AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008863.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008863.01.T01 MTR_2g449830 92.874 421 24 1 4 424 6 420 0.0 762
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008863.01.T01 AT2G22650 56.867 415 160 4 19 418 6 416 3.23e-161 461
MsG0280008863.01.T01 AT2G22650 58.446 296 118 2 124 418 3 294 5.58e-127 369
MsG0280008863.01.T01 AT2G22650 58.446 296 118 2 124 418 3 294 5.58e-127 369

Find 56 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAATTACTTCTTCATTAC+AGG 0.181074 2:-40180863 None:intergenic
CCCTAGGTGTCTTTAAATTA+AGG 0.182750 2:+40180988 MsG0280008863.01.T01:exon
AGTTGTAAGTATTGGTTATT+TGG 0.214020 2:+40180772 MsG0280008863.01.T01:exon
ACATGGATCGCTTCCACTTC+TGG 0.214988 2:+40180717 MsG0280008863.01.T01:exon
GACAATTGAATTCTAAAGTT+TGG 0.265520 2:-40180917 None:intergenic
AATCCATGCATCTGATAATA+TGG 0.287035 2:-40180491 None:intergenic
ATAACCAATACTTACAACTA+TGG 0.303357 2:-40180768 None:intergenic
GAAAACCCAATCCTTTATTC+CGG 0.342382 2:-40180650 None:intergenic
CATGGATCGCTTCCACTTCT+GGG 0.364062 2:+40180718 MsG0280008863.01.T01:exon
AGTCATTTATCCCGGAATAA+AGG 0.366833 2:+40180639 MsG0280008863.01.T01:exon
AGATGCATGGATTTCTGTTC+AGG 0.375339 2:+40180501 MsG0280008863.01.T01:exon
AAGACTATTCCTCCAGCTAA+TGG 0.378849 2:-40181154 None:intergenic
GTCTAAATGTTGGGTCAACT+TGG 0.393363 2:+40180533 MsG0280008863.01.T01:exon
TCAAGAGGATTGTTATATCA+TGG 0.430914 2:+40180805 MsG0280008863.01.T01:exon
TTCCATCTGAGTTGACTACT+TGG 0.437844 2:+40180881 MsG0280008863.01.T01:exon
GGTTGTATTAACGATTTCAT+TGG 0.438305 2:+40180739 MsG0280008863.01.T01:exon
TAAGTATATTCAAATTCAAA+TGG 0.441820 2:+40181054 MsG0280008863.01.T01:exon
TATTGGTTATTTGGAGGACT+AGG 0.452045 2:+40180781 MsG0280008863.01.T01:exon
TTTATCCCGGAATAAAGGAT+TGG 0.453765 2:+40180644 MsG0280008863.01.T01:exon
TGGTTGGCTAGGTAGTTTGA+TGG 0.454075 2:+40180825 MsG0280008863.01.T01:exon
GAAACCATAGTTGTAAGTAT+TGG 0.454184 2:+40180764 MsG0280008863.01.T01:exon
TTATCCCGGAATAAAGGATT+GGG 0.454396 2:+40180645 MsG0280008863.01.T01:exon
GCTGGAGGAATAGTCTTGTT+GGG 0.454626 2:+40181160 MsG0280008863.01.T01:exon
AAAACCCAATCCTTTATTCC+GGG 0.457063 2:-40180649 None:intergenic
AGCTGGAGGAATAGTCTTGT+TGG 0.466845 2:+40181159 MsG0280008863.01.T01:exon
TGTAAGTATTGGTTATTTGG+AGG 0.485239 2:+40180775 MsG0280008863.01.T01:exon
TGGAGCAAAAGCTGGTTTGA+GGG 0.487851 2:+40180675 MsG0280008863.01.T01:exon
TTCAGGTGTTATCCTGAGCA+TGG 0.490494 2:+40180463 MsG0280008863.01.T01:intron
CTGGAGCAAAAGCTGGTTTG+AGG 0.492766 2:+40180674 MsG0280008863.01.T01:exon
GATGCATGGATTTCTGTTCA+GGG 0.493865 2:+40180502 MsG0280008863.01.T01:exon
GGATAAATGACTGATGCCTT+CGG 0.496258 2:-40180628 None:intergenic
GGCTCCCGCAGTCTAAATGT+TGG 0.516611 2:+40180523 MsG0280008863.01.T01:exon
GAGGATTGTTATATCATGGT+TGG 0.516934 2:+40180809 MsG0280008863.01.T01:exon
GCTCCCGCAGTCTAAATGTT+GGG 0.519128 2:+40180524 MsG0280008863.01.T01:exon
TTGTTATATCATGGTTGGCT+AGG 0.521087 2:+40180814 MsG0280008863.01.T01:exon
CTTCCATATTATCAGATGCA+TGG 0.523672 2:+40180488 MsG0280008863.01.T01:exon
TTCCAAGTAGTCAACTCAGA+TGG 0.537769 2:-40180883 None:intergenic
TGACCCAACATTTAGACTGC+GGG 0.542533 2:-40180527 None:intergenic
AATATGGAAGGTCCATGCTC+AGG 0.543184 2:-40180475 None:intergenic
AAATTGAAGAAACCATTAGC+TGG 0.569586 2:+40181142 MsG0280008863.01.T01:exon
TTTGGAGGACTAGGTTCAAG+AGG 0.570574 2:+40180790 MsG0280008863.01.T01:exon
ATGTTGGGTCAACTTGGGAG+TGG 0.575664 2:+40180539 MsG0280008863.01.T01:exon
AGCGATCCATGTGGCGTGAG+TGG 0.578662 2:-40180706 None:intergenic
AAGGCATCAGTCATTTATCC+CGG 0.588732 2:+40180631 MsG0280008863.01.T01:exon
TCGTTAATACAACCCAGAAG+TGG 0.592302 2:-40180730 None:intergenic
GATCCATGTGGCGTGAGTGG+AGG 0.596844 2:-40180703 None:intergenic
TCTAAATGTTGGGTCAACTT+GGG 0.597738 2:+40180534 MsG0280008863.01.T01:exon
ATGCCTCCACTCACGCCACA+TGG 0.599791 2:+40180700 MsG0280008863.01.T01:exon
CATGCATCTGATAATATGGA+AGG 0.608929 2:-40180487 None:intergenic
CCTTAATTTAAAGACACCTA+GGG 0.611738 2:-40180988 None:intergenic
ACCTTAATTTAAAGACACCT+AGG 0.614282 2:-40180989 None:intergenic
TCTTCATCAGCTACTGCCGA+AGG 0.624818 2:+40180612 MsG0280008863.01.T01:exon
ACTGTTGATATTGCATGACA+AGG 0.660960 2:-40181085 None:intergenic
TTGAAGAAACCATTAGCTGG+AGG 0.664608 2:+40181145 MsG0280008863.01.T01:exon
TTGACCCAACATTTAGACTG+CGG 0.672778 2:-40180528 None:intergenic
AGAAGTGGAAGCGATCCATG+TGG 0.754617 2:-40180715 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATATTATATTATTATT+AGG + Chr2:40177146-40177165 MsG0280008863.01.T01:intron 0.0%
!! CAAATTAATAGTAATTAAAA+TGG + Chr2:40178790-40178809 MsG0280008863.01.T01:intron 10.0%
!! TCATAAAATAATTTATTGTT+GGG + Chr2:40177593-40177612 MsG0280008863.01.T01:intron 10.0%
!! TTCATAAAATAATTTATTGT+TGG + Chr2:40177592-40177611 MsG0280008863.01.T01:intron 10.0%
!!! AAATTATTTTATGAAACAAT+TGG - Chr2:40177587-40177606 None:intergenic 10.0%
!! AAATTAGTGGAATTAAAATT+TGG + Chr2:40177735-40177754 MsG0280008863.01.T01:intron 15.0%
!! AATTAGTGGAATTAAAATTT+GGG + Chr2:40177736-40177755 MsG0280008863.01.T01:intron 15.0%
!! ATTCATTTATATGATGAATT+TGG + Chr2:40176432-40176451 MsG0280008863.01.T01:CDS 15.0%
