chr2:46234208-46234227 None:intergenic 25.0%
! TAAAATGATGATCTTGGTTA+GGG - Chr2:46231095-46231114 MsG0280009140.01.T01:intron 25.0%
! TAAGAGCAGAAAATGTTAAA+TGG + Chr2:46230206-46230225 None:intergenic 25.0%
! TACATTATTGACAGAAGAAA+GGG - Chr2:46230987-46231006 MsG0280009140.01.T01:intron 25.0%
! TCATGAGTGAATGTAAAAAA+GGG - Chr2:46231431-46231450 MsG0280009140.01.T01:intron 25.0%
! TCCGAATTTATGATTTGAAT+CGG - Chr2:46232751-46232770 MsG0280009140.01.T01:intron 25.0%
! TGAGATTTACAATTCTGATT+GGG + Chr2:46230621-46230640 None:intergenic 25.0%
! TGCATAGTAATACTAGAATA+AGG + Chr2:46229810-46229829 None:intergenic 25.0%
! TTAATTGAATGCTGTACTAA+TGG + Chr2:46231054-46231073 None:intergenic 25.0%
! TTACATTATTGACAGAAGAA+AGG - Chr2:46230986-46231005 MsG0280009140.01.T01:intron 25.0%
! TTAGTACAGCATTCAATTAA+TGG - Chr2:46231054-46231073 MsG0280009140.01.T01:intron 25.0%
! TTCATGAGTGAATGTAAAAA+AGG - Chr2:46231430-46231449 MsG0280009140.01.T01:intron 25.0%
! TTTATTGTCTTATGCTTTAC+CGG - Chr2:46229005-46229024 MsG0280009140.01.T01:intron 25.0%
! TTTGATATAAACATGAAGCT+TGG - Chr2:46232972-46232991 MsG0280009140.01.T01:intron 25.0%
! TTTGTTAATTCAATGTGCAT+AGG - Chr2:46228929-46228948 MsG0280009140.01.T01:intron 25.0%
!! AAGACAATAAACATTTTCAC+GGG + Chr2:46228996-46229015 None:intergenic 25.0%
!! AATTGTTAACTCGAAGATTT+TGG + Chr2:46229597-46229616 None:intergenic 25.0%
!! AATTTTGTAGAACTGAAAAG+GGG + Chr2:46229910-46229929 None:intergenic 25.0%
!! ATTGTTAACTCGAAGATTTT+GGG + Chr2:46229596-46229615 None:intergenic 25.0%
!! GAAAGCATAATAATCCTAAT+GGG + Chr2:46231714-46231733 None:intergenic 25.0%
!! GTATTTAAATTGGACCTTTT+TGG + Chr2:46229105-46229124 None:intergenic 25.0%
!! TAATAGATCTGATCAGTTTT+AGG - Chr2:46228520-46228539 MsG0280009140.01.T01:intron 25.0%
!! TAGGATCTAAAACCAAAATA+AGG - Chr2:46233685-46233704 MsG0280009140.01.T01:CDS 25.0%
!! TGAAAGCATAATAATCCTAA+TGG + Chr2:46231715-46231734 None:intergenic 25.0%
!! TTGTGAGATTTTACAAGAAA+TGG - Chr2:46228331-46228350 MsG0280009140.01.T01:CDS 25.0%
!!! AAGTAGTGAGGTTTTAAAAA+AGG - Chr2:46231149-46231168 MsG0280009140.01.T01:intron 25.0%
!!! ACTCGTAAATTTTTTGTCAT+TGG + Chr2:46229145-46229164 None:intergenic 25.0%
!!! AGTATTATCTTTGTTTTGGT+AGG - Chr2:46229840-46229859 MsG0280009140.01.T01:intron 25.0%
!!! ATATGATTTGGTCCTTATTT+TGG + Chr2:46233700-46233719 None:intergenic 25.0%
!!! CACGTGATAACATTTAATTT+TGG - Chr2:46228608-46228627 MsG0280009140.01.T01:intron 25.0%
!!! GAAGATTTTGGGATTTAAAT+TGG + Chr2:46229585-46229604 None:intergenic 25.0%
!!! TCATGTTTTTGATTTCCATA+CGG - Chr2:46233359-46233378 MsG0280009140.01.T01:intron 25.0%
!!! TTTATTTTCTATTTACGGGA+AGG + Chr2:46232215-46232234 None:intergenic 25.0%
AAAAAATTTACGAGTCCTTG+TGG - Chr2:46229150-46229169 MsG0280009140.01.T01:CDS 30.0%
AAAAATTTACGAGTCCTTGT+GGG - Chr2:46229151-46229170 MsG0280009140.01.T01:intron 30.0%
AAAATTGCATCAAATACACC+CGG + Chr2:46231238-46231257 None:intergenic 30.0%
AAAGAACACTATAATGCTTC+TGG - Chr2:46230721-46230740 MsG0280009140.01.T01:intron 30.0%
AAATATTACGGTGTTCTATC+TGG - Chr2:46233867-46233886 MsG0280009140.01.T01:intron 30.0%
AAATCATAAGTTCACAAGGT+TGG - Chr2:46230471-46230490 MsG0280009140.01.T01:intron 30.0%
AAATCTTGATTCTTTGAGCA+AGG - Chr2:46232421-46232440 MsG0280009140.01.T01:intron 30.0%
AACCTTGTGAACTTATGATT+TGG + Chr2:46230472-46230491 None:intergenic 30.0%
AATTGGAACTTTGATACCTA+TGG + Chr2:46229568-46229587 None:intergenic 30.0%
ATAATCGCTTGGTAAATTCT+AGG + Chr2:46232257-46232276 None:intergenic 30.0%
ATACTAGTTGAGAAGTCATT+TGG + Chr2:46231345-46231364 None:intergenic 30.0%
ATAGGAAAGTTAACCCAAAA+AGG - Chr2:46229088-46229107 MsG0280009140.01.T01:CDS 30.0%
ATATCAGAGTGTGATACTAA+AGG + Chr2:46231867-46231886 None:intergenic 30.0%
ATCAGAATTGTAAATCTCAC+CGG - Chr2:46230622-46230641 MsG0280009140.01.T01:intron 30.0%
ATCTGTCATAAGATCGAAAT+GGG + Chr2:46229990-46230009 None:intergenic 30.0%
ATGCTAAAATGGGAAAACAA+TGG + Chr2:46234197-46234216 None:intergenic 30.0%
ATTAATCCTTGCAATATCTG+TGG - Chr2:46233601-46233620 MsG0280009140.01.T01:intron 30.0%
CAATTCATATGAACAAAGGT+GGG + Chr2:46232663-46232682 None:intergenic 30.0%
CACTAAACATACTGAAAGAA+AGG + Chr2:46228838-46228857 None:intergenic 30.0%
CCAATAGCTGAATTCATTTA+TGG - Chr2:46232311-46232330 MsG0280009140.01.T01:intron 30.0%
CCATAAATGAATTCAGCTAT+TGG + Chr2:46232314-46232333 None:intergenic 30.0%
CTAATAAGAAAGAAACCATC+AGG + Chr2:46228437-46228456 None:intergenic 30.0%
GAAAACAATGGCAAGAAAAA+GGG + Chr2:46234185-46234204 None:intergenic 30.0%
GATGTTGTCAATCATCAAAA+AGG + Chr2:46233219-46233238 None:intergenic 30.0%
