AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031562.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031562.01.T01 MTR_6g026940 94.382 178 7 2 1 178 1 175 8.01e-116 327
MsG0680031562.01.T01 MTR_6g027110 61.842 152 50 1 1 152 1 144 2.49e-46 150
MsG0680031562.01.T01 MTR_6g027030 60.390 154 53 1 1 154 1 146 1.33e-44 148
MsG0680031562.01.T01 MTR_4g078850 40.449 89 49 1 1 89 3 87 6.07e-14 69.7
MsG0680031562.01.T01 MTR_2g104030 44.706 85 36 2 2 81 70 148 1.49e-13 68.9
MsG0680031562.01.T01 MTR_2g014470 37.895 95 51 2 1 95 3 89 1.68e-13 68.2
MsG0680031562.01.T01 MTR_2g014480 36.957 92 53 2 1 92 3 89 5.86e-13 66.6
MsG0680031562.01.T01 MTR_2g090705 35.238 105 53 2 1 94 3 103 5.26e-12 63.9
MsG0680031562.01.T01 MTR_7g101070 47.059 68 32 1 2 69 358 421 5.96e-12 63.9
MsG0680031562.01.T01 MTR_4g109510 37.719 114 64 3 3 115 9 116 8.28e-12 63.9
MsG0680031562.01.T01 MTR_4g015840 42.029 69 36 1 1 69 3 67 8.76e-12 63.2
MsG0680031562.01.T01 MTR_7g069480 44.928 69 32 2 1 69 26 88 1.62e-11 62.8
MsG0680031562.01.T01 MTR_7g112360 41.791 67 38 1 3 69 17 82 2.12e-11 58.9
MsG0680031562.01.T01 MTR_3g108020 43.077 65 33 1 1 65 3 63 2.33e-11 62.0
MsG0680031562.01.T01 MTR_7g112360 41.791 67 38 1 3 69 17 82 2.85e-11 59.7
MsG0680031562.01.T01 MTR_3g087030 44.118 68 32 1 2 69 82 143 3.37e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031562.01.T01 AT2G41000 47.692 195 88 3 1 194 2 183 2.52e-44 146
MsG0680031562.01.T01 AT2G41000 45.745 188 80 4 1 183 2 172 3.44e-35 123
MsG0680031562.01.T01 AT4G28480 35.789 95 57 1 1 95 3 93 2.93e-14 70.1
MsG0680031562.01.T01 AT4G28480 35.789 95 57 1 1 95 3 93 3.85e-14 70.1
MsG0680031562.01.T01 AT5G03160 51.471 68 29 1 2 69 370 433 9.31e-14 69.3
MsG0680031562.01.T01 AT5G25530 37.778 90 49 2 1 90 3 85 1.82e-13 68.2
MsG0680031562.01.T01 AT2G20560 39.773 88 49 1 1 88 3 86 3.60e-13 67.4
MsG0680031562.01.T01 AT1G80030 39.560 91 49 1 2 92 75 159 3.93e-13 67.8
MsG0680031562.01.T01 AT1G80030 39.560 91 49 1 2 92 75 159 4.21e-13 67.4
MsG0680031562.01.T01 AT1G80030 39.560 91 49 1 2 92 75 159 4.21e-13 67.4
MsG0680031562.01.T01 AT1G80030 39.560 91 49 1 2 92 75 159 4.21e-13 67.4
MsG0680031562.01.T01 AT5G01390 46.970 66 31 1 1 66 3 64 5.88e-13 65.9
MsG0680031562.01.T01 AT5G01390 46.970 66 31 1 1 66 3 64 9.26e-13 65.1
MsG0680031562.01.T01 AT3G08910 43.478 69 35 1 1 69 3 67 1.35e-12 65.5
MsG0680031562.01.T01 AT5G16650 42.029 69 35 1 2 70 11 74 1.39e-12 62.4
MsG0680031562.01.T01 AT5G01390 46.970 66 31 1 1 66 3 64 1.43e-12 65.1
MsG0680031562.01.T01 AT5G01390 46.970 66 31 1 1 66 3 64 1.56e-12 65.5
MsG0680031562.01.T01 AT1G10350 31.933 119 68 3 1 119 3 108 2.06e-12 65.1
MsG0680031562.01.T01 AT2G33735 44.118 68 33 1 2 69 22 84 2.93e-12 61.6
MsG0680031562.01.T01 AT2G33735 44.118 68 33 1 2 69 22 84 2.93e-12 61.6
MsG0680031562.01.T01 AT5G16650 42.029 69 35 1 2 70 11 74 3.44e-12 62.4
MsG0680031562.01.T01 AT2G22360 40.659 91 47 2 2 92 86 169 3.63e-12 64.7
MsG0680031562.01.T01 AT4G39960 42.222 90 42 3 2 91 85 164 4.94e-12 64.3
MsG0680031562.01.T01 AT4G39960 42.222 90 42 3 2 91 85 164 4.94e-12 64.3
MsG0680031562.01.T01 AT1G59725 34.066 91 54 2 1 91 3 87 6.88e-12 63.5
MsG0680031562.01.T01 AT1G56300 40.299 67 39 1 3 69 14 79 1.58e-11 60.5
MsG0680031562.01.T01 AT1G56300 40.299 67 39 1 3 69 14 79 1.72e-11 59.3
MsG0680031562.01.T01 AT5G25530 34.694 98 49 3 1 90 3 93 6.93e-11 60.8

Find 104 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATCAAACCACCTAAATT+TGG 0.145054 6:+22350405 None:intergenic
ATTCAAGTGGAGAATCTTTA+TGG 0.183653 6:-22351446 MsG0680031562.01.T01:CDS
TGCTTTCTCAATGGTGTTCA+TGG 0.193983 6:+22350980 None:intergenic
AGTCACGCTGTCGTAGATTT+AGG 0.208884 6:-22350655 MsG0680031562.01.T01:three_prime_UTR
CAAAATCGCATTCAAGAAAT+TGG 0.241335 6:-22354554 MsG0680031562.01.T01:CDS
ATGGATCATTACAAGGTTCT+AGG 0.255976 6:-22354607 MsG0680031562.01.T01:CDS
ATTGGATTAAATGCAGTTAA+TGG 0.257859 6:-22350630 MsG0680031562.01.T01:three_prime_UTR
GTTAGCATGTATTCCATATA+CGG 0.264525 6:-22350695 MsG0680031562.01.T01:three_prime_UTR
GATGATTGAGAATGCTTATC+TGG 0.265847 6:+22354517 None:intergenic
TTATGGAAGATGCAAAATTC+TGG 0.280003 6:-22351429 MsG0680031562.01.T01:CDS
ATAATGGAAGCTTTCAGTTT+TGG 0.281002 6:-22350854 MsG0680031562.01.T01:three_prime_UTR
GTATTCCATATACGGGATAT+TGG 0.286878 6:-22350687 MsG0680031562.01.T01:three_prime_UTR
CGAAACCCAATCCCAAATTT+AGG 0.300897 6:-22350417 MsG0680031562.01.T01:three_prime_UTR
