AlfalfaGEDB | MsG0480018390.01

M. sativa cultivar ZhongmuNo.1 / MsG0480018390.01

KEGG: K01462
GO: -
PFAM: PF01327

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018390.01.T01	XP_013454668.1	95.167	269	11	1	1	269	1	267	2.09E-168	476

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018390.01.T01	Q9FUZ0	67.965	231	66	2	37	267	53	275	2.58E-110	322

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018390.01.T01	A0A072UG23	95.167	269	11	1	1	269	1	267	9.96e-169	476

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048072.01	MsG0480018390.01	0.806968	6.356639e-50	3.497555e-47
MsG0080048281.01	MsG0480018390.01	0.812691	3.732381e-51	2.389042e-48
MsG0080048754.01	MsG0480018390.01	0.827169	1.815248e-54	1.738726e-51
MsG0080048978.01	MsG0480018390.01	0.816624	5.023337e-52	3.577605e-49
MsG0080049066.01	MsG0480018390.01	0.834082	3.682007e-56	4.322821e-53
MsG0180001111.01	MsG0480018390.01	0.833408	5.426119e-56	6.243283e-53
MsG0180002214.01	MsG0480018390.01	0.815610	8.462428e-52	5.862575e-49
MsG0180003757.01	MsG0480018390.01	0.805835	1.102064e-49	5.890334e-47
MsG0180003779.01	MsG0480018390.01	0.819957	8.841768e-53	6.903428e-50
MsG0180004491.01	MsG0480018390.01	-0.820733	5.869394e-53	4.682063e-50
MsG0180005817.01	MsG0480018390.01	0.887004	2.087311e-72	1.525376e-68
MsG0180006212.01	MsG0480018390.01	0.803060	4.174277e-49	2.077308e-46
MsG0280011299.01	MsG0480018390.01	0.886665	2.805970e-72	2.023116e-68
MsG0280011403.01	MsG0480018390.01	-0.830461	2.898477e-55	3.055509e-52
MsG0380012281.01	MsG0480018390.01	0.827670	1.376373e-54	1.337678e-51
MsG0380013272.01	MsG0480018390.01	-0.800691	1.279860e-48	5.997595e-46
MsG0380013378.01	MsG0480018390.01	0.830468	2.887069e-55	3.044196e-52
MsG0380015111.01	MsG0480018390.01	0.808812	2.576818e-50	1.487796e-47
MsG0380015271.01	MsG0480018390.01	0.805399	1.360385e-49	7.189798e-47
MsG0380015619.01	MsG0480018390.01	0.818068	2.377446e-52	1.761434e-49
MsG0380015752.01	MsG0480018390.01	0.830957	2.191515e-55	2.344422e-52
MsG0380015971.01	MsG0480018390.01	0.854487	1.191051e-61	2.664331e-58
MsG0380016056.01	MsG0480018390.01	0.812898	3.363255e-51	2.164424e-48
MsG0380016424.01	MsG0480018390.01	0.825711	4.038053e-54	3.709366e-51
MsG0380016931.01	MsG0480018390.01	0.834026	3.801572e-56	4.455901e-53
MsG0380017895.01	MsG0480018390.01	0.800886	1.167657e-48	5.499370e-46
MsG0380017962.01	MsG0480018390.01	0.800293	1.542633e-48	7.156749e-46
MsG0380018058.01	MsG0480018390.01	0.819105	1.382691e-52	1.054258e-49
MsG0480018112.01	MsG0480018390.01	0.803928	2.758592e-49	1.403904e-46
MsG0480018390.01	MsG0480018463.01	0.847031	1.495036e-59	2.622793e-56
MsG0480018390.01	MsG0480018626.01	0.843851	1.086375e-58	1.722053e-55
MsG0480018390.01	MsG0480019726.01	-0.803838	2.880091e-49	1.462313e-46
MsG0480018390.01	MsG0480019836.01	0.872559	2.897078e-67	1.217890e-63
MsG0480018390.01	MsG0480019838.01	0.856394	3.313809e-62	7.898418e-59
MsG0480018390.01	MsG0480019954.01	-0.813579	2.383645e-51	1.562598e-48
MsG0480018390.01	MsG0480021205.01	0.816783	4.628207e-52	3.310629e-49
MsG0480018390.01	MsG0480021553.01	-0.800179	1.626950e-48	7.525785e-46
MsG0480018390.01	MsG0480021912.01	0.816510	5.329264e-52	3.783491e-49
MsG0480018390.01	MsG0480023480.01	0.800271	1.558373e-48	7.225593e-46
MsG0480018390.01	MsG0480023481.01	0.825318	5.003294e-54	4.545041e-51
MsG0480018390.01	MsG0480023482.01	0.809257	2.069625e-50	1.209275e-47
MsG0480018390.01	MsG0480023674.01	0.832839	7.519370e-56	8.505190e-53
MsG0480018390.01	MsG0480023717.01	0.845535	3.822294e-59	6.389641e-56
MsG0480018390.01	MsG0580024260.01	-0.806674	7.333875e-50	4.004566e-47
MsG0480018390.01	MsG0580024678.01	0.813342	2.686721e-51	1.749983e-48
MsG0480018390.01	MsG0580024999.01	-0.810739	9.921059e-51	6.028760e-48
MsG0480018390.01	MsG0580028924.01	-0.805640	1.210868e-49	6.439499e-47
MsG0480018390.01	MsG0580029583.01	-0.813860	2.066772e-51	1.365197e-48
MsG0480018390.01	MsG0680030635.01	0.820367	7.119492e-53	5.622368e-50
MsG0480018390.01	MsG0680030961.01	-0.817760	2.790292e-52	2.050105e-49
MsG0480018390.01	MsG0680035841.01	-0.838980	2.082578e-57	2.835864e-54
MsG0480018390.01	MsG0780037751.01	-0.833781	4.379345e-56	5.095606e-53
MsG0480018390.01	MsG0780038857.01	-0.822046	2.920231e-53	2.416917e-50
MsG0480018390.01	MsG0780039702.01	-0.804648	1.952791e-49	1.012345e-46
MsG0480018390.01	MsG0780040121.01	0.808384	3.180787e-50	1.816187e-47
MsG0480018390.01	MsG0780040283.01	0.805314	1.416918e-49	7.472487e-47
MsG0480018390.01	MsG0780040481.01	-0.824031	1.005869e-53	8.806674e-51
MsG0480018390.01	MsG0780040621.01	-0.803281	3.756576e-49	1.880110e-46
MsG0480018390.01	MsG0780041014.01	0.821774	3.376044e-53	2.772787e-50
