AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041173.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041173.01.T01 MTR_7g105830 98.099 263 5 0 2 264 3 265 0.0 525
MsG0780041173.01.T01 MTR_1g105090 83.883 273 29 6 1 264 1 267 1.38e-153 429
MsG0780041173.01.T01 MTR_4g094720 31.111 180 114 3 73 247 6 180 8.79e-23 93.6
MsG0780041173.01.T01 MTR_4g124790 30.994 171 102 5 59 228 66 221 5.46e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041173.01.T01 AT5G06290 90.741 216 18 2 50 264 59 273 5.34e-144 405
MsG0780041173.01.T01 AT3G11630 91.667 204 16 1 62 264 63 266 5.99e-140 394
MsG0780041173.01.T01 AT5G06290 87.845 181 20 2 50 229 59 238 2.55e-113 326
MsG0780041173.01.T01 AT1G48130 30.114 176 118 2 73 247 6 177 5.13e-23 94.0
MsG0780041173.01.T01 AT3G26060 34.194 155 90 4 74 227 10 153 1.16e-16 75.5
MsG0780041173.01.T01 AT3G26060 33.758 157 88 5 74 227 72 215 2.94e-16 75.9
MsG0780041173.01.T01 AT3G26060 33.758 157 88 5 74 227 73 216 3.24e-16 75.9

Find 105 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGGTGTACACCTTGATTT+TGG 0.190910 7:+87581947 MsG0780041173.01.T01:three_prime_UTR
TTGCGCATCATAACTTAAAA+TGG 0.199343 7:-87581904 None:intergenic
GGGAGGGAAGTGCGTAGTTT+AGG 0.215883 7:-87577532 None:intergenic
AATAATACTTTCATTTATAA+TGG 0.234593 7:+87582032 MsG0780041173.01.T01:three_prime_UTR
GTTAAACTATCTGAATATAT+TGG 0.248804 7:+87578973 MsG0780041173.01.T01:CDS
TTGGGAGAGAAGAGGATGTT+AGG 0.252613 7:-87577451 None:intergenic
GGGAGAGAATTGGAGGAATT+GGG 0.258409 7:-87577511 None:intergenic
ATACTTTATCTCTCTATCTT+TGG 0.267768 7:+87577348 MsG0780041173.01.T01:five_prime_UTR
AGTACTCTTTGCTAAGTTTA+GGG 0.275142 7:-87581781 None:intergenic
AAGTACTCTTTGCTAAGTTT+AGG 0.277836 7:-87581782 None:intergenic
ATGTGGTGGAGAAGATAATT+TGG 0.278915 7:-87577470 None:intergenic
AGGGAGAGAATTGGAGGAAT+TGG 0.282783 7:-87577512 None:intergenic
GGAACTTAATACAGAGATAT+TGG 0.285595 7:+87579173 MsG0780041173.01.T01:CDS
GGAGGGAAGTGCGTAGTTTA+GGG 0.295279 7:-87577531 None:intergenic
GTATCGATTGGGGATGTAAA+AGG 0.296126 7:+87581859 MsG0780041173.01.T01:three_prime_UTR
AAGTTTAGGGTCTGGTTTCA+TGG 0.308012 7:-87581768 None:intergenic
CCCGATGAAGTTTGCCCTGC+TGG 0.308593 7:+87581725 MsG0780041173.01.T01:CDS
TGGGAGAGAAGAGGATGTTA+GGG 0.369953 7:-87577450 None:intergenic
TGCCCTGCTGGGTGGAAGCC+TGG 0.371090 7:+87581737 MsG0780041173.01.T01:CDS
TGTGGTGGAGAAGATAATTT+GGG 0.380711 7:-87577469 None:intergenic
AAATCCATATCAAAATCTTA+TGG 0.385045 7:+87581142 MsG0780041173.01.T01:CDS
TTCACATTTGTTTGCCCCAC+AGG 0.386111 7:+87579033 MsG0780041173.01.T01:CDS
TTAAACTATCTGAATATATT+GGG 0.386115 7:+87578974 MsG0780041173.01.T01:CDS
CCAGCAGGGCAAACTTCATC+GGG 0.387505 7:-87581725 None:intergenic
ACAGCCTCAGCTTCAAAATC+TGG 0.388070 7:-87578854 None:intergenic
TGTAGTTCTCGCACCTTGCA+TGG 0.388525 7:+87581053 MsG0780041173.01.T01:intron
GTGTCAAAATTTACCTGATC+AGG 0.391100 7:-87581175 None:intergenic
TGGTGTTCTCATTCCTGATC+AGG 0.396767 7:+87581162 MsG0780041173.01.T01:CDS
ACCATCAACAACCTCGGAAT+TGG 0.399693 7:+87581500 MsG0780041173.01.T01:CDS
GCGTAGTTTAGGGAGAGAAT+TGG 0.401138 7:-87577521 None:intergenic
ACAGATAAGAACAGAAGAAA+TGG 0.403614 7:-87581991 None:intergenic
AGAAGCAGATGGAGCTGAGC+AGG 0.404326 7:-87577413 None:intergenic
AGGAGCGGTTGAGGGAAAGA+GGG 0.413713 7:-87577552 None:intergenic
GGTTTCATGGACTTCTCACC+AGG 0.417997 7:-87581755 None:intergenic
TCACCAGGCTTCCACCCAGC+AGG 0.418832 7:-87581740 None:intergenic
GAGAAGAAGAGGAGCGGTTG+AGG 0.419127 7:-87577561 None:intergenic
GAGGAGCGGTTGAGGGAAAG+AGG 0.420689 7:-87577553 None:intergenic
TCTTTGCTAAGTTTAGGGTC+TGG 0.422181 7:-87581776 None:intergenic
ACTGCTCATCTGTATCGATT+GGG 0.429908 7:+87581848 MsG0780041173.01.T01:three_prime_UTR
ACCAATTCCGAGGTTGTTGA+TGG 0.432822 7:-87581501 None:intergenic
GACAGAAAGTCCGGTGGTCT+CGG 0.433149 7:+87581085 MsG0780041173.01.T01:CDS
AACTGCTCATCTGTATCGAT+TGG 0.445433 7:+87581847 MsG0780041173.01.T01:three_prime_UTR
GAACTTAATACAGAGATATT+GGG 0.451651 7:+87579174 MsG0780041173.01.T01:CDS
GGCGCAGCGTTCCCAACTAA+TGG 0.459593 7:-87578833 None:intergenic
AAGAGCGAACTACCATTAGT+TGG 0.460962 7:+87578821 MsG0780041173.01.T01:intron
TTTGGCTTCTTCTACCTCAC+AGG 0.463915 7:+87577366 MsG0780041173.01.T01:five_prime_UTR
CCCAGCAGGGCAAACTTCAT+CGG 0.471666 7:-87581726 None:intergenic
AGCGGTTGAGGGAAAGAGGG+AGG 0.482247 7:-87577549 None:intergenic
GGAGAGAATTGGAGGAATTG+GGG 0.485152 7:-87577510 None:intergenic
TGACCGCCATGCAGAATTTG+CGG 0.486264 7:+87579152 MsG0780041173.01.T01:CDS
GTGTTGTTATTAAAGCATAT+CGG 0.494699 7:+87581929 MsG0780041173.01.T01:three_prime_UTR
TGTTCATTATTGACAAGGAA+GGG 0.497591 7:+87581462 MsG0780041173.01.T01:CDS
ATGCTTCACCTCCACCCATT+CGG 0.503763 7:-87577274 None:intergenic