!! GAAAAATAAAAAATTAGTGA+TGG - Chr2:40177085-40177104 None:intergenic 15.0%
!! TAAGTATATTCAAATTCAAA+TGG + Chr2:40181054-40181073 MsG0280008863.01.T01:exon 15.0%
!! TTTATGCATTGTAATATATA+AGG - Chr2:40178884-40178903 None:intergenic 15.0%
!!! ATAAAAAAAAACCTTTTATG+AGG - Chr2:40176699-40176718 None:intergenic 15.0%
!!! ATAATTAGTTTGAAGAAATA+AGG + Chr2:40179276-40179295 MsG0280008863.01.T01:intron 15.0%
!!! ATATATTTTATATTTTCCCT+AGG + Chr2:40180972-40180991 MsG0280008863.01.T01:exon 15.0%
!!! ATTATTTGTTATATTAGACT+TGG + Chr2:40176867-40176886 MsG0280008863.01.T01:intron 15.0%
!!! TTATTTGTTATATTAGACTT+GGG + Chr2:40176868-40176887 MsG0280008863.01.T01:intron 15.0%
!! AAAATACAACCAAACTATAA+AGG + Chr2:40179604-40179623 MsG0280008863.01.T01:intron 20.0%
!! ACTCAAAAAATAATGCAAAA+TGG - Chr2:40181016-40181035 None:intergenic 20.0%
!! AGAAATTACATCATTCAATT+TGG - Chr2:40176825-40176844 None:intergenic 20.0%
!! AGCATAGTATATTTAAATGA+AGG - Chr2:40180393-40180412 None:intergenic 20.0%
!! TAACAATAACTAACAAAGTA+AGG - Chr2:40179235-40179254 None:intergenic 20.0%
!! TACAAAAGCTAATTATGAAA+AGG + Chr2:40178173-40178192 MsG0280008863.01.T01:intron 20.0%
!! TATAGAAACTTAATCAGAAA+AGG - Chr2:40179416-40179435 None:intergenic 20.0%
!! TATATGATGAATTTGGTATT+GGG + Chr2:40176439-40176458 MsG0280008863.01.T01:CDS 20.0%
!! TGTAATATATAAGGAAGTAA+TGG - Chr2:40178875-40178894 None:intergenic 20.0%
!! TTACTTTGTTAGTTATTGTT+AGG + Chr2:40179234-40179253 MsG0280008863.01.T01:intron 20.0%
!! TTATATGATGAATTTGGTAT+TGG + Chr2:40176438-40176457 MsG0280008863.01.T01:CDS 20.0%
!!! AAGATGAAAAATATACCTTT+TGG - Chr2:40176510-40176529 None:intergenic 20.0%
!!! AGATGAAAAATATACCTTTT+GGG - Chr2:40176509-40176528 None:intergenic 20.0%
!!! ATTTTATGAAACAATTGGAA+CGG - Chr2:40177582-40177601 None:intergenic 20.0%
! AAAGTTTCCTTTAAATTGAG+CGG + Chr2:40177353-40177372 MsG0280008863.01.T01:intron 25.0%
! AAGTTAGAATAATTTCTTGG+AGG + Chr2:40178477-40178496 MsG0280008863.01.T01:intron 25.0%
! AATCTGAAAAATCTCTAGTT+TGG + Chr2:40180310-40180329 MsG0280008863.01.T01:intron 25.0%
! AATTAGTGAGATTAGAATAG+GGG + Chr2:40179344-40179363 MsG0280008863.01.T01:intron 25.0%
! AGAACAAAAACATAGGAATA+CGG + Chr2:40179169-40179188 MsG0280008863.01.T01:intron 25.0%
! AGAATCAAAGCAATACATTA+TGG - Chr2:40179791-40179810 None:intergenic 25.0%
! AGTTAGAATAATTTCTTGGA+GGG + Chr2:40178478-40178497 MsG0280008863.01.T01:intron 25.0%
! ATAACCAATACTTACAACTA+TGG - Chr2:40180771-40180790 None:intergenic 25.0%
! ATATGATGAATTTGGTATTG+GGG + Chr2:40176440-40176459 MsG0280008863.01.T01:CDS 25.0%
! ATGAAAGACTTACAATTGAA+TGG - Chr2:40177556-40177575 None:intergenic 25.0%
! ATGCCTGAAAATAATAATAG+GGG + Chr2:40179303-40179322 MsG0280008863.01.T01:intron 25.0%
! ATTAAAAAAAAACCCTTTCC+TGG + Chr2:40177813-40177832 MsG0280008863.01.T01:intron 25.0%
! ATTGGATTCAAGTATTCATA+TGG + Chr2:40179457-40179476 MsG0280008863.01.T01:intron 25.0%
! CAAGGTTATTATGTTAGTTA+GGG - Chr2:40176377-40176396 None:intergenic 25.0%
! CAATTAGTGAGATTAGAATA+GGG + Chr2:40179343-40179362 MsG0280008863.01.T01:intron 25.0%
! GAATCAAAGCAATACATTAT+GGG - Chr2:40179790-40179809 None:intergenic 25.0%
! GATGCCTGAAAATAATAATA+GGG + Chr2:40179302-40179321 MsG0280008863.01.T01:intron 25.0%
! GTGAAGTTAGAATAATTTCT+TGG + Chr2:40178474-40178493 MsG0280008863.01.T01:intron 25.0%
! TAAGTTAAGATGTCTTTATG+AGG - Chr2:40177531-40177550 None:intergenic 25.0%
! TAATTGAATGTATAAATCCC+TGG - Chr2:40177793-40177812 None:intergenic 25.0%
! TCACTAGTATGAAAAATGAT+AGG - Chr2:40180020-40180039 None:intergenic 25.0%
! TGAAAGACTTACAATTGAAT+GGG - Chr2:40177555-40177574 None:intergenic 25.0%
! TGATGCCTGAAAATAATAAT+AGG + Chr2:40179301-40179320 MsG0280008863.01.T01:intron 25.0%
! TTACACAAAAAATCTATCCA+TGG + Chr2:40177240-40177259 MsG0280008863.01.T01:CDS 25.0%
!! AAATCTTTTACGGTTTAGTT+AGG + Chr2:40177658-40177677 MsG0280008863.01.T01:intron 25.0%
!! AATGCAAGATGATTCTAAAA+TGG - Chr2:40180439-40180458 None:intergenic 25.0%
!! ATATTTAAGTTCAACTCCTT+AGG - Chr2:40176414-40176433 None:intergenic 25.0%
!! CATGATAGGTAAATCTTTTA+CGG + Chr2:40177648-40177667 MsG0280008863.01.T01:intron 25.0%
!! GATGAAAAATATACCTTTTG+GGG - Chr2:40176508-40176527 None:intergenic 25.0%
!! TCATTCAGTTATTTCGATAA+AGG - Chr2:40178841-40178860 None:intergenic 25.0%
!! TCTTTGTTTCCTTTATAGTT+TGG - Chr2:40179616-40179635 None:intergenic 25.0%
!! TTAAATATCTTTCAAGTCTC+AGG + Chr2:40180126-40180145 MsG0280008863.01.T01:intron 25.0%
!!! AGTTGTAAGTATTGGTTATT+TGG + Chr2:40180772-40180791 MsG0280008863.01.T01:exon 25.0%
!!! ATGCAAGATGATTCTAAAAT+GGG - Chr2:40180438-40180457 None:intergenic 25.0%
!!! GACAATTGAATTCTAAAGTT+TGG - Chr2:40180920-40180939 None:intergenic 25.0%
!!! GATAAACTTCATGTTTTGTT+TGG - Chr2:40178084-40178103 None:intergenic 25.0%
!!! TGCATTATTTTTTGAGTGAA+AGG + Chr2:40181019-40181038 MsG0280008863.01.T01:exon 25.0%
AAAACTGAACACATAACTGT+CGG + Chr2:40178916-40178935 MsG0280008863.01.T01:intron 30.0%
AAACTTTACCTCGTATAATC+AGG - Chr2:40180264-40180283 None:intergenic 30.0%
AAATTGAAGAAACCATTAGC+TGG + Chr2:40181142-40181161 MsG0280008863.01.T01:exon 30.0%
AACTTGTATGTGTATTGTTG+TGG + Chr2:40179537-40179556 MsG0280008863.01.T01:intron 30.0%