MsG0480018390.01	MsG0780041079.01	-0.820483	6.699084e-53	5.307085e-50
MsG0480018390.01	MsG0780041106.01	0.813615	2.339558e-51	1.535241e-48
MsG0480018390.01	MsG0780041173.01	0.851880	6.650654e-61	1.365056e-57
MsG0480018390.01	MsG0780041254.01	0.814938	1.194154e-51	8.121124e-49
MsG0480018390.01	MsG0780041625.01	0.800784	1.225023e-48	5.754094e-46
MsG0480018390.01	MsG0780041637.01	0.817192	3.745246e-52	2.709089e-49
MsG0480018390.01	MsG0780041720.01	0.821997	2.997771e-53	2.477724e-50
MsG0480018390.01	MsG0780041783.01	0.817020	4.094413e-52	2.947983e-49
MsG0480018390.01	MsG0780041809.01	0.800068	1.714434e-48	7.908173e-46
MsG0480018390.01	MsG0880043185.01	-0.818724	1.688545e-52	1.273916e-49
MsG0480018390.01	MsG0880044339.01	0.851235	1.012514e-60	2.036012e-57
MsG0480018390.01	MsG0880045256.01	-0.806610	7.565011e-50	4.124074e-47
MsG0480018390.01	MsG0880045683.01	-0.832568	8.777927e-56	9.849498e-53
MsG0480018390.01	MsG0880045968.01	0.808959	2.396406e-50	1.389070e-47
MsG0480018390.01	MsG0880046167.01	0.846630	1.925515e-59	3.334925e-56
MsG0480018390.01	MsG0880046219.01	0.809149	2.181906e-50	1.271254e-47
MsG0480018390.01	MsG0880046251.01	0.856300	3.532152e-62	8.390711e-59
MsG0480018390.01	MsG0880047318.01	0.819068	1.409800e-52	1.073814e-49
MsG0280007052.01	MsG0480018390.01	-0.817230	3.672677e-52	2.659350e-49
MsG0280008863.01	MsG0480018390.01	0.853553	2.214818e-61	4.804031e-58
MsG0280009579.01	MsG0480018390.01	0.834811	2.415325e-56	2.898298e-53
MsG0280010296.01	MsG0480018390.01	-0.802833	4.650466e-49	2.301232e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018390.01.T01	MTR_4g011040	95.167	269	11	1	1	269	1	267	2.53e-172	476
MsG0480018390.01.T01	MTR_2g103430	68.201	239	56	2	31	269	38	256	4.61e-110	318
MsG0480018390.01.T01	MTR_2g103420	67.725	189	61	0	74	262	72	260	2.69e-88	264
MsG0480018390.01.T01	MTR_7g035310	30.556	216	117	5	42	252	28	215	3.36e-24	97.4
MsG0480018390.01.T01	MTR_7g035310	30.556	216	117	5	42	252	28	215	4.94e-24	97.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018390.01.T01	AT1G15390	72.170	212	54	1	58	269	63	269	4.84e-111	321
MsG0480018390.01.T01	AT5G14660	34.320	169	94	3	84	252	84	235	1.18e-23	97.1
MsG0480018390.01.T01	AT5G14660	34.320	169	94	3	84	252	84	235	1.18e-23	97.1
MsG0480018390.01.T01	AT5G14660	34.320	169	94	3	84	252	84	235	1.18e-23	97.1

Find 90 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCACGATAAGGGTGGGTTTA+TGG	0.136478	4:-4240886	None:intergenic
TTGTTCTGTTTATTCTTCTA+TGG	0.194919	4:-4240862	None:intergenic
GCCCTCGGTAACGCATGTTT+TGG	0.233533	4:+4244570	MsG0480018390.01.T01:exon
CTCAGATTGGAGTTTCTTCT+AGG	0.243478	4:+4241323	MsG0480018390.01.T01:CDS
GAAAATGGTGATAGAGATAA+TGG	0.253015	4:-4241022	None:intergenic
GGCATAACTAATAAATTCTT+TGG	0.259044	4:-4243350	None:intergenic
CACTATGCAGATAATTGTTT+TGG	0.265370	4:+4243321	MsG0480018390.01.T01:intron
TTTCCATGATAAGTCGTTTC+AGG	0.267339	4:+4244778	MsG0480018390.01.T01:three_prime_UTR
CACCTTGACGTTGAAGTTAC+AGG	0.267498	4:+4244371	MsG0480018390.01.T01:CDS
GATGATAAGGTTAAAGTTAA+TGG	0.268448	4:-4241055	None:intergenic
GAGCTATGAGCACTTCCTTT+GGG	0.276369	4:-4243372	None:intergenic
GTTACCGAGGGCCAAGTTTC+GGG	0.283852	4:-4244559	None:intergenic
TCTACGGTTCTGAAAGTTCT+AGG	0.285952	4:-4244506	None:intergenic
CACGATAAGGGTGGGTTTAT+GGG	0.287396	4:-4240885	None:intergenic
TTCAGTGTTAAATATTATAC+TGG	0.295687	4:+4244806	MsG0480018390.01.T01:three_prime_UTR
AAATTATTGATGATATGATT+AGG	0.316488	4:+4241263	MsG0480018390.01.T01:CDS
ATTTCTAAAATATTTGAATC+TGG	0.326035	4:-4244683	None:intergenic
CACATTCATGTTGTAAAATC+CGG	0.342414	4:-4244445	None:intergenic
CCAATCAAAATAACTGCTTC+TGG	0.342745	4:+4244413	MsG0480018390.01.T01:CDS
TCACCAGCTTTAACAGTATC+AGG	0.343078	4:-4241175	None:intergenic
CGTTACCGAGGGCCAAGTTT+CGG	0.344854	4:-4244560	None:intergenic
AATTATTGATGATATGATTA+GGG	0.344880	4:+4241264	MsG0480018390.01.T01:CDS
TGAGCTATGAGCACTTCCTT+TGG	0.361255	4:-4243373	None:intergenic
ATTCTTCTATGGAACACAAT+AGG	0.366896	4:-4240851	None:intergenic
CTGCTTCTGGTTGGCAGGCC+CGG	0.375678	4:+4244426	MsG0480018390.01.T01:CDS
CATGGACCTGCCTCTTGCTC+AGG	0.377726	4:+4244532	MsG0480018390.01.T01:CDS
TATAATGCAATGACATAATT+CGG	0.379896	4:-4244748	None:intergenic
GGTTTAGCTGCTCCTCAGAT+TGG	0.386408	4:+4241310	MsG0480018390.01.T01:CDS
TTGAGAAGATGAAGATGATA+AGG	0.388406	4:-4241068	None:intergenic
TGAGCAGGTTCATGAAGAAC+AGG	0.394698	4:-4241199	None:intergenic
TTTGCTCGTACTCTTCAGCC+TGG	0.404432	4:-4243545	None:intergenic
TGACGTTGAAGTTACAGGTT+TGG	0.412939	4:+4244376	MsG0480018390.01.T01:CDS
TCTGTAAGAAAATCACGATA+AGG	0.419805	4:-4240898	None:intergenic
AAAATGGTGATAGAGATAAT+GGG	0.423760	4:-4241021	None:intergenic