TTCTGTGATTTAAGTAAGCA+AGG 0.504638 7:+87582073 MsG0780041173.01.T01:three_prime_UTR
GCGGTTGAGGGAAAGAGGGA+GGG 0.507328 7:-87577548 None:intergenic
GAAACTGCGGCGAGAAGAAG+AGG 0.508647 7:-87577572 None:intergenic
CTTACTTAAATCACAGAACA+AGG 0.511073 7:-87582068 None:intergenic
AGAAGAAGAGGAGCGGTTGA+GGG 0.511653 7:-87577560 None:intergenic
GTAGTTCTCGCACCTTGCAT+GGG 0.512924 7:+87581054 MsG0780041173.01.T01:intron
CATAATTCACTCCAAAATCA+AGG 0.515253 7:-87581958 None:intergenic
AAACAAATGTGAAGTCCAAT+GGG 0.523515 7:-87579023 None:intergenic
TAGTTTAGGGAGAGAATTGG+AGG 0.527220 7:-87577518 None:intergenic
TTGTTCATTATTGACAAGGA+AGG 0.531673 7:+87581461 MsG0780041173.01.T01:CDS
AAGATAATTTGGGAGAGAAG+AGG 0.533309 7:-87577459 None:intergenic
AGAGCGAACTACCATTAGTT+GGG 0.537134 7:+87578822 MsG0780041173.01.T01:intron
CAAACAAATGTGAAGTCCAA+TGG 0.543653 7:-87579024 None:intergenic
GAGAGAGAAGAAAGATGTGG+TGG 0.544776 7:-87577484 None:intergenic
CCGATGAAGTTTGCCCTGCT+GGG 0.550218 7:+87581726 MsG0780041173.01.T01:CDS
GCAGGCCTTGCAATACGTGC+AGG 0.551362 7:+87581697 MsG0780041173.01.T01:intron
AGAATTGGAGGAATTGGGGA+TGG 0.555868 7:-87577506 None:intergenic
GTTCTCCTGCACGTATTGCA+AGG 0.557103 7:-87581702 None:intergenic
GTTCATTATTGACAAGGAAG+GGG 0.557158 7:+87581463 MsG0780041173.01.T01:CDS
AGGTGGGGTTGGAGCCTCTG+AGG 0.558608 7:+87577319 MsG0780041173.01.T01:five_prime_UTR
TGAGACAAAGAGAACACTCC+AGG 0.563249 7:+87581535 MsG0780041173.01.T01:CDS
GTTCAAACAGACAGAAAGTC+CGG 0.564704 7:+87581076 MsG0780041173.01.T01:CDS
GGTTGTTGATGGTAGAATGT+TGG 0.565020 7:-87581490 None:intergenic
TGAAATAGTGTCCGAATGGG+TGG 0.576276 7:+87577263 MsG0780041173.01.T01:five_prime_UTR
CACCAGGCTTCCACCCAGCA+GGG 0.584088 7:-87581739 None:intergenic
GAAGATAAGAGAGAAGCAGA+TGG 0.588346 7:-87577424 None:intergenic
TGTCTGTTTGAACCCATGCA+AGG 0.591033 7:-87581066 None:intergenic
CTGCTCATCTGTATCGATTG+GGG 0.599468 7:+87581849 MsG0780041173.01.T01:three_prime_UTR
ATTTAGGGGATAGCATTGAG+AGG 0.608578 7:+87581437 MsG0780041173.01.T01:intron
GTTCAAGTCACCGAGACCAC+CGG 0.609395 7:-87581095 None:intergenic
TCATCACACTCACTCAAACA+TGG 0.612785 7:+87577390 MsG0780041173.01.T01:exon
AACTTGAAATAGTGTCCGAA+TGG 0.617017 7:+87577259 MsG0780041173.01.T01:five_prime_UTR
GAATGGGTGGAGGTGAAGCA+TGG 0.617621 7:+87577276 MsG0780041173.01.T01:five_prime_UTR
ACTTGAAATAGTGTCCGAAT+GGG 0.618416 7:+87577260 MsG0780041173.01.T01:five_prime_UTR
CAACACTTCTACCAATTCCG+AGG 0.625459 7:-87581511 None:intergenic
TAAGTTCCGCAAATTCTGCA+TGG 0.626665 7:-87579158 None:intergenic
AGGATTGTTCATTATTGACA+AGG 0.639152 7:+87581457 MsG0780041173.01.T01:CDS
ATGGAGAGAGAAGAAAGATG+TGG 0.640784 7:-87577487 None:intergenic
CATTCTACCATCAACAACCT+CGG 0.642105 7:+87581494 MsG0780041173.01.T01:CDS
GGGTGTTTCAGTTGACAGTG+TGG 0.646005 7:+87579194 MsG0780041173.01.T01:CDS
TTGGTGACATCAGATACTAA+AGG 0.646692 7:-87581121 None:intergenic
AATAGTGTCCGAATGGGTGG+AGG 0.656627 7:+87577266 MsG0780041173.01.T01:five_prime_UTR
ATGAAGTTTGCCCTGCTGGG+TGG 0.658136 7:+87581729 MsG0780041173.01.T01:CDS
TTACTTAAATCACAGAACAA+GGG 0.660306 7:-87582067 None:intergenic
TAAAGTATATTATACCTCAG+AGG 0.685656 7:-87577333 None:intergenic
TGCGGCGAGAAGAAGAGGAG+CGG 0.686466 7:-87577567 None:intergenic
AAGCTTTAACGACGAAACTG+CGG 0.686884 7:-87577585 None:intergenic
GTTCCGCAAATTCTGCATGG+CGG 0.722852 7:-87579155 None:intergenic
GTGAGTGTGATGAGCCTGTG+AGG 0.729084 7:-87577380 None:intergenic
AAAGGGTCGACCAACCTGTG+GGG 0.742883 7:-87579047 None:intergenic
CAAACAGACAGAAAGTCCGG+TGG 0.767889 7:+87581079 MsG0780041173.01.T01:CDS
CAGCAGGGCAAACTTCATCG+GGG 0.776185 7:-87581724 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATACTTTCATTTATAA+TGG + Chr7:87582032-87582051 MsG0780041173.01.T01:three_prime_UTR 10.0%
!! TAAAGAAAATGTAAATAAAA+GGG - Chr7:87579683-87579702 None:intergenic 10.0%
!! TATATATATATATATGAGTT+AGG - Chr7:87580653-87580672 None:intergenic 10.0%
!!! TTTAATTTCAATATATTATC+TGG + Chr7:87581256-87581275 MsG0780041173.01.T01:intron 10.0%
!!! TTTTTTATATATACTAATCT+AGG + Chr7:87579575-87579594 MsG0780041173.01.T01:intron 10.0%
!! AATATGTATTATTATTGACA+TGG + Chr7:87580207-87580226 MsG0780041173.01.T01:intron 15.0%
!! AGGACTAATTATTAAAATTA+AGG - Chr7:87579230-87579249 None:intergenic 15.0%
!! ATATGTATTATTATTGACAT+GGG + Chr7:87580208-87580227 MsG0780041173.01.T01:intron 15.0%
!! ATCAATAAATTATAAATGTC+TGG - Chr7:87579285-87579304 None:intergenic 15.0%
!! ATTTATTCATTTCATTGTTA+AGG - Chr7:87580552-87580571 None:intergenic 15.0%
!! CTAAAGAAAATGTAAATAAA+AGG - Chr7:87579684-87579703 None:intergenic 15.0%
!! TAAATCTAATTAAGAAACAT+GGG + Chr7:87580260-87580279 MsG0780041173.01.T01:intron 15.0%
!! TCAATAAATTATAAATGTCT+GGG - Chr7:87579284-87579303 None:intergenic 15.0%
!! TGAGTTTATAAAATTACTTT+CGG + Chr7:87577728-87577747 MsG0780041173.01.T01:intron 15.0%