CGCTGGCGGGCAGGTGGTGG+TGG 0.303507 6:-22354397 MsG0680031562.01.T01:CDS
AGTGGGAGTGGGAGTGGGAG+TGG 0.303650 6:-22354292 MsG0680031562.01.T01:CDS
TGAAGCGTATGAGGTTCTTA+TGG 0.315224 6:-22354449 MsG0680031562.01.T01:CDS
AGTGGGAGTGGGAGTGGGAG+TGG 0.316616 6:-22354298 MsG0680031562.01.T01:CDS
AGGTCTTCGCTTCTTAATCT+TGG 0.333228 6:-22354184 MsG0680031562.01.T01:CDS
AGAATCCAATATCCCGTATA+TGG 0.336125 6:+22350682 None:intergenic
GGGAGTGGGAGTGGTTATTA+TGG 0.337834 6:-22354283 MsG0680031562.01.T01:CDS
GGGTCTGCTGGTGGTGGTGG+TGG 0.350430 6:-22354253 MsG0680031562.01.T01:CDS
GAAATTAGATTTGTGGAAGT+TGG 0.350924 6:-22350370 MsG0680031562.01.T01:three_prime_UTR
GGTAGAAGTGGGAGTGGGAG+TGG 0.353741 6:-22354304 MsG0680031562.01.T01:CDS
TCTCAGTATAGTTATGGATA+TGG 0.357769 6:-22354325 MsG0680031562.01.T01:CDS
AGTGGGTCTGCTGGTGGTGG+TGG 0.368130 6:-22354256 MsG0680031562.01.T01:CDS
TCATCAAACCACCTAAATTT+GGG 0.369666 6:+22350406 None:intergenic
ATATTACTGAGGTTGAAATC+TGG 0.370789 6:-22350517 MsG0680031562.01.T01:three_prime_UTR
TACCAATCTCAGTATAGTTA+TGG 0.371369 6:-22354331 MsG0680031562.01.T01:CDS
AACCACCTAAATTTGGGATT+GGG 0.388063 6:+22350412 None:intergenic
TTCTTGGCCAGAGCTATATT+AGG 0.391764 6:-22351486 MsG0680031562.01.T01:intron
GTCACGCTGTCGTAGATTTA+GGG 0.397873 6:-22350654 MsG0680031562.01.T01:three_prime_UTR
AAACCACCTAAATTTGGGAT+TGG 0.399641 6:+22350411 None:intergenic
TTTAATTACCGCTGGCGGGC+AGG 0.400886 6:-22354406 MsG0680031562.01.T01:CDS
GTTTAAGAAATAGTGAATAA+TGG 0.402577 6:-22350870 MsG0680031562.01.T01:three_prime_UTR
TACCGCTGGCGGGCAGGTGG+TGG 0.406954 6:-22354400 MsG0680031562.01.T01:CDS
TGGCGGGCAGGTGGTGGTGG+AGG 0.410549 6:-22354394 MsG0680031562.01.T01:CDS
ATCCATAACTATACTGAGAT+TGG 0.424135 6:+22354329 None:intergenic
TGATCAAGAACGAATGGTTC+AGG 0.432345 6:-22350569 MsG0680031562.01.T01:three_prime_UTR
TATGGAAGATGCAAAATTCT+GGG 0.433386 6:-22351428 MsG0680031562.01.T01:CDS
GTGGGAGTGGGAGTGGGAGT+GGG 0.436067 6:-22354297 MsG0680031562.01.T01:CDS
GGAGGAAGTGCCGGTGCTGC+CGG 0.439766 6:-22354376 MsG0680031562.01.T01:CDS
GCAGGTTTCTGAAGCGTATG+AGG 0.452788 6:-22354458 MsG0680031562.01.T01:CDS
AGAAGTGGGTCTGCTGGTGG+TGG 0.454558 6:-22354259 MsG0680031562.01.T01:CDS
GGTGGTGGTGGAGGAAGTGC+CGG 0.464885 6:-22354385 MsG0680031562.01.T01:CDS
CTGTCGTAGATTTAGGGGAT+TGG 0.468073 6:-22350648 MsG0680031562.01.T01:three_prime_UTR
GTAGAAGTGGGAGTGGGAGT+GGG 0.470848 6:-22354303 MsG0680031562.01.T01:CDS
AGTCCGATCTTGATCGTGTT+CGG 0.471830 6:-22350492 MsG0680031562.01.T01:three_prime_UTR
TTACAATTGCACAAGTAACT+AGG 0.480406 6:+22350726 None:intergenic
ACCATTCGTTCTTGATCAGA+TGG 0.486440 6:+22350574 None:intergenic
AGTTATGGATATGGTAGAAG+TGG 0.488178 6:-22354316 MsG0680031562.01.T01:CDS
GATGGCTGAAATTAGATTTG+TGG 0.492102 6:-22350377 MsG0680031562.01.T01:three_prime_UTR
AGATTGGTAATAATAGTTAC+CGG 0.500641 6:+22354345 None:intergenic
AGTTAATGGTGGGTGCAGTC+AGG 0.503970 6:-22350616 MsG0680031562.01.T01:three_prime_UTR
TGCAACAATTCGATTCAAGC+AGG 0.505093 6:-22354476 MsG0680031562.01.T01:CDS
TTGCAATTTGCCTCACTAAG+TGG 0.506033 6:-22350763 MsG0680031562.01.T01:three_prime_UTR
TATGGTAGAAGTGGGTCTGC+TGG 0.512264 6:-22354265 MsG0680031562.01.T01:CDS
CTCCATCATGGATCATTACA+AGG 0.515879 6:-22354614 None:intergenic
GGCACTTCCACCGGCAGCAC+CGG 0.517415 6:+22354366 None:intergenic
TGGATCATTACAAGGTTCTA+GGG 0.519987 6:-22354606 MsG0680031562.01.T01:CDS
ACTGTTGCATGACAATCATA+TGG 0.522342 6:+22350339 None:intergenic
CGTCCGAACACGATCAAGAT+CGG 0.529128 6:+22350489 None:intergenic
TGAGTTTAATTACCGCTGGC+GGG 0.532007 6:-22354410 MsG0680031562.01.T01:CDS
GGTTTCGTTGCAGTCAAAAG+TGG 0.534299 6:+22350433 None:intergenic
CAAATTTAGGTGGTTTGATG+AGG 0.540406 6:-22350404 MsG0680031562.01.T01:three_prime_UTR
GTGGTTTGATGAGGATCTGA+TGG 0.541368 6:-22350395 MsG0680031562.01.T01:three_prime_UTR
TACAAGTATACTTTCTACAT+TGG 0.542772 6:+22350260 None:intergenic
AAGATTAAGAAGCGAAGACC+TGG 0.546757 6:+22354186 None:intergenic
AATTACCGCTGGCGGGCAGG+TGG 0.547647 6:-22354403 MsG0680031562.01.T01:CDS
GGATTAAATGCAGTTAATGG+TGG 0.547941 6:-22350627 MsG0680031562.01.T01:three_prime_UTR
CTGAGTTTAATTACCGCTGG+CGG 0.548446 6:-22354411 MsG0680031562.01.T01:CDS
TACAATTGCACAAGTAACTA+GGG 0.549039 6:+22350727 None:intergenic
ATAGTTACCGGCACTTCCAC+CGG 0.551666 6:+22354357 None:intergenic
GGTGCTGCCGGTGGAAGTGC+CGG 0.554174 6:-22354364 MsG0680031562.01.T01:CDS
AGTGGTTATTATGGTAGAAG+TGG 0.556969 6:-22354274 MsG0680031562.01.T01:CDS
TCACGCTGTCGTAGATTTAG+GGG 0.558667 6:-22350653 MsG0680031562.01.T01:three_prime_UTR