ATGATATGATTAGGGTTATG+AGG	0.426883	4:+4241272	MsG0480018390.01.T01:CDS
GAAACGACTTATCATGGAAA+AGG	0.427241	4:-4244775	None:intergenic
GCTCAGGGATGCCCGAAACT+TGG	0.436382	4:+4244548	MsG0480018390.01.T01:CDS
CATTGCTGCTGCCTCTGATA+AGG	0.445272	4:+4244595	MsG0480018390.01.T01:three_prime_UTR
TTGCCTGAAACGACTTATCA+TGG	0.447929	4:-4244781	None:intergenic
CTTGCATTAAAGCTGAGAAA+TGG	0.453066	4:-4244872	None:intergenic
AATAACTGCTTCTGGTTGGC+AGG	0.461517	4:+4244421	MsG0480018390.01.T01:CDS
GAACATACCAAAAGATCAAA+AGG	0.463797	4:-4243406	None:intergenic
TCAGATTGGAGTTTCTTCTA+GGG	0.471837	4:+4241324	MsG0480018390.01.T01:CDS
CTATGGAAGCTTTACACTTA+CGG	0.473557	4:+4240942	MsG0480018390.01.T01:CDS
GGCATCCCTGAGCAAGAGGC+AGG	0.481807	4:-4244538	None:intergenic
AACTCTATATGTTGATAAGA+TGG	0.483415	4:+4244481	MsG0480018390.01.T01:CDS
CTAGGATCAACTTCTTGAGC+AGG	0.493700	4:-4241214	None:intergenic
ATGAGGAAAGCTCCTGGTGT+TGG	0.494343	4:+4241289	MsG0480018390.01.T01:CDS
AAGGTTAAAGTTAATGGTGG+GGG	0.496150	4:-4241049	None:intergenic
GGCTGAAGAGTACGAGCAAA+AGG	0.512028	4:+4243548	MsG0480018390.01.T01:CDS
CTGTAAGAAAATCACGATAA+GGG	0.516073	4:-4240897	None:intergenic
TTGCCTGATACTGTTAAAGC+TGG	0.517276	4:+4241172	MsG0480018390.01.T01:CDS
TATTCAGAAAATGAAGGCTA+TGG	0.517748	4:+4240925	MsG0480018390.01.T01:exon
TTGCTCGTACTCTTCAGCCT+GGG	0.529092	4:-4243544	None:intergenic
ATAAGGTTAAAGTTAATGGT+GGG	0.530548	4:-4241051	None:intergenic
AAACGACTTATCATGGAAAA+GGG	0.533289	4:-4244774	None:intergenic
GATAAGGTTAAAGTTAATGG+TGG	0.535661	4:-4241052	None:intergenic
ACAACATGAATGTGATCACT+TGG	0.545261	4:+4244454	MsG0480018390.01.T01:CDS
CATGAATGTGATCACTTGGA+TGG	0.545479	4:+4244458	MsG0480018390.01.T01:CDS
ACATTCATGTTGTAAAATCC+GGG	0.546437	4:-4244444	None:intergenic
GAGAGATATTCAGAAAATGA+AGG	0.546950	4:+4240919	MsG0480018390.01.T01:exon
AGCTATGAGCACTTCCTTTG+GGG	0.558890	4:-4243371	None:intergenic
TCAAAATAACTGCTTCTGGT+TGG	0.559785	4:+4244417	MsG0480018390.01.T01:CDS
TTTCAGAACCGTAGAAAACA+TGG	0.567140	4:+4244514	MsG0480018390.01.T01:CDS
TAAGGTTAAAGTTAATGGTG+GGG	0.574273	4:-4241050	None:intergenic
TCTGATAAGGCTGTCAACAC+AGG	0.580727	4:+4244608	MsG0480018390.01.T01:three_prime_UTR
ATGGACCTGCCTCTTGCTCA+GGG	0.581868	4:+4244533	MsG0480018390.01.T01:CDS
TTCGGGCATCCCTGAGCAAG+AGG	0.582488	4:-4244542	None:intergenic
AAGAAAATCACGATAAGGGT+GGG	0.586340	4:-4240893	None:intergenic
GCTACTATAAGAACAAGGGC+AGG	0.594187	4:+4241094	MsG0480018390.01.T01:CDS
TGCAGGTGATCGTGAATCCC+AGG	0.596578	4:+4243527	MsG0480018390.01.T01:intron
TGATGGATTTAGAGCTGTGG+TGG	0.598884	4:+4244343	MsG0480018390.01.T01:CDS
AGGGTTATGAGGAAAGCTCC+TGG	0.599633	4:+4241283	MsG0480018390.01.T01:CDS
ATTTATTAGTTATGCCCCAA+AGG	0.600743	4:+4243357	MsG0480018390.01.T01:CDS
TTCTCAGACATTATCTCACT+AGG	0.601515	4:-4241232	None:intergenic
TAAGAAAATCACGATAAGGG+TGG	0.602629	4:-4240894	None:intergenic
GATGCCCGAAACTTGGCCCT+CGG	0.604972	4:+4244555	MsG0480018390.01.T01:CDS
TCCCAAAACATGCGTTACCG+AGG	0.605470	4:-4244572	None:intergenic
TGAATATTGTAAAATTGTGA+AGG	0.609490	4:+4240814	None:intergenic
AAACTGCTACTATAAGAACA+AGG	0.612598	4:+4241089	MsG0480018390.01.T01:CDS
AACCTGTAACTTCAACGTCA+AGG	0.623085	4:-4244373	None:intergenic
CCCAAAACATGCGTTACCGA+GGG	0.628580	4:-4244571	None:intergenic
TGTTGATGGATTTAGAGCTG+TGG	0.633917	4:+4244340	MsG0480018390.01.T01:CDS
GTTACAGGTTTGGATCGCAA+TGG	0.637881	4:+4244386	MsG0480018390.01.T01:CDS
AACTGCTACTATAAGAACAA+GGG	0.648022	4:+4241090	MsG0480018390.01.T01:CDS
CTAGAAGAAACTCCAATCTG+AGG	0.652902	4:-4241322	None:intergenic
AAATGGTGATAGAGATAATG+GGG	0.673193	4:-4241020	None:intergenic
GGAGCAGCTAAACCAACACC+AGG	0.676457	4:-4241301	None:intergenic
TGTGTTGACAGCCTTATCAG+AGG	0.687663	4:-4244606	None:intergenic
GAGCAGGTTCATGAAGAACA+GGG	0.696995	4:-4241198	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATACATATATATAATTCAT+TGG	+	Chr4:4243495-4243514	MsG0480018390.01.T01:intron	10.0%
!!!	ATCATTTTATCTTAAATTAT+TGG	-	Chr4:4241875-4241894	None:intergenic	10.0%
!!	AAATTTCTTAGATTAAAAGA+GGG	-	Chr4:4243727-4243746	None:intergenic	15.0%
!!	GATTATTATTTATTGCTTAA+TGG	+	Chr4:4244081-4244100	MsG0480018390.01.T01:intron	15.0%
!!	TATGAATTTATTAAAGTACA+GGG	-	Chr4:4244175-4244194	None:intergenic	15.0%
!!	TCAAATTACTTTCAATTTAT+AGG	-	Chr4:4243281-4243300	None:intergenic	15.0%
!!!	AAATTATTGATGATATGATT+AGG	+	Chr4:4241263-4241282	MsG0480018390.01.T01:CDS	15.0%
!!!	AATTATTGATGATATGATTA+GGG	+	Chr4:4241264-4241283	MsG0480018390.01.T01:CDS	15.0%
!!!	ATTTCTAAAATATTTGAATC+TGG	-	Chr4:4244686-4244705	None:intergenic	15.0%
!!!	TTTGAAATTTAGTTAATTTC+AGG	+	Chr4:4242900-4242919	MsG0480018390.01.T01:intron	15.0%
!!	AATTGAAAGTAATTTGAACT+TGG	+	Chr4:4243284-4243303	MsG0480018390.01.T01:intron	20.0%