!! TTAAACTATCTGAATATATT+GGG + Chr7:87578974-87578993 MsG0780041173.01.T01:CDS 15.0%
!! TTAAATCTAATTAAGAAACA+TGG + Chr7:87580259-87580278 MsG0780041173.01.T01:intron 15.0%
!! TTGAATAATTAAAAACAAGA+TGG + Chr7:87578601-87578620 MsG0780041173.01.T01:intron 15.0%
!!! ACTTTTTATAATGTAGTATA+AGG + Chr7:87577879-87577898 MsG0780041173.01.T01:intron 15.0%
!!! CTTTTTATAATGTAGTATAA+GGG + Chr7:87577880-87577899 MsG0780041173.01.T01:intron 15.0%
!!! TTATTTATAAATTAGTTTGC+TGG - Chr7:87579777-87579796 None:intergenic 15.0%
!!! TTTTTCAATTAAGAATACAT+GGG - Chr7:87578083-87578102 None:intergenic 15.0%
!!! TTTTTTATTCCACTTTTTTT+CGG + Chr7:87581383-87581402 MsG0780041173.01.T01:intron 15.0%
!!! TTTTTTCAATTAAGAATACA+TGG - Chr7:87578084-87578103 None:intergenic 15.0%
!! AAATCCATATCAAAATCTTA+TGG + Chr7:87581142-87581161 MsG0780041173.01.T01:CDS 20.0%
!! AAGTTTCATTAAAATGAGTT+TGG + Chr7:87577773-87577792 MsG0780041173.01.T01:intron 20.0%
!! ACACCATTAGATTAATTAAA+TGG - Chr7:87579934-87579953 None:intergenic 20.0%
!! AGTATATATAAAAAACGTGA+AGG - Chr7:87579570-87579589 None:intergenic 20.0%
!! ATATAAGAGTTAACAATAGA+AGG - Chr7:87579250-87579269 None:intergenic 20.0%
!! ATATTTATAAGCTAGTACAA+CGG + Chr7:87578143-87578162 MsG0780041173.01.T01:intron 20.0%
!! ATCAAATATTGAATTGATTG+TGG - Chr7:87580173-87580192 None:intergenic 20.0%
!! ATTAAGATCAAAACAAAGAA+TGG + Chr7:87580579-87580598 MsG0780041173.01.T01:intron 20.0%
!! ATTTATTGATATGACATTGT+TGG + Chr7:87579295-87579314 MsG0780041173.01.T01:intron 20.0%
!! CAATAAATTATAAATGTCTG+GGG - Chr7:87579283-87579302 None:intergenic 20.0%
!! CATCCATTTAATTAATCTAA+TGG + Chr7:87579928-87579947 MsG0780041173.01.T01:intron 20.0%
!! CATTAGATTAATTAAATGGA+TGG - Chr7:87579930-87579949 None:intergenic 20.0%
!! GTATATATAAAAAACGTGAA+GGG - Chr7:87579569-87579588 None:intergenic 20.0%
!! GTTAAACTATCTGAATATAT+TGG + Chr7:87578973-87578992 MsG0780041173.01.T01:CDS 20.0%
!! TAAGCTATAAGCTAAAAAAT+TGG - Chr7:87577920-87577939 None:intergenic 20.0%
!! TACAACTATAGTTTACTAAA+GGG - Chr7:87579067-87579086 None:intergenic 20.0%
!!! ATAAGATTTTGATATGGATT+TGG - Chr7:87581143-87581162 None:intergenic 20.0%
!!! ATTCTTTGTTTTGATCTTAA+TGG - Chr7:87580580-87580599 None:intergenic 20.0%
!!! ATTTTAATTGAATCGAATAG+TGG - Chr7:87580237-87580256 None:intergenic 20.0%
!!! ATTTTGACTTTCCATTATTT+AGG - Chr7:87580819-87580838 None:intergenic 20.0%
!!! CTATCTTTTACAAATTCAAT+CGG + Chr7:87578174-87578193 MsG0780041173.01.T01:intron 20.0%
!!! TAACATCCATCTTATTTTTT+AGG + Chr7:87577299-87577318 MsG0780041173.01.T01:five_prime_UTR 20.0%
!!! TATTATCTGGAATGAAATAT+AGG + Chr7:87581269-87581288 MsG0780041173.01.T01:intron 20.0%
!!! TTTTTTTTGCTATGATCAAT+TGG + Chr7:87580432-87580451 MsG0780041173.01.T01:intron 20.0%
! AAAAAACAGATGACTAAATG+TGG - Chr7:87581603-87581622 None:intergenic 25.0%
! AAAATATGTAAGACAGTAAG+TGG - Chr7:87579451-87579470 None:intergenic 25.0%
! AACTATTCTATTCTTCCATA+CGG - Chr7:87580782-87580801 None:intergenic 25.0%
! AAGTAGAATTGAGTAATTCA+TGG - Chr7:87580076-87580095 None:intergenic 25.0%
! AAGTTACAACAGTCAATAAT+TGG - Chr7:87578714-87578733 None:intergenic 25.0%
! ATACTTTATCTCTCTATCTT+TGG + Chr7:87577348-87577367 MsG0780041173.01.T01:five_prime_UTR 25.0%
! ATGGAAGAATAGAATAGTTT+GGG + Chr7:87580783-87580802 MsG0780041173.01.T01:intron 25.0%
! ATTCATTTCATTGTTAAGGT+GGG - Chr7:87580548-87580567 None:intergenic 25.0%
! CTACAACTATAGTTTACTAA+AGG - Chr7:87579068-87579087 None:intergenic 25.0%
! GAACTTAATACAGAGATATT+GGG + Chr7:87579174-87579193 MsG0780041173.01.T01:CDS 25.0%
! GTAGAACATAGAAAGATAAA+AGG - Chr7:87581637-87581656 None:intergenic 25.0%
! TAAAGTATATTATACCTCAG+AGG - Chr7:87577336-87577355 None:intergenic 25.0%
! TATGGAAGAATAGAATAGTT+TGG + Chr7:87580782-87580801 MsG0780041173.01.T01:intron 25.0%
! TATTCATTTCATTGTTAAGG+TGG - Chr7:87580549-87580568 None:intergenic 25.0%
! TTACTTAAATCACAGAACAA+GGG - Chr7:87582070-87582089 None:intergenic 25.0%
!! GTGTTGTTATTAAAGCATAT+CGG + Chr7:87581929-87581948 MsG0780041173.01.T01:three_prime_UTR 25.0%
!! TGATACCATCTTAGAATTTT+AGG + Chr7:87578402-87578421 MsG0780041173.01.T01:intron 25.0%
!!! AACACCATAAGATTTTGATA+TGG - Chr7:87581149-87581168 None:intergenic 25.0%
!!! AGAAAATTTTGGGGATAATT+AGG - Chr7:87580024-87580043 None:intergenic 25.0%
!!! ATAAAGAGTGTTCAAAGATT+TGG + Chr7:87579424-87579443 MsG0780041173.01.T01:intron 25.0%
!!! ATCCATCTTATTTTTTAGGT+GGG + Chr7:87577303-87577322 MsG0780041173.01.T01:five_prime_UTR 25.0%
!!! GTTTTAAACTCAGTTTGTAT+AGG + Chr7:87579722-87579741 MsG0780041173.01.T01:intron 25.0%
!!! TGAACACTCTTTATTTTCTT+CGG - Chr7:87579418-87579437 None:intergenic 25.0%
AAACAAATGTGAAGTCCAAT+GGG - Chr7:87579026-87579045 None:intergenic 30.0%