GATTAAATGCTGAATCCAAA+AGG + Chr2:46230176-46230195 None:intergenic 30.0%
GATTACTTGATCAATCCAAA+TGG + Chr2:46229275-46229294 None:intergenic 30.0%
GCTTGCAGATACAATTTAAT+AGG + Chr2:46232514-46232533 None:intergenic 30.0%
GTCAATTATGAATACGATCA+AGG + Chr2:46230450-46230469 None:intergenic 30.0%
GTGAGATTTACAATTCTGAT+TGG + Chr2:46230622-46230641 None:intergenic 30.0%
GTTCCATCACATTACATTAT+AGG - Chr2:46229422-46229441 MsG0280009140.01.T01:intron 30.0%
GTTGCATAAAATGATGATCT+TGG - Chr2:46231089-46231108 MsG0280009140.01.T01:intron 30.0%
TAAACTTGGGTAAAATCCAT+AGG - Chr2:46229549-46229568 MsG0280009140.01.T01:CDS 30.0%
TAATGACTAAGCAATATGGA+AGG + Chr2:46231762-46231781 None:intergenic 30.0%
TAATTTCTATGTGTCTAGTG+TGG + Chr2:46230914-46230933 None:intergenic 30.0%
TACATGAACTCAATATAGTC+TGG + Chr2:46232848-46232867 None:intergenic 30.0%
TAGCATGATATTTGAACCTT+GGG - Chr2:46234211-46234230 MsG0280009140.01.T01:five_prime_UTR 30.0%
TATAAGAAATGTTTCCACCA+CGG + Chr2:46231287-46231306 None:intergenic 30.0%
TATAGCGACTAATTCCATAT+AGG - Chr2:46233656-46233675 MsG0280009140.01.T01:CDS 30.0%
TCAATTCATATGAACAAAGG+TGG + Chr2:46232664-46232683 None:intergenic 30.0%
TCAGTAAAGAACAAAGTGAA+GGG + Chr2:46230300-46230319 None:intergenic 30.0%
TGCAAATTGTGAAAGAAACA+CGG + Chr2:46232122-46232141 None:intergenic 30.0%
TGTGGTATGCAATTATGTTT+GGG + Chr2:46230896-46230915 None:intergenic 30.0%
TTACCGTCATAAATGATATG+CGG - Chr2:46229232-46229251 MsG0280009140.01.T01:intron 30.0%
TTAGCATGATATTTGAACCT+TGG - Chr2:46234210-46234229 MsG0280009140.01.T01:five_prime_UTR 30.0%
TTCAATGGTTTAAACCCATT+AGG - Chr2:46231697-46231716 MsG0280009140.01.T01:intron 30.0%
TTCAGTAAAGAACAAAGTGA+AGG + Chr2:46230301-46230320 None:intergenic 30.0%
TTGGTAGATGAATTCAGTTA+TGG + Chr2:46232295-46232314 None:intergenic 30.0%
TTTAGTTATCAAAAGATGCC+AGG + Chr2:46233802-46233821 None:intergenic 30.0%
TTTGCATGACTGATATTTGT+TGG - Chr2:46232136-46232155 MsG0280009140.01.T01:intron 30.0%
! ATTGAGTTCATGTACTGATA+TGG - Chr2:46232854-46232873 MsG0280009140.01.T01:intron 30.0%
! ATTGGATTGGAACATTTGAA+GGG - Chr2:46228714-46228733 MsG0280009140.01.T01:intron 30.0%
! CAGAAATCAATTCCTGTTTT+AGG + Chr2:46231652-46231671 None:intergenic 30.0%
! GAAGCATTATAGTGTTCTTT+AGG + Chr2:46230721-46230740 None:intergenic 30.0%
! GCCGATTCAAATCATAAATT+CGG + Chr2:46232755-46232774 None:intergenic 30.0%
! GTTTGGTTTAATTCATTGTG+TGG - Chr2:46233833-46233852 MsG0280009140.01.T01:intron 30.0%
! TAAAGAACAAGGCATTAACA+AGG + Chr2:46232630-46232649 None:intergenic 30.0%
! TCATGCATTTTACATGTTTC+AGG + Chr2:46231380-46231399 None:intergenic 30.0%
! TGCAATTTTCTGCAATATCA+AGG - Chr2:46231249-46231268 MsG0280009140.01.T01:intron 30.0%
! TTGAGTTCATGTACTGATAT+GGG - Chr2:46232855-46232874 MsG0280009140.01.T01:intron 30.0%
! TTTAATTTCAGGGAGTTTGT+GGG - Chr2:46234342-46234361 MsG0280009140.01.T01:five_prime_UTR 30.0%
!! AACAAACTTGTTACCAAACT+TGG + Chr2:46233316-46233335 None:intergenic 30.0%
!! ACAAACTTGTTACCAAACTT+GGG + Chr2:46233315-46233334 None:intergenic 30.0%
!! ACATACTTGTTGTCTAAACT+TGG - Chr2:46229535-46229554 MsG0280009140.01.T01:intron 30.0%
!! CATACTTGTTGTCTAAACTT+GGG - Chr2:46229536-46229555 MsG0280009140.01.T01:intron 30.0%
!! GAATCTTGTTGATAATTCAC+AGG - Chr2:46233010-46233029 MsG0280009140.01.T01:intron 30.0%
!! TCGCTATATGTTTTGTTCTA+GGG + Chr2:46233644-46233663 None:intergenic 30.0%
!!! AATGCTTCTGATTGTTGTTT+TGG - Chr2:46233544-46233563 MsG0280009140.01.T01:intron 30.0%
!!! AGTGTCACTTACACTATTTT+TGG + Chr2:46229683-46229702 None:intergenic 30.0%
!!! CATGTTTTTGATTTCCATAC+GGG - Chr2:46233360-46233379 MsG0280009140.01.T01:intron 30.0%
!!! GCATTTTTTTCGATTTCTCA+AGG + Chr2:46233529-46233548 None:intergenic 30.0%
!!! GTGTCACTTACACTATTTTT+GGG + Chr2:46229682-46229701 None:intergenic 30.0%
!!! TATTTTTGGAGCAAAAAGAG+CGG + Chr2:46229744-46229763 None:intergenic 30.0%
!!! TGGTATTCATTTTGGTTGAT+CGG - Chr2:46232156-46232175 MsG0280009140.01.T01:intron 30.0%
!!! TTTTAATTTCAGGGAGTTTG+TGG - Chr2:46234341-46234360 MsG0280009140.01.T01:five_prime_UTR 30.0%
AAACAAAACTGCAGAAACTC+AGG - Chr2:46230500-46230519 MsG0280009140.01.T01:intron 35.0%
AAATAGTTGGTCCAGAACAT+AGG + Chr2:46233725-46233744 None:intergenic 35.0%
AACAAGATTCAGTGCAATAG+AGG + Chr2:46233000-46233019 None:intergenic 35.0%
AACACTATAATGCTTCTGGA+AGG - Chr2:46230725-46230744 MsG0280009140.01.T01:intron 35.0%
AATCCATAGCTGAAAATCAC+AGG + Chr2:46233243-46233262 None:intergenic 35.0%
AATCCCGATTTAGTGTAATG+GGG - Chr2:46229644-46229663 MsG0280009140.01.T01:CDS 35.0%