!!	ATAACAATTGAACATGTTAA+TGG	-	Chr4:4244306-4244325	None:intergenic	20.0%
!!	ATATGACTGATACATATAAA+AGG	-	Chr4:4242033-4242052	None:intergenic	20.0%
!!	ATTCCGTATTTCAAATTAAT+CGG	-	Chr4:4243966-4243985	None:intergenic	20.0%
!!	CAAATTTCTTAGATTAAAAG+AGG	-	Chr4:4243728-4243747	None:intergenic	20.0%
!!	CTATGAATTTATTAAAGTAC+AGG	-	Chr4:4244176-4244195	None:intergenic	20.0%
!!	TAAAGTTAGTTAACAAAGTT+CGG	+	Chr4:4241601-4241620	MsG0480018390.01.T01:intron	20.0%
!!	TATAATGCAATGACATAATT+CGG	-	Chr4:4244751-4244770	None:intergenic	20.0%
!!	TATTTGAACTTCAATTCAAA+TGG	-	Chr4:4243105-4243124	None:intergenic	20.0%
!!	TTATACTGGAAAAATTTCTT+AGG	+	Chr4:4244820-4244839	MsG0480018390.01.T01:three_prime_UTR	20.0%
!!	TTCAGTGTTAAATATTATAC+TGG	+	Chr4:4244806-4244825	MsG0480018390.01.T01:three_prime_UTR	20.0%
!!!	CTAAACATGTTTTTATAAGT+GGG	-	Chr4:4241479-4241498	None:intergenic	20.0%
!!!	CTTTGAAACAATTGTTTATA+TGG	-	Chr4:4244048-4244067	None:intergenic	20.0%
!!!	TAAACATGTTTTTATAAGTG+GGG	-	Chr4:4241478-4241497	None:intergenic	20.0%
!!!	TATTTGATTTTGAAATTGCA+GGG	+	Chr4:4242199-4242218	MsG0480018390.01.T01:intron	20.0%
!!!	TCTAAACATGTTTTTATAAG+TGG	-	Chr4:4241480-4241499	None:intergenic	20.0%
!!!	TTTTTTCTCTATCACTAAAA+TGG	-	Chr4:4241668-4241687	None:intergenic	20.0%
!	AAAATGGTGATAGAGATAAT+GGG	-	Chr4:4241024-4241043	None:intergenic	25.0%
!	AAGGACTAAATTGACTAAAT+TGG	+	Chr4:4242957-4242976	MsG0480018390.01.T01:intron	25.0%
!	ATAAGGTTAAAGTTAATGGT+GGG	-	Chr4:4241054-4241073	None:intergenic	25.0%
!	CATTGTATGAAATGTCAAAT+TGG	-	Chr4:4244022-4244041	None:intergenic	25.0%
!	CTTCAAATAAAGGAATAAGA+AGG	+	Chr4:4243052-4243071	MsG0480018390.01.T01:intron	25.0%
!	GAAAATTGAAAGTGAATTTG+TGG	+	Chr4:4243218-4243237	MsG0480018390.01.T01:intron	25.0%
!	GAACAAGTAAATGAATAGTT+AGG	-	Chr4:4243662-4243681	None:intergenic	25.0%
!	GATGATAAGGTTAAAGTTAA+TGG	-	Chr4:4241058-4241077	None:intergenic	25.0%
!	GGCATAACTAATAAATTCTT+TGG	-	Chr4:4243353-4243372	None:intergenic	25.0%
!	TAGTGATAGAGAAAAAAGTA+GGG	+	Chr4:4241671-4241690	MsG0480018390.01.T01:intron	25.0%
!	TATCATCATCATCATTATCA+TGG	+	Chr4:4242140-4242159	MsG0480018390.01.T01:intron	25.0%
!	TGAAACAATTGTTTATATGG+AGG	-	Chr4:4244045-4244064	None:intergenic	25.0%
!	TGATCTACTCAATATATTGA+AGG	+	Chr4:4242980-4242999	MsG0480018390.01.T01:intron	25.0%
!	TTAACTAATCCTTACAAAAC+CGG	+	Chr4:4241439-4241458	MsG0480018390.01.T01:intron	25.0%
!	TTAGTCTCATATCAGAAAAA+TGG	-	Chr4:4241503-4241522	None:intergenic	25.0%
!	TTAGTGATAGAGAAAAAAGT+AGG	+	Chr4:4241670-4241689	MsG0480018390.01.T01:intron	25.0%
!	TTCCGTATTTCAAATTAATC+GGG	-	Chr4:4243965-4243984	None:intergenic	25.0%
!	TTGTATGTGAAAGAAAGTAA+TGG	-	Chr4:4244117-4244136	None:intergenic	25.0%
!	TTGTTCTGTTTATTCTTCTA+TGG	-	Chr4:4240865-4240884	None:intergenic	25.0%
!!	AACTCTATATGTTGATAAGA+TGG	+	Chr4:4244481-4244500	MsG0480018390.01.T01:CDS	25.0%
!!	CATAGTAGTTTGATAATTTC+CGG	+	Chr4:4244191-4244210	MsG0480018390.01.T01:intron	25.0%
!!	GATGTAAATATGGTTTTTGA+TGG	+	Chr4:4242699-4242718	MsG0480018390.01.T01:intron	25.0%
!!	TAATGAGTTGGATGTAAATA+TGG	+	Chr4:4242689-4242708	MsG0480018390.01.T01:intron	25.0%
!!	TACTTTGTAATCTAAGACAT+AGG	-	Chr4:4241636-4241655	None:intergenic	25.0%
!!	TTATTCCTTTATTTGAAGTG+TGG	-	Chr4:4243050-4243069	None:intergenic	25.0%
!!	TTCCCGATTAATTTGAAATA+CGG	+	Chr4:4243960-4243979	MsG0480018390.01.T01:intron	25.0%
!!!	AAACATGTTTTTATAAGTGG+GGG	-	Chr4:4241477-4241496	None:intergenic	25.0%
!!!	ATATCATGATTTGTCCTTTT+CGG	+	Chr4:4243602-4243621	MsG0480018390.01.T01:intron	25.0%
!!!	CTATTTGATTTTGAAATTGC+AGG	+	Chr4:4242198-4242217	MsG0480018390.01.T01:intron	25.0%
!!!	TACTTTTTGTCGTAAAGTTT+CGG	+	Chr4:4243466-4243485	MsG0480018390.01.T01:intron	25.0%
!!!	TTGTACTAGTCTTTTTGAAT+AGG	+	Chr4:4242789-4242808	MsG0480018390.01.T01:intron	25.0%
	AAAAATTTCTTAGGTCTGCA+AGG	+	Chr4:4244829-4244848	MsG0480018390.01.T01:three_prime_UTR	30.0%
	AAACGACTTATCATGGAAAA+GGG	-	Chr4:4244777-4244796	None:intergenic	30.0%
	AAACTGCTACTATAAGAACA+AGG	+	Chr4:4241089-4241108	MsG0480018390.01.T01:CDS	30.0%
	AAATGGTGATAGAGATAATG+GGG	-	Chr4:4241023-4241042	None:intergenic	30.0%
	AACTGCTACTATAAGAACAA+GGG	+	Chr4:4241090-4241109	MsG0480018390.01.T01:CDS	30.0%
	ACATTCATGTTGTAAAATCC+GGG	-	Chr4:4244447-4244466	None:intergenic	30.0%
	AGCATAAGCAGATTAATTTC+CGG	-	Chr4:4244213-4244232	None:intergenic	30.0%
	ATAATTCGGCATACAAAATG+AGG	-	Chr4:4244737-4244756	None:intergenic	30.0%
	ATGATATGATTAGGGTTATG+AGG	+	Chr4:4241272-4241291	MsG0480018390.01.T01:CDS	30.0%
	ATTAAACGTAACCATATGAG+GGG	+	Chr4:4241893-4241912	MsG0480018390.01.T01:intron	30.0%
	ATTCTTCTATGGAACACAAT+AGG	-	Chr4:4240854-4240873	None:intergenic	30.0%
	ATTTATTAGTTATGCCCCAA+AGG	+	Chr4:4243357-4243376	MsG0480018390.01.T01:CDS	30.0%