AAATAGAGGCTAAGATGTAT+AGG + Chr7:87578289-87578308 MsG0780041173.01.T01:intron 30.0%
AACAAAGAATGGTTAGGATT+TGG + Chr7:87580590-87580609 MsG0780041173.01.T01:intron 30.0%
AAGATATAAGGTCTGAACAT+GGG - Chr7:87578489-87578508 None:intergenic 30.0%
AAGTACTCTTTGCTAAGTTT+AGG - Chr7:87581785-87581804 None:intergenic 30.0%
AAGTCTATCCAAAGATTCAT+TGG - Chr7:87578382-87578401 None:intergenic 30.0%
AATAGAGGCTAAGATGTATA+GGG + Chr7:87578290-87578309 MsG0780041173.01.T01:intron 30.0%
AATCATGAACTATACATGTG+CGG - Chr7:87579474-87579493 None:intergenic 30.0%
ACAGATAAGAACAGAAGAAA+TGG - Chr7:87581994-87582013 None:intergenic 30.0%
AGAAGAATCTGAATTGTTGT+TGG - Chr7:87580127-87580146 None:intergenic 30.0%
AGGATTGTTCATTATTGACA+AGG + Chr7:87581457-87581476 MsG0780041173.01.T01:CDS 30.0%
AGGGTGAACAAGAAAATATT+TGG - Chr7:87579094-87579113 None:intergenic 30.0%
AGTACTCTTTGCTAAGTTTA+GGG - Chr7:87581784-87581803 None:intergenic 30.0%
AGTCTATCCAAAGATTCATT+GGG - Chr7:87578381-87578400 None:intergenic 30.0%
ATGAGATTGGGATCAAATTA+AGG + Chr7:87580287-87580306 MsG0780041173.01.T01:intron 30.0%
CAAATGTTTCGATGATTTAG+GGG + Chr7:87581423-87581442 MsG0780041173.01.T01:intron 30.0%
CACATGTATAGTTCATGATT+AGG + Chr7:87579474-87579493 MsG0780041173.01.T01:intron 30.0%
CATAATTCACTCCAAAATCA+AGG - Chr7:87581961-87581980 None:intergenic 30.0%
CCAAACACTACAAATTCAAT+CGG + Chr7:87578209-87578228 MsG0780041173.01.T01:intron 30.0%
CTAAGATGTATAGGGTAAAA+TGG + Chr7:87578298-87578317 MsG0780041173.01.T01:intron 30.0%
CTTACTTAAATCACAGAACA+AGG - Chr7:87582071-87582090 None:intergenic 30.0%
GATCAAAACAAAGAATGGTT+AGG + Chr7:87580584-87580603 MsG0780041173.01.T01:intron 30.0%
GCAAATGTTTCGATGATTTA+GGG + Chr7:87581422-87581441 MsG0780041173.01.T01:intron 30.0%
GCAGAGGAAAATTAAAACTA+AGG - Chr7:87580747-87580766 None:intergenic 30.0%
GCATCTATCAATTGATAAAC+TGG - Chr7:87577689-87577708 None:intergenic 30.0%
GGAACTTAATACAGAGATAT+TGG + Chr7:87579173-87579192 MsG0780041173.01.T01:CDS 30.0%
TAGACGAGAAACAAATGTTA+GGG - Chr7:87579113-87579132 None:intergenic 30.0%
TATACATCTTAGCCTCTATT+TGG - Chr7:87578290-87578309 None:intergenic 30.0%
TATTAGAGACATTGCTTTCA+TGG + Chr7:87578333-87578352 MsG0780041173.01.T01:intron 30.0%
TCAATTGGTATTTGATTGTG+TGG + Chr7:87580447-87580466 MsG0780041173.01.T01:intron 30.0%
TGAAATATAGGATGCTTTCA+AGG + Chr7:87581281-87581300 MsG0780041173.01.T01:intron 30.0%
TGACTTTCCATTATTTAGGA+AGG - Chr7:87580815-87580834 None:intergenic 30.0%
TGCAAATGTTTCGATGATTT+AGG + Chr7:87581421-87581440 MsG0780041173.01.T01:intron 30.0%
TGGAAAGTCAAAATATCAGT+TGG + Chr7:87580825-87580844 MsG0780041173.01.T01:intron 30.0%
TGGAAGAATAGAATAGTTTG+GGG + Chr7:87580784-87580803 MsG0780041173.01.T01:intron 30.0%
TGTTCATTATTGACAAGGAA+GGG + Chr7:87581462-87581481 MsG0780041173.01.T01:CDS 30.0%
TTAAATGGATGGATCAGATT+TGG - Chr7:87579919-87579938 None:intergenic 30.0%
TTAAGGAATTGGATTTGAGT+AGG + Chr7:87580304-87580323 MsG0780041173.01.T01:intron 30.0%
TTCATTTCATTGTTAAGGTG+GGG - Chr7:87580547-87580566 None:intergenic 30.0%
TTCTGTGATTTAAGTAAGCA+AGG + Chr7:87582073-87582092 MsG0780041173.01.T01:three_prime_UTR 30.0%
TTGCGCATCATAACTTAAAA+TGG - Chr7:87581907-87581926 None:intergenic 30.0%
TTGGGATCAAATTAAGGAAT+TGG + Chr7:87580293-87580312 MsG0780041173.01.T01:intron 30.0%
TTGTTCATTATTGACAAGGA+AGG + Chr7:87581461-87581480 MsG0780041173.01.T01:CDS 30.0%
! AACTAAAGCAATGTCTTTTC+AGG + Chr7:87578951-87578970 MsG0780041173.01.T01:intron 30.0%
! AATTTTCTACACCATCTCTT+TGG + Chr7:87580036-87580055 MsG0780041173.01.T01:intron 30.0%
! AGAGATGGTGTAGAAAATTT+TGG - Chr7:87580035-87580054 None:intergenic 30.0%
! AGATGGTGTAGAAAATTTTG+GGG - Chr7:87580033-87580052 None:intergenic 30.0%
! GAGATGGTGTAGAAAATTTT+GGG - Chr7:87580034-87580053 None:intergenic 30.0%
! TCTTTTTATGTCCAATCCAA+AGG + Chr7:87580982-87581001 MsG0780041173.01.T01:intron 30.0%
! TTTTGATCAGGAGTTTATCA+AGG + Chr7:87578877-87578896 MsG0780041173.01.T01:CDS 30.0%
!! AAATTTTGGGGATAATTAGG+CGG - Chr7:87580021-87580040 None:intergenic 30.0%
!! ACCATCTTAGAATTTTAGGT+TGG + Chr7:87578406-87578425 MsG0780041173.01.T01:intron 30.0%
!! TGAGCTTATGTGTTTTGTTA+TGG + Chr7:87577637-87577656 MsG0780041173.01.T01:intron 30.0%
!!! CATCCATCTTATTTTTTAGG+TGG + Chr7:87577302-87577321 MsG0780041173.01.T01:five_prime_UTR 30.0%
!!! CCATCTTAGAATTTTAGGTT+GGG + Chr7:87578407-87578426 MsG0780041173.01.T01:intron 30.0%
!!! TCCATCTTATTTTTTAGGTG+GGG + Chr7:87577304-87577323 MsG0780041173.01.T01:five_prime_UTR 30.0%
!!! TTTTAATTTTCCTCTGCAAC+CGG + Chr7:87580750-87580769 MsG0780041173.01.T01:intron 30.0%
AACACATAAGCTCAACAAAG+AGG - Chr7:87577631-87577650 None:intergenic 35.0%
AACTTGAAATAGTGTCCGAA+TGG + Chr7:87577259-87577278 MsG0780041173.01.T01:five_prime_UTR 35.0%