ACATCAAAAACCTAGACACT+GGG + Chr2:46231195-46231214 None:intergenic 35.0%
AGAATCCCGATTTAGTGTAA+TGG - Chr2:46229642-46229661 MsG0280009140.01.T01:CDS 35.0%
AGACTCTATGATAAGATGCA+TGG + Chr2:46229298-46229317 None:intergenic 35.0%
AGCCACTTGTAACATAACAT+GGG - Chr2:46230683-46230702 MsG0280009140.01.T01:intron 35.0%
AGGAACAACAACAACACTAA+CGG + Chr2:46228267-46228286 None:intergenic 35.0%
ATACTAAAGGACTAATGCAG+GGG + Chr2:46231854-46231873 None:intergenic 35.0%
ATGTTATGTTACAAGTGGCT+GGG + Chr2:46230683-46230702 None:intergenic 35.0%
ATTCTATGTGTGGTCTAGAT+TGG + Chr2:46229627-46229646 None:intergenic 35.0%
CAAAAGTCTACACAAACTCA+TGG + Chr2:46230418-46230437 None:intergenic 35.0%
CATATAATGAATTGACGAGC+TGG - Chr2:46234292-46234311 MsG0280009140.01.T01:five_prime_UTR 35.0%
CTGAGTTCATGATTGTAGAT+AGG + Chr2:46230789-46230808 None:intergenic 35.0%
CTGTAAAAGAGATCAACAAC+TGG + Chr2:46228404-46228423 None:intergenic 35.0%
GAATCCCGATTTAGTGTAAT+GGG - Chr2:46229643-46229662 MsG0280009140.01.T01:CDS 35.0%
GACCAAATCATAAGTTCACA+AGG - Chr2:46230467-46230486 MsG0280009140.01.T01:intron 35.0%
GACTCTATGATAAGATGCAT+GGG + Chr2:46229297-46229316 None:intergenic 35.0%
GAGTTTATAAATGACCCACA+AGG + Chr2:46229168-46229187 None:intergenic 35.0%
GATACTAAAGGACTAATGCA+GGG + Chr2:46231855-46231874 None:intergenic 35.0%
GATCTGTCATAAGATCGAAA+TGG + Chr2:46229991-46230010 None:intergenic 35.0%
GATTTATCCACTTCTTTAGG+AGG + Chr2:46232786-46232805 None:intergenic 35.0%
GCAAATTGTGAAAGAAACAC+GGG + Chr2:46232121-46232140 None:intergenic 35.0%
GGAAAACAATGGCAAGAAAA+AGG + Chr2:46234186-46234205 None:intergenic 35.0%
GTACAGCATTCAATTAATGG+TGG - Chr2:46231057-46231076 MsG0280009140.01.T01:intron 35.0%
GTATCCTCAGATAAAGAACA+AGG + Chr2:46232641-46232660 None:intergenic 35.0%
GTGTGGTATGCAATTATGTT+TGG + Chr2:46230897-46230916 None:intergenic 35.0%
TACTTGATCAATCCAAATGG+TGG + Chr2:46229272-46229291 None:intergenic 35.0%
TCTGATTCATCATGAGTCAA+TGG + Chr2:46234012-46234031 None:intergenic 35.0%
TCTGTCATAAGATCGAAATG+GGG + Chr2:46229989-46230008 None:intergenic 35.0%
TGAATATGCACTGTAATTCG+TGG + Chr2:46231405-46231424 None:intergenic 35.0%
TGATACTAAAGGACTAATGC+AGG + Chr2:46231856-46231875 None:intergenic 35.0%
TGGATAAGATCATTCGATCT+TGG - Chr2:46229933-46229952 MsG0280009140.01.T01:intron 35.0%
TTACGAAAAGTAACACAGGT+GGG + Chr2:46228239-46228258 None:intergenic 35.0%
TTATCATAGAGTCTCCATAC+TGG - Chr2:46229304-46229323 MsG0280009140.01.T01:CDS 35.0%
TTGACTCATGATGAATCAGA+GGG - Chr2:46234012-46234031 MsG0280009140.01.T01:CDS 35.0%
TTGGTAGGATCTTTCAATCT+TGG - Chr2:46229855-46229874 MsG0280009140.01.T01:intron 35.0%
TTTCTTATTAGCGCAAGCAA+AGG - Chr2:46228446-46228465 MsG0280009140.01.T01:CDS 35.0%
! AAAGTTTGGGATGCATTAAC+AGG - Chr2:46232025-46232044 MsG0280009140.01.T01:intron 35.0%
! AATGCCTTGTTCTTTATCTG+AGG - Chr2:46232634-46232653 MsG0280009140.01.T01:intron 35.0%
! AGTGTTGTTGTTGTTCCTTT+AGG - Chr2:46228269-46228288 MsG0280009140.01.T01:CDS 35.0%
! AGTTGGCCTAATACTATATG+AGG - Chr2:46229206-46229225 MsG0280009140.01.T01:intron 35.0%
! ATGTAATGTGATGGAACAGT+AGG + Chr2:46229419-46229438 None:intergenic 35.0%
! ATTGACTCATGATGAATCAG+AGG - Chr2:46234011-46234030 MsG0280009140.01.T01:CDS 35.0%
! CAAAATTTCCAGAGCTTTGA+GGG - Chr2:46228191-46228210 MsG0280009140.01.T01:three_prime_UTR 35.0%
! CACTATCTTTTTCCACCATT+TGG - Chr2:46229257-46229276 MsG0280009140.01.T01:CDS 35.0%
! GATTGGATTGGAACATTTGA+AGG - Chr2:46228713-46228732 MsG0280009140.01.T01:intron 35.0%
! GTGTTGTTGTTGTTCCTTTA+GGG - Chr2:46228270-46228289 MsG0280009140.01.T01:CDS 35.0%
! TAACTGACTCATGCTTTGTA+GGG + Chr2:46233498-46233517 None:intergenic 35.0%
! TGTGATTTTCAGCTATGGAT+TGG - Chr2:46233242-46233261 MsG0280009140.01.T01:intron 35.0%
! TTGATAGTATGCAACCCTAA+AGG + Chr2:46228287-46228306 None:intergenic 35.0%
! TTGTAATTTCTGGATGTGTC+CGG + Chr2:46230644-46230663 None:intergenic 35.0%
! TTGTACTGTAGTTGTCACTT+TGG - Chr2:46232373-46232392 MsG0280009140.01.T01:intron 35.0%
!! ATGGTTCTACTGTCAAGTTT+TGG - Chr2:46233136-46233155 MsG0280009140.01.T01:intron 35.0%
!! GGTATTTTCGAGGAAAAAAG+TGG + Chr2:46229788-46229807 None:intergenic 35.0%
!! GTCGCTATATGTTTTGTTCT+AGG + Chr2:46233645-46233664 None:intergenic 35.0%
!! GTTGATAATTCACAGGCTAT+GGG - Chr2:46233017-46233036 MsG0280009140.01.T01:intron 35.0%
!! TGGTTCTACTGTCAAGTTTT+GGG - Chr2:46233137-46233156 MsG0280009140.01.T01:intron 35.0%
!! TGTTGATAATTCACAGGCTA+TGG - Chr2:46233016-46233035 MsG0280009140.01.T01:intron 35.0%
!! TTGGTAACAAGTTTGTTGCT+GGG - Chr2:46233319-46233338 MsG0280009140.01.T01:intron 35.0%
!! TTTGGTAACAAGTTTGTTGC+TGG - Chr2:46233318-46233337 MsG0280009140.01.T01:intron 35.0%
!!! CTAGAATAAGGGTATTTTCG+AGG + Chr2:46229798-46229817 None:intergenic 35.0%
!!! CTCAAAGCTCTGGAAATTTT+GGG + Chr2:46228192-46228211 None:intergenic 35.0%
!!! GTTGGCCATGTTCTTTTTTA+AGG - Chr2:46233188-46233207 MsG0280009140.01.T01:intron 35.0%
!!! TACACTAGCATTTTTTGCAG+TGG - Chr2:46231798-46231817 MsG0280009140.01.T01:intron 35.0%
!!! TTTGTTTTACACTTCTGACC+TGG - Chr2:46233781-46233800 MsG0280009140.01.T01:intron 35.0%
AAAGAAGTGGATAAATCCCC+TGG - Chr2:46232789-46232808 MsG0280009140.01.T01:intron 40.0%
AACAACAACAACACTAACGG+CGG + Chr2:46228264-46228283 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + Chr2:46231537-46231556 None:intergenic 40.0%
AACAGTCAAAGTCTCGAGAA+GGG + Chr2:46230269-46230288 None:intergenic 40.0%
AAGAAACCATCAGGAGTAAC+AGG + Chr2:46228428-46228447 None:intergenic 40.0%
AAGTGAAACTTTGCTGCGAT+TGG + Chr2:46231028-46231047 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + Chr2:46231536-46231555 None:intergenic 40.0%
AGCATTCAATTAATGGTGGC+AGG - Chr2:46231061-46231080 MsG0280009140.01.T01:intron 40.0%
AGGATGGAACCATCAGAATA+TGG - Chr2:46233977-46233996 MsG0280009140.01.T01:CDS 40.0%
ATGAATTGACGAGCTGGTTA+AGG - Chr2:46234298-46234317 MsG0280009140.01.T01:five_prime_UTR 40.0%
CAACCCCATTACACTAAATC+GGG + Chr2:46229650-46229669 None:intergenic 40.0%
CAGCCACTTGTAACATAACA+TGG - Chr2:46230682-46230701 MsG0280009140.01.T01:intron 40.0%
CATCAAAAACCTAGACACTG+GGG + Chr2:46231194-46231213 None:intergenic 40.0%
CATGATCCACAGATATTGCA+AGG + Chr2:46233610-46233629 None:intergenic 40.0%
CATGTTATGTTACAAGTGGC+TGG + Chr2:46230684-46230703 None:intergenic 40.0%
CCAAAATTTCCAGAGCTTTG+AGG - Chr2:46228190-46228209 MsG0280009140.01.T01:three_prime_UTR 40.0%
CCAACCCCATTACACTAAAT+CGG + Chr2:46229651-46229670 None:intergenic 40.0%
CGCTATATTACAACAGCTGA+TGG - Chr2:46233117-46233136 MsG0280009140.01.T01:intron 40.0%
CGTACAATACACCAAATGGT+GGG + Chr2:46231505-46231524 None:intergenic 40.0%
CTAAATCGGGATTCTATGTG+TGG + Chr2:46229637-46229656 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + Chr2:46231531-46231550 None:intergenic 40.0%
GAATGTAAAAAAGGGCAACC+CGG - Chr2:46231439-46231458 MsG0280009140.01.T01:intron 40.0%
GACATCAAAAACCTAGACAC+TGG + Chr2:46231196-46231215 None:intergenic 40.0%
GACCATACTATGTTGACAGT+TGG - Chr2:46232900-46232919 MsG0280009140.01.T01:intron 40.0%
GACCCATGTTATGTTACAAG+TGG + Chr2:46230688-46230707 None:intergenic 40.0%
GCACCGCATATCATTTATGA+CGG + Chr2:46229238-46229257 None:intergenic 40.0%
GCATTCAATTAATGGTGGCA+GGG - Chr2:46231062-46231081 MsG0280009140.01.T01:intron 40.0%
GGGGATTTATCCACTTCTTT+AGG + Chr2:46232789-46232808 None:intergenic 40.0%
GTATAAGAGAGCAGGTCATA+AGG - Chr2:46228004-46228023 MsG0280009140.01.T01:three_prime_UTR 40.0%
GTGAACTTGTGTATGCTACA+CGG + Chr2:46233458-46233477 None:intergenic 40.0%
GTTACGAAAAGTAACACAGG+TGG + Chr2:46228240-46228259 None:intergenic 40.0%
GTTTGTATATATCTGGGAGC+AGG - Chr2:46232689-46232708 MsG0280009140.01.T01:intron 40.0%
GTTTGTGTGCAGCAAAGTTT+GGG - Chr2:46232012-46232031 MsG0280009140.01.T01:intron 40.0%
TAACAGTCAAAGTCTCGAGA+AGG + Chr2:46230270-46230289 None:intergenic 40.0%
TAGTTGAGAAGTCATTTGGC+TGG + Chr2:46231341-46231360 None:intergenic 40.0%
TATTCTGATGGTTCCATCCT+CGG + Chr2:46233977-46233996 None:intergenic 40.0%
TCAGAGGGTTTATCACCAAA+TGG - Chr2:46234027-46234046 MsG0280009140.01.T01:CDS 40.0%
TCTAGGCATGCACACTTTAA+TGG + Chr2:46232240-46232259 None:intergenic 40.0%
TGATGATCTTGGTTAGGGAT+TGG - Chr2:46231100-46231119 MsG0280009140.01.T01:intron 40.0%
TTTATCACCAAATGGAACCC+TGG - Chr2:46234035-46234054 MsG0280009140.01.T01:CDS 40.0%
! AACTGACTCATGCTTTGTAG+GGG + Chr2:46233497-46233516 None:intergenic 40.0%
! ACAGGGTGGTTTGTAATTTC+TGG + Chr2:46230654-46230673 None:intergenic 40.0%
! AGTTCATGTACTGATATGGG+AGG - Chr2:46232858-46232877 MsG0280009140.01.T01:intron 40.0%
! ATTTGCCTTCTCCTTTTCCA+GGG + Chr2:46234055-46234074 None:intergenic 40.0%
! CGATTTAGTGTAATGGGGTT+GGG - Chr2:46229649-46229668 MsG0280009140.01.T01:CDS 40.0%
! CTAACTGACTCATGCTTTGT+AGG + Chr2:46233499-46233518 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG - Chr2:46231529-46231548 MsG0280009140.01.T01:intron 40.0%
! GGAACATTTGAAGGGCATAA+AGG - Chr2:46228722-46228741 MsG0280009140.01.T01:intron 40.0%
! GGTGTTACGAAAAGTAACAC+AGG + Chr2:46228243-46228262 None:intergenic 40.0%
! TCACCTGTGATTTTCAGCTA+TGG - Chr2:46233237-46233256 MsG0280009140.01.T01:intron 40.0%
! TGAGGGTTTTCATATTGCAG+AGG - Chr2:46234101-46234120 MsG0280009140.01.T01:five_prime_UTR 40.0%
! TGCTGTTTGGAGTTGTTGTT+TGG - Chr2:46228745-46228764 MsG0280009140.01.T01:intron 40.0%
! TTTTGGCGTGCATAATTGTC+AGG + Chr2:46229463-46229482 None:intergenic 40.0%
!! GTGTTGACGAATGTTTTCAG+AGG - Chr2:46231125-46231144 MsG0280009140.01.T01:intron 40.0%
!! TGGTAACAAGTTTGTTGCTG+GGG - Chr2:46233320-46233339 MsG0280009140.01.T01:intron 40.0%
!!! CCTCAAAGCTCTGGAAATTT+TGG + Chr2:46228193-46228212 None:intergenic 40.0%
!!! TTTTTTTTTCTAACCCCCCG+CGG - Chr2:46229714-46229733 MsG0280009140.01.T01:intron 40.0%
AAAGGAGAAGGCAAATGCAG+AGG - Chr2:46234059-46234078 MsG0280009140.01.T01:exon 45.0%
ACCAAATGGAACCCTGGAAA+AGG - Chr2:46234041-46234060 MsG0280009140.01.T01:CDS 45.0%
ACCATCAGAATATGGCAGAC+AGG - Chr2:46233985-46234004 MsG0280009140.01.T01:CDS 45.0%
ACTAATGCAGGGGAACTTCA+TGG + Chr2:46231844-46231863 None:intergenic 45.0%
AGGAAAAAAGTGGACGTGGT+TGG + Chr2:46229778-46229797 None:intergenic 45.0%
AGGCTATGGGATGTAAGAAC+TGG - Chr2:46233030-46233049 MsG0280009140.01.T01:intron 45.0%
ATAAATCCCCTGGTTCAGTC+AGG - Chr2:46232799-46232818 MsG0280009140.01.T01:intron 45.0%
ATGAATGCAAGTGCACGTGT+TGG + Chr2:46229039-46229058 None:intergenic 45.0%
CAAGTCCAAAGGAAAGGAAG+AGG - Chr2:46234128-46234147 MsG0280009140.01.T01:five_prime_UTR 45.0%
CACCTTCCAGAAGCAATGTT+GGG + Chr2:46230956-46230975 None:intergenic 45.0%
CATGTATATTAGAGGGCCCA+AGG + Chr2:46234230-46234249 None:intergenic 45.0%
CATTTGGCTGGAATCACTGT+GGG + Chr2:46231329-46231348 None:intergenic 45.0%
CCATCAGAATATGGCAGACA+GGG - Chr2:46233986-46234005 MsG0280009140.01.T01:CDS 45.0%
CTATGACATGCCTTGCAATG+TGG - Chr2:46233272-46233291 MsG0280009140.01.T01:intron 45.0%
CTCACTTCAGCACTAGTCAT+AGG + Chr2:46233087-46233106 None:intergenic 45.0%
CTCTTCCTTTCCTTTGGACT+TGG + Chr2:46234130-46234149 None:intergenic 45.0%
GAAAAAAGTGGACGTGGTTG+GGG + Chr2:46229776-46229795 None:intergenic 45.0%
GCACGTGTTGGATGTTTATC+CGG + Chr2:46229027-46229046 None:intergenic 45.0%
GCATGCAACAAAGGACATCA+TGG - Chr2:46233898-46233917 MsG0280009140.01.T01:intron 45.0%
GCGTACAATACACCAAATGG+TGG + Chr2:46231506-46231525 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + Chr2:46231509-46231528 None:intergenic 45.0%
GGAAAAAAGTGGACGTGGTT+GGG + Chr2:46229777-46229796 None:intergenic 45.0%
GGCCAACTGTCAACATAGTA+TGG + Chr2:46232905-46232924 None:intergenic 45.0%
GGTAGAAGTAACACAGAGCT+GGG + Chr2:46228062-46228081 None:intergenic 45.0%
GGTTTGTGTGCAGCAAAGTT+TGG - Chr2:46232011-46232030 MsG0280009140.01.T01:intron 45.0%
TACAGTCCTGTTACTCCTGA+TGG - Chr2:46228419-46228438 MsG0280009140.01.T01:CDS 45.0%
TACGGTGTTCTATCTGGTGA+TGG - Chr2:46233873-46233892 MsG0280009140.01.T01:intron 45.0%
TAGATGCTAGTCCTATGCTG+AGG - Chr2:46228675-46228694 MsG0280009140.01.T01:intron 45.0%
TAGGGGGGAAAAGTTGAAAC+TGG + Chr2:46233480-46233499 None:intergenic 45.0%
TCATTTGGCTGGAATCACTG+TGG + Chr2:46231330-46231349 None:intergenic 45.0%
TGAGCAAGGACTGAGTGTAT+GGG - Chr2:46232435-46232454 MsG0280009140.01.T01:intron 45.0%
TGATGCACCTCCTAAAGAAG+TGG - Chr2:46232776-46232795 MsG0280009140.01.T01:intron 45.0%
TGGCAGAATGCAATGTGTAG+CGG + Chr2:46231824-46231843 None:intergenic 45.0%
TTCGAGGAAAAAAGTGGACG+TGG + Chr2:46229782-46229801 None:intergenic 45.0%
TTGAGCAAGGACTGAGTGTA+TGG - Chr2:46232434-46232453 MsG0280009140.01.T01:intron 45.0%
TTGGGCACTACATCTCTTCA+TGG + Chr2:46230878-46230897 None:intergenic 45.0%
! ACGGTACCTCTTGTTTGTCA+CGG - Chr2:46228368-46228387 MsG0280009140.01.T01:CDS 45.0%
! ACTGACTCATGCTTTGTAGG+GGG + Chr2:46233496-46233515 None:intergenic 45.0%
! ACTTCTTTAGGAGGTGCATC+AGG + Chr2:46232777-46232796 None:intergenic 45.0%
! ATACCCACCTTTTGCTCACT+GGG - Chr2:46232712-46232731 MsG0280009140.01.T01:intron 45.0%
! ATGTGATGGAACAGTAGGCT+AGG + Chr2:46229414-46229433 None:intergenic 45.0%
! CATTTGCCTTCTCCTTTTCC+AGG + Chr2:46234056-46234075 None:intergenic 45.0%
! CCGATTTAGTGTAATGGGGT+TGG - Chr2:46229648-46229667 MsG0280009140.01.T01:CDS 45.0%
! GAAGCTGATTCCACATTGCA+AGG + Chr2:46233285-46233304 None:intergenic 45.0%
! GGGTTTTCATATTGCAGAGG+AGG - Chr2:46234104-46234123 MsG0280009140.01.T01:five_prime_UTR 45.0%
! GTTTTCAGAGGCAAGTAGTG+AGG - Chr2:46231137-46231156 MsG0280009140.01.T01:intron 45.0%
! TCCTTTTCCAGGGTTCCATT+TGG + Chr2:46234045-46234064 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr2:46231540-46231559 MsG0280009140.01.T01:intron 45.0%
!! AAGGGCATAAAGGTGCTGTT+TGG - Chr2:46228732-46228751 MsG0280009140.01.T01:intron 45.0%
!! GGTAACAAGTTTGTTGCTGG+GGG - Chr2:46233321-46233340 MsG0280009140.01.T01:intron 45.0%
!! TTTCCAGAGCTTTGAGGGTT+AGG - Chr2:46228196-46228215 MsG0280009140.01.T01:three_prime_UTR 45.0%
!!! CAGAGCATGTGCTTTTTCTG+AGG - Chr2:46232084-46232103 MsG0280009140.01.T01:intron 45.0%
!!! TGGGGAAAGAGGGGTATTTT+TGG + Chr2:46229758-46229777 None:intergenic 45.0%
AACACTCCTGACTGAACCAG+GGG + Chr2:46232808-46232827 None:intergenic 50.0%
AAGTAACACAGAGCTGGGAG+AGG + Chr2:46228057-46228076 None:intergenic 50.0%
ACAGAAGAAAGGGACCAGAC+TGG - Chr2:46230997-46231016 MsG0280009140.01.T01:intron 50.0%
AGCAAAGCAAGCGCATGATG+AGG + Chr2:46229339-46229358 None:intergenic 50.0%
AGCACTAGTCATAGGCGACT+TGG + Chr2:46233079-46233098 None:intergenic 50.0%
ATCGTATGCATCAGGATCCG+AGG - Chr2:46233957-46233976 MsG0280009140.01.T01:CDS 50.0%
ATGCTGAGGAATGGAGAGAC+TGG - Chr2:46228689-46228708 MsG0280009140.01.T01:intron 50.0%
ATGGTCCTGTACACTGTGTC+CGG - Chr2:46233917-46233936 MsG0280009140.01.T01:intron 50.0%
ATGTTACAAGTGGCTGGGTG+TGG + Chr2:46230678-46230697 None:intergenic 50.0%
ATTCTCCTCCAGGAGAGAAC+CGG + Chr2:46233939-46233958 None:intergenic 50.0%
CAACACTCCTGACTGAACCA+GGG + Chr2:46232809-46232828 None:intergenic 50.0%
CAAGCGCATGATGAGGAAGT+GGG + Chr2:46229332-46229351 None:intergenic 50.0%
CACCCAACATTGCTTCTGGA+AGG - Chr2:46230951-46230970 MsG0280009140.01.T01:intron 50.0%
CACTCGTGAAGTTCAAGTCC+TGG + Chr2:46231561-46231580 None:intergenic 50.0%
CATGCGCTTGCTTTGCTCAT+TGG - Chr2:46229342-46229361 MsG0280009140.01.T01:CDS 50.0%
CCACCTTCCAGAAGCAATGT+TGG + Chr2:46230957-46230976 None:intergenic 50.0%
CCAGAAGCAATGTTGGGTGT+GGG + Chr2:46230950-46230969 None:intergenic 50.0%
CCCTGTCTGCCATATTCTGA+TGG + Chr2:46233989-46234008 None:intergenic 50.0%
CTGACTCATGCTTTGTAGGG+GGG + Chr2:46233495-46233514 None:intergenic 50.0%
GAGTGACCGTGACAAACAAG+AGG + Chr2:46228377-46228396 None:intergenic 50.0%
GATGCATACGATTCTCCTCC+AGG + Chr2:46233949-46233968 None:intergenic 50.0%
GCTAGTCCTATGCTGAGGAA+TGG - Chr2:46228680-46228699 MsG0280009140.01.T01:intron 50.0%
GCTTCGTTAGAGCCCAAGTT+TGG - Chr2:46233300-46233319 MsG0280009140.01.T01:intron 50.0%
GGAATGGAGAGACTGGAGAT+TGG - Chr2:46228696-46228715 MsG0280009140.01.T01:intron 50.0%
GGAGAGACTGGAGATTGGAT+TGG - Chr2:46228701-46228720 MsG0280009140.01.T01:intron 50.0%
GGAGGAGAATCGTATGCATC+AGG - Chr2:46233949-46233968 MsG0280009140.01.T01:intron 50.0%
GGCGTGCATAATTGTCAGGT+TGG + Chr2:46229459-46229478 None:intergenic 50.0%
GGGTAGAAGTAACACAGAGC+TGG + Chr2:46228063-46228082 None:intergenic 50.0%
GTCCAAAGGAAAGGAAGAGG+CGG - Chr2:46234131-46234150 MsG0280009140.01.T01:five_prime_UTR 50.0%
GTCTCTCCATTCCTCAGCAT+AGG + Chr2:46228689-46228708 None:intergenic 50.0%
GTGATGGCAGCATGCAACAA+AGG - Chr2:46233889-46233908 MsG0280009140.01.T01:intron 50.0%
TACCAATCTCATCGCCCGTA+TGG + Chr2:46233377-46233396 None:intergenic 50.0%
TATGCATCAGGATCCGAGGA+TGG - Chr2:46233961-46233980 MsG0280009140.01.T01:CDS 50.0%
TCAGGGAGTTTGTGGGATAC+TGG - Chr2:46234349-46234368 MsG0280009140.01.T01:five_prime_UTR 50.0%
TCCAAAGGAAAGGAAGAGGC+GGG - Chr2:46234132-46234151 MsG0280009140.01.T01:five_prime_UTR 50.0%
TCCAGAAGCAATGTTGGGTG+TGG + Chr2:46230951-46230970 None:intergenic 50.0%
TGAGGAAGTGGGATCCAGTA+TGG + Chr2:46229321-46229340 None:intergenic 50.0%
TGATTGTGACCCCAGTGTCT+AGG - Chr2:46231182-46231201 MsG0280009140.01.T01:intron 50.0%
TGCATCAAATACACCCGGTG+TGG + Chr2:46231233-46231252 None:intergenic 50.0%
TGGAACCCTGGAAAAGGAGA+AGG - Chr2:46234047-46234066 MsG0280009140.01.T01:CDS 50.0%
TGGGGTCACAATCACTGTTG+TGG + Chr2:46231176-46231195 None:intergenic 50.0%
TGTTACAAGTGGCTGGGTGT+GGG + Chr2:46230677-46230696 None:intergenic 50.0%
TTCCATACGGGCGATGAGAT+TGG - Chr2:46233372-46233391 MsG0280009140.01.T01:intron 50.0%
! AGTGCTGAAGTGAGTCAGGA+TGG - Chr2:46233093-46233112 MsG0280009140.01.T01:intron 50.0%
! CCAACATTGCTTCTGGAAGG+TGG - Chr2:46230954-46230973 MsG0280009140.01.T01:intron 50.0%
! GACTAGTGCTGAAGTGAGTC+AGG - Chr2:46233089-46233108 MsG0280009140.01.T01:intron 50.0%
! GATACCCACCTTTTGCTCAC+TGG - Chr2:46232711-46232730 MsG0280009140.01.T01:intron 50.0%
! TACCCACCTTTTGCTCACTG+GGG - Chr2:46232713-46232732 MsG0280009140.01.T01:intron 50.0%
! TGCGATTGGTTGTTCCAGTC+TGG + Chr2:46231014-46231033 None:intergenic 50.0%
!! GTTCAGTCAGGAGTGTTGCA+TGG - Chr2:46232811-46232830 MsG0280009140.01.T01:intron 50.0%
AACACAGAGCTGGGAGAGGA+AGG + Chr2:46228053-46228072 None:intergenic 55.0%
ACACAGAGCTGGGAGAGGAA+GGG + Chr2:46228052-46228071 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - Chr2:46231465-46231484 MsG0280009140.01.T01:intron 55.0%
ACTGTGTCCCTTCCTCCTAG+TGG - Chr2:46229388-46229407 MsG0280009140.01.T01:intron 55.0%
CAAAGGAAAGGAAGAGGCGG+GGG - Chr2:46234134-46234153 MsG0280009140.01.T01:five_prime_UTR 55.0%
CCAAAGGAAAGGAAGAGGCG+GGG - Chr2:46234133-46234152 MsG0280009140.01.T01:five_prime_UTR 55.0%
CCCACACCCAACATTGCTTC+TGG - Chr2:46230947-46230966 MsG0280009140.01.T01:intron 55.0%
CCTCCTAACCCTCAAAGCTC+TGG + Chr2:46228202-46228221 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG - Chr2:46231466-46231485 MsG0280009140.01.T01:intron 55.0%
GAACAGTAGGCTAGGCCACT+AGG + Chr2:46229406-46229425 None:intergenic 55.0%
GAAGGCAAATGCAGAGGAGG+AGG - Chr2:46234065-46234084 MsG0280009140.01.T01:exon 55.0%
GAGAACCGGACACAGTGTAC+AGG + Chr2:46233925-46233944 None:intergenic 55.0%
GAGGTTTCGCGCAGGATTGA+GGG - Chr2:46234084-46234103 MsG0280009140.01.T01:five_prime_UTR 55.0%
GCAACACTCCTGACTGAACC+AGG + Chr2:46232810-46232829 None:intergenic 55.0%
GCAAGCGCATGATGAGGAAG+TGG + Chr2:46229333-46229352 None:intergenic 55.0%
GGAGAAGGCAAATGCAGAGG+AGG - Chr2:46234062-46234081 MsG0280009140.01.T01:exon 55.0%
GGAGGCCAAGTCCAAAGGAA+AGG - Chr2:46234122-46234141 MsG0280009140.01.T01:five_prime_UTR 55.0%
GGCTGGAATCACTGTGGGAT+TGG + Chr2:46231324-46231343 None:intergenic 55.0%
TCCACGCATAGTGACCACAC+CGG - Chr2:46231216-46231235 MsG0280009140.01.T01:intron 55.0%
TCCCCCAGTGAGCAAAAGGT+GGG + Chr2:46232718-46232737 None:intergenic 55.0%
TGCTGGGGGAGAAGACTTGT+GGG - Chr2:46233335-46233354 MsG0280009140.01.T01:intron 55.0%
TGGACGTGGTTGGGGAAAGA+GGG + Chr2:46229768-46229787 None:intergenic 55.0%
TTGCTGGGGGAGAAGACTTG+TGG - Chr2:46233334-46233353 MsG0280009140.01.T01:intron 55.0%
! ACCCACCTTTTGCTCACTGG+GGG - Chr2:46232714-46232733 MsG0280009140.01.T01:intron 55.0%
!! CCAGAGCTTTGAGGGTTAGG+AGG - Chr2:46228199-46228218 MsG0280009140.01.T01:three_prime_UTR 55.0%
!! GCGACTTGGTGTCAAGTGTC+TGG + Chr2:46233065-46233084 None:intergenic 55.0%
!! GTACTGATATGGGAGGCGTC+AGG - Chr2:46232865-46232884 MsG0280009140.01.T01:intron 55.0%
AAGTGGCTGGGTGTGGGACA+GGG + Chr2:46230671-46230690 None:intergenic 60.0%
AGGCTAGGCCACTAGGAGGA+AGG + Chr2:46229399-46229418 None:intergenic 60.0%
CACTGTGTCCGGTTCTCTCC+TGG - Chr2:46233928-46233947 MsG0280009140.01.T01:intron 60.0%
CAGTAGGCTAGGCCACTAGG+AGG + Chr2:46229403-46229422 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG - Chr2:46231478-46231497 MsG0280009140.01.T01:intron 60.0%
CCACGCATAGTGACCACACC+GGG - Chr2:46231217-46231236 MsG0280009140.01.T01:intron 60.0%
CCCCGCCTCTTCCTTTCCTT+TGG + Chr2:46234136-46234155 None:intergenic 60.0%
CTCCCCCAGTGAGCAAAAGG+TGG + Chr2:46232719-46232738 None:intergenic 60.0%
CTGCTCCCCCAGTGAGCAAA+AGG + Chr2:46232722-46232741 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + Chr2:46231478-46231497 None:intergenic 60.0%
GCAGAGGAGGCCAAGTCCAA+AGG - Chr2:46234117-46234136 MsG0280009140.01.T01:five_prime_UTR 60.0%
GCATATGCAGGGTCCGGGAA+GGG - Chr2:46231477-46231496 MsG0280009140.01.T01:intron 60.0%
GGACGTGGTTGGGGAAAGAG+GGG + Chr2:46229767-46229786 None:intergenic 60.0%
GGAGGTTTCGCGCAGGATTG+AGG - Chr2:46234083-46234102 MsG0280009140.01.T01:five_prime_UTR 60.0%
GGCTAGGCCACTAGGAGGAA+GGG + Chr2:46229398-46229417 None:intergenic 60.0%
GTGGACGTGGTTGGGGAAAG+AGG + Chr2:46229769-46229788 None:intergenic 60.0%
TGTGTCCGGTTCTCTCCTGG+AGG - Chr2:46233931-46233950 MsG0280009140.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + Chr2:46231477-46231496 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + Chr2:46231461-46231480 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr2:46231493-46231512 None:intergenic 60.0%
! GTGTAATGGGGTTGGGCGCT+CGG - Chr2:46229656-46229675 MsG0280009140.01.T01:CDS 60.0%
AAAAAGAGCGGCGAGCCGCG+GGG + Chr2:46229732-46229751 None:intergenic 65.0%
AGCTGGGAGAGGAAGGGCCA+GGG + Chr2:46228046-46228065 None:intergenic 65.0%
AGGAAAGGAAGAGGCGGGGG+TGG - Chr2:46234137-46234156 MsG0280009140.01.T01:five_prime_UTR 65.0%
CAAAAAGAGCGGCGAGCCGC+GGG + Chr2:46229733-46229752 None:intergenic 65.0%
CAAGGATCACAGCGCAGCCG+TGG - Chr2:46231267-46231286 MsG0280009140.01.T01:intron 65.0%
CAAGTGGCTGGGTGTGGGAC+AGG + Chr2:46230672-46230691 None:intergenic 65.0%
CAGAGGAGGAGGTTTCGCGC+AGG - Chr2:46234076-46234095 MsG0280009140.01.T01:five_prime_UTR 65.0%
CCCGGTGTGGTCACTATGCG+TGG + Chr2:46231220-46231239 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - Chr2:46231476-46231495 MsG0280009140.01.T01:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr2:46231491-46231510 MsG0280009140.01.T01:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG - Chr2:46231472-46231491 MsG0280009140.01.T01:intron 65.0%
GCAAAAAGAGCGGCGAGCCG+CGG + Chr2:46229734-46229753 None:intergenic 65.0%
GCAAACCAATCCCTGCGCCC+TGG - Chr2:46228026-46228045 MsG0280009140.01.T01:three_prime_UTR 65.0%
GCTCCCGCATATGCAGGGTC+CGG - Chr2:46231471-46231490 MsG0280009140.01.T01:intron 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + Chr2:46231460-46231479 None:intergenic 65.0%
AAAAGAGCGGCGAGCCGCGG+GGG + Chr2:46229731-46229750 None:intergenic 70.0%
AAGGGCCAGGGCGCAGGGAT+TGG + Chr2:46228034-46228053 None:intergenic 70.0%
AGAGGAAGGGCCAGGGCGCA+GGG + Chr2:46228039-46228058 None:intergenic 70.0%
GAGCTGGGAGAGGAAGGGCC+AGG + Chr2:46228047-46228066 None:intergenic 70.0%
GGATCACAGCGCAGCCGTGG+TGG - Chr2:46231270-46231289 MsG0280009140.01.T01:intron 70.0%
TGGCTGGGTGTGGGACAGGG+TGG + Chr2:46230668-46230687 None:intergenic 70.0%
AAAGAGCGGCGAGCCGCGGG+GGG + Chr2:46229730-46229749 None:intergenic 75.0%
GAGAGGAAGGGCCAGGGCGC+AGG + Chr2:46228040-46228059 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 46228001 46234422 46228001 ID=MsG0280009140.01;Name=MsG0280009140.01
Chr2 mRNA 46228001 46234422 46228001 ID=MsG0280009140.01.T01;Parent=MsG0280009140.01;Name=MsG0280009140.01.T01;_AED=0.45;_eAED=0.45;_QI=349|1|1|1|0.83|0.85|7|255|352
Chr2 exon 46233956 46234422 46233956 ID=MsG0280009140.01.T01:exon:5123;Parent=MsG0280009140.01.T01
Chr2 exon 46233610 46233745 46233610 ID=MsG0280009140.01.T01:exon:5124;Parent=MsG0280009140.01.T01
Chr2 exon 46230318 46230399 46230318 ID=MsG0280009140.01.T01:exon:5125;Parent=MsG0280009140.01.T01
Chr2 exon 46229537 46229712 46229537 ID=MsG0280009140.01.T01:exon:5126;Parent=MsG0280009140.01.T01
Chr2 exon 46229254 46229391 46229254 ID=MsG0280009140.01.T01:exon:5127;Parent=MsG0280009140.01.T01
Chr2 exon 46229030 46229169 46229030 ID=MsG0280009140.01.T01:exon:5128;Parent=MsG0280009140.01.T01
Chr2 exon 46228001 46228524 46228001 ID=MsG0280009140.01.T01:exon:5129;Parent=MsG0280009140.01.T01
Chr2 five_prime_UTR 46234074 46234422 46234074 ID=MsG0280009140.01.T01:five_prime_utr;Parent=MsG0280009140.01.T01
Chr2 CDS 46233956 46234073 46233956 ID=MsG0280009140.01.T01:cds;Parent=MsG0280009140.01.T01
Chr2 CDS 46233610 46233745 46233610 ID=MsG0280009140.01.T01:cds;Parent=MsG0280009140.01.T01
Chr2 CDS 46230318 46230399 46230318 ID=MsG0280009140.01.T01:cds;Parent=MsG0280009140.01.T01
Chr2 CDS 46229537 46229712 46229537 ID=MsG0280009140.01.T01:cds;Parent=MsG0280009140.01.T01
Chr2 CDS 46229254 46229391 46229254 ID=MsG0280009140.01.T01:cds;Parent=MsG0280009140.01.T01
Chr2 CDS 46229030 46229169 46229030 ID=MsG0280009140.01.T01:cds;Parent=MsG0280009140.01.T01
Chr2 CDS 46228256 46228524 46228256 ID=MsG0280009140.01.T01:cds;Parent=MsG0280009140.01.T01
Chr2 three_prime_UTR 46228001 46228255 46228001 ID=MsG0280009140.01.T01:three_prime_utr;Parent=MsG0280009140.01.T01
Gene Sequence

>MsG0280009140.01.T01

ATGGAAAAGAAAAAAGTTACGGTACCTCTTGTTTGTCACGGTCACTCTCGTCCAGTTGTTGATCTCTTTTACAGTCCTGTTACTCCTGATGGTTTCTTTCTTATTAGCGCAAGCAAAGATGCTAGTCCTATGCTGAGGAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCATAAAGGTGCTGTTTGGAGTTGTTGTTTGGATGCTAATGCTTTGCGCGCTGCTACTGCTTCTGCTGATTTCTCAACCAAAGTTTGGGATGCATTAACAGGTGACGCGTTACATTCTTTTGAGCATAAGCACATTGTCAGAGCATGTGCTTTTTCTGAGGATACCCACCTTTTGCTCACTGGGGGAGCAGAGAAAATTCTCCGAATTTATGATTTGAATCGGCCTGATGCACCTCCTAAAGAAGTGGATAAATCCCCTGGTTCAGTCAGGAGTGTTGCATGGCTTCATAGTGACCAGACTATATTGAGTTCATGTACTGATATGGGAGGCGTCAGGCTATGGGATGTAAGAACTGGTAAAATTGTCCAGACACTTGACACCAAGTCGCCTATGACTAGTGCTGAAGTGAGTCAGGATGGTCGCTATATTACAACAGCTGATGGTTCTACTGTCAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGACATGCCTTGCAATGTGGAATCAGCTTCGTTAGAGCCCAAGTTTGGTAACAAGTTTGTTGCTGGGGGAGAAGACTTGTGGGTTCATGTTTTTGATTTCCATACGGGCGATGAGATTGCATGCAACAAAGGACATCATGGTCCTGTACACTGTGTCCGGTTCTCTCCTGGAGGAGAATCGTATGCATCAGGATCCGAGGATGGAACCATCAGAATATGGCAGACAGGGCCATTGACTCATGATGAATCAGAGGGTTTATCACCAAATGGAACCCTGGAAAAGGAGAAGGCAAATGCAGAGGAGGAGGTTTCGCGCAGGATTGAGGGTTTTCATATTGCAGAGGAGGCCAAGTCCAAAGGAAAGGAAGAGGCGGGGGTGGAATTATGA

Protein sequence

>MsG0280009140.01.T01

MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADFSTKVWDALTGDALHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPKEVDKSPGSVRSVAWLHSDQTILSSCTDMGGVRLWDVRTGKIVQTLDTKSPMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCNVESASLEPKFGNKFVAGGEDLWVHVFDFHTGDEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDESEGLSPNGTLEKEKANAEEEVSRRIEGFHIAEEAKSKGKEEAGVEL*