	CAAATTAATCGGGAAAAAGT+GGG	-	Chr4:4243955-4243974	None:intergenic	30.0%
	CACATTCATGTTGTAAAATC+CGG	-	Chr4:4244448-4244467	None:intergenic	30.0%
	CCATATGAAAAAGACTAGTA+TGG	-	Chr4:4242292-4242311	None:intergenic	30.0%
	CTGTAAGAAAATCACGATAA+GGG	-	Chr4:4240900-4240919	None:intergenic	30.0%
	GAAAATGGTGATAGAGATAA+TGG	-	Chr4:4241025-4241044	None:intergenic	30.0%
	GAACATACCAAAAGATCAAA+AGG	-	Chr4:4243409-4243428	None:intergenic	30.0%
	GAGAGATATTCAGAAAATGA+AGG	+	Chr4:4240919-4240938	MsG0480018390.01.T01:exon	30.0%
	GATAAGGTTAAAGTTAATGG+TGG	-	Chr4:4241055-4241074	None:intergenic	30.0%
	GATTAAACGTAACCATATGA+GGG	+	Chr4:4241892-4241911	MsG0480018390.01.T01:intron	30.0%
	GCTTATGACAACTATAATGT+TGG	+	Chr4:4243196-4243215	MsG0480018390.01.T01:intron	30.0%
	TAAGGTTAAAGTTAATGGTG+GGG	-	Chr4:4241053-4241072	None:intergenic	30.0%
	TATTCAGAAAATGAAGGCTA+TGG	+	Chr4:4240925-4240944	MsG0480018390.01.T01:exon	30.0%
	TCAAATTAATCGGGAAAAAG+TGG	-	Chr4:4243956-4243975	None:intergenic	30.0%
	TCAATATATTGAAGGAGCTA+AGG	+	Chr4:4242988-4243007	MsG0480018390.01.T01:intron	30.0%
	TCAGAGACGAGATAATTTAA+GGG	-	Chr4:4242828-4242847	None:intergenic	30.0%
	TCTGTAAGAAAATCACGATA+AGG	-	Chr4:4240901-4240920	None:intergenic	30.0%
	TGAGAATGCTCTACAATTTA+AGG	+	Chr4:4242938-4242957	MsG0480018390.01.T01:intron	30.0%
	TGATTAAACGTAACCATATG+AGG	+	Chr4:4241891-4241910	MsG0480018390.01.T01:intron	30.0%
	TGTTACCACACTTCAAATAA+AGG	+	Chr4:4243042-4243061	MsG0480018390.01.T01:intron	30.0%
	TTAATCTGCTTATGCTTAGA+TGG	+	Chr4:4244217-4244236	MsG0480018390.01.T01:intron	30.0%
	TTACTTGTGTTGTCTAATAG+CGG	+	Chr4:4243769-4243788	MsG0480018390.01.T01:intron	30.0%
	TTCAGAGACGAGATAATTTA+AGG	-	Chr4:4242829-4242848	None:intergenic	30.0%
	TTGAGAAGATGAAGATGATA+AGG	-	Chr4:4241071-4241090	None:intergenic	30.0%
!	AAGTGTAAAGAGAGAGTTTT+TGG	-	Chr4:4240990-4241009	None:intergenic	30.0%
!	ATAAGCAAGTTTTGCTCAAT+TGG	-	Chr4:4244906-4244925	None:intergenic	30.0%
!	CACTATGCAGATAATTGTTT+TGG	+	Chr4:4243321-4243340	MsG0480018390.01.T01:intron	30.0%
!	TAGACATCCTTTTGATCTTT+TGG	+	Chr4:4243399-4243418	MsG0480018390.01.T01:CDS	30.0%
!	TCTACCATCTTTTCAACTAT+AGG	-	Chr4:4242519-4242538	None:intergenic	30.0%
!	TCTCTCTAATGTTGTCATTT+CGG	-	Chr4:4242482-4242501	None:intergenic	30.0%
!	TTGAATCTGGTCTCAATTTT+AGG	-	Chr4:4244673-4244692	None:intergenic	30.0%
!!	ATAACATTTTGCAGTGTTGA+TGG	+	Chr4:4244326-4244345	MsG0480018390.01.T01:intron	30.0%
!!	CGCTTAATTTATTTTCGTGT+TGG	-	Chr4:4242404-4242423	None:intergenic	30.0%
!!!	AAAGAGAGAGTTTTTGGTTA+TGG	-	Chr4:4240984-4241003	None:intergenic	30.0%
!!!	CCATACTAGTCTTTTTCATA+TGG	+	Chr4:4242289-4242308	MsG0480018390.01.T01:intron	30.0%
	AAACTAGACTTAGGTGGTTT+AGG	+	Chr4:4242538-4242557	MsG0480018390.01.T01:intron	35.0%
	AACTTGTGGATTCTGTAGTT+AGG	+	Chr4:4242574-4242593	MsG0480018390.01.T01:intron	35.0%
	AAGAAAATCACGATAAGGGT+GGG	-	Chr4:4240896-4240915	None:intergenic	35.0%
	AAGAAGGAAACGAAGCAAAA+GGG	+	Chr4:4243068-4243087	MsG0480018390.01.T01:intron	35.0%
	AAGGTTAAAGTTAATGGTGG+GGG	-	Chr4:4241052-4241071	None:intergenic	35.0%
	ACAAAGATGGAAAACCGAAA+AGG	-	Chr4:4243619-4243638	None:intergenic	35.0%
	ACAACATGAATGTGATCACT+TGG	+	Chr4:4244454-4244473	MsG0480018390.01.T01:CDS	35.0%
	ACAACATTAGAGAGAGAGTT+GGG	+	Chr4:4242487-4242506	MsG0480018390.01.T01:intron	35.0%
	AGATGGTAGAAACTAGACTT+AGG	+	Chr4:4242529-4242548	MsG0480018390.01.T01:intron	35.0%
	AGCACCTATAGTTGAAAAGA+TGG	+	Chr4:4242512-4242531	MsG0480018390.01.T01:intron	35.0%
	AGTGTGGTAAGAAACAAAGA+TGG	-	Chr4:4243632-4243651	None:intergenic	35.0%
	ATAGACACTAGACATGATTC+TGG	+	Chr4:4241830-4241849	MsG0480018390.01.T01:intron	35.0%
	ATAGTTAGGCAAATCAAGTG+TGG	-	Chr4:4243648-4243667	None:intergenic	35.0%
	ATCATGTCTAGTGTCTATGT+CGG	-	Chr4:4241828-4241847	None:intergenic	35.0%
	ATCTCTAGATCCTTCTTGAT+AGG	-	Chr4:4242669-4242688	None:intergenic	35.0%
	ATTGAAGGAGCTAAGGTAAT+TGG	+	Chr4:4242995-4243014	MsG0480018390.01.T01:intron	35.0%
	ATTGACCATTTCACGACTAA+TGG	+	Chr4:4243892-4243911	MsG0480018390.01.T01:intron	35.0%
	CAAAATGAGGCAGATTTCAT+CGG	-	Chr4:4244724-4244743	None:intergenic	35.0%
	CAAACACCCTTCAAAAAACA+GGG	-	Chr4:4243578-4243597	None:intergenic	35.0%
	CATAAGAGAACCTATCAAGA+AGG	+	Chr4:4242656-4242675	MsG0480018390.01.T01:intron	35.0%
	CATATGTATGAGTGGTATGT+CGG	+	Chr4:4242048-4242067	MsG0480018390.01.T01:intron	35.0%
	CCAATCAAAATAACTGCTTC+TGG	+	Chr4:4244413-4244432	MsG0480018390.01.T01:CDS	35.0%
	CTATGGAAGCTTTACACTTA+CGG	+	Chr4:4240942-4240961	MsG0480018390.01.T01:CDS	35.0%
	CTTGCATTAAAGCTGAGAAA+TGG	-	Chr4:4244875-4244894	None:intergenic	35.0%
	GAAACGACTTATCATGGAAA+AGG	-	Chr4:4244778-4244797	None:intergenic	35.0%
	GAAATGGTCAATAGCCTATT+GGG	-	Chr4:4243884-4243903	None:intergenic	35.0%