AAGATAATTTGGGAGAGAAG+AGG - Chr7:87577462-87577481 None:intergenic 35.0%
AATTAGGCGGAGATTAAACA+AGG - Chr7:87580008-87580027 None:intergenic 35.0%
ACACATAAGCTCAACAAAGA+GGG - Chr7:87577630-87577649 None:intergenic 35.0%
ACCCCACCTAAAAAATAAGA+TGG - Chr7:87577308-87577327 None:intergenic 35.0%
ACTTGAAATAGTGTCCGAAT+GGG + Chr7:87577260-87577279 MsG0780041173.01.T01:five_prime_UTR 35.0%
AGAAAGCGATTGTTACCAAA+CGG - Chr7:87577974-87577993 None:intergenic 35.0%
AGTTCATGATTAGGAGTTCT+AGG + Chr7:87579483-87579502 MsG0780041173.01.T01:intron 35.0%
ATCAAGAAGAAGCAGACTTT+AGG - Chr7:87581012-87581031 None:intergenic 35.0%
ATGTAGTATAAGGGTCTATC+TGG + Chr7:87577889-87577908 MsG0780041173.01.T01:intron 35.0%
ATTAAAACTAAGGAGTCCAG+TGG - Chr7:87580737-87580756 None:intergenic 35.0%
ATTGAGTAATTCATGGACGT+TGG - Chr7:87580069-87580088 None:intergenic 35.0%
CAAACAAATGTGAAGTCCAA+TGG - Chr7:87579027-87579046 None:intergenic 35.0%
CAAGAAAGACGATGAAACTA+TGG + Chr7:87580327-87580346 MsG0780041173.01.T01:intron 35.0%
CAATTCAGATTCTTCTTCAC+TGG + Chr7:87580131-87580150 MsG0780041173.01.T01:intron 35.0%
CACCTCACATTAGCAATTTA+GGG - Chr7:87579966-87579985 None:intergenic 35.0%
CCGATTGAATTTGTAGTGTT+TGG - Chr7:87578212-87578231 None:intergenic 35.0%
GAAGATATAAGGTCTGAACA+TGG - Chr7:87578490-87578509 None:intergenic 35.0%
GAATTAACTTCGTGTATCCA+TGG + Chr7:87580101-87580120 MsG0780041173.01.T01:intron 35.0%
GCAAGCTACATATAATTACC+TGG - Chr7:87581556-87581575 None:intergenic 35.0%
GGAAGTTCCTTCCTAAATAA+TGG + Chr7:87580805-87580824 MsG0780041173.01.T01:intron 35.0%
GTAGACGAGAAACAAATGTT+AGG - Chr7:87579114-87579133 None:intergenic 35.0%
GTCTCACATTGGAAGATATA+AGG - Chr7:87578501-87578520 None:intergenic 35.0%
GTCTGCTTCTTCTTGATTAT+CGG + Chr7:87581015-87581034 MsG0780041173.01.T01:intron 35.0%
GTGTCAAAATTTACCTGATC+AGG - Chr7:87581178-87581197 None:intergenic 35.0%
GTTCATGATTAGGAGTTCTA+GGG + Chr7:87579484-87579503 MsG0780041173.01.T01:intron 35.0%
GTTCATTATTGACAAGGAAG+GGG + Chr7:87581463-87581482 MsG0780041173.01.T01:CDS 35.0%
TAGATGCGATAGTCTATGTT+TGG + Chr7:87577702-87577721 MsG0780041173.01.T01:intron 35.0%
TATTCACTGCAATGCAACAA+TGG - Chr7:87578540-87578559 None:intergenic 35.0%
TATTTCATTCATTTGCGTGC+TGG + Chr7:87578679-87578698 MsG0780041173.01.T01:intron 35.0%
TCACCTCACATTAGCAATTT+AGG - Chr7:87579967-87579986 None:intergenic 35.0%
TGCAAGTCCAATGCATATAT+GGG - Chr7:87581680-87581699 None:intergenic 35.0%
TTCCCTAAATTGCTAATGTG+AGG + Chr7:87579961-87579980 MsG0780041173.01.T01:intron 35.0%
TTGACTAAAAATGACCCGTT+TGG + Chr7:87577956-87577975 MsG0780041173.01.T01:intron 35.0%
! ATGTGGTGGAGAAGATAATT+TGG - Chr7:87577473-87577492 None:intergenic 35.0%
! CCCAACCTAAAATTCTAAGA+TGG - Chr7:87578410-87578429 None:intergenic 35.0%
! CGCTAACTTTTACCAAATAG+AGG + Chr7:87578275-87578294 MsG0780041173.01.T01:intron 35.0%
! TATCCTCTTTTTCTACCCAT+TGG + Chr7:87579008-87579027 MsG0780041173.01.T01:CDS 35.0%
! TGTGGTGGAGAAGATAATTT+GGG - Chr7:87577472-87577491 None:intergenic 35.0%
! TTGGTGACATCAGATACTAA+AGG - Chr7:87581124-87581143 None:intergenic 35.0%
! TTGTGTAGTTTCTAGGTTGA+GGG + Chr7:87579641-87579660 MsG0780041173.01.T01:intron 35.0%
!! AAATTAGTTTGCTGGTCTAG+TGG - Chr7:87579769-87579788 None:intergenic 35.0%
!! AGTAGTGAATAGCTTTGTCT+AGG + Chr7:87581328-87581347 MsG0780041173.01.T01:intron 35.0%
!!! ACGGGTCATTTTTAGTCAAA+TGG - Chr7:87577955-87577974 None:intergenic 35.0%
!!! TAGCAAAGAGTACTTTTCTG+CGG + Chr7:87581790-87581809 MsG0780041173.01.T01:CDS 35.0%
!!! TCTTATTTTTTAGGTGGGGT+TGG + Chr7:87577308-87577327 MsG0780041173.01.T01:five_prime_UTR 35.0%
AAACATGGGAGCTATGAGAT+TGG + Chr7:87580274-87580293 MsG0780041173.01.T01:intron 40.0%
AAATGTGGTCATTCCTGGTA+TGG - Chr7:87581588-87581607 None:intergenic 40.0%
AACATGGGAGCTATGAGATT+GGG + Chr7:87580275-87580294 MsG0780041173.01.T01:intron 40.0%
AAGAGCGAACTACCATTAGT+TGG + Chr7:87578821-87578840 MsG0780041173.01.T01:intron 40.0%
AAGTGCGTTGTGTAGTTTCT+AGG + Chr7:87579634-87579653 MsG0780041173.01.T01:intron 40.0%
AGAGCGAACTACCATTAGTT+GGG + Chr7:87578822-87578841 MsG0780041173.01.T01:intron 40.0%
AGTCCAATGGGTAGAAAAAG+AGG - Chr7:87579014-87579033 None:intergenic 40.0%
ATAGACCACAGTTTAGATCG+TGG - Chr7:87581200-87581219 None:intergenic 40.0%
ATGAAATTTGCACCTGACAG+TGG + Chr7:87579609-87579628 MsG0780041173.01.T01:intron 40.0%
ATGGACACATGCACAACATT+AGG + Chr7:87578352-87578371 MsG0780041173.01.T01:intron 40.0%
ATGGAGAGAGAAGAAAGATG+TGG - Chr7:87577490-87577509 None:intergenic 40.0%
CACATAAGCTCAACAAAGAG+GGG - Chr7:87577629-87577648 None:intergenic 40.0%
CATATATGCATTGGACTTGC+AGG + Chr7:87581679-87581698 MsG0780041173.01.T01:intron 40.0%
CATCTGTAGTCAGAAGATCA+AGG - Chr7:87580889-87580908 None:intergenic 40.0%