AAGGTATGTTGCCTATAAAT+AGG + Chr2:40177687-40177706 MsG0280008863.01.T01:intron 30.0%
AAGTTTATCTTCATGCTTCT+AGG + Chr2:40178095-40178114 MsG0280008863.01.T01:intron 30.0%
AATCCATGCATCTGATAATA+TGG - Chr2:40180494-40180513 None:intergenic 30.0%
AATTGAGAGAATTGGTATTG+AGG - Chr2:40179739-40179758 None:intergenic 30.0%
ACCTTAATTTAAAGACACCT+AGG - Chr2:40180992-40181011 None:intergenic 30.0%
ACGTCAGTGAGAATATTTAT+TGG + Chr2:40179439-40179458 MsG0280008863.01.T01:intron 30.0%
AGCAATTGTGAAAAGGTTTA+TGG - Chr2:40176640-40176659 None:intergenic 30.0%
ATAAAGAAAGCTGTGTCAAA+TGG - Chr2:40177018-40177037 None:intergenic 30.0%
ATATAAGGAAGTAATGGCAA+AGG - Chr2:40178869-40178888 None:intergenic 30.0%
ATTATGAAAAGGAGCAAGAA+TGG + Chr2:40178184-40178203 MsG0280008863.01.T01:intron 30.0%
CAAATAAGAAAACAACGAAG+AGG + Chr2:40178274-40178293 MsG0280008863.01.T01:intron 30.0%
CAAATATAAGGTTACACAGA+CGG + Chr2:40178547-40178566 MsG0280008863.01.T01:intron 30.0%
CCTTAATTTAAAGACACCTA+GGG - Chr2:40180991-40181010 None:intergenic 30.0%
CTATATTGGGTAATAGGAAA+TGG - Chr2:40177840-40177859 None:intergenic 30.0%
CTTTGTTAGTTATTGTTAGG+TGG + Chr2:40179237-40179256 MsG0280008863.01.T01:intron 30.0%
GAAACCATAGTTGTAAGTAT+TGG + Chr2:40180764-40180783 MsG0280008863.01.T01:exon 30.0%
GAAAGACTTACAATTGAATG+GGG - Chr2:40177554-40177573 None:intergenic 30.0%
GAAGTAAAGCTACTTAAAGA+TGG + Chr2:40179645-40179664 MsG0280008863.01.T01:intron 30.0%
GAATCCCTATTCCTATTTAT+AGG - Chr2:40177701-40177720 None:intergenic 30.0%
GATTGGAATGAATGTGAAAA+AGG - Chr2:40176726-40176745 None:intergenic 30.0%
GCAAGGTTATTATGTTAGTT+AGG - Chr2:40176378-40176397 None:intergenic 30.0%
GCAATTAGTGAGATTAGAAT+AGG + Chr2:40179342-40179361 MsG0280008863.01.T01:intron 30.0%
GGAATGAACAAAACTAAAGA+AGG + Chr2:40179671-40179690 MsG0280008863.01.T01:intron 30.0%
GGTTGTATTAACGATTTCAT+TGG + Chr2:40180739-40180758 MsG0280008863.01.T01:exon 30.0%
GTATTCATATGGCATAATGA+AGG + Chr2:40179468-40179487 MsG0280008863.01.T01:intron 30.0%
GTTGCCTATAAATAGGAATA+GGG + Chr2:40177694-40177713 MsG0280008863.01.T01:intron 30.0%
TAAACTGATCATCCACTAAT+AGG - Chr2:40177943-40177962 None:intergenic 30.0%
TAGAGTGTATAAGCATAGAT+AGG + Chr2:40178504-40178523 MsG0280008863.01.T01:intron 30.0%
TATAAGGAAGTAATGGCAAA+GGG - Chr2:40178868-40178887 None:intergenic 30.0%
TATGGGAAGTAACAAAATGA+GGG - Chr2:40179773-40179792 None:intergenic 30.0%
TCAAGAGGATTGTTATATCA+TGG + Chr2:40180805-40180824 MsG0280008863.01.T01:exon 30.0%
TGGAATTACTTCTTCATTAC+AGG - Chr2:40180866-40180885 None:intergenic 30.0%
TGTTGCCTATAAATAGGAAT+AGG + Chr2:40177693-40177712 MsG0280008863.01.T01:intron 30.0%
TGTTGTGACTTAGATAACAA+AGG + Chr2:40179122-40179141 MsG0280008863.01.T01:intron 30.0%
TTATGGGAAGTAACAAAATG+AGG - Chr2:40179774-40179793 None:intergenic 30.0%
TTCTGTTAGACATGTAGTTA+AGG - Chr2:40179002-40179021 None:intergenic 30.0%
TTGAATTGAATGAAGAACGT+AGG - Chr2:40176331-40176350 None:intergenic 30.0%
! AACCTTTTATGAGGAAGAAA+AGG - Chr2:40176690-40176709 None:intergenic 30.0%
! AACCTTTTCTTCCTCATAAA+AGG + Chr2:40176685-40176704 MsG0280008863.01.T01:CDS 30.0%
! AATAGTTGTACCAGTGTTTT+GGG + Chr2:40177449-40177468 MsG0280008863.01.T01:intron 30.0%
! AATTTGGTGAAAGAATCATC+CGG + Chr2:40177189-40177208 MsG0280008863.01.T01:CDS 30.0%
! AGTAGCTTTACTTCAAGTAA+CGG - Chr2:40179639-40179658 None:intergenic 30.0%
! ATGTTTCAACGTTTTCTGAT+AGG + Chr2:40179496-40179515 MsG0280008863.01.T01:intron 30.0%
! ATTGAGAGAATTGGTATTGA+GGG - Chr2:40179738-40179757 None:intergenic 30.0%
! GAAACTTTGTTATAATGTCC+AGG - Chr2:40178632-40178651 None:intergenic 30.0%
! GAACCCCTATTATTATTTTC+AGG - Chr2:40179309-40179328 None:intergenic 30.0%
! GCTTTTGTAATTTTCTCCAT+TGG - Chr2:40178162-40178181 None:intergenic 30.0%
! GTGTCTATGAAATTCTCTTT+TGG + Chr2:40177623-40177642 MsG0280008863.01.T01:intron 30.0%
! TAAGAGTGTAGCACTATATT+GGG - Chr2:40177853-40177872 None:intergenic 30.0%
! TATGATGAATTTGGTATTGG+GGG + Chr2:40176441-40176460 MsG0280008863.01.T01:CDS 30.0%
! TCTAAAATGGGATATGACTT+TGG - Chr2:40180426-40180445 None:intergenic 30.0%
!! AATATACCTTTTGGGGAATA+AGG - Chr2:40176501-40176520 None:intergenic 30.0%
!! CTCTTCGTTGTTTTCTTATT+TGG - Chr2:40178276-40178295 None:intergenic 30.0%
!! GTATTCCTATGTTTTTGTTC+TGG - Chr2:40179170-40179189 None:intergenic 30.0%
!! TGTAAGTATTGGTTATTTGG+AGG + Chr2:40180775-40180794 MsG0280008863.01.T01:exon 30.0%
!! TTTTGTTTGGACATTCTCAA+AGG - Chr2:40178071-40178090 None:intergenic 30.0%
!!! AAGAGTATTGTTTTCATGGA+AGG + Chr2:40180365-40180384 MsG0280008863.01.T01:intron 30.0%
!!! AGAGTATTGTTTTCATGGAA+GGG + Chr2:40180366-40180385 MsG0280008863.01.T01:intron 30.0%
!!! CTTCAAGAGTATTGTTTTCA+TGG + Chr2:40180361-40180380 MsG0280008863.01.T01:intron 30.0%
!!! CTTTTTTTCCTTCTGTCTAT+GGG - Chr2:40176053-40176072 None:intergenic 30.0%
!!! TCTTTTTTTCCTTCTGTCTA+TGG - Chr2:40176054-40176073 None:intergenic 30.0%
!!! TTTTTTTCCTTCTGTCTATG+GGG - Chr2:40176052-40176071 None:intergenic 30.0%
AAAACCCAATCCTTTATTCC+GGG - Chr2:40180652-40180671 None:intergenic 35.0%
AAAATGAATCAGAAAGTCCG+CGG - Chr2:40177129-40177148 None:intergenic 35.0%
AAAATTGTATGGTTAGGGTG+CGG - Chr2:40176094-40176113 None:intergenic 35.0%
AAAGAAGCGATAGAGGAATA+AGG + Chr2:40179205-40179224 MsG0280008863.01.T01:intron 35.0%
AAAGCTACTTAAAGATGGAC+AGG + Chr2:40179650-40179669 MsG0280008863.01.T01:intron 35.0%
AATAGGAATAGGGATTCTGA+CGG + Chr2:40177704-40177723 MsG0280008863.01.T01:intron 35.0%
AATATGCTTCCTGAGATTTC+TGG + Chr2:40180189-40180208 MsG0280008863.01.T01:CDS 35.0%
AATCATCCGGTCTTAACTTT+GGG + Chr2:40177202-40177221 MsG0280008863.01.T01:CDS 35.0%
ACTGTTGATATTGCATGACA+AGG - Chr2:40181088-40181107 None:intergenic 35.0%
AGGAGATGAATGTAGCATTA+TGG - Chr2:40178051-40178070 None:intergenic 35.0%
AGGGAAACAGATGTATGAAA+TGG - Chr2:40179880-40179899 None:intergenic 35.0%
AGTCATTTATCCCGGAATAA+AGG + Chr2:40180639-40180658 MsG0280008863.01.T01:exon 35.0%
ATAAGAAAACAACGAAGAGG+AGG + Chr2:40178277-40178296 MsG0280008863.01.T01:intron 35.0%
ATAAGCATAGATAGGTCTTC+TGG + Chr2:40178512-40178531 MsG0280008863.01.T01:intron 35.0%
ATATGCTTCCTGAGATTTCT+GGG + Chr2:40180190-40180209 MsG0280008863.01.T01:CDS 35.0%
ATCAAGGATTTAGATGCCAT+TGG + Chr2:40178008-40178027 MsG0280008863.01.T01:intron 35.0%
ATCATCTTGCATTGTCTTTC+AGG + Chr2:40180446-40180465 MsG0280008863.01.T01:intron 35.0%
ATTCCAAAAAGAAGCGATAG+AGG + Chr2:40179198-40179217 MsG0280008863.01.T01:intron 35.0%
CAAAACACTGGTACAACTAT+TGG - Chr2:40177450-40177469 None:intergenic 35.0%
CATCTGAGAATTGAGAGAAT+TGG - Chr2:40179747-40179766 None:intergenic 35.0%
CATGCATCTGATAATATGGA+AGG - Chr2:40180490-40180509 None:intergenic 35.0%
CCAAAAGAATGCAATGTCTT+CGG - Chr2:40177976-40177995 None:intergenic 35.0%
CCCTAGGTGTCTTTAAATTA+AGG + Chr2:40180988-40181007 MsG0280008863.01.T01:exon 35.0%
CGTCTGTGTAACCTTATATT+TGG - Chr2:40178549-40178568 None:intergenic 35.0%
CTTCCATATTATCAGATGCA+TGG + Chr2:40180488-40180507 MsG0280008863.01.T01:exon 35.0%
CTTGTTGAGCAATTGTGAAA+AGG - Chr2:40176647-40176666 None:intergenic 35.0%
GAAAACCCAATCCTTTATTC+CGG - Chr2:40180653-40180672 None:intergenic 35.0%
GACTTAGATAACAAAGGCAA+AGG + Chr2:40179128-40179147 MsG0280008863.01.T01:intron 35.0%
GAGGATTGTTATATCATGGT+TGG + Chr2:40180809-40180828 MsG0280008863.01.T01:exon 35.0%
GATGTCTTTATGAGGAATGA+TGG - Chr2:40177523-40177542 None:intergenic 35.0%
GGAAAAAGAAATCTGATCAG+AGG + Chr2:40179558-40179577 MsG0280008863.01.T01:intron 35.0%
GGAAACAGATGTATGAAATG+GGG - Chr2:40179878-40179897 None:intergenic 35.0%
GGGAAACAGATGTATGAAAT+GGG - Chr2:40179879-40179898 None:intergenic 35.0%
GTAGCACTATATTGGGTAAT+AGG - Chr2:40177846-40177865 None:intergenic 35.0%
GTAGTTAAGGAACTGTAGAA+GGG - Chr2:40178989-40179008 None:intergenic 35.0%
GTGTTAGTAACACCATCAAA+TGG - Chr2:40178666-40178685 None:intergenic 35.0%
TAGTTAAGGAACTGTAGAAG+GGG - Chr2:40178988-40179007 None:intergenic 35.0%
TCAAATGGTAAACATAGACC+AGG - Chr2:40177003-40177022 None:intergenic 35.0%
TCTAAATGTTGGGTCAACTT+GGG + Chr2:40180534-40180553 MsG0280008863.01.T01:exon 35.0%
TGTAGTTAAGGAACTGTAGA+AGG - Chr2:40178990-40179009 None:intergenic 35.0%
TTATCCCGGAATAAAGGATT+GGG + Chr2:40180645-40180664 MsG0280008863.01.T01:exon 35.0%
TTTATCCCGGAATAAAGGAT+TGG + Chr2:40180644-40180663 MsG0280008863.01.T01:exon 35.0%
TTTATTAAGGATGGAGCTGT+GGG + Chr2:40178605-40178624 MsG0280008863.01.T01:intron 35.0%
TTTCCTCGCATGTGAAAATT+TGG + Chr2:40177173-40177192 MsG0280008863.01.T01:CDS 35.0%
! AAGATTGTTTTCGACGCTTA+AGG - Chr2:40178719-40178738 None:intergenic 35.0%
! AATTAGTGATGGAAACCTCA+AGG - Chr2:40177074-40177093 None:intergenic 35.0%
! AGATTGCGAAGATCATTTTG+CGG + Chr2:40178352-40178371 MsG0280008863.01.T01:intron 35.0%
! AGCGTCGAAAACAATCTTTA+AGG + Chr2:40178721-40178740 MsG0280008863.01.T01:intron 35.0%
! ATAAAGGATTGGGTTTTCAC+TGG + Chr2:40180655-40180674 MsG0280008863.01.T01:exon 35.0%
! ATAGTCTTGATATCCATTGC+CGG - Chr2:40176800-40176819 None:intergenic 35.0%
! ATTCCTCTATCGCTTCTTTT+TGG - Chr2:40179204-40179223 None:intergenic 35.0%
! ATTCTCTTTTGGCACATGAT+AGG + Chr2:40177634-40177653 MsG0280008863.01.T01:intron 35.0%
! CAATAGTTGTACCAGTGTTT+TGG + Chr2:40177448-40177467 MsG0280008863.01.T01:intron 35.0%
! CGAAAACAATCTTTAAGGAG+TGG + Chr2:40178726-40178745 MsG0280008863.01.T01:intron 35.0%
! CGAAGACATTGCATTCTTTT+GGG + Chr2:40177974-40177993 MsG0280008863.01.T01:intron 35.0%
! CTAAGAGTGTAGCACTATAT+TGG - Chr2:40177854-40177873 None:intergenic 35.0%
! GAAGACATTGCATTCTTTTG+GGG + Chr2:40177975-40177994 MsG0280008863.01.T01:intron 35.0%
! GGATTGATATTTAGAGCTTG+AGG - Chr2:40177042-40177061 None:intergenic 35.0%
! GTAACACCATCAAATGGTTT+TGG - Chr2:40178660-40178679 None:intergenic 35.0%
! GTTTAAGTTTGTTCTTACCG+CGG + Chr2:40177109-40177128 MsG0280008863.01.T01:intron 35.0%
! TAATAGGGGTTCTAATGAAG+AGG + Chr2:40179317-40179336 MsG0280008863.01.T01:intron 35.0%
! TATTGGTTATTTGGAGGACT+AGG + Chr2:40180781-40180800 MsG0280008863.01.T01:exon 35.0%
! TTGTTATATCATGGTTGGCT+AGG + Chr2:40180814-40180833 MsG0280008863.01.T01:exon 35.0%
!! TCAGATTGAAAGCATTTGTC+AGG - Chr2:40180297-40180316 None:intergenic 35.0%
AAGACTATTCCTCCAGCTAA+TGG - Chr2:40181157-40181176 None:intergenic 40.0%
AAGAGGAAGTAAAGAGGGTA+GGG - Chr2:40179899-40179918 None:intergenic 40.0%
AAGCAGACAAGACAAAACAG+AGG + Chr2:40178436-40178455 MsG0280008863.01.T01:intron 40.0%
AAGGGCTGTTGTGAATTGAA+CGG - Chr2:40176126-40176145 None:intergenic 40.0%
AAGGTTGTGCAATTTCATCG+TGG - Chr2:40178700-40178719 None:intergenic 40.0%
AAGTACAAGAAGAGAGCCAA+TGG + Chr2:40178143-40178162 MsG0280008863.01.T01:intron 40.0%
AATAGGAAATGGACCAGGAA+AGG - Chr2:40177829-40177848 None:intergenic 40.0%
AATGAGAATGGGAATGAGAG+TGG - Chr2:40176226-40176245 None:intergenic 40.0%
ACCAGGTAAAAGAGTTTGAG+CGG - Chr2:40176986-40177005 None:intergenic 40.0%
AGAGGCAGAAACAACAGAAT+GGG - Chr2:40179852-40179871 None:intergenic 40.0%
AGATGCATGGATTTCTGTTC+AGG + Chr2:40180501-40180520 MsG0280008863.01.T01:exon 40.0%
AGATGGGCCTTTATTAAGGA+TGG + Chr2:40178596-40178615 MsG0280008863.01.T01:intron 40.0%
AGGAAGATGGGCCTTTATTA+AGG + Chr2:40178592-40178611 MsG0280008863.01.T01:intron 40.0%
AGGATTTAGATGCCATTGGA+TGG + Chr2:40178012-40178031 MsG0280008863.01.T01:intron 40.0%
AGGCAGAATTTGGTAGAAAC+TGG + Chr2:40178757-40178776 MsG0280008863.01.T01:intron 40.0%
ATAGGAAATGGACCAGGAAA+GGG - Chr2:40177828-40177847 None:intergenic 40.0%
ATCATCCGGTCTTAACTTTG+GGG + Chr2:40177203-40177222 MsG0280008863.01.T01:CDS 40.0%
ATCTATGTAGCCCAAAACAC+TGG - Chr2:40177462-40177481 None:intergenic 40.0%
ATGTATGAAATGGGGAAGAG+AGG - Chr2:40179870-40179889 None:intergenic 40.0%
ATTCAAGAGACCAGGAGTAA+CGG - Chr2:40177768-40177787 None:intergenic 40.0%
CACAAGCAAATATGACAGTG+TGG + Chr2:40178247-40178266 MsG0280008863.01.T01:intron 40.0%
CACACAAGAGGAAGTAAAGA+GGG - Chr2:40179904-40179923 None:intergenic 40.0%
CACAGCTCCATCCTTAATAA+AGG - Chr2:40178606-40178625 None:intergenic 40.0%
CAGCTCCAGAACAAAAACAT+AGG + Chr2:40179162-40179181 MsG0280008863.01.T01:intron 40.0%
CATGGACTTTCTGAGTTTGA+AGG + Chr2:40177258-40177277 MsG0280008863.01.T01:CDS 40.0%
CGGTTTAGTTAGGAGAAACA+AGG + Chr2:40177668-40177687 MsG0280008863.01.T01:intron 40.0%
CTACACTCTTAGAGCTATGA+GGG + Chr2:40177862-40177881 MsG0280008863.01.T01:intron 40.0%
CTTCAAACTCAGAAAGTCCA+TGG - Chr2:40177260-40177279 None:intergenic 40.0%
CTTCATCCTTATTCCCCAAA+AGG + Chr2:40176492-40176511 MsG0280008863.01.T01:CDS 40.0%
CTTTACCTCGTATAATCAGG+CGG - Chr2:40180261-40180280 None:intergenic 40.0%
CTTTATTAAGGATGGAGCTG+TGG + Chr2:40178604-40178623 MsG0280008863.01.T01:intron 40.0%
GAAAATGGGCCATCTGAAAA+GGG - Chr2:40179954-40179973 None:intergenic 40.0%
GAATCATCCGGTCTTAACTT+TGG + Chr2:40177201-40177220 MsG0280008863.01.T01:CDS 40.0%
GAGAAACAATGTCACACAAG+AGG - Chr2:40179916-40179935 None:intergenic 40.0%
GAGGCAGAATCAGAAATTGA+TGG + Chr2:40178296-40178315 MsG0280008863.01.T01:intron 40.0%
GATAGGACTCGAACAAGTAA+GGG + Chr2:40179513-40179532 MsG0280008863.01.T01:intron 40.0%
GATGCAGTCATTATATGCCT+TGG + Chr2:40180156-40180175 MsG0280008863.01.T01:CDS 40.0%
GATGCATGGATTTCTGTTCA+GGG + Chr2:40180502-40180521 MsG0280008863.01.T01:exon 40.0%
GGATAAATGACTGATGCCTT+CGG - Chr2:40180631-40180650 None:intergenic 40.0%
GGCAATGGATATCAAGACTA+TGG + Chr2:40176799-40176818 MsG0280008863.01.T01:CDS 40.0%
GGGCCAAAATTGTATGGTTA+GGG - Chr2:40176099-40176118 None:intergenic 40.0%
GTCTAAATGTTGGGTCAACT+TGG + Chr2:40180533-40180552 MsG0280008863.01.T01:exon 40.0%
GTTGCATCCGCTCAATTTAA+AGG - Chr2:40177363-40177382 None:intergenic 40.0%
TAAGGTTACACAGACGGAAA+AGG + Chr2:40178553-40178572 MsG0280008863.01.T01:intron 40.0%
TACACTCTTAGAGCTATGAG+GGG + Chr2:40177863-40177882 MsG0280008863.01.T01:intron 40.0%
TCACACAAGAGGAAGTAAAG+AGG - Chr2:40179905-40179924 None:intergenic 40.0%
TCATGTAGTTAAGCCTCTCT+GGG + Chr2:40176590-40176609 MsG0280008863.01.T01:intron 40.0%
TCGTTAATACAACCCAGAAG+TGG - Chr2:40180733-40180752 None:intergenic 40.0%
TGAAAATGGGCCATCTGAAA+AGG - Chr2:40179955-40179974 None:intergenic 40.0%
TGACAAGAGAAACCAATAGC+AGG + Chr2:40178412-40178431 MsG0280008863.01.T01:intron 40.0%
TGATAGGACTCGAACAAGTA+AGG + Chr2:40179512-40179531 MsG0280008863.01.T01:intron 40.0%
TTCCAAGTAGTCAACTCAGA+TGG - Chr2:40180886-40180905 None:intergenic 40.0%
TTGAAGAAACCATTAGCTGG+AGG + Chr2:40181145-40181164 MsG0280008863.01.T01:exon 40.0%
TTGACCCAACATTTAGACTG+CGG - Chr2:40180531-40180550 None:intergenic 40.0%
TTTCTCCCCAAAGTTAAGAC+CGG - Chr2:40177211-40177230 None:intergenic 40.0%
! AAGGCATCAGTCATTTATCC+CGG + Chr2:40180631-40180650 MsG0280008863.01.T01:exon 40.0%
! AGATCATTTTGCGGGAAACT+AGG + Chr2:40178361-40178380 MsG0280008863.01.T01:intron 40.0%
! CAACGATGCCAAGATTTGTT+AGG + Chr2:40177909-40177928 MsG0280008863.01.T01:intron 40.0%
! CAGTGTTGAGCAACTAAGAT+TGG - Chr2:40176743-40176762 None:intergenic 40.0%
! CCGAAGACATTGCATTCTTT+TGG + Chr2:40177973-40177992 MsG0280008863.01.T01:intron 40.0%
! CGGATGCAACAATTTGAAGT+TGG + Chr2:40177373-40177392 MsG0280008863.01.T01:intron 40.0%
! CTCAGGAAGCATATTCACTT+TGG - Chr2:40180184-40180203 None:intergenic 40.0%
! GAGGGGATTTAGAGTGAAAA+TGG + Chr2:40177880-40177899 MsG0280008863.01.T01:intron 40.0%
! GATCATTTTGCGGGAAACTA+GGG + Chr2:40178362-40178381 MsG0280008863.01.T01:intron 40.0%
! GATTGCGAAGATCATTTTGC+GGG + Chr2:40178353-40178372 MsG0280008863.01.T01:intron 40.0%
! GCACCCTAACCATACAATTT+TGG + Chr2:40176093-40176112 MsG0280008863.01.T01:CDS 40.0%
! TCACCAAATTTTCACATGCG+AGG - Chr2:40177179-40177198 None:intergenic 40.0%
! TTCCATCTGAGTTGACTACT+TGG + Chr2:40180881-40180900 MsG0280008863.01.T01:exon 40.0%
!! TGATGGTGTTACTAACACAG+TGG + Chr2:40178668-40178687 MsG0280008863.01.T01:intron 40.0%