	GATACATATAAAAGGCAAGC+TGG	-	Chr4:4242025-4242044	None:intergenic	35.0%
	GGATCTAGAGATTAATGAGT+TGG	+	Chr4:4242677-4242696	MsG0480018390.01.T01:intron	35.0%
	GTATCAGTCATATGTATGAG+TGG	+	Chr4:4242040-4242059	MsG0480018390.01.T01:intron	35.0%
	GTTGTACGGACATAGAATAT+TGG	+	Chr4:4242367-4242386	MsG0480018390.01.T01:intron	35.0%
	GTTGTCATGTGACTGAAAAT+GGG	+	Chr4:4241941-4241960	MsG0480018390.01.T01:intron	35.0%
	TAAGAAAATCACGATAAGGG+TGG	-	Chr4:4240897-4240916	None:intergenic	35.0%
	TAAGAAGGAAACGAAGCAAA+AGG	+	Chr4:4243067-4243086	MsG0480018390.01.T01:intron	35.0%
	TCAAAATAACTGCTTCTGGT+TGG	+	Chr4:4244417-4244436	MsG0480018390.01.T01:CDS	35.0%
	TCAAACACCCTTCAAAAAAC+AGG	-	Chr4:4243579-4243598	None:intergenic	35.0%
	TCAGATTGGAGTTTCTTCTA+GGG	+	Chr4:4241324-4241343	MsG0480018390.01.T01:CDS	35.0%
	TGAAATGGTCAATAGCCTAT+TGG	-	Chr4:4243885-4243904	None:intergenic	35.0%
	TGTTGTCATGTGACTGAAAA+TGG	+	Chr4:4241940-4241959	MsG0480018390.01.T01:intron	35.0%
	TTCTCAGACATTATCTCACT+AGG	-	Chr4:4241235-4241254	None:intergenic	35.0%
	TTTAGCCATTAGTCGTGAAA+TGG	-	Chr4:4243900-4243919	None:intergenic	35.0%
	TTTCAGAACCGTAGAAAACA+TGG	+	Chr4:4244514-4244533	MsG0480018390.01.T01:CDS	35.0%
	TTTCCATGATAAGTCGTTTC+AGG	+	Chr4:4244778-4244797	MsG0480018390.01.T01:three_prime_UTR	35.0%
!	AGCCGAAGGTAAAATTTTAC+CGG	+	Chr4:4242324-4242343	MsG0480018390.01.T01:intron	35.0%
!	ATCTAAGACATAGGCGAAAT+TGG	-	Chr4:4241627-4241646	None:intergenic	35.0%
!	ATTTTGTTAACGCTGAGAAG+TGG	+	Chr4:4243141-4243160	MsG0480018390.01.T01:intron	35.0%
!	GTCCGGTAAAATTTTACCTT+CGG	-	Chr4:4242329-4242348	None:intergenic	35.0%
!	TGGTTTTTGATGGAGCAATA+CGG	+	Chr4:4242709-4242728	MsG0480018390.01.T01:intron	35.0%
!	TTTTGTTAACGCTGAGAAGT+GGG	+	Chr4:4243142-4243161	MsG0480018390.01.T01:intron	35.0%
!!!	ACAAGGGCAGGTTTTTTTTT+TGG	+	Chr4:4241106-4241125	MsG0480018390.01.T01:CDS	35.0%
!!!	CCAGAAGCAGTTATTTTGAT+TGG	-	Chr4:4244416-4244435	None:intergenic	35.0%
!!!	GAGTTTTTGGTTATGGATAG+TGG	-	Chr4:4240977-4240996	None:intergenic	35.0%
!!!	GGTTCTCTTATGCTTTTTCT+AGG	-	Chr4:4242648-4242667	None:intergenic	35.0%
!!!	TGTTTTTTGAAGGGTGTTTG+AGG	+	Chr4:4243578-4243597	MsG0480018390.01.T01:CDS	35.0%
	AACCTGTAACTTCAACGTCA+AGG	-	Chr4:4244376-4244395	None:intergenic	40.0%
	AGAAGGAAACGAAGCAAAAG+GGG	+	Chr4:4243069-4243088	MsG0480018390.01.T01:intron	40.0%
	AGCCTCTTGCGTAAAAAACA+GGG	+	Chr4:4241980-4241999	MsG0480018390.01.T01:intron	40.0%
	AGTTAGGAGAGTAGATCAGA+TGG	+	Chr4:4242590-4242609	MsG0480018390.01.T01:intron	40.0%
	CAACATTAGAGAGAGAGTTG+GGG	+	Chr4:4242488-4242507	MsG0480018390.01.T01:intron	40.0%
	CATGAATGTGATCACTTGGA+TGG	+	Chr4:4244458-4244477	MsG0480018390.01.T01:CDS	40.0%
	CTAGAAGAAACTCCAATCTG+AGG	-	Chr4:4241325-4241344	None:intergenic	40.0%
	CTCAGATTGGAGTTTCTTCT+AGG	+	Chr4:4241323-4241342	MsG0480018390.01.T01:CDS	40.0%
	CTTGCGTAAAAAACAGGGTA+AGG	+	Chr4:4241985-4242004	MsG0480018390.01.T01:intron	40.0%
	GAAAAAGTGGGATACGATGT+TGG	-	Chr4:4243943-4243962	None:intergenic	40.0%
	GACAAACACGATGTTGTGTA+TGG	-	Chr4:4241796-4241815	None:intergenic	40.0%
	GACAACATTAGAGAGAGAGT+TGG	+	Chr4:4242486-4242505	MsG0480018390.01.T01:intron	40.0%
	GCATGTAGAGAGAAAACTTG+TGG	+	Chr4:4242560-4242579	MsG0480018390.01.T01:intron	40.0%
	GGGTTTACAGTGTTACAACT+TGG	+	Chr4:4241691-4241710	MsG0480018390.01.T01:intron	40.0%
	GTAAGACTAGCGATGTTGTA+CGG	+	Chr4:4242353-4242372	MsG0480018390.01.T01:intron	40.0%
	TAAGCGTAGCAGAGTTTAAG+AGG	+	Chr4:4242418-4242437	MsG0480018390.01.T01:intron	40.0%
	TCAGTGTTGTCAATCCTGTA+TGG	-	Chr4:4243845-4243864	None:intergenic	40.0%
	TGACGTTGAAGTTACAGGTT+TGG	+	Chr4:4244376-4244395	MsG0480018390.01.T01:CDS	40.0%
	TGGTAGAAACTAGACTTAGG+TGG	+	Chr4:4242532-4242551	MsG0480018390.01.T01:intron	40.0%
	TTAATGGTGCCCTAGATTGA+AGG	-	Chr4:4244290-4244309	None:intergenic	40.0%
	TTGCCTGAAACGACTTATCA+TGG	-	Chr4:4244784-4244803	None:intergenic	40.0%
	TTGCCTGATACTGTTAAAGC+TGG	+	Chr4:4241172-4241191	MsG0480018390.01.T01:CDS	40.0%
!	TCACCAGCTTTAACAGTATC+AGG	-	Chr4:4241178-4241197	None:intergenic	40.0%
!	TTGTTATTGTTCCGCCATAC+AGG	+	Chr4:4243828-4243847	MsG0480018390.01.T01:intron	40.0%
!!	GCTCATTGGTATTGACAAGT+GGG	-	Chr4:4241774-4241793	None:intergenic	40.0%
!!	TCGCTAGTCTTACAATTGTC+CGG	-	Chr4:4242346-4242365	None:intergenic	40.0%
!!	TCTACGGTTCTGAAAGTTCT+AGG	-	Chr4:4244509-4244528	None:intergenic	40.0%
!!	TGTTGATGGATTTAGAGCTG+TGG	+	Chr4:4244340-4244359	MsG0480018390.01.T01:CDS	40.0%
!!	TTCATTGGTTCTCTTGTTGC+AGG	+	Chr4:4243510-4243529	MsG0480018390.01.T01:intron	40.0%
!!!	AATGGTGGGGGTTTTGAAAA+TGG	-	Chr4:4241040-4241059	None:intergenic	40.0%
!!!	TACCCTGTTTTTTACGCAAG+AGG	-	Chr4:4241985-4242004	None:intergenic	40.0%
	AACCATATGAGGGGTAACCT+TGG	+	Chr4:4241902-4241921	MsG0480018390.01.T01:intron	45.0%