CATTCTACCATCAACAACCT+CGG + Chr7:87581494-87581513 MsG0780041173.01.T01:CDS 40.0%
CTGCAAGTCCAATGCATATA+TGG - Chr7:87581681-87581700 None:intergenic 40.0%
GAAAGCGATTGTTACCAAAC+GGG - Chr7:87577973-87577992 None:intergenic 40.0%
GAAGATAAGAGAGAAGCAGA+TGG - Chr7:87577427-87577446 None:intergenic 40.0%
GACACAGATCCGAAAAAAAG+TGG - Chr7:87581395-87581414 None:intergenic 40.0%
GCAAGTCCAATGCATATATG+GGG - Chr7:87581679-87581698 None:intergenic 40.0%
GTTCAAACAGACAGAAAGTC+CGG + Chr7:87581076-87581095 MsG0780041173.01.T01:CDS 40.0%
GTTTGTCCCCATATATGCAT+TGG + Chr7:87581670-87581689 MsG0780041173.01.T01:intron 40.0%
TAAGTTCCGCAAATTCTGCA+TGG - Chr7:87579161-87579180 None:intergenic 40.0%
TAATGCATGCATGTGCTAGT+AGG - Chr7:87580929-87580948 None:intergenic 40.0%
TAGGTAGCCCAATGAATCTT+TGG + Chr7:87578371-87578390 MsG0780041173.01.T01:intron 40.0%
TAGTTTAGGGAGAGAATTGG+AGG - Chr7:87577521-87577540 None:intergenic 40.0%
TCATCACACTCACTCAAACA+TGG + Chr7:87577390-87577409 MsG0780041173.01.T01:exon 40.0%
TGACTAAATGTGGTCATTCC+TGG - Chr7:87581593-87581612 None:intergenic 40.0%
TTCAACGCTTATAAGCCTCA+AGG - Chr7:87578644-87578663 None:intergenic 40.0%
TTCAGATTCTTCTTCACTGG+TGG + Chr7:87580134-87580153 MsG0780041173.01.T01:intron 40.0%
! AACTGCTCATCTGTATCGAT+TGG + Chr7:87581847-87581866 MsG0780041173.01.T01:three_prime_UTR 40.0%
! AAGCTTTAACGACGAAACTG+CGG - Chr7:87577588-87577607 None:intergenic 40.0%
! AAGTTTAGGGTCTGGTTTCA+TGG - Chr7:87581771-87581790 None:intergenic 40.0%
! ATCGGTGTACACCTTGATTT+TGG + Chr7:87581947-87581966 MsG0780041173.01.T01:three_prime_UTR 40.0%
! ATCTGAATTGTTGTTGGCCA+TGG - Chr7:87580121-87580140 None:intergenic 40.0%
! ATTTAGGGGATAGCATTGAG+AGG + Chr7:87581437-87581456 MsG0780041173.01.T01:intron 40.0%
! ATTTGTTACGCGTCTCACAT+TGG - Chr7:87578512-87578531 None:intergenic 40.0%
! GTTGTGTAGTTTCTAGGTTG+AGG + Chr7:87579640-87579659 MsG0780041173.01.T01:intron 40.0%
! TCTTTGCTAAGTTTAGGGTC+TGG - Chr7:87581779-87581798 None:intergenic 40.0%
!! ACTGCTCATCTGTATCGATT+GGG + Chr7:87581848-87581867 MsG0780041173.01.T01:three_prime_UTR 40.0%
!! GAGGCTTATAAGCGTTGAAA+TGG + Chr7:87578645-87578664 MsG0780041173.01.T01:intron 40.0%
!! GGTTGTTGATGGTAGAATGT+TGG - Chr7:87581493-87581512 None:intergenic 40.0%
!! GTATCGATTGGGGATGTAAA+AGG + Chr7:87581859-87581878 MsG0780041173.01.T01:three_prime_UTR 40.0%
AAAACTAAGGAGTCCAGTGG+CGG - Chr7:87580734-87580753 None:intergenic 45.0%
AACGCTTATAAGCCTCAAGG+AGG - Chr7:87578641-87578660 None:intergenic 45.0%
ACAGCCTCAGCTTCAAAATC+TGG - Chr7:87578857-87578876 None:intergenic 45.0%
ACCAATTCCGAGGTTGTTGA+TGG - Chr7:87581504-87581523 None:intergenic 45.0%
ACCATCAACAACCTCGGAAT+TGG + Chr7:87581500-87581519 MsG0780041173.01.T01:CDS 45.0%
ACCGTAAGGATACCAGACAT+AGG + Chr7:87580479-87580498 MsG0780041173.01.T01:intron 45.0%
AGAATTGGAGGAATTGGGGA+TGG - Chr7:87577509-87577528 None:intergenic 45.0%
AGGGAGAGAATTGGAGGAAT+TGG - Chr7:87577515-87577534 None:intergenic 45.0%
ATCTTCTTCCTCCCTATGTC+TGG - Chr7:87580494-87580513 None:intergenic 45.0%
CAACACTTCTACCAATTCCG+AGG - Chr7:87581514-87581533 None:intergenic 45.0%
CCCTATGTCTGGTATCCTTA+CGG - Chr7:87580483-87580502 None:intergenic 45.0%
CCGTAAGGATACCAGACATA+GGG + Chr7:87580480-87580499 MsG0780041173.01.T01:intron 45.0%
CTTCGGTAGCAGATATGCAT+AGG - Chr7:87579401-87579420 None:intergenic 45.0%
GAGAGAGAAGAAAGATGTGG+TGG - Chr7:87577487-87577506 None:intergenic 45.0%
GCAATCTTCACCTTACGAGT+CGG - Chr7:87578453-87578472 None:intergenic 45.0%
GCGTAGTTTAGGGAGAGAAT+TGG - Chr7:87577524-87577543 None:intergenic 45.0%
GGAGAGAATTGGAGGAATTG+GGG - Chr7:87577513-87577532 None:intergenic 45.0%
GGGAGAGAATTGGAGGAATT+GGG - Chr7:87577514-87577533 None:intergenic 45.0%
TAAGGATACCAGACATAGGG+AGG + Chr7:87580483-87580502 MsG0780041173.01.T01:intron 45.0%
TCAACGAATTCGTTGACACC+TGG + Chr7:87580615-87580634 MsG0780041173.01.T01:intron 45.0%
TCATTCCTGGTATGGTGCAT+TGG - Chr7:87581580-87581599 None:intergenic 45.0%
TGAAATAGTGTCCGAATGGG+TGG + Chr7:87577263-87577282 MsG0780041173.01.T01:five_prime_UTR 45.0%
TGACACCACGATCTAAACTG+TGG + Chr7:87581192-87581211 MsG0780041173.01.T01:intron 45.0%
TGAGACAAAGAGAACACTCC+AGG + Chr7:87581535-87581554 MsG0780041173.01.T01:CDS 45.0%
TGGGAGAGAAGAGGATGTTA+GGG - Chr7:87577453-87577472 None:intergenic 45.0%
TGGTGTTCTCATTCCTGATC+AGG + Chr7:87581162-87581181 MsG0780041173.01.T01:CDS 45.0%
TGTCTGTTTGAACCCATGCA+AGG - Chr7:87581069-87581088 None:intergenic 45.0%
TTCACATTTGTTTGCCCCAC+AGG + Chr7:87579033-87579052 MsG0780041173.01.T01:CDS 45.0%
TTCTTCCATACGGATGTAGC+CGG - Chr7:87580772-87580791 None:intergenic 45.0%
TTGGGAGAGAAGAGGATGTT+AGG - Chr7:87577454-87577473 None:intergenic 45.0%
TTGGTGTGTCTCCAAAGAGA+TGG - Chr7:87580050-87580069 None:intergenic 45.0%