!! TGATTAGCTTCTCCATCCAA+TGG - Chr2:40178027-40178046 None:intergenic 40.0%
!!! ACACCATCAAATGGTTTTGG+TGG - Chr2:40178657-40178676 None:intergenic 40.0%
AACAAGTTACCGTACCTGAG+AGG - Chr2:40176172-40176191 None:intergenic 45.0%
AAGGAAGTAATGGCAAAGGG+AGG - Chr2:40178865-40178884 None:intergenic 45.0%
AAGGATGATACCAGCAGCAA+AGG + Chr2:40178572-40178591 MsG0280008863.01.T01:intron 45.0%
AAGTGCGGCGATTTAGTTGA+TGG - Chr2:40179035-40179054 None:intergenic 45.0%
AAGTGGACAAGGGGTGAAAA+TGG - Chr2:40179969-40179988 None:intergenic 45.0%
AATATGGAAGGTCCATGCTC+AGG - Chr2:40180478-40180497 None:intergenic 45.0%
ACACCTCTGCATGTTCTCAA+AGG - Chr2:40180222-40180241 None:intergenic 45.0%
AGCATAGATAGGTCTTCTGG+CGG + Chr2:40178515-40178534 MsG0280008863.01.T01:intron 45.0%
AGGAAGTAATGGCAAAGGGA+GGG - Chr2:40178864-40178883 None:intergenic 45.0%
AGGCAGAAACAACAGAATGG+GGG - Chr2:40179850-40179869 None:intergenic 45.0%
AGTGGACAAGGGGTGAAAAT+GGG - Chr2:40179968-40179987 None:intergenic 45.0%
AGTGTTTGTACTCTGCAGCA+AGG - Chr2:40176952-40176971 None:intergenic 45.0%
ATACCAGCAGCAAAGGAAGA+TGG + Chr2:40178579-40178598 MsG0280008863.01.T01:intron 45.0%
ATACCTACCCCATAGACAGA+AGG + Chr2:40176042-40176061 MsG0280008863.01.T01:exon 45.0%
ATCAACTAAATCGCCGCACT+TGG + Chr2:40179034-40179053 MsG0280008863.01.T01:intron 45.0%
ATGGTTCACATCGAGAGTCT+TGG + Chr2:40178809-40178828 MsG0280008863.01.T01:intron 45.0%
ATTCCCATTCTCATTGCTCC+AGG + Chr2:40176231-40176250 MsG0280008863.01.T01:intron 45.0%
CAAGAGGAAGTAAAGAGGGT+AGG - Chr2:40179900-40179919 None:intergenic 45.0%
CCTCCACCAAAACCATTTGA+TGG + Chr2:40178651-40178670 MsG0280008863.01.T01:intron 45.0%
CCTGGTCTCTTGAATATCCA+GGG + Chr2:40177773-40177792 MsG0280008863.01.T01:intron 45.0%
CGTTGCCACCTAACAAATCT+TGG - Chr2:40177920-40177939 None:intergenic 45.0%
CTAGGGAAGGATTGAGATAG+TGG + Chr2:40178379-40178398 MsG0280008863.01.T01:intron 45.0%
CTCATGTAGTTAAGCCTCTC+TGG + Chr2:40176589-40176608 MsG0280008863.01.T01:intron 45.0%
CTGATGTTCACCTCACTTCA+GGG + Chr2:40176763-40176782 MsG0280008863.01.T01:intron 45.0%
CTTGAGCAAATGCCAAACGA+CGG - Chr2:40176291-40176310 None:intergenic 45.0%
GAACCTGGAGCAATGAGAAT+GGG - Chr2:40176237-40176256 None:intergenic 45.0%
GAGAGGCAGAAACAACAGAA+TGG - Chr2:40179853-40179872 None:intergenic 45.0%
GAGGCAGAAACAACAGAATG+GGG - Chr2:40179851-40179870 None:intergenic 45.0%
GCAGAGTTAGAGAAGGAGAA+GGG - Chr2:40176144-40176163 None:intergenic 45.0%
GCATATTCACTTTGGCACCA+AGG - Chr2:40180176-40180195 None:intergenic 45.0%
GCTACACTCTTAGAGCTATG+AGG + Chr2:40177861-40177880 MsG0280008863.01.T01:intron 45.0%
GGATGTTGCAGAGTTAGAGA+AGG - Chr2:40176151-40176170 None:intergenic 45.0%
GGGGCCAAAATTGTATGGTT+AGG - Chr2:40176100-40176119 None:intergenic 45.0%
TAACTCTGCAACATCCTCTC+AGG + Chr2:40176155-40176174 MsG0280008863.01.T01:CDS 45.0%
TACCAGCAGCAAAGGAAGAT+GGG + Chr2:40178580-40178599 MsG0280008863.01.T01:intron 45.0%
TAGGACTTTGCTGCAATGCA+AGG - Chr2:40176395-40176414 None:intergenic 45.0%
TCAACTAAATCGCCGCACTT+GGG + Chr2:40179035-40179054 MsG0280008863.01.T01:intron 45.0%
TCCTGGTCTCTTGAATATCC+AGG + Chr2:40177772-40177791 MsG0280008863.01.T01:intron 45.0%
TGACCCAACATTTAGACTGC+GGG - Chr2:40180530-40180549 None:intergenic 45.0%
TGAGTGAGATACCTCTGTAG+CGG + Chr2:40179581-40179600 MsG0280008863.01.T01:intron 45.0%
TGATGTTCACCTCACTTCAG+GGG + Chr2:40176764-40176783 MsG0280008863.01.T01:intron 45.0%
TGCAGAGTTAGAGAAGGAGA+AGG - Chr2:40176145-40176164 None:intergenic 45.0%
TGCATTGCAGCAAAGTCCTA+AGG + Chr2:40176395-40176414 MsG0280008863.01.T01:intron 45.0%
TGGGTAATAGGAAATGGACC+AGG - Chr2:40177834-40177853 None:intergenic 45.0%
TGGTTCACATCGAGAGTCTT+GGG + Chr2:40178810-40178829 MsG0280008863.01.T01:intron 45.0%
TGTTTCTCACATGCACTGTC+AGG + Chr2:40179928-40179947 MsG0280008863.01.T01:intron 45.0%
TTCAAGAGACCAGGAGTAAC+GGG - Chr2:40177767-40177786 None:intergenic 45.0%
TTGGGGAAGAGTGGTTATCA+AGG + Chr2:40177992-40178011 MsG0280008863.01.T01:intron 45.0%
TTTAAGGAGTGGTATCGCTC+AGG + Chr2:40178737-40178756 MsG0280008863.01.T01:intron 45.0%
TTTCCTTCTGTCTATGGGGT+AGG - Chr2:40176048-40176067 None:intergenic 45.0%
TTTGGAGGACTAGGTTCAAG+AGG + Chr2:40180790-40180809 MsG0280008863.01.T01:exon 45.0%
! ATTTTGCGGGAAACTAGGGA+AGG + Chr2:40178366-40178385 MsG0280008863.01.T01:intron 45.0%
! CAGAGGTGTAATTGTTCACC+TGG + Chr2:40180233-40180252 MsG0280008863.01.T01:CDS 45.0%
! CGGTGGTGATGCCAAATATA+AGG + Chr2:40178535-40178554 MsG0280008863.01.T01:intron 45.0%
! CTTCCTTTGAGAACATGCAG+AGG + Chr2:40180216-40180235 MsG0280008863.01.T01:CDS 45.0%
! GACGGAGAGCACAAAATTAG+TGG + Chr2:40177722-40177741 MsG0280008863.01.T01:intron 45.0%
! GATGAATTTGGTATTGGGGG+CGG + Chr2:40176444-40176463 MsG0280008863.01.T01:CDS 45.0%
! GGTTGTATTTTCCGCTACAG+AGG - Chr2:40179595-40179614 None:intergenic 45.0%
! GTTTTCACTGGAGCAAAAGC+TGG + Chr2:40180667-40180686 MsG0280008863.01.T01:exon 45.0%
! TAGGGGTTCTAATGAAGAGG+TGG + Chr2:40179320-40179339 MsG0280008863.01.T01:intron 45.0%
! TGGTTGGCTAGGTAGTTTGA+TGG + Chr2:40180825-40180844 MsG0280008863.01.T01:exon 45.0%
! TTCAGGTGTTATCCTGAGCA+TGG + Chr2:40180463-40180482 MsG0280008863.01.T01:intron 45.0%
!! AGCTGGAGGAATAGTCTTGT+TGG + Chr2:40181159-40181178 MsG0280008863.01.T01:exon 45.0%
!! CGATGCCAAGATTTGTTAGG+TGG + Chr2:40177912-40177931 MsG0280008863.01.T01:intron 45.0%
!! GCTGGAGGAATAGTCTTGTT+GGG + Chr2:40181160-40181179 MsG0280008863.01.T01:exon 45.0%
!! TGCATTCTTTTGGGGAAGAG+TGG + Chr2:40177983-40178002 MsG0280008863.01.T01:intron 45.0%
!! TGGAGCAAAAGCTGGTTTGA+GGG + Chr2:40180675-40180694 MsG0280008863.01.T01:exon 45.0%
!!! CCATCAAATGGTTTTGGTGG+AGG - Chr2:40178654-40178673 None:intergenic 45.0%
!!! TCCACTCCCTTTTTTCCATG+TGG + Chr2:40179824-40179843 MsG0280008863.01.T01:intron 45.0%
AAGGAGACAGTCGGCATTAG+TGG + Chr2:40179092-40179111 MsG0280008863.01.T01:intron 50.0%
ACATGGATCGCTTCCACTTC+TGG + Chr2:40180717-40180736 MsG0280008863.01.T01:exon 50.0%
AGAAGTGGAAGCGATCCATG+TGG - Chr2:40180718-40180737 None:intergenic 50.0%
AGGAGACAGTCGGCATTAGT+GGG + Chr2:40179093-40179112 MsG0280008863.01.T01:intron 50.0%
AGGAGAGGAACAAGTGGACA+AGG - Chr2:40179980-40179999 None:intergenic 50.0%
ATAGATAGGTCTTCTGGCGG+TGG + Chr2:40178518-40178537 MsG0280008863.01.T01:intron 50.0%
ATGGGGGCCACATGGAAAAA+AGG - Chr2:40179834-40179853 None:intergenic 50.0%
ATGTTGGGTCAACTTGGGAG+TGG + Chr2:40180539-40180558 MsG0280008863.01.T01:exon 50.0%
ATTGTATGGTTAGGGTGCGG+AGG - Chr2:40176091-40176110 None:intergenic 50.0%
CAATCCTCGACACTACCTTG+AGG + Chr2:40177056-40177075 MsG0280008863.01.T01:CDS 50.0%
CATGGATCGCTTCCACTTCT+GGG + Chr2:40180718-40180737 MsG0280008863.01.T01:exon 50.0%
CCCTGGATATTCAAGAGACC+AGG - Chr2:40177776-40177795 None:intergenic 50.0%
CGAACCTGGAGCAATGAGAA+TGG - Chr2:40176238-40176257 None:intergenic 50.0%
CGTCGTTTGGCATTTGCTCA+AGG + Chr2:40176289-40176308 MsG0280008863.01.T01:CDS 50.0%
CTGCAACATCCTCTCAGGTA+CGG + Chr2:40176160-40176179 MsG0280008863.01.T01:intron 50.0%
CTGTTGTGAATTGAACGGCG+GGG - Chr2:40176121-40176140 None:intergenic 50.0%
CTTGTCTGCTTGCCTGCTAT+TGG - Chr2:40178427-40178446 None:intergenic 50.0%
GAAACCTCAAGGTAGTGTCG+AGG - Chr2:40177063-40177082 None:intergenic 50.0%
GAGAGGAACAAGTGGACAAG+GGG - Chr2:40179978-40179997 None:intergenic 50.0%
GCAGCAAGGAAGAGAAGTCT+TGG - Chr2:40176938-40176957 None:intergenic 50.0%
GCATCTAGCAAGGAGACAGT+CGG + Chr2:40179083-40179102 MsG0280008863.01.T01:intron 50.0%
GCCACATGGAAAAAAGGGAG+TGG - Chr2:40179828-40179847 None:intergenic 50.0%
GCTCCCGCAGTCTAAATGTT+GGG + Chr2:40180524-40180543 MsG0280008863.01.T01:exon 50.0%
GCTGATGTTCACCTCACTTC+AGG + Chr2:40176762-40176781 MsG0280008863.01.T01:intron 50.0%
GCTGTTGTGAATTGAACGGC+GGG - Chr2:40176122-40176141 None:intergenic 50.0%
GGAATCCTGTACTGAGAGAG+TGG + Chr2:40179692-40179711 MsG0280008863.01.T01:intron 50.0%
GGAGAGGAACAAGTGGACAA+GGG - Chr2:40179979-40179998 None:intergenic 50.0%
GGCTGTTGTGAATTGAACGG+CGG - Chr2:40176123-40176142 None:intergenic 50.0%
GGTATCGCTCAGGCAGAATT+TGG + Chr2:40178747-40178766 MsG0280008863.01.T01:intron 50.0%
GTATTGAGGGAAAGCTGAGC+AGG - Chr2:40179725-40179744 None:intergenic 50.0%
TAGGTGGCAACGCCTATTAG+TGG + Chr2:40177928-40177947 MsG0280008863.01.T01:intron 50.0%
TCGTATAATCAGGCGGTTCC+AGG - Chr2:40180254-40180273 None:intergenic 50.0%
TCTTCATCAGCTACTGCCGA+AGG + Chr2:40180612-40180631 MsG0280008863.01.T01:exon 50.0%
TGGAACCGCCTGATTATACG+AGG + Chr2:40180253-40180272 MsG0280008863.01.T01:CDS 50.0%
TGGGGGCCACATGGAAAAAA+GGG - Chr2:40179833-40179852 None:intergenic 50.0%
TGTAGTTAAGCCTCTCTGGG+AGG + Chr2:40176593-40176612 MsG0280008863.01.T01:intron 50.0%
TGTTGTGAATTGAACGGCGG+GGG - Chr2:40176120-40176139 None:intergenic 50.0%
! ACTGTCAGGCCCTTTTCAGA+TGG + Chr2:40179942-40179961 MsG0280008863.01.T01:intron 50.0%
! GCCGCTCAAACTCTTTTACC+TGG + Chr2:40176982-40177001 MsG0280008863.01.T01:CDS 50.0%
! GTAGTTAAGCCTCTCTGGGA+GGG + Chr2:40176594-40176613 MsG0280008863.01.T01:intron 50.0%
! TGCTTCCTGAGATTTCTGGG+AGG + Chr2:40180193-40180212 MsG0280008863.01.T01:CDS 50.0%
!! CTGGAGCAAAAGCTGGTTTG+AGG + Chr2:40180674-40180693 MsG0280008863.01.T01:exon 50.0%
!! GGCATTGGTAGCATCTAGCA+AGG + Chr2:40179073-40179092 MsG0280008863.01.T01:intron 50.0%
!! GGTGCTTCTGGAATTTCTGG+AGG + Chr2:40176465-40176484 MsG0280008863.01.T01:CDS 50.0%
ACAACAGAATGGGGGCCACA+TGG - Chr2:40179842-40179861 None:intergenic 55.0%
ACTTGGGCTTGTGTGTGGAG+AGG + Chr2:40179051-40179070 MsG0280008863.01.T01:intron 55.0%
ACTTGTCGTCTCTGGTCGAG+CGG + Chr2:40176005-40176024 MsG0280008863.01.T01:exon 55.0%
CGTAAGATGCCCCTGAAGTG+AGG - Chr2:40176776-40176795 None:intergenic 55.0%
CTTGGGCTTGTGTGTGGAGA+GGG + Chr2:40179052-40179071 MsG0280008863.01.T01:intron 55.0%
GGAAGCCTCCCAGAAATCTC+AGG - Chr2:40180201-40180220 None:intergenic 55.0%
GGAGACAGTCGGCATTAGTG+GGG + Chr2:40179094-40179113 MsG0280008863.01.T01:intron 55.0%
GGCTACCACTCTCTCAGTAC+AGG - Chr2:40179700-40179719 None:intergenic 55.0%
GGCTCCCGCAGTCTAAATGT+TGG + Chr2:40180523-40180542 MsG0280008863.01.T01:exon 55.0%
GTTGTGAATTGAACGGCGGG+GGG - Chr2:40176119-40176138 None:intergenic 55.0%
TCCACACACAAGCCCAAGTG+CGG - Chr2:40179050-40179069 None:intergenic 55.0%
TCGCTGGACTTTCCGTCGTT+TGG + Chr2:40176276-40176295 MsG0280008863.01.T01:CDS 55.0%
TGAGGGAAAGCTGAGCAGGA+AGG - Chr2:40179721-40179740 None:intergenic 55.0%
! CTTGTGTGTGGAGAGGGCAT+TGG + Chr2:40179058-40179077 MsG0280008863.01.T01:intron 55.0%
!! CTTCAGGGGCATCTTACGAC+CGG + Chr2:40176778-40176797 MsG0280008863.01.T01:intron 55.0%
!! GGCGGTGCTTCTGGAATTTC+TGG + Chr2:40176462-40176481 MsG0280008863.01.T01:CDS 55.0%
AAGGATGGAGCTGTGGGTCC+TGG + Chr2:40178611-40178630 MsG0280008863.01.T01:intron 60.0%
AGCGATCCATGTGGCGTGAG+TGG - Chr2:40180709-40180728 None:intergenic 60.0%
ATGCCTCCACTCACGCCACA+TGG + Chr2:40180700-40180719 MsG0280008863.01.T01:exon 60.0%
GATCCATGTGGCGTGAGTGG+AGG - Chr2:40180706-40180725 None:intergenic 60.0%
GGCCCATCTTCCTTTGCTGC+TGG - Chr2:40178585-40178604 None:intergenic 60.0%
GGCGGGGGGCCAAAATTGTA+TGG - Chr2:40176105-40176124 None:intergenic 60.0%
GGGCATCTTACGACCGGCAA+TGG + Chr2:40176784-40176803 MsG0280008863.01.T01:CDS 60.0%
TGCTCCAGGTTCGCTGTCCT+TGG + Chr2:40176245-40176264 MsG0280008863.01.T01:intron 60.0%
!! CTGGGAGGGTGCTCAGTGTT+GGG + Chr2:40176608-40176627 MsG0280008863.01.T01:CDS 60.0%
!! TCTGGGAGGGTGCTCAGTGT+TGG + Chr2:40176607-40176626 MsG0280008863.01.T01:CDS 60.0%
!! TGGGAGTGTCCCGTTACTCC+TGG + Chr2:40177755-40177774 MsG0280008863.01.T01:intron 60.0%
AGCGCCAAGGACAGCGAACC+TGG - Chr2:40176252-40176271 None:intergenic 65.0%
AGGTTCGCTGTCCTTGGCGC+TGG + Chr2:40176251-40176270 MsG0280008863.01.T01:intron 65.0%
CACTGAGCACCCTCCCAGAG+AGG - Chr2:40176606-40176625 None:intergenic 65.0%
GCCGCACTTGGGCTTGTGTG+TGG + Chr2:40179046-40179065 MsG0280008863.01.T01:intron 65.0%
GTCCAGCGAAACCAGCGCCA+AGG - Chr2:40176265-40176284 None:intergenic 65.0%
! GGTATTGGGGGCGGTGCTTC+TGG + Chr2:40176453-40176472 MsG0280008863.01.T01:CDS 65.0%
!! GTCCTTGGCGCTGGTTTCGC+TGG + Chr2:40176260-40176279 MsG0280008863.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 40176004 40181203 40176004 ID=MsG0280008863.01;
Chr2 mRNA 40176004 40181203 40176004 ID=MsG0280008863.01.T01;Parent=MsG0280008863.01
Chr2 exon 40176004 40176176 40176004 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40176076 40176176 40176076 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 CDS 40176253 40176310 40176253 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40176253 40176310 40176253 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40176405 40176513 40176405 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40176405 40176513 40176405 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40176598 40176706 40176598 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40176598 40176706 40176598 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40176784 40176835 40176784 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40176784 40176835 40176784 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40176931 40177077 40176931 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40176931 40177077 40176931 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40177168 40177279 40177168 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40177168 40177279 40177168 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40180148 40180274 40180148 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40180148 40180274 40180148 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Chr2 CDS 40180468 40180927 40180468 ID=MsG0280008863.01.T01.cds;Parent=MsG0280008863.01.T01
Chr2 exon 40180468 40181203 40180468 ID=MsG0280008863.01.T01.exon;Parent=MsG0280008863.01.T01
Gene Sequence

>MsG0280008863.01.T01

ATGAAGATATGTCCTCCGCACCCTAACCATACAATTTTGGCCCCCCGCCGTTCAATTCACAACAGCCCTTCTCCTTCTCTAACTCTGCAACATCCTCTCAGGTTCGCTGTCCTTGGCGCTGGTTTCGCTGGACTTTCCGTCGTTTGGCATTTGCTCAAGCAAAGTCCTAAGGAGTTGAACTTAAATATTCATTTATATGATGAATTTGGTATTGGGGGCGGTGCTTCTGGAATTTCTGGAGGTCTTCTTCATCCTTATTCCCCAAAAGTTAAGCCTCTCTGGGAGGGTGCTCAGTGTTGGGAAGAGACCATAAACCTTTTCACAATTGCTCAACAAGCTACTCAACATCACATCAAACCTTTTCTTCCTCATAAAAGGGGCATCTTACGACCGGCAATGGATATCAAGACTATGGCCAAATTGAATGATAATGCCAAGACTTCTCTTCCTTGCTGCAGAGTACAAACACTTAACAATCAAGCCGCTCAAACTCTTTTACCTGGTCTATGTTTACCATTTGACACAGCTTTCTTTATGCCTCAAGCTCTAAATATCAATCCTCGACACTACCTTGAGGCACTTTTCCTCGCATGTGAAAATTTGGTGAAAGAATCATCCGGTCTTAACTTTGGGGAGAAACAGCTTAGTTTACACAAAAAATCTATCCATGGACTTTCTGAGTTTGAAGGTGAATATGATGCAGTCATTATATGCCTTGGTGCCAAAGTGAATATGCTTCCTGAGATTTCTGGGAGGCTTCCTTTGAGAACATGCAGAGGTGTAATTGTTCACCTGGAACCGCCTGATTATACGAGGTGTTATCCTGAGCATGGACCTTCCATATTATCAGATGCATGGATTTCTGTTCAGGGCTCCCGCAGTCTAAATGTTGGGTCAACTTGGGAGTGGAAATCTATAAATTCGTCGTCAAATGTTTCTACTGATGAAGCTTCAAAAGCTCTTCATCAGCTACTGCCGAAGGCATCAGTCATTTATCCCGGAATAAAGGATTGGGTTTTCACTGGAGCAAAAGCTGGTTTGAGGGCAATGCCTCCACTCACGCCACATGGATCGCTTCCACTTCTGGGTTGTATTAACGATTTCATTGGCAGAAACCATAGTTGTAAGTATTGGTTATTTGGAGGACTAGGTTCAAGAGGATTGTTATATCATGGTTGGCTAGGTAGTTTGATGGCACATGCTGTACTTTCCTGTAATGAAGAAGTAATTCCATCTGAGTTGACTACTTGGAAAAACATTAAATCCAAACTTTAG

Protein sequence

>MsG0280008863.01.T01

MKICPPHPNHTILAPRRSIHNSPSPSLTLQHPLRFAVLGAGFAGLSVVWHLLKQSPKELNLNIHLYDEFGIGGGASGISGGLLHPYSPKVKPLWEGAQCWEETINLFTIAQQATQHHIKPFLPHKRGILRPAMDIKTMAKLNDNAKTSLPCCRVQTLNNQAAQTLLPGLCLPFDTAFFMPQALNINPRHYLEALFLACENLVKESSGLNFGEKQLSLHKKSIHGLSEFEGEYDAVIICLGAKVNMLPEISGRLPLRTCRGVIVHLEPPDYTRCYPEHGPSILSDAWISVQGSRSLNVGSTWEWKSINSSSNVSTDEASKALHQLLPKASVIYPGIKDWVFTGAKAGLRAMPPLTPHGSLPLLGCINDFIGRNHSCKYWLFGGLGSRGLLYHGWLGSLMAHAVLSCNEEVIPSELTTWKNIKSKL*