	AAGAGGTTGCGTTGAATGTG+TGG	+	Chr4:4242435-4242454	MsG0480018390.01.T01:intron	45.0%
	ACTCACTGATAGCTCTTGGT+TGG	+	Chr4:4244146-4244165	MsG0480018390.01.T01:intron	45.0%
	AGCTATGAGCACTTCCTTTG+GGG	-	Chr4:4243374-4243393	None:intergenic	45.0%
	AGGAGAGTAGATCAGATGGA+GGG	+	Chr4:4242594-4242613	MsG0480018390.01.T01:intron	45.0%
	CAACTTTATCAGTTGCGCCA+AGG	-	Chr4:4241922-4241941	None:intergenic	45.0%
	CACCTTGACGTTGAAGTTAC+AGG	+	Chr4:4244371-4244390	MsG0480018390.01.T01:CDS	45.0%
	CAGCCTCTTGCGTAAAAAAC+AGG	+	Chr4:4241979-4241998	MsG0480018390.01.T01:intron	45.0%
	CGATGTTGTGTATGGCTCAT+TGG	-	Chr4:4241788-4241807	None:intergenic	45.0%
	CGTGAGAAAAAACGTGTACG+CGG	+	Chr4:4244263-4244282	MsG0480018390.01.T01:intron	45.0%
	CTAGGATCAACTTCTTGAGC+AGG	-	Chr4:4241217-4241236	None:intergenic	45.0%
	CTCAACTCACTGATAGCTCT+TGG	+	Chr4:4244142-4244161	MsG0480018390.01.T01:intron	45.0%
	GAGCAGGTTCATGAAGAACA+GGG	-	Chr4:4241201-4241220	None:intergenic	45.0%
	GAGCTATGAGCACTTCCTTT+GGG	-	Chr4:4243375-4243394	None:intergenic	45.0%
	GAGGGGAGTTAAATCACTAG+AGG	+	Chr4:4242612-4242631	MsG0480018390.01.T01:intron	45.0%
	GCTACTATAAGAACAAGGGC+AGG	+	Chr4:4241094-4241113	MsG0480018390.01.T01:CDS	45.0%
	GTCAATAGCCTATTGGGAGT+CGG	-	Chr4:4243878-4243897	None:intergenic	45.0%
	GTGTTGTCAATCCTGTATGG+CGG	-	Chr4:4243842-4243861	None:intergenic	45.0%
	GTTACAGGTTTGGATCGCAA+TGG	+	Chr4:4244386-4244405	MsG0480018390.01.T01:CDS	45.0%
	TAGGAGAGTAGATCAGATGG+AGG	+	Chr4:4242593-4242612	MsG0480018390.01.T01:intron	45.0%
	TCAATAGCCTATTGGGAGTC+GGG	-	Chr4:4243877-4243896	None:intergenic	45.0%
	TCTGATAAGGCTGTCAACAC+AGG	+	Chr4:4244608-4244627	MsG0480018390.01.T01:three_prime_UTR	45.0%
	TGAGCAGGTTCATGAAGAAC+AGG	-	Chr4:4241202-4241221	None:intergenic	45.0%
	TGAGCTATGAGCACTTCCTT+TGG	-	Chr4:4243376-4243395	None:intergenic	45.0%
!	AAGCCTTATCCCATTGACTG+GGG	-	Chr4:4242758-4242777	None:intergenic	45.0%
!	AATAACTGCTTCTGGTTGGC+AGG	+	Chr4:4244421-4244440	MsG0480018390.01.T01:CDS	45.0%
!	AGGCAGGTCCATGTTTTCTA+CGG	-	Chr4:4244525-4244544	None:intergenic	45.0%
!	CAAGCCTTATCCCATTGACT+GGG	-	Chr4:4242759-4242778	None:intergenic	45.0%
!	CACGATAAGGGTGGGTTTAT+GGG	-	Chr4:4240888-4240907	None:intergenic	45.0%
!	CTGAAAATGGGTTCAAGTCC+TGG	+	Chr4:4241953-4241972	MsG0480018390.01.T01:intron	45.0%
!	TCACGATAAGGGTGGGTTTA+TGG	-	Chr4:4240889-4240908	None:intergenic	45.0%
!	TCCTTACAAAACCGGCTTTC+AGG	+	Chr4:4241447-4241466	MsG0480018390.01.T01:intron	45.0%
!	TGTGTTGACAGCCTTATCAG+AGG	-	Chr4:4244609-4244628	None:intergenic	45.0%
!!	ACCTGAAAGCCGGTTTTGTA+AGG	-	Chr4:4241451-4241470	None:intergenic	45.0%
!!	GGCTCATTGGTATTGACAAG+TGG	-	Chr4:4241775-4241794	None:intergenic	45.0%
!!	TGATGGATTTAGAGCTGTGG+TGG	+	Chr4:4244343-4244362	MsG0480018390.01.T01:CDS	45.0%
!!!	AGGACTGCCCTGTTTTTTGA+AGG	+	Chr4:4243568-4243587	MsG0480018390.01.T01:CDS	45.0%
!!!	GGACTGCCCTGTTTTTTGAA+GGG	+	Chr4:4243569-4243588	MsG0480018390.01.T01:CDS	45.0%
!!	AATAAAAAACAAAAAATAAA+GGG	-	Chr4:4241389-4241408	None:intergenic	5.0%
!!	TAATAAAAAACAAAAAATAA+AGG	-	Chr4:4241390-4241409	None:intergenic	5.0%
	AGGGTTATGAGGAAAGCTCC+TGG	+	Chr4:4241283-4241302	MsG0480018390.01.T01:CDS	50.0%
	ATGAGGAAAGCTCCTGGTGT+TGG	+	Chr4:4241289-4241308	MsG0480018390.01.T01:CDS	50.0%
	ATGTAGCCAACCCCAGTCAA+TGG	+	Chr4:4242745-4242764	MsG0480018390.01.T01:intron	50.0%
	CAACCCCAGTCAATGGGATA+AGG	+	Chr4:4242752-4242771	MsG0480018390.01.T01:intron	50.0%
	CAAGACTACAACTAGGCAGG+GGG	-	Chr4:4241733-4241752	None:intergenic	50.0%
	CATTGCTGCTGCCTCTGATA+AGG	+	Chr4:4244595-4244614	MsG0480018390.01.T01:three_prime_UTR	50.0%
	CCAGTCAATGGGATAAGGCT+TGG	+	Chr4:4242757-4242776	MsG0480018390.01.T01:intron	50.0%
	CCCAAAACATGCGTTACCGA+GGG	-	Chr4:4244574-4244593	None:intergenic	50.0%
	CGCAAGACTACAACTAGGCA+GGG	-	Chr4:4241735-4241754	None:intergenic	50.0%
	GCAAGACTACAACTAGGCAG+GGG	-	Chr4:4241734-4241753	None:intergenic	50.0%
	GCACTGCAGCTTCAGATTGA+AGG	-	Chr4:4242079-4242098	None:intergenic	50.0%
	GGAGAGTAGATCAGATGGAG+GGG	+	Chr4:4242595-4242614	MsG0480018390.01.T01:intron	50.0%
	GGTTTAGCTGCTCCTCAGAT+TGG	+	Chr4:4241310-4241329	MsG0480018390.01.T01:CDS	50.0%
	GTACGCGGTCCTTCAATCTA+GGG	+	Chr4:4244278-4244297	MsG0480018390.01.T01:intron	50.0%
	GTGGCAAGACTAGACGTGAT+AGG	+	Chr4:4242454-4242473	MsG0480018390.01.T01:intron	50.0%
	TCCCAAAACATGCGTTACCG+AGG	-	Chr4:4244575-4244594	None:intergenic	50.0%
	TGTACGCGGTCCTTCAATCT+AGG	+	Chr4:4244277-4244296	MsG0480018390.01.T01:intron	50.0%
	TGTAGCCAACCCCAGTCAAT+GGG	+	Chr4:4242746-4242765	MsG0480018390.01.T01:intron	50.0%
	TTGCTCGTACTCTTCAGCCT+GGG	-	Chr4:4243547-4243566	None:intergenic	50.0%
	TTTACCTCCCGACTCCCAAT+AGG	+	Chr4:4243867-4243886	MsG0480018390.01.T01:intron	50.0%
	TTTGCTCGTACTCTTCAGCC+TGG	-	Chr4:4243548-4243567	None:intergenic	50.0%
!	CCAAGCCTTATCCCATTGAC+TGG	-	Chr4:4242760-4242779	None:intergenic	50.0%
!	CCCTCGGTAACGCATGTTTT+GGG	+	Chr4:4244571-4244590	MsG0480018390.01.T01:exon	50.0%
!	CTTATCCCATTGACTGGGGT+TGG	-	Chr4:4242754-4242773	None:intergenic	50.0%
!	GGCTGAAGAGTACGAGCAAA+AGG	+	Chr4:4243548-4243567	MsG0480018390.01.T01:CDS	50.0%
!	TTACGCAAGAGGCTGTTTCC+AGG	-	Chr4:4241974-4241993	None:intergenic	50.0%
	AAGTGGGCCAAGACATCGAG+CGG	-	Chr4:4241758-4241777	None:intergenic	55.0%
	AGCGGCGCAAGACTACAACT+AGG	-	Chr4:4241740-4241759	None:intergenic	55.0%
	ATAGCCTATTGGGAGTCGGG+AGG	-	Chr4:4243874-4243893	None:intergenic	55.0%
	ATGGACCTGCCTCTTGCTCA+GGG	+	Chr4:4244533-4244552	MsG0480018390.01.T01:CDS	55.0%
	CGCCAAGGTTACCCCTCATA+TGG	-	Chr4:4241907-4241926	None:intergenic	55.0%
	CGTTACCGAGGGCCAAGTTT+CGG	-	Chr4:4244563-4244582	None:intergenic	55.0%
	GCGCAAGACTACAACTAGGC+AGG	-	Chr4:4241736-4241755	None:intergenic	55.0%
	GGAGCAGCTAAACCAACACC+AGG	-	Chr4:4241304-4241323	None:intergenic	55.0%
	GTTACCGAGGGCCAAGTTTC+GGG	-	Chr4:4244562-4244581	None:intergenic	55.0%
	TGCAGGTGATCGTGAATCCC+AGG	+	Chr4:4243527-4243546	MsG0480018390.01.T01:intron	55.0%
!	GCCCTCGGTAACGCATGTTT+TGG	+	Chr4:4244570-4244589	MsG0480018390.01.T01:exon	55.0%
!!	GGAAGTACTGCTCAAGCCGA+AGG	+	Chr4:4242310-4242329	MsG0480018390.01.T01:intron	55.0%
	CATGGACCTGCCTCTTGCTC+AGG	+	Chr4:4244532-4244551	MsG0480018390.01.T01:CDS	60.0%
	GATGCCCGAAACTTGGCCCT+CGG	+	Chr4:4244555-4244574	MsG0480018390.01.T01:CDS	60.0%
	GCTCAGGGATGCCCGAAACT+TGG	+	Chr4:4244548-4244567	MsG0480018390.01.T01:CDS	60.0%
	GTGGGGGCAAACCTGAAAGC+CGG	-	Chr4:4241461-4241480	None:intergenic	60.0%
	TCTTGCGCCGCTCGATGTCT+TGG	+	Chr4:4241748-4241767	MsG0480018390.01.T01:intron	60.0%
	TTCGGGCATCCCTGAGCAAG+AGG	-	Chr4:4244545-4244564	None:intergenic	60.0%
	GGCATCCCTGAGCAAGAGGC+AGG	-	Chr4:4244541-4244560	None:intergenic	65.0%
!	CTGCTTCTGGTTGGCAGGCC+CGG	+	Chr4:4244426-4244445	MsG0480018390.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	4240818	4244930	4240818	ID=MsG0480018390.01;Name=MsG0480018390.01
Chr4	mRNA	4240818	4244930	4240818	ID=MsG0480018390.01.T01;Parent=MsG0480018390.01;Name=MsG0480018390.01.T01;_AED=0.39;_eAED=0.39;_QI=117\|1\|1\|1\|0.75\|0.6\|5\|323\|269
Chr4	exon	4240818	4241345	4240818	ID=MsG0480018390.01.T01:exon:1553;Parent=MsG0480018390.01.T01
Chr4	exon	4243331	4243420	4243331	ID=MsG0480018390.01.T01:exon:1554;Parent=MsG0480018390.01.T01
Chr4	exon	4243532	4243599	4243532	ID=MsG0480018390.01.T01:exon:1555;Parent=MsG0480018390.01.T01
Chr4	exon	4244340	4244723	4244340	ID=MsG0480018390.01.T01:exon:1556;Parent=MsG0480018390.01.T01
Chr4	exon	4244751	4244930	4244751	ID=MsG0480018390.01.T01:exon:1557;Parent=MsG0480018390.01.T01
Chr4	five_prime_UTR	4240818	4240934	4240818	ID=MsG0480018390.01.T01:five_prime_utr;Parent=MsG0480018390.01.T01
Chr4	CDS	4240935	4241345	4240935	ID=MsG0480018390.01.T01:cds;Parent=MsG0480018390.01.T01
Chr4	CDS	4243331	4243420	4243331	ID=MsG0480018390.01.T01:cds;Parent=MsG0480018390.01.T01
Chr4	CDS	4243532	4243599	4243532	ID=MsG0480018390.01.T01:cds;Parent=MsG0480018390.01.T01
Chr4	CDS	4244340	4244580	4244340	ID=MsG0480018390.01.T01:cds;Parent=MsG0480018390.01.T01
Chr4	three_prime_UTR	4244581	4244723	4244581	ID=MsG0480018390.01.T01:three_prime_utr;Parent=MsG0480018390.01.T01
Chr4	three_prime_UTR	4244751	4244930	4244751	ID=MsG0480018390.01.T01:three_prime_utr;Parent=MsG0480018390.01.T01

Gene Sequence

>MsG0480018390.01.T01

ATGAAGGCTATGGAAGCTTTACACTTACGGTGTATACTTCCACTATCCATAACCAAAAACTCTCTCTTTACACTTCAAACAACAACCCCATTATCTCTATCACCATTTTCAAAACCCCCACCATTAACTTTAACCTTATCATCTTCATCTTCTCAAACTGCTACTATAAGAACAAGGGCAGGTTTTTTTTTTGGTCGTACAAAAGATGATGATAAGAAGAAGAAGAAGAAGATGAATTTGCCTGATACTGTTAAAGCTGGTGACCCTGTTCTTCATGAACCTGCTCAAGAAGTTGATCCTAGTGAGATAATGTCTGAGAAAGTGCAGAAAATTATTGATGATATGATTAGGGTTATGAGGAAAGCTCCTGGTGTTGGTTTAGCTGCTCCTCAGATTGGAGTTTCTTCTAGGATAATTGTTTTGGAAGATACCAAAGAATTTATTAGTTATGCCCCAAAGGAAGTGCTCATAGCTCAAGATAGACATCCTTTTGATCTTTTGGTGATCGTGAATCCCAGGCTGAAGAGTACGAGCAAAAGGACTGCCCTGTTTTTTGAAGGGTGTTTGAGTGTTGATGGATTTAGAGCTGTGGTGGAACGTCACCTTGACGTTGAAGTTACAGGTTTGGATCGCAATGGTGAACCAATCAAAATAACTGCTTCTGGTTGGCAGGCCCGGATTTTACAACATGAATGTGATCACTTGGATGGAACTCTATATGTTGATAAGATGGTACCTAGAACTTTCAGAACCGTAGAAAACATGGACCTGCCTCTTGCTCAGGGATGCCCGAAACTTGGCCCTCGGTAA

Protein sequence

>MsG0480018390.01.T01

MKAMEALHLRCILPLSITKNSLFTLQTTTPLSLSPFSKPPPLTLTLSSSSSQTATIRTRAGFFFGRTKDDDKKKKKKMNLPDTVKAGDPVLHEPAQEVDPSEIMSEKVQKIIDDMIRVMRKAPGVGLAAPQIGVSSRIIVLEDTKEFISYAPKEVLIAQDRHPFDLLVIVNPRLKSTSKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRNGEPIKITASGWQARILQHECDHLDGTLYVDKMVPRTFRTVENMDLPLAQGCPKLGPR*