! ATTCTTCTTCACTGGTGGTG+TGG + Chr7:87580139-87580158 MsG0780041173.01.T01:intron 45.0%
! TACTTTTCTGCGGTGTAGTG+TGG + Chr7:87581800-87581819 MsG0780041173.01.T01:exon 45.0%
! TTTGGCTTCTTCTACCTCAC+AGG + Chr7:87577366-87577385 MsG0780041173.01.T01:five_prime_UTR 45.0%
!! AAAAAACGTGAAGGGTGCCA+CGG - Chr7:87579561-87579580 None:intergenic 45.0%
!! CCTTACAAAACCGACTCGTA+AGG + Chr7:87578440-87578459 MsG0780041173.01.T01:intron 45.0%
!! CCTTACGAGTCGGTTTTGTA+AGG - Chr7:87578443-87578462 None:intergenic 45.0%
!! CTGCTCATCTGTATCGATTG+GGG + Chr7:87581849-87581868 MsG0780041173.01.T01:three_prime_UTR 45.0%
!! CTTTAGGAGTGCCTTTGGAT+TGG - Chr7:87580996-87581015 None:intergenic 45.0%
!! GAGTTCTAGGGAAATCTGCA+TGG + Chr7:87579496-87579515 MsG0780041173.01.T01:intron 45.0%
!!! AGCTGAGGCTGTTTTTGATC+AGG + Chr7:87578865-87578884 MsG0780041173.01.T01:CDS 45.0%
AAGCCTCAAGGAGGAAGAGT+CGG - Chr7:87578632-87578651 None:intergenic 50.0%
AATAGTGTCCGAATGGGTGG+AGG + Chr7:87577266-87577285 MsG0780041173.01.T01:five_prime_UTR 50.0%
AGAAGAAGAGGAGCGGTTGA+GGG - Chr7:87577563-87577582 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAC+AGG + Chr7:87579857-87579876 MsG0780041173.01.T01:intron 50.0%
ATCTGCATGGACTCCTTCAG+TGG + Chr7:87579509-87579528 MsG0780041173.01.T01:intron 50.0%
ATGCTTCACCTCCACCCATT+CGG - Chr7:87577277-87577296 None:intergenic 50.0%
CAAACAGACAGAAAGTCCGG+TGG + Chr7:87581079-87581098 MsG0780041173.01.T01:CDS 50.0%
CAACGCACTTAACCACTGTC+AGG - Chr7:87579624-87579643 None:intergenic 50.0%
CATTTGTTTGCCCCACAGGT+TGG + Chr7:87579037-87579056 MsG0780041173.01.T01:intron 50.0%
GGGTGTTTCAGTTGACAGTG+TGG + Chr7:87579194-87579213 MsG0780041173.01.T01:CDS 50.0%
GGTTTCATGGACTTCTCACC+AGG - Chr7:87581758-87581777 None:intergenic 50.0%
GTAGTTCTCGCACCTTGCAT+GGG + Chr7:87581054-87581073 MsG0780041173.01.T01:intron 50.0%
GTTAGGATCCGTTTGACACC+AGG - Chr7:87580636-87580655 None:intergenic 50.0%
GTTCCGCAAATTCTGCATGG+CGG - Chr7:87579158-87579177 None:intergenic 50.0%
GTTCTCCTGCACGTATTGCA+AGG - Chr7:87581705-87581724 None:intergenic 50.0%
TAAAGGGTCGACCAACCTGT+GGG - Chr7:87579051-87579070 None:intergenic 50.0%
TCAACGAATCCGTTGACACC+TGG - Chr7:87579894-87579913 None:intergenic 50.0%
TGACCGCCATGCAGAATTTG+CGG + Chr7:87579152-87579171 MsG0780041173.01.T01:CDS 50.0%
TGTAGTTCTCGCACCTTGCA+TGG + Chr7:87581053-87581072 MsG0780041173.01.T01:intron 50.0%
TGTCTGGTATCCTTACGGTC+AGG - Chr7:87580478-87580497 None:intergenic 50.0%
TGTGGAAGAACCTGACCGTA+AGG + Chr7:87580465-87580484 MsG0780041173.01.T01:intron 50.0%
TTGCACCAATGCACCATACC+AGG + Chr7:87581572-87581591 MsG0780041173.01.T01:intron 50.0%
TTTCAATCAAGCTCCGCCAC+TGG + Chr7:87580718-87580737 MsG0780041173.01.T01:intron 50.0%
! CGTTGACACCTGGTGTCAAA+CGG + Chr7:87580625-87580644 MsG0780041173.01.T01:intron 50.0%
! GGAGGGAAGTGCGTAGTTTA+GGG - Chr7:87577534-87577553 None:intergenic 50.0%
!! GCAGACTTTAGGAGTGCCTT+TGG - Chr7:87581001-87581020 None:intergenic 50.0%
!!! TGCGCCAGATTTTGAAGCTG+AGG + Chr7:87578850-87578869 MsG0780041173.01.T01:CDS 50.0%
AAAGGGTCGACCAACCTGTG+GGG - Chr7:87579050-87579069 None:intergenic 55.0%
AGAAGCAGATGGAGCTGAGC+AGG - Chr7:87577416-87577435 None:intergenic 55.0%
AGACAGGATCCGTTGACACC+AGG + Chr7:87579873-87579892 MsG0780041173.01.T01:intron 55.0%
AGCCTCAAGGAGGAAGAGTC+GGG - Chr7:87578631-87578650 None:intergenic 55.0%
AGGAGCGGTTGAGGGAAAGA+GGG - Chr7:87577555-87577574 None:intergenic 55.0%
ATGAAGTTTGCCCTGCTGGG+TGG + Chr7:87581729-87581748 MsG0780041173.01.T01:CDS 55.0%
CAGCAGGGCAAACTTCATCG+GGG - Chr7:87581727-87581746 None:intergenic 55.0%
CCAGCAGGGCAAACTTCATC+GGG - Chr7:87581728-87581747 None:intergenic 55.0%
CCCAGCAGGGCAAACTTCAT+CGG - Chr7:87581729-87581748 None:intergenic 55.0%
CCGATGAAGTTTGCCCTGCT+GGG + Chr7:87581726-87581745 MsG0780041173.01.T01:CDS 55.0%
CCGTTGACACCAGGTGTCAA+CGG + Chr7:87579882-87579901 MsG0780041173.01.T01:intron 55.0%
CTAAAGGGTCGACCAACCTG+TGG - Chr7:87579052-87579071 None:intergenic 55.0%
GAAACTGCGGCGAGAAGAAG+AGG - Chr7:87577575-87577594 None:intergenic 55.0%
GAATGGGTGGAGGTGAAGCA+TGG + Chr7:87577276-87577295 MsG0780041173.01.T01:five_prime_UTR 55.0%
GACAGAAAGTCCGGTGGTCT+CGG + Chr7:87581085-87581104 MsG0780041173.01.T01:CDS 55.0%
GAGAAGAAGAGGAGCGGTTG+AGG - Chr7:87577564-87577583 None:intergenic 55.0%
GTGAGTGTGATGAGCCTGTG+AGG - Chr7:87577383-87577402 None:intergenic 55.0%
GTTCAAGTCACCGAGACCAC+CGG - Chr7:87581098-87581117 None:intergenic 55.0%
TGCAACCGGCTACATCCGTA+TGG + Chr7:87580764-87580783 MsG0780041173.01.T01:intron 55.0%
TGCATGGACTCCTTCAGTGG+CGG + Chr7:87579512-87579531 MsG0780041173.01.T01:intron 55.0%
TTCCCGACTCTTCCTCCTTG+AGG + Chr7:87578626-87578645 MsG0780041173.01.T01:intron 55.0%
! CCGTTGACACCTGGTGTCAA+CGG - Chr7:87579885-87579904 None:intergenic 55.0%