GTGCTGAGTTTAATTACCGC+TGG 0.563607 6:-22354414 MsG0680031562.01.T01:CDS
CAGAGCTATATTAGGTGCGA+TGG 0.564743 6:-22351478 MsG0680031562.01.T01:CDS
TTAGCATGTATTCCATATAC+GGG 0.567478 6:-22350694 MsG0680031562.01.T01:three_prime_UTR
ATGGTTGTTGTTGATTCAAG+TGG 0.568671 6:-22351459 MsG0680031562.01.T01:CDS
GGATATGGTAGAAGTGGGAG+TGG 0.570275 6:-22354310 MsG0680031562.01.T01:CDS
ATGAGGTTCTTATGGATGAT+CGG 0.570550 6:-22354441 MsG0680031562.01.T01:CDS
GAGAGCAGATAACTGAATCA+AGG 0.571592 6:+22350924 None:intergenic
ATTGCACAAGTAACTAGGGA+AGG 0.574247 6:+22350731 None:intergenic
GGAAGTGCCGGTGCTGCCGG+TGG 0.574627 6:-22354373 MsG0680031562.01.T01:CDS
GTGGTTATTATGGTAGAAGT+GGG 0.575671 6:-22354273 MsG0680031562.01.T01:CDS
GTTTCGTTGCAGTCAAAAGT+GGG 0.577550 6:+22350434 None:intergenic
GTTATGGATATGGTAGAAGT+GGG 0.577613 6:-22354315 MsG0680031562.01.T01:CDS
GGTAGAAGTGGGTCTGCTGG+TGG 0.582664 6:-22354262 MsG0680031562.01.T01:CDS
TTCTTGATCAGATGGTTCAG+AGG 0.589867 6:+22350582 None:intergenic
AACCCAATCCCAAATTTAGG+TGG 0.593664 6:-22350414 MsG0680031562.01.T01:three_prime_UTR
ACCATCTGATCAAGAACGAA+TGG 0.594416 6:-22350575 MsG0680031562.01.T01:three_prime_UTR
CACCACCACCTGCCCGCCAG+CGG 0.599864 6:+22354398 None:intergenic
GGAAGAGAGACCACTTAGTG+AGG 0.603834 6:+22350753 None:intergenic
ATGGAAGATGCAAAATTCTG+GGG 0.612791 6:-22351427 MsG0680031562.01.T01:intron
CATTCGAGTGGCAAGTGAAG+CGG 0.614106 6:+22350902 None:intergenic
GGGTGTAGTCATCATGCAGT+CGG 0.626825 6:+22350454 None:intergenic
CGATCTTGATCGTGTTCGGA+CGG 0.628210 6:-22350488 MsG0680031562.01.T01:three_prime_UTR
TGATTGTCATGCAACAGTCG+AGG 0.633986 6:-22350334 MsG0680031562.01.T01:three_prime_UTR
GCAAATTGCAAGAGACAACA+AGG 0.635009 6:+22350775 None:intergenic
GATTAAATGCAGTTAATGGT+GGG 0.641786 6:-22350626 MsG0680031562.01.T01:three_prime_UTR
TTGCACAAGTAACTAGGGAA+GGG 0.651100 6:+22350732 None:intergenic
GATATGGTAGAAGTGGGAGT+GGG 0.662980 6:-22354309 MsG0680031562.01.T01:CDS
AACGTGAAGAAGCATTCGAG+TGG 0.683317 6:+22350890 None:intergenic
GCATGGATATAGTATATGTG+CGG 0.738124 6:-22350822 MsG0680031562.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAGTAAAAATGTTATATT+TGG + Chr6:22351845-22351864 None:intergenic 10.0%
!!! AATTATTGACTAATTAATTT+GGG - Chr6:22351932-22351951 MsG0680031562.01.T01:intron 10.0%
!!! ATTTTATAAATACTGATTTT+TGG - Chr6:22350833-22350852 MsG0680031562.01.T01:three_prime_UTR 10.0%
!!! TTTTATAAATACTGATTTTT+GGG - Chr6:22350834-22350853 MsG0680031562.01.T01:three_prime_UTR 10.0%
!!! TTTTTTATTTAATATTACTG+AGG - Chr6:22354304-22354323 MsG0680031562.01.T01:CDS 10.0%
!! AATAATATTACAAAAGTGAA+AGG + Chr6:22353805-22353824 None:intergenic 15.0%
!!! ATTTTTACTAAAGATCAAAA+TGG - Chr6:22351853-22351872 MsG0680031562.01.T01:intron 15.0%
!!! GAATTATTGACTAATTAATT+TGG - Chr6:22351931-22351950 MsG0680031562.01.T01:intron 15.0%
!!! TCATATCTCATTTAATTTAA+TGG - Chr6:22352034-22352053 MsG0680031562.01.T01:intron 15.0%
!!! TTTATAAATACTGATTTTTG+GGG - Chr6:22350835-22350854 MsG0680031562.01.T01:three_prime_UTR 15.0%
!! ATTTGAGCATCAATAATTTA+AGG + Chr6:22353246-22353265 None:intergenic 20.0%
!! GTTTAAGAAATAGTGAATAA+TGG - Chr6:22353962-22353981 MsG0680031562.01.T01:intron 20.0%
!! TATCATTGAGAATAAACAAA+AGG + Chr6:22353549-22353568 None:intergenic 20.0%
!!! ATAAATTTGGGGTTTTTATT+CGG - Chr6:22350613-22350632 MsG0680031562.01.T01:three_prime_UTR 20.0%
!!! TATCTCATTTAATTTAATGG+TGG - Chr6:22352037-22352056 MsG0680031562.01.T01:intron 20.0%
!!! TTTTACAAGATTTTTGTTCT+TGG - Chr6:22352406-22352425 MsG0680031562.01.T01:intron 20.0%
! AAAAATCTTGTAAAATCGTC+AGG + Chr6:22352401-22352420 None:intergenic 25.0%
! AAAGATCAAAATGGAAAACA+GGG - Chr6:22351862-22351881 MsG0680031562.01.T01:intron 25.0%
! AACCAAATTTAAATGAGAAC+AGG - Chr6:22352972-22352991 MsG0680031562.01.T01:intron 25.0%
! AACCTGTTCTCATTTAAATT+TGG + Chr6:22352977-22352996 None:intergenic 25.0%
! AATAAGATGTTTATCCAAAC+AGG - Chr6:22351252-22351271 MsG0680031562.01.T01:intron 25.0%
! ACTTATGAAAGCTTATAACA+TGG + Chr6:22351326-22351345 None:intergenic 25.0%
! AGAAAGAAAAACTGTCAATA+TGG + Chr6:22353686-22353705 None:intergenic 25.0%
! AGAACTTATGATATGTTCAT+GGG - Chr6:22351072-22351091 MsG0680031562.01.T01:intron 25.0%
! ATAAGATGTTTATCCAAACA+GGG - Chr6:22351253-22351272 MsG0680031562.01.T01:intron 25.0%
! ATGCAATATCAAAATGAAAC+TGG + Chr6:22352697-22352716 None:intergenic 25.0%
! CAACTCAAAATTGAAACAAA+GGG + Chr6:22353501-22353520 None:intergenic 25.0%
! CTGAAAAATATAATCATCTG+CGG + Chr6:22353648-22353667 None:intergenic 25.0%
! GTGTAAAAGTAATTCAATGT+TGG - Chr6:22354610-22354629 MsG0680031562.01.T01:CDS 25.0%
! TAAAGATCAAAATGGAAAAC+AGG - Chr6:22351861-22351880 MsG0680031562.01.T01:intron 25.0%
! TACAAGTATACTTTCTACAT+TGG + Chr6:22354575-22354594 None:intergenic 25.0%
! TCAACTCAAAATTGAAACAA+AGG + Chr6:22353502-22353521 None:intergenic 25.0%
! TGCAATATCAAAATGAAACT+GGG + Chr6:22352696-22352715 None:intergenic 25.0%
! TTATTGTGAAGATGATAGAA+CGG + Chr6:22353044-22353063 None:intergenic 25.0%
! TTCAGAATCATATGCATATT+TGG - Chr6:22352232-22352251 MsG0680031562.01.T01:intron 25.0%
!! AATTGTTGCATTTTCTCTAA+CGG + Chr6:22350346-22350365 None:intergenic 25.0%
!! AGATTGGTAATAATAGTTAC+CGG + Chr6:22350490-22350509 None:intergenic 25.0%
!! ATATTTTTCTGATAACCTGA+TGG - Chr6:22353319-22353338 MsG0680031562.01.T01:intron 25.0%
!! TGTATTAGCATAAACTTGTT+TGG - Chr6:22350989-22351008 MsG0680031562.01.T01:CDS 25.0%
!!! AATTTTGAGTTGATATCAGT+TGG - Chr6:22353509-22353528 MsG0680031562.01.T01:intron 25.0%
!!! ACTGAAGTGTCTTTTAATTT+GGG - Chr6:22351611-22351630 MsG0680031562.01.T01:intron 25.0%
!!! TAAGTTTTATGAGACTGTTT+AGG + Chr6:22351352-22351371 None:intergenic 25.0%
AAAATATGTCACACTAATGC+AGG + Chr6:22353144-22353163 None:intergenic 30.0%
AAATATGTCACACTAATGCA+GGG + Chr6:22353143-22353162 None:intergenic 30.0%
AAGATCAAAATGGAAAACAG+GGG - Chr6:22351863-22351882 MsG0680031562.01.T01:intron 30.0%
AATTTAACTGAGACCCTATT+TGG - Chr6:22350923-22350942 MsG0680031562.01.T01:exon 30.0%
ACTTTCCTGATGCAAATTAA+TGG + Chr6:22352134-22352153 None:intergenic 30.0%
ATATTACTGAGGTTGAAATC+TGG - Chr6:22354315-22354334 MsG0680031562.01.T01:CDS 30.0%
ATCCATAACTATACTGAGAT+TGG + Chr6:22350506-22350525 None:intergenic 30.0%
ATTCAAGTGGAGAATCTTTA+TGG - Chr6:22353386-22353405 MsG0680031562.01.T01:intron 30.0%
ATTTGAACATTGACACTAGA+AGG - Chr6:22351471-22351490 MsG0680031562.01.T01:CDS 30.0%
ATTTGCATCAGGAAAGTTAA+AGG - Chr6:22352137-22352156 MsG0680031562.01.T01:intron 30.0%
CAAAATCGCATTCAAGAAAT+TGG - Chr6:22350278-22350297 MsG0680031562.01.T01:three_prime_UTR 30.0%
CAAATTAATGGCCAATTCTA+TGG + Chr6:22352122-22352141 None:intergenic 30.0%
CAGTCTCATAAAACTTAGAT+AGG - Chr6:22351355-22351374 MsG0680031562.01.T01:intron 30.0%
GAAATTAGATTTGTGGAAGT+TGG - Chr6:22354462-22354481 MsG0680031562.01.T01:CDS 30.0%
GAGAACTTATGATATGTTCA+TGG - Chr6:22351071-22351090 MsG0680031562.01.T01:intron 30.0%
GATATGACTTATTGATCCAA+TGG + Chr6:22352016-22352035 None:intergenic 30.0%
GCTGCACATAAAATTAACAT+AGG + Chr6:22353765-22353784 None:intergenic 30.0%
GGTGGAATTAATTTATGCAA+TGG - Chr6:22352055-22352074 MsG0680031562.01.T01:intron 30.0%
GTTAGCATGTATTCCATATA+CGG - Chr6:22354137-22354156 MsG0680031562.01.T01:intron 30.0%
TACAATTGCACAAGTAACTA+GGG + Chr6:22354108-22354127 None:intergenic 30.0%
TACCAATCTCAGTATAGTTA+TGG - Chr6:22350501-22350520 MsG0680031562.01.T01:three_prime_UTR 30.0%
TATGGAAGATGCAAAATTCT+GGG - Chr6:22353404-22353423 MsG0680031562.01.T01:intron 30.0%
TATTGATCCAATGGTGAAAA+TGG + Chr6:22352007-22352026 None:intergenic 30.0%
TCAATAATTCAAACTCATGC+TGG + Chr6:22351921-22351940 None:intergenic 30.0%
TCATCAAACCACCTAAATTT+GGG + Chr6:22354429-22354448 None:intergenic 30.0%
TCTCAGTATAGTTATGGATA+TGG - Chr6:22350507-22350526 MsG0680031562.01.T01:three_prime_UTR 30.0%
TGCAAATATTGAGATACTTC+AGG - Chr6:22352925-22352944 MsG0680031562.01.T01:intron 30.0%
TGGACAATATCTCATAAAAG+TGG - Chr6:22351726-22351745 MsG0680031562.01.T01:intron 30.0%
TTACAATTGCACAAGTAACT+AGG + Chr6:22354109-22354128 None:intergenic 30.0%
TTAGCATGTATTCCATATAC+GGG - Chr6:22354138-22354157 MsG0680031562.01.T01:intron 30.0%
TTATGGAAGATGCAAAATTC+TGG - Chr6:22353403-22353422 MsG0680031562.01.T01:intron 30.0%
TTCAAAACAGACAATACCTT+GGG - Chr6:22351426-22351445 MsG0680031562.01.T01:intron 30.0%
TTTCAAAACAGACAATACCT+TGG - Chr6:22351425-22351444 MsG0680031562.01.T01:intron 30.0%
! ACAAATACCATTTTCACCAT+TGG - Chr6:22351997-22352016 MsG0680031562.01.T01:intron 30.0%
! ACATTCAATGATTTCGCTTT+TGG + Chr6:22352893-22352912 None:intergenic 30.0%
! ATACACTTTTGCTTTCTCAA+TGG + Chr6:22353864-22353883 None:intergenic 30.0%
! GCATGGACTATTTACATTAT+GGG - Chr6:22352839-22352858 MsG0680031562.01.T01:intron 30.0%
! GGTTTTTATTCGGATTTTGA+CGG - Chr6:22350623-22350642 MsG0680031562.01.T01:three_prime_UTR 30.0%
! TAATGGAAGCTTTCAGTTTT+GGG - Chr6:22353979-22353998 MsG0680031562.01.T01:intron 30.0%
! TGCATGGACTATTTACATTA+TGG - Chr6:22352838-22352857 MsG0680031562.01.T01:intron 30.0%
! TGCTATCTTTTCATGAATGT+TGG - Chr6:22351809-22351828 MsG0680031562.01.T01:intron 30.0%
!! ATAATGGAAGCTTTCAGTTT+TGG - Chr6:22353978-22353997 MsG0680031562.01.T01:intron 30.0%
!! CACTGAAGTGTCTTTTAATT+TGG - Chr6:22351610-22351629 MsG0680031562.01.T01:intron 30.0%
!! GAAGTCTTTCGTTTTATTCT+TGG - Chr6:22351759-22351778 MsG0680031562.01.T01:intron 30.0%
!! TAGCTTTAAAGATCAGTCTT+GGG + Chr6:22352656-22352675 None:intergenic 30.0%
!! TATTAAGTTGACTACACTTG+TGG + Chr6:22352170-22352189 None:intergenic 30.0%
AAAGACACTTCAGTGAATTG+AGG + Chr6:22351605-22351624 None:intergenic 35.0%
AAAGCGAAGACTTAAAGACT+GGG + Chr6:22352279-22352298 None:intergenic 35.0%
AATTCCGACATATTTGACCA+TGG + Chr6:22352775-22352794 None:intergenic 35.0%
ACTGTTGCATGACAATCATA+TGG + Chr6:22354496-22354515 None:intergenic 35.0%
AGAATCCAATATCCCGTATA+TGG + Chr6:22354153-22354172 None:intergenic 35.0%
AGTGGTTATTATGGTAGAAG+TGG - Chr6:22350558-22350577 MsG0680031562.01.T01:three_prime_UTR 35.0%
AGTTATGGATATGGTAGAAG+TGG - Chr6:22350516-22350535 MsG0680031562.01.T01:three_prime_UTR 35.0%
ATAACCTGATGGAAGATTCT+TGG - Chr6:22353330-22353349 MsG0680031562.01.T01:intron 35.0%
ATAGGCCGTTTATCCAAATA+GGG + Chr6:22350939-22350958 None:intergenic 35.0%
ATATTTACTATACCCACCAC+TGG - Chr6:22353208-22353227 MsG0680031562.01.T01:intron 35.0%
ATCGTCAGGTTATTATTGTG+AGG + Chr6:22352387-22352406 None:intergenic 35.0%
ATGAGACTCTCTATCATGAT+CGG + Chr6:22353089-22353108 None:intergenic 35.0%
ATGAGGTTCTTATGGATGAT+CGG - Chr6:22350391-22350410 MsG0680031562.01.T01:three_prime_UTR 35.0%
ATGGAAGATGCAAAATTCTG+GGG - Chr6:22353405-22353424 MsG0680031562.01.T01:intron 35.0%
ATGGATCATTACAAGGTTCT+AGG - Chr6:22350225-22350244 MsG0680031562.01.T01:three_prime_UTR 35.0%
CAAATTTAGGTGGTTTGATG+AGG - Chr6:22354428-22354447 MsG0680031562.01.T01:CDS 35.0%
CTCACTGTATTTGATTCACT+AGG - Chr6:22350896-22350915 MsG0680031562.01.T01:three_prime_UTR 35.0%
CTCATCAAACCACCTAAATT+TGG + Chr6:22354430-22354449 None:intergenic 35.0%
GATGATTGAGAATGCTTATC+TGG + Chr6:22350318-22350337 None:intergenic 35.0%
GATGGCTGAAATTAGATTTG+TGG - Chr6:22354455-22354474 MsG0680031562.01.T01:CDS 35.0%
GCATGGATATAGTATATGTG+CGG - Chr6:22354010-22354029 MsG0680031562.01.T01:intron 35.0%
GTATTCCATATACGGGATAT+TGG - Chr6:22354145-22354164 MsG0680031562.01.T01:intron 35.0%
GTGAAAATGGTATTTGTGCA+TGG + Chr6:22351994-22352013 None:intergenic 35.0%
GTGGTTATTATGGTAGAAGT+GGG - Chr6:22350559-22350578 MsG0680031562.01.T01:three_prime_UTR 35.0%
GTTATGGATATGGTAGAAGT+GGG - Chr6:22350517-22350536 MsG0680031562.01.T01:three_prime_UTR 35.0%
TATAGGCCGTTTATCCAAAT+AGG + Chr6:22350940-22350959 None:intergenic 35.0%
TCGATCCAACAAAATTGTGA+GGG - Chr6:22351392-22351411 MsG0680031562.01.T01:intron 35.0%
TCGTCAGGTTATTATTGTGA+GGG + Chr6:22352386-22352405 None:intergenic 35.0%
TGAGACCCTATTTGGATAAA+CGG - Chr6:22350931-22350950 MsG0680031562.01.T01:exon 35.0%
TGCTCGCATATGATTTAACT+TGG - Chr6:22351706-22351725 MsG0680031562.01.T01:intron 35.0%
TGGATCATTACAAGGTTCTA+GGG - Chr6:22350226-22350245 MsG0680031562.01.T01:three_prime_UTR 35.0%
TGTTCCATTCTCAAACATGT+TGG - Chr6:22352204-22352223 MsG0680031562.01.T01:intron 35.0%
TGTTTCATCGTTTCTTGTCA+TGG - Chr6:22353613-22353632 MsG0680031562.01.T01:intron 35.0%
TTAGGTGAAATGTGTATCAG+TGG + Chr6:22351671-22351690 None:intergenic 35.0%
TTATTATTGTGAGGGAAGTG+AGG + Chr6:22352378-22352397 None:intergenic 35.0%
TTCACAAGTCCTCCAATATA+TGG + Chr6:22351279-22351298 None:intergenic 35.0%
! AAACCACCTAAATTTGGGAT+TGG + Chr6:22354424-22354443 None:intergenic 35.0%
! AACCACCTAAATTTGGGATT+GGG + Chr6:22354423-22354442 None:intergenic 35.0%
! AATGGAAGCTTTCAGTTTTG+GGG - Chr6:22353980-22353999 MsG0680031562.01.T01:intron 35.0%
! ACTGTATAGACGTTGACTAA+AGG + Chr6:22352466-22352485 None:intergenic 35.0%
! ATCAGTTGGTTCATATGTAC+TGG - Chr6:22353523-22353542 MsG0680031562.01.T01:intron 35.0%
! GGTCAAATATGTCGGAATTT+TGG - Chr6:22352776-22352795 MsG0680031562.01.T01:intron 35.0%
! TTTTTCTCCATAGTTCTCCA+TGG + Chr6:22352504-22352523 None:intergenic 35.0%
!! AGTGGTGGGTATAGTAAATA+TGG + Chr6:22353209-22353228 None:intergenic 35.0%
!! ATGGTTGTTGTTGATTCAAG+TGG - Chr6:22353373-22353392 MsG0680031562.01.T01:intron 35.0%
!! ATTGGCCATTAATTTGCATC+AGG - Chr6:22352126-22352145 MsG0680031562.01.T01:intron 35.0%
!! CTAGCTTTAAAGATCAGTCT+TGG + Chr6:22352657-22352676 None:intergenic 35.0%
!! GTCTTTCGTTTTATTCTTGG+TGG - Chr6:22351762-22351781 MsG0680031562.01.T01:intron 35.0%
!! TTTTGGGGAAGATTTGTGTT+TGG - Chr6:22350850-22350869 MsG0680031562.01.T01:three_prime_UTR 35.0%
!!! AAAATTCTGGGGTAAGCTTT+TGG - Chr6:22353416-22353435 MsG0680031562.01.T01:intron 35.0%
!!! GTGGTTTTGGGGATAAATTT+GGG - Chr6:22350601-22350620 MsG0680031562.01.T01:three_prime_UTR 35.0%
!!! TGGTTTTGGGGATAAATTTG+GGG - Chr6:22350602-22350621 MsG0680031562.01.T01:three_prime_UTR 35.0%
AAACAAAGGGATCATGATGC+TGG + Chr6:22353488-22353507 None:intergenic 40.0%
AACAAAGGGATCATGATGCT+GGG + Chr6:22353487-22353506 None:intergenic 40.0%
AACCCAATCCCAAATTTAGG+TGG - Chr6:22354418-22354437 MsG0680031562.01.T01:CDS 40.0%
AAGATTAAGAAGCGAAGACC+TGG + Chr6:22350649-22350668 None:intergenic 40.0%
ACCACCAACATGTTTGAGAA+TGG + Chr6:22352211-22352230 None:intergenic 40.0%
ACCATCTGATCAAGAACGAA+TGG - Chr6:22354257-22354276 MsG0680031562.01.T01:CDS 40.0%
ACCATTCGTTCTTGATCAGA+TGG + Chr6:22354261-22354280 None:intergenic 40.0%
AGAACACTGTATTGCATGCA+TGG - Chr6:22352822-22352841 MsG0680031562.01.T01:intron 40.0%
AGAACGGATCACAATTCTTG+CGG + Chr6:22353028-22353047 None:intergenic 40.0%
AGGTCTTCGCTTCTTAATCT+TGG - Chr6:22350648-22350667 MsG0680031562.01.T01:three_prime_UTR 40.0%
ATCCAAACAGGGCCATATAT+TGG - Chr6:22351264-22351283 MsG0680031562.01.T01:intron 40.0%
ATGCAATACAGTGTTCTCGA+TGG + Chr6:22352819-22352838 None:intergenic 40.0%
ATTGCACAAGTAACTAGGGA+AGG + Chr6:22354104-22354123 None:intergenic 40.0%
CAAAGCGAAGACTTAAAGAC+TGG + Chr6:22352280-22352299 None:intergenic 40.0%
CGAAACCCAATCCCAAATTT+AGG - Chr6:22354415-22354434 MsG0680031562.01.T01:CDS 40.0%
CTCTATTCCATGGAGAACTA+TGG - Chr6:22352494-22352513 MsG0680031562.01.T01:intron 40.0%
GAACATTGACACTAGAAGGA+TGG - Chr6:22351475-22351494 MsG0680031562.01.T01:CDS 40.0%
GAGAGCAGATAACTGAATCA+AGG + Chr6:22353911-22353930 None:intergenic 40.0%
GCAAATTGCAAGAGACAACA+AGG + Chr6:22354060-22354079 None:intergenic 40.0%
GCATCAGTGCTGTCAAATAT+CGG - Chr6:22352713-22352732 MsG0680031562.01.T01:intron 40.0%
GGAAGATTTGTGTTTGGTAG+AGG - Chr6:22350856-22350875 MsG0680031562.01.T01:three_prime_UTR 40.0%
GTCGATCCAACAAAATTGTG+AGG - Chr6:22351391-22351410 MsG0680031562.01.T01:intron 40.0%
GTGCAAGTTACTCTATTCCA+TGG - Chr6:22352484-22352503 MsG0680031562.01.T01:intron 40.0%
GTGTATCAGTGGTTTGATGA+TGG + Chr6:22351660-22351679 None:intergenic 40.0%
GTTTCGTTGCAGTCAAAAGT+GGG + Chr6:22354401-22354420 None:intergenic 40.0%
GTTTCTTGTCATGGATAGCA+TGG - Chr6:22353622-22353641 MsG0680031562.01.T01:intron 40.0%
TATAGCTAATACGATGCTGC+AGG + Chr6:22351893-22351912 None:intergenic 40.0%
TCCACCATGGTCAAATATGT+CGG - Chr6:22352768-22352787 MsG0680031562.01.T01:intron 40.0%
TCCATTCTCAAACATGTTGG+TGG - Chr6:22352207-22352226 MsG0680031562.01.T01:intron 40.0%
TCTCTTGTGTGCCATAGAAT+TGG - Chr6:22352108-22352127 MsG0680031562.01.T01:intron 40.0%
TGAAGCGTATGAGGTTCTTA+TGG - Chr6:22350383-22350402 MsG0680031562.01.T01:three_prime_UTR 40.0%
TGATCAAGAACGAATGGTTC+AGG - Chr6:22354263-22354282 MsG0680031562.01.T01:CDS 40.0%
TGCAACAATTCGATTCAAGC+AGG - Chr6:22350356-22350375 MsG0680031562.01.T01:three_prime_UTR 40.0%
TGCTTTCTCAATGGTGTTCA+TGG + Chr6:22353855-22353874 None:intergenic 40.0%
TTCTCAGCGTCAAATAAGTC+TGG - Chr6:22352430-22352449 MsG0680031562.01.T01:intron 40.0%
TTCTTGATCAGATGGTTCAG+AGG + Chr6:22354253-22354272 None:intergenic 40.0%
TTCTTGGCCAGAGCTATATT+AGG - Chr6:22353346-22353365 MsG0680031562.01.T01:intron 40.0%
TTGCAATTTGCCTCACTAAG+TGG - Chr6:22354069-22354088 MsG0680031562.01.T01:intron 40.0%
TTGCACAAGTAACTAGGGAA+GGG + Chr6:22354103-22354122 None:intergenic 40.0%
TTGTCTCACTTGTGCATGTT+AGG + Chr6:22351963-22351982 None:intergenic 40.0%
! AAGTCTTATCCCACTAACTG+GGG + Chr6:22350770-22350789 None:intergenic 40.0%
! ACAAGTCTTATCCCACTAAC+TGG + Chr6:22350772-22350791 None:intergenic 40.0%
! ATGAGAAGCACACATGCTAT+AGG + Chr6:22350957-22350976 None:intergenic 40.0%
! CAAGTCTTATCCCACTAACT+GGG + Chr6:22350771-22350790 None:intergenic 40.0%
! GCAGTCTCGATTTTGTTCTT+AGG + Chr6:22351689-22351708 None:intergenic 40.0%
!! AAGGAGTTCTTTAAAGCCAG+TGG + Chr6:22353227-22353246 None:intergenic 40.0%
!! AGTTCTTTAAAGCCAGTGGT+GGG + Chr6:22353223-22353242 None:intergenic 40.0%
!!! AGTTTTGGGGATTGATTGCA+TGG - Chr6:22353993-22354012 MsG0680031562.01.T01:intron 40.0%
!!! GGTGGTTTTGGGGATAAATT+TGG - Chr6:22350600-22350619 MsG0680031562.01.T01:three_prime_UTR 40.0%
AACGATGCACATACTTCCCA+AGG + Chr6:22351445-22351464 None:intergenic 45.0%
AACTAGCAGAGTTGAGCCTA+AGG + Chr6:22351519-22351538 None:intergenic 45.0%
AGTCACGCTGTCGTAGATTT+AGG - Chr6:22354177-22354196 MsG0680031562.01.T01:CDS 45.0%
AGTCCGATCTTGATCGTGTT+CGG - Chr6:22354340-22354359 MsG0680031562.01.T01:CDS 45.0%
AGTTGAGCCTAAGGAGCTAA+AGG + Chr6:22351510-22351529 None:intergenic 45.0%
CAAACAGGGCCATATATTGG+AGG - Chr6:22351267-22351286 MsG0680031562.01.T01:intron 45.0%
CAATACAGTGTTCTCGATGG+CGG + Chr6:22352816-22352835 None:intergenic 45.0%
CAGAGCTATATTAGGTGCGA+TGG - Chr6:22353354-22353373 MsG0680031562.01.T01:intron 45.0%
CATCGCACCTAATATAGCTC+TGG + Chr6:22353356-22353375 None:intergenic 45.0%
CTCCAATATATGGCCCTGTT+TGG + Chr6:22351269-22351288 None:intergenic 45.0%
CTGAGTTTAATTACCGCTGG+CGG - Chr6:22350421-22350440 MsG0680031562.01.T01:three_prime_UTR 45.0%
CTGTCGTAGATTTAGGGGAT+TGG - Chr6:22354184-22354203 MsG0680031562.01.T01:CDS 45.0%
GATATGGTAGAAGTGGGAGT+GGG - Chr6:22350523-22350542 MsG0680031562.01.T01:three_prime_UTR 45.0%
GGTTTCGTTGCAGTCAAAAG+TGG + Chr6:22354402-22354421 None:intergenic 45.0%
GTCACGCTGTCGTAGATTTA+GGG - Chr6:22354178-22354197 MsG0680031562.01.T01:CDS 45.0%
GTGCTGAGTTTAATTACCGC+TGG - Chr6:22350418-22350437 MsG0680031562.01.T01:three_prime_UTR 45.0%
GTGGTTTGATGAGGATCTGA+TGG - Chr6:22354437-22354456 MsG0680031562.01.T01:CDS 45.0%
GTTGAGCCTAAGGAGCTAAA+GGG + Chr6:22351509-22351528 None:intergenic 45.0%
TCACAATTCTTGCGGATGAC+CGG + Chr6:22353020-22353039 None:intergenic 45.0%
TCACGCTGTCGTAGATTTAG+GGG - Chr6:22354179-22354198 MsG0680031562.01.T01:CDS 45.0%
TCCGACATATTTGACCATGG+TGG + Chr6:22352772-22352791 None:intergenic 45.0%
TGAGTTTAATTACCGCTGGC+GGG - Chr6:22350422-22350441 MsG0680031562.01.T01:three_prime_UTR 45.0%
TGATTGTCATGCAACAGTCG+AGG - Chr6:22354498-22354517 MsG0680031562.01.T01:CDS 45.0%
TTCACATTCTCTGCGAATCG+AGG - Chr6:22351551-22351570 MsG0680031562.01.T01:intron 45.0%
! GTGAGCCCTCACAATTTTGT+TGG + Chr6:22351400-22351419 None:intergenic 45.0%
!! AACGTGAAGAAGCATTCGAG+TGG + Chr6:22353945-22353964 None:intergenic 45.0%
!! ATATCGGCCATGGTGGATAT+CGG - Chr6:22352729-22352748 MsG0680031562.01.T01:intron 45.0%
!! GAGTTCTTTAAAGCCAGTGG+TGG + Chr6:22353224-22353243 None:intergenic 45.0%
!! TTATTCGGATTTTGACGGCC+AGG - Chr6:22350628-22350647 MsG0680031562.01.T01:three_prime_UTR 45.0%
ATAGTTACCGGCACTTCCAC+CGG + Chr6:22350478-22350497 None:intergenic 50.0%
CATTCGAGTGGCAAGTGAAG+CGG + Chr6:22353933-22353952 None:intergenic 50.0%
CGATCTTGATCGTGTTCGGA+CGG - Chr6:22354344-22354363 MsG0680031562.01.T01:CDS 50.0%
CGTCCGAACACGATCAAGAT+CGG + Chr6:22354346-22354365 None:intergenic 50.0%
CTGGCCAAGAATCTTCCATC+AGG + Chr6:22353337-22353356 None:intergenic 50.0%
CTGTCAAATATCGGCCATGG+TGG - Chr6:22352722-22352741 MsG0680031562.01.T01:intron 50.0%
CTTATCCCACTAACTGGGGT+CGG + Chr6:22350766-22350785 None:intergenic 50.0%
GGAAGAGAGACCACTTAGTG+AGG + Chr6:22354082-22354101 None:intergenic 50.0%
GGATATGGTAGAAGTGGGAG+TGG - Chr6:22350522-22350541 MsG0680031562.01.T01:three_prime_UTR 50.0%
GGGAGTGGGAGTGGTTATTA+TGG - Chr6:22350549-22350568 MsG0680031562.01.T01:three_prime_UTR 50.0%
GGGTGTAGTCATCATGCAGT+CGG + Chr6:22354381-22354400 None:intergenic 50.0%
GTGCTGTCAAATATCGGCCA+TGG - Chr6:22352719-22352738 MsG0680031562.01.T01:intron 50.0%
TAAGGAGCTAAAGGGCGAGT+CGG + Chr6:22351501-22351520 None:intergenic 50.0%
TATGGTAGAAGTGGGTCTGC+TGG - Chr6:22350567-22350586 MsG0680031562.01.T01:three_prime_UTR 50.0%
TCTCTGCGAATCGAGGCTAA+AGG - Chr6:22351558-22351577 MsG0680031562.01.T01:intron 50.0%
!! GCAGGTTTCTGAAGCGTATG+AGG - Chr6:22350374-22350393 MsG0680031562.01.T01:three_prime_UTR 50.0%
!! TGGATATCGGTGGCGGTTTT+TGG - Chr6:22352742-22352761 MsG0680031562.01.T01:intron 50.0%
!!! CGGTTTTTGGCTTTCCACCA+TGG - Chr6:22352755-22352774 MsG0680031562.01.T01:intron 50.0%
!!! GGAATTTTGGCTCTCAGCCA+TGG - Chr6:22352789-22352808 MsG0680031562.01.T01:intron 50.0%
ACTAACTGGGGTCGGCTACA+TGG + Chr6:22350758-22350777 None:intergenic 55.0%
ATGTAGCCGACCCCAGTTAG+TGG - Chr6:22350757-22350776 MsG0680031562.01.T01:three_prime_UTR 55.0%
CAATTCTTGCGGATGACCGG+TGG + Chr6:22353017-22353036 None:intergenic 55.0%
GCAGCATCACATTGCACCAC+CGG - Chr6:22352998-22353017 MsG0680031562.01.T01:intron 55.0%
GGGATCATGATGCTGGGATG+TGG + Chr6:22353481-22353500 None:intergenic 55.0%
GTAGAAGTGGGAGTGGGAGT+GGG - Chr6:22350529-22350548 MsG0680031562.01.T01:three_prime_UTR 55.0%
TGTAGCCGACCCCAGTTAGT+GGG - Chr6:22350758-22350777 MsG0680031562.01.T01:three_prime_UTR 55.0%
TGTGAGGGAAGTGAGGCAGA+CGG + Chr6:22352371-22352390 None:intergenic 55.0%
! GACTCGCCCTTTAGCTCCTT+AGG - Chr6:22351500-22351519 MsG0680031562.01.T01:intron 55.0%
! TTTAATTACCGCTGGCGGGC+AGG - Chr6:22350426-22350445 MsG0680031562.01.T01:three_prime_UTR 55.0%
!!! GTGGTGGTGGTGGTGGTTTT+GGG - Chr6:22350589-22350608 MsG0680031562.01.T01:three_prime_UTR 55.0%
!!! TGGTGGTGGTGGTGGTTTTG+GGG - Chr6:22350590-22350609 MsG0680031562.01.T01:three_prime_UTR 55.0%
ACCGCCACCGATATCCACCA+TGG + Chr6:22352739-22352758 None:intergenic 60.0%
AGAAGTGGGTCTGCTGGTGG+TGG - Chr6:22350573-22350592 MsG0680031562.01.T01:three_prime_UTR 60.0%
GGTAGAAGTGGGAGTGGGAG+TGG - Chr6:22350528-22350547 MsG0680031562.01.T01:three_prime_UTR 60.0%
GGTAGAAGTGGGTCTGCTGG+TGG - Chr6:22350570-22350589 MsG0680031562.01.T01:three_prime_UTR 60.0%
GTGAGGGAAGTGAGGCAGAC+GGG + Chr6:22352370-22352389 None:intergenic 60.0%
!! GCCATGGTGGATATCGGTGG+CGG - Chr6:22352735-22352754 MsG0680031562.01.T01:intron 60.0%
!! GTGTTCTCGATGGCGGACCA+TGG + Chr6:22352809-22352828 None:intergenic 60.0%
!! TCGGCCATGGTGGATATCGG+TGG - Chr6:22352732-22352751 MsG0680031562.01.T01:intron 60.0%
!!! GGTGGTGGTGGTGGTGGTTT+TGG - Chr6:22350588-22350607 MsG0680031562.01.T01:three_prime_UTR 60.0%
AGTGGGAGTGGGAGTGGGAG+TGG - Chr6:22350534-22350553 MsG0680031562.01.T01:three_prime_UTR 65.0%
GTGGGAGTGGGAGTGGGAGT+GGG - Chr6:22350535-22350554 MsG0680031562.01.T01:three_prime_UTR 65.0%
! AATTACCGCTGGCGGGCAGG+TGG - Chr6:22350429-22350448 MsG0680031562.01.T01:three_prime_UTR 65.0%
!! AGTGGGTCTGCTGGTGGTGG+TGG - Chr6:22350576-22350595 MsG0680031562.01.T01:three_prime_UTR 65.0%
!! GGTGGTGGTGGAGGAAGTGC+CGG - Chr6:22350447-22350466 MsG0680031562.01.T01:three_prime_UTR 65.0%
!! TCTGCTGGTGGTGGTGGTGG+TGG - Chr6:22350582-22350601 MsG0680031562.01.T01:three_prime_UTR 65.0%
GGCACTTCCACCGGCAGCAC+CGG + Chr6:22350469-22350488 None:intergenic 70.0%
! GGTGCTGCCGGTGGAAGTGC+CGG - Chr6:22350468-22350487 MsG0680031562.01.T01:three_prime_UTR 70.0%
!! GGAGGAAGTGCCGGTGCTGC+CGG - Chr6:22350456-22350475 MsG0680031562.01.T01:three_prime_UTR 70.0%
!! GGGTCTGCTGGTGGTGGTGG+TGG - Chr6:22350579-22350598 MsG0680031562.01.T01:three_prime_UTR 70.0%
CACCACCACCTGCCCGCCAG+CGG + Chr6:22350437-22350456 None:intergenic 75.0%
! TACCGCTGGCGGGCAGGTGG+TGG - Chr6:22350432-22350451 MsG0680031562.01.T01:three_prime_UTR 75.0%
!! GGAAGTGCCGGTGCTGCCGG+TGG - Chr6:22350459-22350478 MsG0680031562.01.T01:three_prime_UTR 75.0%
!! TGGCGGGCAGGTGGTGGTGG+AGG - Chr6:22350438-22350457 MsG0680031562.01.T01:three_prime_UTR 75.0%
!! CGCTGGCGGGCAGGTGGTGG+TGG - Chr6:22350435-22350454 MsG0680031562.01.T01:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
Chr6 gene 22350225 22354629 22350225 ID=MsG0680031562.01;Name=MsG0680031562.01
Chr6 mRNA 22350225 22354629 22350225 ID=MsG0680031562.01.T01;Parent=MsG0680031562.01;Name=MsG0680031562.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0.5|0.33|1|1|1|3|716|200
Chr6 exon 22350225 22351018 22350225 ID=MsG0680031562.01.T01:exon:14079;Parent=MsG0680031562.01.T01
Chr6 exon 22351428 22351497 22351428 ID=MsG0680031562.01.T01:exon:14078;Parent=MsG0680031562.01.T01
Chr6 exon 22354175 22354629 22354175 ID=MsG0680031562.01.T01:exon:14077;Parent=MsG0680031562.01.T01
Chr6 CDS 22354175 22354629 22354175 ID=MsG0680031562.01.T01:cds;Parent=MsG0680031562.01.T01
Chr6 CDS 22351428 22351497 22351428 ID=MsG0680031562.01.T01:cds;Parent=MsG0680031562.01.T01
Chr6 CDS 22350941 22351018 22350941 ID=MsG0680031562.01.T01:cds;Parent=MsG0680031562.01.T01
Chr6 three_prime_UTR 22350225 22350940 22350225 ID=MsG0680031562.01.T01:three_prime_utr;Parent=MsG0680031562.01.T01
Gene Sequence

>MsG0680031562.01.T01

ATGGATCATTACAAGGTTCTAGGGTTACACAAAACAGCATCAAAAGAAGAAATCAAAATCGCATTCAAGAAATTGGCGTTTCAATTTCATCCAGATAAGCATTCTCAATCATCTAAATCCGTTAGAGAAAATGCAACAATTCGATTCAAGCAGGTTTCTGAAGCGTATGAGGTTCTTATGGATGATCGGAAACGTGCTGAGTTTAATTACCGCTGGCGGGCAGGTGGTGGTGGAGGAAGTGCCGGTGCTGCCGGTGGAAGTGCCGGTAACTATTATTACCAATCTCAGTATAGTTATGGATATGGTAGAAGTGGGAGTGGGAGTGGGAGTGGGAGTGGTTATTATGGTAGAAGTGGGTCTGCTGGTGGTGGTGGTGGTGGTTTTGGGGATAAATTTGGGGTTTTTATTCGGATTTTGACGGCCAGGTCTTCGCTTCTTAATCTTGGATTCGCAGCAGCTATATTAGGTGCGATGGTTGTTGTTGATTCAAGTGGAGAATCTTTATGGAAGATGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATGAACACCATTGAGAAAGCAAAAGTGTATAAAAAAGATAACACGAATGAACATCCTTGA

Protein sequence

>MsG0680031562.01.T01

MDHYKVLGLHKTASKEEIKIAFKKLAFQFHPDKHSQSSKSVRENATIRFKQVSEAYEVLMDDRKRAEFNYRWRAGGGGGSAGAAGGSAGNYYYQSQYSYGYGRSGSGSGSGSGYYGRSGSAGGGGGGFGDKFGVFIRILTARSSLLNLGFAAAILGAMVVVDSSGESLWKMQNSGKSFEEAMNTIEKAKVYKKDNTNEHP*