! GGGAGGGAAGTGCGTAGTTT+AGG - Chr7:87577535-87577554 None:intergenic 55.0%
! TTCAGTGGCGGGGCTTCTAT+GGG + Chr7:87579524-87579543 MsG0780041173.01.T01:intron 55.0%
ACGGATGTAGCCGGTTGCAG+AGG - Chr7:87580763-87580782 None:intergenic 60.0%
AGCGGTTGAGGGAAAGAGGG+AGG - Chr7:87577552-87577571 None:intergenic 60.0%
CATAGAAGCCCCGCCACTGA+AGG - Chr7:87579525-87579544 None:intergenic 60.0%
CATGGACTCCTTCAGTGGCG+GGG + Chr7:87579514-87579533 MsG0780041173.01.T01:intron 60.0%
CCCGATGAAGTTTGCCCTGC+TGG + Chr7:87581725-87581744 MsG0780041173.01.T01:CDS 60.0%
GAGGAGCGGTTGAGGGAAAG+AGG - Chr7:87577556-87577575 None:intergenic 60.0%
GCAGGCCTTGCAATACGTGC+AGG + Chr7:87581697-87581716 MsG0780041173.01.T01:intron 60.0%
GCATGGACTCCTTCAGTGGC+GGG + Chr7:87579513-87579532 MsG0780041173.01.T01:intron 60.0%
GCGGTTGAGGGAAAGAGGGA+GGG - Chr7:87577551-87577570 None:intergenic 60.0%
GGCGCAGCGTTCCCAACTAA+TGG - Chr7:87578836-87578855 None:intergenic 60.0%
TATGGGCCGGGTTAATGCCG+TGG + Chr7:87579541-87579560 MsG0780041173.01.T01:intron 60.0%
TGCGGCGAGAAGAAGAGGAG+CGG - Chr7:87577570-87577589 None:intergenic 60.0%
! AGGGTGCCACGGCATTAACC+CGG - Chr7:87579550-87579569 None:intergenic 60.0%
! CTTCAGTGGCGGGGCTTCTA+TGG + Chr7:87579523-87579542 MsG0780041173.01.T01:intron 60.0%
AGGTGGGGTTGGAGCCTCTG+AGG + Chr7:87577319-87577338 MsG0780041173.01.T01:five_prime_UTR 65.0%
CACCAGGCTTCCACCCAGCA+GGG - Chr7:87581742-87581761 None:intergenic 65.0%
TCACCAGGCTTCCACCCAGC+AGG - Chr7:87581743-87581762 None:intergenic 65.0%
TGCCCTGCTGGGTGGAAGCC+TGG + Chr7:87581737-87581756 MsG0780041173.01.T01:CDS 70.0%
TGGCGGGGCTTCTATGGGCC+GGG + Chr7:87579529-87579548 MsG0780041173.01.T01:intron 70.0%
! GTGGCGGGGCTTCTATGGGC+CGG + Chr7:87579528-87579547 MsG0780041173.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 87577242 87582106 87577242 ID=MsG0780041173.01;Name=MsG0780041173.01
Chr7 mRNA 87577242 87582106 87577242 ID=MsG0780041173.01.T01;Parent=MsG0780041173.01;Name=MsG0780041173.01.T01;_AED=0.45;_eAED=0.45;_QI=167|1|1|1|0.83|0.71|7|289|264
Chr7 exon 87577242 87577609 87577242 ID=MsG0780041173.01.T01:exon:52213;Parent=MsG0780041173.01.T01
Chr7 exon 87578824 87578898 87578824 ID=MsG0780041173.01.T01:exon:52214;Parent=MsG0780041173.01.T01
Chr7 exon 87578973 87579054 87578973 ID=MsG0780041173.01.T01:exon:52215;Parent=MsG0780041173.01.T01
Chr7 exon 87579136 87579215 87579136 ID=MsG0780041173.01.T01:exon:52216;Parent=MsG0780041173.01.T01
Chr7 exon 87581058 87581183 87581058 ID=MsG0780041173.01.T01:exon:52217;Parent=MsG0780041173.01.T01
Chr7 exon 87581443 87581556 87581443 ID=MsG0780041173.01.T01:exon:52218;Parent=MsG0780041173.01.T01
Chr7 exon 87581701 87582106 87581701 ID=MsG0780041173.01.T01:exon:52219;Parent=MsG0780041173.01.T01
Chr7 five_prime_UTR 87577242 87577408 87577242 ID=MsG0780041173.01.T01:five_prime_utr;Parent=MsG0780041173.01.T01
Chr7 CDS 87577409 87577609 87577409 ID=MsG0780041173.01.T01:cds;Parent=MsG0780041173.01.T01
Chr7 CDS 87578824 87578898 87578824 ID=MsG0780041173.01.T01:cds;Parent=MsG0780041173.01.T01
Chr7 CDS 87578973 87579054 87578973 ID=MsG0780041173.01.T01:cds;Parent=MsG0780041173.01.T01
Chr7 CDS 87579136 87579215 87579136 ID=MsG0780041173.01.T01:cds;Parent=MsG0780041173.01.T01
Chr7 CDS 87581058 87581183 87581058 ID=MsG0780041173.01.T01:cds;Parent=MsG0780041173.01.T01
Chr7 CDS 87581443 87581556 87581443 ID=MsG0780041173.01.T01:cds;Parent=MsG0780041173.01.T01
Chr7 CDS 87581701 87581817 87581701 ID=MsG0780041173.01.T01:cds;Parent=MsG0780041173.01.T01
Chr7 three_prime_UTR 87581818 87582106 87581818 ID=MsG0780041173.01.T01:three_prime_utr;Parent=MsG0780041173.01.T01
Gene Sequence

>MsG0780041173.01.T01

ATGGCCTGCTCAGCTCCATCTGCTTCTCTCTTATCTTCAAACCCTAACATCCTCTTCTCTCCCAAATTATCTTCTCCACCACATCTTTCTTCTCTCTCCATCCCCAATTCCTCCAATTCTCTCCCTAAACTACGCACTTCCCTCCCTCTTTCCCTCAACCGCTCCTCTTCTTCTCGCCGCAGTTTCGTCGTTAAAGCTTCTAGCGAACTACCATTAGTTGGGAACGCTGCGCCAGATTTTGAAGCTGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTTAAACTATCTGAATATATTGGGAAGAAATATGTTATCCTCTTTTTCTACCCATTGGACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCAGTGACCGCCATGCAGAATTTGCGGAACTTAATACAGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCACCTTGCATGGGTTCAAACAGACAGAAAGTCCGGTGGTCTCGGTGACTTGAACTATCCTTTAGTATCTGATGTCACCAAATCCATATCAAAATCTTATGGTGTTCTCATTCCTGATCAGGGGATAGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATCCAACATTCTACCATCAACAACCTCGGAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCCTTGCAATACGTGCAGGAGAACCCCGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTTTCTGCGGTGTAG

Protein sequence

>MsG0780041173.01.T01

MACSAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNSSNSLPKLRTSLPLSLNRSSSSRRSFVVKASSELPLVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAV*