AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014539.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014539.01.T01 MTR_3g058990 87.481 663 76 4 1 661 1 658 0.0 849
MsG0380014539.01.T01 MTR_3g059000 63.497 715 200 13 1 661 1 708 0.0 583
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014539.01.T01 AT5G55670 48.660 746 262 22 1 661 1 710 1.27e-159 476
MsG0380014539.01.T01 AT5G55670 44.138 435 149 13 1 369 1 407 9.70e-74 248
MsG0380014539.01.T01 AT5G55670 56.614 189 66 4 482 661 404 585 1.46e-42 162
MsG0380014539.01.T01 AT1G13190 41.149 435 162 19 184 588 200 570 5.69e-62 216

Find 277 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGGTGCAGGTGGGGTTTC+TGG -0.064139 3:-56225072 MsG0380014539.01.T01:CDS
TCCTTATACTGTTAAGAAAA+TGG 0.192681 3:-56224542 MsG0380014539.01.T01:CDS
GTTGGGTTGCAGGGGATTAT+TGG 0.203190 3:-56224928 MsG0380014539.01.T01:CDS
CCGCCCCATCCACCCATATT+TGG 0.219830 3:+56223923 None:intergenic
GTGTTCAAGGAGGTGGGATT+AGG 0.221569 3:-56225014 MsG0380014539.01.T01:CDS
AGGTATGGATGGTCCTAATA+TGG 0.242127 3:-56223960 MsG0380014539.01.T01:CDS
TGATACTGGTGTTGGGTTGC+AGG 0.246610 3:-56224938 MsG0380014539.01.T01:CDS
CACGATTCCTTCTTTCTTCA+AGG 0.264146 3:+56223669 None:intergenic
GGTGGGATTAGGGTTGAATT+AGG 0.265479 3:-56225003 MsG0380014539.01.T01:CDS
ATGAATGGTCATTTATTTAA+TGG 0.265989 3:-56224592 MsG0380014539.01.T01:CDS
CCCTGGTTCGGCACGGCAGT+TGG 0.280516 3:+56224484 None:intergenic
TGGGAGAGGCTTTGAATAAT+AGG 0.286858 3:-56224522 MsG0380014539.01.T01:CDS
AGGGTGCAGGTGGGGTTTCT+GGG 0.294476 3:-56225071 MsG0380014539.01.T01:CDS
TTTCAGAATCAAGAGCTTAT+AGG 0.295951 3:-56225048 MsG0380014539.01.T01:CDS
GAGGTAGTGGAAGAGGTAAT+TGG 0.305315 3:-56224330 MsG0380014539.01.T01:CDS
CTTGAGTGGGATTGGGGAAC+AGG 0.305403 3:-56224965 MsG0380014539.01.T01:CDS
GGGTGTTGGTGGAGGAAGTG+GGG 0.308226 3:-56224821 MsG0380014539.01.T01:CDS
GGGGTGTTGGTGGAGGAAGT+GGG 0.308650 3:-56224822 MsG0380014539.01.T01:CDS
GAAGCTGAGCTTTGTAAGTA+TGG 0.309921 3:-56224724 MsG0380014539.01.T01:CDS
GTGGACTACTGATGCTGATT+TGG 0.311171 3:-56224746 MsG0380014539.01.T01:CDS
TGTTCAAGGAGGTGGGATTA+GGG 0.312237 3:-56225013 MsG0380014539.01.T01:CDS
TTGGGTTGCAGGGGATTATT+GGG 0.324035 3:-56224927 MsG0380014539.01.T01:CDS
TCTAGAAAAGAATCTGATTA+TGG 0.324934 3:-56223395 MsG0380014539.01.T01:CDS
TCCGGCCACATTCCCATATT+AGG 0.337509 3:+56223947 None:intergenic
GGGGAACAGGGTGGTGATAC+TGG 0.338010 3:-56224952 MsG0380014539.01.T01:CDS
TTCAGAATCAAGAGCTTATA+GGG 0.343645 3:-56225047 MsG0380014539.01.T01:CDS
AGGAGAGGACCTGCTGAGGC+TGG 0.347954 3:-56224460 MsG0380014539.01.T01:CDS
ATGGTAATCCGATGAGGAAT+AGG 0.351126 3:-56224270 MsG0380014539.01.T01:CDS
GGGAGAGGGGACGATCTTCT+AGG 0.353899 3:-56223463 MsG0380014539.01.T01:CDS
GGTAATGCTGGAAATGGATA+TGG 0.354522 3:-56224217 MsG0380014539.01.T01:CDS
CTGCTACCTTGAGTGGGATT+GGG 0.355320 3:-56224972 MsG0380014539.01.T01:CDS
AGGTAGTGGAAGAGGTAATT+GGG 0.355953 3:-56224329 MsG0380014539.01.T01:CDS
GGGATGCATATGAATGGTAT+AGG 0.358177 3:-56223998 MsG0380014539.01.T01:CDS
AATGTGGCCGGATCCAAATA+TGG 0.361260 3:-56223936 MsG0380014539.01.T01:CDS
TTCGTAATCTTCATCTTCTT+CGG 0.361435 3:+56225248 None:intergenic
CCTGGTTCGGCACGGCAGTT+GGG 0.372146 3:+56224485 None:intergenic
CAACCACCAGTTGGGGTTGG+TGG 0.373191 3:-56224895 MsG0380014539.01.T01:CDS
TTTAGCTACAACTGCTTGTA+AGG 0.377088 3:-56224620 MsG0380014539.01.T01:CDS
GGTGTTGGTGGAGGAAGTGG+GGG 0.380601 3:-56224820 MsG0380014539.01.T01:CDS
GGTGGCGGTGGTGGCGGCAG+TGG 0.382153 3:+56225105 None:intergenic
CGTCGCCGACGATGGTTTCA+TGG 0.388823 3:-56225271 MsG0380014539.01.T01:CDS
AGTGGCAACGGCGGTGGTGG+CGG 0.391147 3:+56225123 None:intergenic
GGCAGTGGCAACGGCGGTGG+TGG 0.394554 3:+56225120 None:intergenic
TTAGGCCAACCAGCTCTATC+AGG 0.396683 3:+56223818 None:intergenic
GTGGGATTAGGGTTGAATTA+GGG 0.399065 3:-56225002 MsG0380014539.01.T01:CDS
GGCCCAACGCCTCCGTTCTC+TGG 0.402471 3:-56224094 MsG0380014539.01.T01:CDS
CCCTGAGCTGTCAGCGGTGG+CGG 0.402790 3:+56225090 None:intergenic
GATACTGGTGTTGGGTTGCA+GGG 0.404033 3:-56224937 MsG0380014539.01.T01:CDS
AACAGCAGCAACCACCAGTT+GGG 0.404217 3:-56224903 MsG0380014539.01.T01:CDS
TGGTAATCCGATGAGGAATA+GGG 0.404831 3:-56224269 MsG0380014539.01.T01:CDS
TCAAAACCCGGATGCATCAT+AGG 0.407846 3:+56224172 None:intergenic
CCCTTTCGCGGTCACGATCA+TGG 0.410056 3:+56223588 None:intergenic
GGAGGGGTTAAGCCGGGTGG+TGG 0.410967 3:-56224439 MsG0380014539.01.T01:CDS
CCTTCATTTGGTGGTCCCAT+TGG 0.412566 3:-56224148 MsG0380014539.01.T01:CDS
TTGTGGGTGATTTGCATTGG+TGG 0.413664 3:-56224765 MsG0380014539.01.T01:CDS
GGGAATGAAGTGGGTGTTCA+AGG 0.414130 3:-56225027 MsG0380014539.01.T01:CDS
GGCGGCAGTGGCAACGGCGG+TGG 0.414955 3:+56225117 None:intergenic
AACGAAAGTTCAAGGATGAT+AGG 0.417823 3:-56223742 MsG0380014539.01.T01:CDS
CAGCAGGTCCTCTCCTTCCC+TGG 0.418269 3:+56224467 None:intergenic
CCTTATACTGTTAAGAAAAT+GGG 0.419691 3:-56224541 MsG0380014539.01.T01:CDS
GAGGAATAGGGGAGGTGGGA+TGG 0.423168 3:-56224257 MsG0380014539.01.T01:CDS
AATAATAATAATAGAGGTAG+TGG 0.424095 3:-56224343 MsG0380014539.01.T01:CDS
AGCGTGACCGTGAGCGTGAC+AGG 0.424888 3:-56223559 MsG0380014539.01.T01:CDS
GGATGCATATGAATGGTATA+GGG 0.425935 3:-56223997 MsG0380014539.01.T01:CDS
GTCAGCGGTGGCGGTGGTGG+CGG 0.426151 3:+56225099 None:intergenic
CCCAACTGCCGTGCCGAACC+AGG 0.426612 3:-56224485 MsG0380014539.01.T01:CDS
AATAGGGGAGGTGGGATGGG+TGG 0.428529 3:-56224253 MsG0380014539.01.T01:CDS
GCTGCTACCTTGAGTGGGAT+TGG 0.428560 3:-56224973 MsG0380014539.01.T01:CDS
TTACAAGCAGTTGTAGCTAA+AGG 0.428580 3:+56224622 None:intergenic
ATCGTGACCGCGAAAGGGGC+AGG 0.430941 3:-56223583 MsG0380014539.01.T01:CDS
AAGCAGCATACAATGTTAAT+CGG 0.437396 3:+56223352 None:intergenic
AGGAATAGGGGAGGTGGGAT+GGG 0.438994 3:-56224256 MsG0380014539.01.T01:CDS
TGAGGCTGGAGGGGTTAAGC+CGG 0.439256 3:-56224446 MsG0380014539.01.T01:CDS
GGTCGAGTGGGTGGCTATGC+AGG 0.440074 3:-56224127 MsG0380014539.01.T01:CDS
ACCGCCACCGCTGACAGCTC+AGG 0.440669 3:-56225091 MsG0380014539.01.T01:CDS
GGAGGTGGGATGGGTGGTAG+AGG 0.445989 3:-56224247 MsG0380014539.01.T01:CDS
GGTGGTGGCGGCAGTGGCAA+CGG 0.446608 3:+56225111 None:intergenic
AGGAAGTACTGTATTGTTTG+TGG 0.448264 3:-56224782 MsG0380014539.01.T01:CDS
TGGCCCGCCTATGATGCATC+CGG 0.449024 3:-56224179 MsG0380014539.01.T01:CDS
GCTGTCAGCGGTGGCGGTGG+TGG 0.449843 3:+56225096 None:intergenic
ACAAAACCACCAACCCCAAC+TGG 0.451082 3:+56224889 None:intergenic
TACAAGCAGTTGTAGCTAAA+GGG 0.453260 3:+56224623 None:intergenic
GGCACGGCAGTTGGGTTCAT+CGG 0.453943 3:+56224493 None:intergenic
ATGATTGGTAATGCTGGAAA+TGG 0.454111 3:-56224223 MsG0380014539.01.T01:CDS
CAGGGTGGTGATACTGGTGT+TGG 0.454512 3:-56224946 MsG0380014539.01.T01:CDS
GGTCCTCTCCTTCCCTGGTT+CGG 0.456096 3:+56224472 None:intergenic
GTGACAGGCACAGGGAAGAC+AGG 0.456868 3:-56223544 MsG0380014539.01.T01:CDS
AATAATAGAGGTAGTGGAAG+AGG 0.461398 3:-56224337 MsG0380014539.01.T01:CDS
CACGCTCCCTGCCCCTTTCG+CGG 0.463242 3:+56223576 None:intergenic
AGCCGGGTGGTGGTAACGTT+GGG 0.463724 3:-56224429 MsG0380014539.01.T01:CDS
ACCGTGAGCGTGACAGGCAC+AGG 0.464655 3:-56223553 MsG0380014539.01.T01:CDS
GGTGGCTATGCAGGCTATCC+CGG 0.469170 3:-56224118 MsG0380014539.01.T01:CDS
CCGCTGACAGCTCAGGGTGC+AGG 0.469420 3:-56225084 MsG0380014539.01.T01:CDS
GAAGTGGGTGTTCAAGGAGG+TGG 0.470313 3:-56225021 MsG0380014539.01.T01:CDS
GGATGGGGCGGTGATGAACT+TGG 0.471731 3:-56223911 MsG0380014539.01.T01:CDS
GAACGGAGGCGTTGGGCCAC+CGG 0.473719 3:+56224099 None:intergenic
TACCCTGGCGTTGGTATGCA+TGG 0.474635 3:-56224058 MsG0380014539.01.T01:CDS
TACCAGAGAACGGAGGCGTT+GGG 0.474637 3:+56224092 None:intergenic
AGAGGGAACAATCCTGGGAT+GGG 0.479937 3:-56224304 MsG0380014539.01.T01:CDS
AACGGAGGCGTTGGGCCACC+GGG 0.480944 3:+56224100 None:intergenic
ACCATGATCGTGACCGCGAA+AGG 0.481425 3:-56223589 MsG0380014539.01.T01:CDS
GACAGCTCAGGGTGCAGGTG+GGG 0.483944 3:-56225079 MsG0380014539.01.T01:CDS
TGTTTGTGGGTGATTTGCAT+TGG 0.484112 3:-56224768 MsG0380014539.01.T01:CDS
GAGGGAACAATCCTGGGATG+GGG 0.485801 3:-56224303 MsG0380014539.01.T01:CDS
AGGTTGCAGAGTCAAGTTAT+GGG 0.486411 3:-56223880 MsG0380014539.01.T01:CDS
TTAACCCCTCCAGCCTCAGC+AGG 0.488064 3:+56224451 None:intergenic
GGTGGTGGTAACGTTGGGAC+AGG 0.489426 3:-56224424 MsG0380014539.01.T01:CDS
GAGGCTGGAGGGGTTAAGCC+GGG 0.490666 3:-56224445 MsG0380014539.01.T01:CDS
GCCGCATCTGACCATCAGTA+TGG 0.490857 3:-56223851 MsG0380014539.01.T01:CDS
CCCTGTGCCTGTCACGCTCA+CGG 0.493425 3:+56223552 None:intergenic
AGAGGTATGATTGGTAATGC+TGG 0.493763 3:-56224229 MsG0380014539.01.T01:CDS
AAGAATCTGATTATGGAAAG+AGG 0.493864 3:-56223388 MsG0380014539.01.T01:CDS
TACTTCTGAACGAAAGTTCA+AGG 0.495222 3:-56223750 MsG0380014539.01.T01:CDS
AGGGTGGTGATACTGGTGTT+GGG 0.495260 3:-56224945 MsG0380014539.01.T01:CDS
GCTACAACTGCTTGTAAGGA+AGG 0.495643 3:-56224616 MsG0380014539.01.T01:CDS
AATCCTGGGATGGGGAATAG+AGG 0.496321 3:-56224295 MsG0380014539.01.T01:CDS
AAGGTTGCAGAGTCAAGTTA+TGG 0.496773 3:-56223881 MsG0380014539.01.T01:CDS
AGAGGACCTGCTGAGGCTGG+AGG 0.497491 3:-56224457 MsG0380014539.01.T01:CDS
GGTAACTACCAAGGTGGAGA+TGG 0.498265 3:-56224400 MsG0380014539.01.T01:CDS
GAATCGTGATGATAGAGAGA+TGG 0.499275 3:-56223654 MsG0380014539.01.T01:CDS
CTTTACAACGATGTTAATGT+TGG 0.501235 3:-56225222 MsG0380014539.01.T01:CDS
GGCGGGCCAGCACCAATACC+AGG 0.504684 3:+56224193 None:intergenic
AATGGATATGGACCTGGTAT+TGG 0.508101 3:-56224205 MsG0380014539.01.T01:CDS
TATGGACCTGGTATTGGTGC+TGG 0.509297 3:-56224199 MsG0380014539.01.T01:CDS
GAGGACCTGCTGAGGCTGGA+GGG 0.509505 3:-56224456 MsG0380014539.01.T01:CDS
CTGACAGCTCAGGGTGCAGG+TGG 0.510244 3:-56225081 MsG0380014539.01.T01:CDS
GATGATCCCACCATCAGGTA+TGG 0.510864 3:-56223975 MsG0380014539.01.T01:CDS
ATAGAGGATCAGAGAGGGAC+TGG 0.511140 3:-56223778 MsG0380014539.01.T01:CDS
TAGCCACCCACTCGACCAAT+GGG 0.511433 3:+56224133 None:intergenic
TACTGTTAAGAAAATGGGAG+AGG 0.512487 3:-56224536 MsG0380014539.01.T01:CDS
GGATCCAAATATGGGTGGAT+GGG 0.513727 3:-56223927 MsG0380014539.01.T01:CDS
CTCACCACATGATGATGAAT+GGG 0.516400 3:-56223483 MsG0380014539.01.T01:CDS
AGATGGGACGAGAACGGTCT+CGG 0.516660 3:-56223637 MsG0380014539.01.T01:CDS
CATCCACCCATATTTGGATC+CGG 0.517109 3:+56223929 None:intergenic
AAGTGGGTGTTCAAGGAGGT+GGG 0.517816 3:-56225020 MsG0380014539.01.T01:CDS
ATGTGGCCGGATCCAAATAT+GGG 0.518251 3:-56223935 MsG0380014539.01.T01:CDS
CCAAATATGGGTGGATGGGG+CGG 0.518434 3:-56223923 MsG0380014539.01.T01:CDS
ATACCAGAGAACGGAGGCGT+TGG 0.518571 3:+56224091 None:intergenic
GATCCAAATATGGGTGGATG+GGG 0.519015 3:-56223926 MsG0380014539.01.T01:CDS
ATGGTCATTTATTTAATGGT+AGG 0.519190 3:-56224588 MsG0380014539.01.T01:CDS
ATAGGGATGATCCCACCATC+AGG 0.519467 3:-56223980 MsG0380014539.01.T01:CDS
GGAAGTACTGTATTGTTTGT+GGG 0.520117 3:-56224781 MsG0380014539.01.T01:CDS
GGTATGCTGCCTTCATACCC+TGG 0.522652 3:-56224073 MsG0380014539.01.T01:CDS
GATGGGACGAGAACGGTCTC+GGG 0.522737 3:-56223636 MsG0380014539.01.T01:CDS
GCTGGAGGGGTTAAGCCGGG+TGG 0.522844 3:-56224442 MsG0380014539.01.T01:CDS
GGCCCGCCTATGATGCATCC+GGG 0.524002 3:-56224178 MsG0380014539.01.T01:CDS
GGTATGGATGGTCCTAATAT+GGG 0.524570 3:-56223959 MsG0380014539.01.T01:CDS
AAGCCGGGTGGTGGTAACGT+TGG 0.525484 3:-56224430 MsG0380014539.01.T01:CDS
TGAGCTGTCAGCGGTGGCGG+TGG 0.526115 3:+56225093 None:intergenic
GGAAGAGGGATGCATATGAA+TGG 0.526559 3:-56224004 MsG0380014539.01.T01:CDS
TGATGAGACAAGGTCAAGGT+GGG 0.528752 3:-56224843 MsG0380014539.01.T01:CDS
GTAGCACCTCATGTTAATCC+TGG 0.530218 3:-56224034 MsG0380014539.01.T01:CDS
GACATGACCTTGAAGAAAGA+AGG 0.530426 3:-56223676 MsG0380014539.01.T01:CDS
CCGATGAGGAATAGGGGAGG+TGG 0.532579 3:-56224262 MsG0380014539.01.T01:CDS
CGGATCCAAATATGGGTGGA+TGG 0.533015 3:-56223928 MsG0380014539.01.T01:CDS
AACGATGTTAATGTTGGTGA+GGG 0.535233 3:-56225216 MsG0380014539.01.T01:CDS
GCTTGTAAGGAAGGGATGAA+TGG 0.535310 3:-56224607 MsG0380014539.01.T01:CDS
ATACTGGTGTTGGGTTGCAG+GGG 0.535555 3:-56224936 MsG0380014539.01.T01:CDS
ATGGACAAGTGAAGGAAGTG+AGG 0.539678 3:-56224705 MsG0380014539.01.T01:CDS
TCCTAATATGGGAATGTGGC+CGG 0.540113 3:-56223948 MsG0380014539.01.T01:CDS
TGCTACCTTGAGTGGGATTG+GGG 0.542143 3:-56224971 MsG0380014539.01.T01:CDS
ACTCACCACATGATGATGAA+TGG 0.543564 3:-56223484 MsG0380014539.01.T01:CDS
CCATGATCGTGACCGCGAAA+GGG 0.543852 3:-56223588 MsG0380014539.01.T01:CDS
TTGAGTGGGATTGGGGAACA+GGG 0.547331 3:-56224964 MsG0380014539.01.T01:CDS
CTGCCTTCATACCCTGGCGT+TGG 0.547967 3:-56224067 MsG0380014539.01.T01:CDS
CAACGATGTTAATGTTGGTG+AGG 0.548295 3:-56225217 MsG0380014539.01.T01:CDS
CTGCCGTGCCGAACCAGGGA+AGG 0.551571 3:-56224480 MsG0380014539.01.T01:CDS
TGACAGCTCAGGGTGCAGGT+GGG 0.551841 3:-56225080 MsG0380014539.01.T01:CDS
GGTGGTCCCATTGGTCGAGT+GGG 0.552959 3:-56224139 MsG0380014539.01.T01:CDS
CGGATATAGCTTCGTTGCGG+TGG 0.553191 3:+56225295 None:intergenic
ACGAAAGTTCAAGGATGATA+GGG 0.554739 3:-56223741 MsG0380014539.01.T01:CDS
CACATGATGATGAATGGGAG+AGG 0.555949 3:-56223478 MsG0380014539.01.T01:CDS
CAACAGCAGCAACCACCAGT+TGG 0.557553 3:-56224904 MsG0380014539.01.T01:CDS
AATCGTGATGATAGAGAGAT+GGG 0.558482 3:-56223653 MsG0380014539.01.T01:CDS
CATGAAACCATCGTCGGCGA+CGG 0.558519 3:+56225272 None:intergenic
CCAATGGGACCACCAAATGA+AGG 0.559437 3:+56224148 None:intergenic
ATACCAACGCCAGGGTATGA+AGG 0.560034 3:+56224064 None:intergenic
AGGATCAGAGAGGGACTGGT+CGG 0.560796 3:-56223774 MsG0380014539.01.T01:CDS
GGATCAGAGAGGGACTGGTC+GGG 0.561883 3:-56223773 MsG0380014539.01.T01:CDS
ATGGGTGGTAGAGGTATGAT+TGG 0.562333 3:-56224238 MsG0380014539.01.T01:CDS
CTCGAGATCTTGCACGATCA+CGG 0.563600 3:+56223612 None:intergenic
GTCCCAACGTTACCACCACC+CGG 0.563624 3:+56224427 None:intergenic
CCACCTCCCCTATTCCTCAT+CGG 0.563733 3:+56224262 None:intergenic
GGCGGTGATGAACTTGGTGG+TGG 0.565264 3:-56223905 MsG0380014539.01.T01:CDS
AACCCGGATGCATCATAGGC+GGG 0.565290 3:+56224176 None:intergenic
GAGAGGGAACAATCCTGGGA+TGG 0.567145 3:-56224305 MsG0380014539.01.T01:CDS
ACTCCATGCATACCAACGCC+AGG 0.567317 3:+56224055 None:intergenic
AGGACCTGCTGAGGCTGGAG+GGG 0.567841 3:-56224455 MsG0380014539.01.T01:CDS
GGTGGTAACGTTGGGACAGG+TGG 0.568635 3:-56224421 MsG0380014539.01.T01:CDS
GAAACCATCGTCGGCGACGG+CGG 0.569379 3:+56225275 None:intergenic
CTCTCCCATTCATCATCATG+TGG 0.570942 3:+56223479 None:intergenic
GTAACTACCAAGGTGGAGAT+GGG 0.571158 3:-56224399 MsG0380014539.01.T01:CDS
CTGATTATGGAAAGAGGAGG+CGG 0.572300 3:-56223382 MsG0380014539.01.T01:CDS
ATCCCACCATCAGGTATGGA+TGG 0.572882 3:-56223971 MsG0380014539.01.T01:CDS
GCACCCTGAGCTGTCAGCGG+TGG 0.573484 3:+56225087 None:intergenic
CCGCCACCGCTGACAGCTCA+GGG 0.574160 3:-56225090 MsG0380014539.01.T01:CDS
GGTCCCATTGGTCGAGTGGG+TGG 0.575180 3:-56224136 MsG0380014539.01.T01:CDS
ATAGCCACCCACTCGACCAA+TGG 0.575918 3:+56224132 None:intergenic
TGACAGGCACAGGGAAGACA+GGG 0.576617 3:-56223543 MsG0380014539.01.T01:CDS
GGTAGTGGAAGAGGTAATTG+GGG 0.578149 3:-56224328 MsG0380014539.01.T01:CDS
TATTATTCCCATCTCCACCT+TGG 0.580443 3:+56224392 None:intergenic
TGTCCTCTATTCCCCATCCC+AGG 0.582019 3:+56224292 None:intergenic
ATATCCGCCGTCGCCGACGA+TGG 0.582224 3:-56225279 MsG0380014539.01.T01:CDS
GGTGGCGGCAGTGGCAACGG+CGG 0.584476 3:+56225114 None:intergenic
CATGATCGTGACCGCGAAAG+GGG 0.586050 3:-56223587 MsG0380014539.01.T01:CDS
GAAATCGAAAGGGTACTGTC+AGG 0.586712 3:-56224659 MsG0380014539.01.T01:CDS
AAAGCTAGTGGGAAATCGAA+AGG 0.587476 3:-56224670 MsG0380014539.01.T01:CDS
TTGATGAGACAAGGTCAAGG+TGG 0.588311 3:-56224844 MsG0380014539.01.T01:CDS
TGGTGGTCCCATTGGTCGAG+TGG 0.588922 3:-56224140 MsG0380014539.01.T01:CDS
TTGTAAGTATGGACAAGTGA+AGG 0.589535 3:-56224713 MsG0380014539.01.T01:CDS
ATGAGACAAGGTCAAGGTGG+GGG 0.589908 3:-56224841 MsG0380014539.01.T01:CDS
CCTGCACCCTGAGCTGTCAG+CGG 0.591975 3:+56225084 None:intergenic
TCGTGACCGCGAAAGGGGCA+GGG 0.592510 3:-56223582 MsG0380014539.01.T01:CDS
GGGAAGGAGAGGACCTGCTG+AGG 0.593606 3:-56224464 MsG0380014539.01.T01:CDS
AATGAAGTGGGTGTTCAAGG+AGG 0.597201 3:-56225024 MsG0380014539.01.T01:CDS
CTACAACTGCTTGTAAGGAA+GGG 0.599474 3:-56224615 MsG0380014539.01.T01:CDS
CATCATCATGTGGTGAGTCA+CGG 0.599582 3:+56223489 None:intergenic
GACCATCCATACCTGATGGT+GGG 0.600120 3:+56223969 None:intergenic
GTGCCGAACCAGGGAAGGAG+AGG 0.601927 3:-56224475 MsG0380014539.01.T01:CDS
TGATGAACTTGGTGGTGGCA+AGG 0.603803 3:-56223900 MsG0380014539.01.T01:CDS
CGATGAGGAATAGGGGAGGT+GGG 0.604019 3:-56224261 MsG0380014539.01.T01:CDS
CCAACTGCCGTGCCGAACCA+GGG 0.605013 3:-56224484 MsG0380014539.01.T01:CDS
ACATGATGATGAATGGGAGA+GGG 0.605154 3:-56223477 MsG0380014539.01.T01:CDS
AAAAGATAGAGGATCAGAGA+GGG 0.607806 3:-56223783 MsG0380014539.01.T01:CDS
TCTCCTTCCCTGGTTCGGCA+CGG 0.609224 3:+56224477 None:intergenic
GATTCACCTCACCATACTGA+TGG 0.610696 3:+56223840 None:intergenic
CTGTTCCCCAATCCCACTCA+AGG 0.613074 3:+56224966 None:intergenic
CAGCAACCACCAGTTGGGGT+TGG 0.614997 3:-56224898 MsG0380014539.01.T01:CDS
ATGGACGAAGACGGAGGGCA+CGG 0.616271 3:-56225330 MsG0380014539.01.T01:CDS
GATGAGACAAGGTCAAGGTG+GGG 0.618372 3:-56224842 MsG0380014539.01.T01:CDS
GGACCATCCATACCTGATGG+TGG 0.619938 3:+56223968 None:intergenic
AAGCTAGTGGGAAATCGAAA+GGG 0.620489 3:-56224669 MsG0380014539.01.T01:CDS
TGCAGAGTCAAGTTATGGGG+AGG 0.620724 3:-56223876 MsG0380014539.01.T01:CDS
CCAAATGAAGGATCAAAACC+CGG 0.622976 3:+56224160 None:intergenic
AACCCTAGAATGGACGAAGA+CGG 0.626102 3:-56225339 None:intergenic
CCGTGAGCGTGACAGGCACA+GGG 0.629238 3:-56223552 MsG0380014539.01.T01:CDS
ACGATTATCAACACATGAGG+AGG 0.629599 3:-56223426 MsG0380014539.01.T01:CDS
ACAGCAGCAACCACCAGTTG+GGG 0.630307 3:-56224902 MsG0380014539.01.T01:CDS
TTAGGACCATCCATACCTGA+TGG 0.634109 3:+56223965 None:intergenic
CATGATGATGAATGGGAGAG+GGG 0.637097 3:-56223476 MsG0380014539.01.T01:CDS
AGAGCTTATAGGGAATGAAG+TGG 0.637410 3:-56225037 MsG0380014539.01.T01:CDS
ATAGAGAGATGGGACGAGAA+CGG 0.638074 3:-56223643 MsG0380014539.01.T01:CDS
TGGGGCGGTGATGAACTTGG+TGG 0.638251 3:-56223908 MsG0380014539.01.T01:CDS
GGTAATCCGATGAGGAATAG+GGG 0.641229 3:-56224268 MsG0380014539.01.T01:CDS
CTAGAATGGACGAAGACGGA+GGG 0.646038 3:-56225335 None:intergenic
GAAGGCAGCATACCAGAGAA+CGG 0.646857 3:+56224082 None:intergenic
ATCTGACCATCAGTATGGTG+AGG 0.649942 3:-56223846 MsG0380014539.01.T01:CDS
ACCATACTGATGGTCAGATG+CGG 0.650323 3:+56223850 None:intergenic
AAACCACCAACCCCAACTGG+TGG 0.650926 3:+56224892 None:intergenic
CAGCATACAATGTTAATCGG+AGG 0.651734 3:+56223355 None:intergenic
GGCTATGCAGGCTATCCCGG+TGG 0.651990 3:-56224115 MsG0380014539.01.T01:CDS
TGAATCCTGATAGAGCTGGT+TGG 0.652170 3:-56223823 MsG0380014539.01.T01:CDS
GAGGTGAATCCTGATAGAGC+TGG 0.653437 3:-56223827 MsG0380014539.01.T01:CDS
AGTGGGATTGGGGAACAGGG+TGG 0.653460 3:-56224961 MsG0380014539.01.T01:CDS
GGGATGGGGAATAGAGGACA+TGG 0.659072 3:-56224289 MsG0380014539.01.T01:CDS
GGTTGCAGAGTCAAGTTATG+GGG 0.660062 3:-56223879 MsG0380014539.01.T01:CDS
GAGCTTATAGGGAATGAAGT+GGG 0.663730 3:-56225036 MsG0380014539.01.T01:CDS
ATCACGATTATCAACACATG+AGG 0.664539 3:-56223429 MsG0380014539.01.T01:CDS
AAACCCGGATGCATCATAGG+CGG 0.669125 3:+56224175 None:intergenic
GCTGGAAATGGATATGGACC+TGG 0.670595 3:-56224211 MsG0380014539.01.T01:CDS
TTCGGCCATGAAACCATCGT+CGG 0.674416 3:+56225266 None:intergenic
CTCCATGCATACCAACGCCA+GGG 0.674480 3:+56224056 None:intergenic
TGGCCGGATCCAAATATGGG+TGG 0.678426 3:-56223932 MsG0380014539.01.T01:CDS
CCTAGAATGGACGAAGACGG+AGG 0.678701 3:-56225336 None:intergenic
GGGACAGGTGGTAACTACCA+AGG 0.686672 3:-56224409 MsG0380014539.01.T01:CDS
GAGGACATGGTAATCCGATG+AGG 0.691280 3:-56224276 MsG0380014539.01.T01:CDS
GTAGTGGAAGAGGTAATTGG+GGG 0.705090 3:-56224327 MsG0380014539.01.T01:CDS
CGGCGGATATAGCTTCGTTG+CGG 0.707556 3:+56225292 None:intergenic
TTCGCATAAGATACAACACA+CGG 0.715974 3:+56224565 None:intergenic
ATGGTCCTAATATGGGAATG+TGG 0.718453 3:-56223952 MsG0380014539.01.T01:CDS
AATGATGGGTTGATGAGACA+AGG 0.719669 3:-56224853 MsG0380014539.01.T01:CDS
GACGAAGACGGAGGGCACGG+TGG 0.722917 3:-56225327 MsG0380014539.01.T01:CDS
ACAGGTGGTAACTACCAAGG+TGG 0.723879 3:-56224406 MsG0380014539.01.T01:CDS
AATCCGATGAGGAATAGGGG+AGG 0.734906 3:-56224265 MsG0380014539.01.T01:CDS
GGGTTGATGAGACAAGGTCA+AGG 0.736847 3:-56224847 MsG0380014539.01.T01:CDS
AATCTGATTATGGAAAGAGG+AGG 0.755236 3:-56223385 MsG0380014539.01.T01:CDS
GGCAGCATACCAGAGAACGG+AGG 0.758901 3:+56224085 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAGAGGTAG+TGG - Chr3:56224354-56224373 MsG0380014539.01.T01:CDS 20.0%
!! ATGAATGGTCATTTATTTAA+TGG - Chr3:56224105-56224124 MsG0380014539.01.T01:CDS 20.0%
! ATGGTCATTTATTTAATGGT+AGG - Chr3:56224109-56224128 MsG0380014539.01.T01:CDS 25.0%
! CCTTATACTGTTAAGAAAAT+GGG - Chr3:56224156-56224175 MsG0380014539.01.T01:CDS 25.0%
! TCCTTATACTGTTAAGAAAA+TGG - Chr3:56224155-56224174 MsG0380014539.01.T01:CDS 25.0%
! TCTAGAAAAGAATCTGATTA+TGG - Chr3:56225302-56225321 MsG0380014539.01.T01:CDS 25.0%
AAGAATCTGATTATGGAAAG+AGG - Chr3:56225309-56225328 MsG0380014539.01.T01:CDS 30.0%
CTTTACAACGATGTTAATGT+TGG - Chr3:56223475-56223494 MsG0380014539.01.T01:CDS 30.0%
TTCAGAATCAAGAGCTTATA+GGG - Chr3:56223650-56223669 MsG0380014539.01.T01:CDS 30.0%
TTCGTAATCTTCATCTTCTT+CGG + Chr3:56223452-56223471 None:intergenic 30.0%
TTTCAGAATCAAGAGCTTAT+AGG - Chr3:56223649-56223668 MsG0380014539.01.T01:CDS 30.0%
! CCCATTTTCTTAACAGTATA+AGG + Chr3:56224159-56224178 None:intergenic 30.0%
! TCTTTTTCTCTCATAGCATT+AGG + Chr3:56224900-56224919 None:intergenic 30.0%
AAAAAGATAGAGGATCAGAG+AGG - Chr3:56224913-56224932 MsG0380014539.01.T01:CDS 35.0%
AAAAAGCCAGGATTAACATG+AGG + Chr3:56224672-56224691 None:intergenic 35.0%
AAAAGATAGAGGATCAGAGA+GGG - Chr3:56224914-56224933 MsG0380014539.01.T01:CDS 35.0%
AACGAAAGTTCAAGGATGAT+AGG - Chr3:56224955-56224974 MsG0380014539.01.T01:CDS 35.0%
AATCGTGATGATAGAGAGAT+GGG - Chr3:56225044-56225063 MsG0380014539.01.T01:CDS 35.0%
AATCTGATTATGGAAAGAGG+AGG - Chr3:56225312-56225331 MsG0380014539.01.T01:CDS 35.0%
ACGAAAGTTCAAGGATGATA+GGG - Chr3:56224956-56224975 MsG0380014539.01.T01:CDS 35.0%
ATCACGATTATCAACACATG+AGG - Chr3:56225268-56225287 MsG0380014539.01.T01:CDS 35.0%
GCTATGAGAGAAAAAGATAG+AGG - Chr3:56224903-56224922 MsG0380014539.01.T01:CDS 35.0%
GGATGCATATGAATGGTATA+GGG - Chr3:56224700-56224719 MsG0380014539.01.T01:CDS 35.0%
TACAAGCAGTTGTAGCTAAA+GGG + Chr3:56224077-56224096 None:intergenic 35.0%
TACTGTTAAGAAAATGGGAG+AGG - Chr3:56224161-56224180 MsG0380014539.01.T01:CDS 35.0%
TACTTCTGAACGAAAGTTCA+AGG - Chr3:56224947-56224966 MsG0380014539.01.T01:CDS 35.0%
TTACAAGCAGTTGTAGCTAA+AGG + Chr3:56224078-56224097 None:intergenic 35.0%
TTCGCATAAGATACAACACA+CGG + Chr3:56224135-56224154 None:intergenic 35.0%
TTGTAAGTATGGACAAGTGA+AGG - Chr3:56223984-56224003 MsG0380014539.01.T01:CDS 35.0%
TTTAGCTACAACTGCTTGTA+AGG - Chr3:56224077-56224096 MsG0380014539.01.T01:CDS 35.0%
! AACGATGTTAATGTTGGTGA+GGG - Chr3:56223481-56223500 MsG0380014539.01.T01:CDS 35.0%
!! AATAATAGAGGTAGTGGAAG+AGG - Chr3:56224360-56224379 MsG0380014539.01.T01:CDS 35.0%
!! AGGAAGTACTGTATTGTTTG+TGG - Chr3:56223915-56223934 MsG0380014539.01.T01:CDS 35.0%
!! ATGATTGGTAATGCTGGAAA+TGG - Chr3:56224474-56224493 MsG0380014539.01.T01:CDS 35.0%
!! GGAAGTACTGTATTGTTTGT+GGG - Chr3:56223916-56223935 MsG0380014539.01.T01:CDS 35.0%
!!! CATGTTAATCCTGGCTTTTT+TGG - Chr3:56224672-56224691 MsG0380014539.01.T01:CDS 35.0%
AAAAAGCTGCTACCTTGAGT+GGG - Chr3:56223719-56223738 MsG0380014539.01.T01:CDS 40.0%
AAAGCTAGTGGGAAATCGAA+AGG - Chr3:56224027-56224046 MsG0380014539.01.T01:CDS 40.0%
AAGCTAGTGGGAAATCGAAA+GGG - Chr3:56224028-56224047 MsG0380014539.01.T01:CDS 40.0%
AAGGTTGCAGAGTCAAGTTA+TGG - Chr3:56224816-56224835 MsG0380014539.01.T01:CDS 40.0%
AATGGATATGGACCTGGTAT+TGG - Chr3:56224492-56224511 MsG0380014539.01.T01:CDS 40.0%
ACGATTATCAACACATGAGG+AGG - Chr3:56225271-56225290 MsG0380014539.01.T01:CDS 40.0%
AGAGCTTATAGGGAATGAAG+TGG - Chr3:56223660-56223679 MsG0380014539.01.T01:CDS 40.0%
AGGTATGGATGGTCCTAATA+TGG - Chr3:56224737-56224756 MsG0380014539.01.T01:CDS 40.0%
AGGTTGCAGAGTCAAGTTAT+GGG - Chr3:56224817-56224836 MsG0380014539.01.T01:CDS 40.0%
ATGGTAATCCGATGAGGAAT+AGG - Chr3:56224427-56224446 MsG0380014539.01.T01:CDS 40.0%
ATGGTCCTAATATGGGAATG+TGG - Chr3:56224745-56224764 MsG0380014539.01.T01:CDS 40.0%
CAACGATGTTAATGTTGGTG+AGG - Chr3:56223480-56223499 MsG0380014539.01.T01:CDS 40.0%
CACGATTCCTTCTTTCTTCA+AGG + Chr3:56225031-56225050 None:intergenic 40.0%
CCAAATGAAGGATCAAAACC+CGG + Chr3:56224540-56224559 None:intergenic 40.0%
CTACAACTGCTTGTAAGGAA+GGG - Chr3:56224082-56224101 MsG0380014539.01.T01:CDS 40.0%
GAATCGTGATGATAGAGAGA+TGG - Chr3:56225043-56225062 MsG0380014539.01.T01:CDS 40.0%
GACATGACCTTGAAGAAAGA+AGG - Chr3:56225021-56225040 MsG0380014539.01.T01:CDS 40.0%
GAGCTTATAGGGAATGAAGT+GGG - Chr3:56223661-56223680 MsG0380014539.01.T01:CDS 40.0%
GGGATGCATATGAATGGTAT+AGG - Chr3:56224699-56224718 MsG0380014539.01.T01:CDS 40.0%
GGTAATGCTGGAAATGGATA+TGG - Chr3:56224480-56224499 MsG0380014539.01.T01:CDS 40.0%
GGTATGGATGGTCCTAATAT+GGG - Chr3:56224738-56224757 MsG0380014539.01.T01:CDS 40.0%
GTGGGATTAGGGTTGAATTA+GGG - Chr3:56223695-56223714 MsG0380014539.01.T01:CDS 40.0%
TATTATTCCCATCTCCACCT+TGG + Chr3:56224308-56224327 None:intergenic 40.0%
TGGTAATCCGATGAGGAATA+GGG - Chr3:56224428-56224447 MsG0380014539.01.T01:CDS 40.0%
! ACATGATGATGAATGGGAGA+GGG - Chr3:56225220-56225239 MsG0380014539.01.T01:CDS 40.0%
! ACTCACCACATGATGATGAA+TGG - Chr3:56225213-56225232 MsG0380014539.01.T01:CDS 40.0%
! CGGAAGCTTCTTTTCTTCAA+CGG + Chr3:56223557-56223576 None:intergenic 40.0%
! CTCACCACATGATGATGAAT+GGG - Chr3:56225214-56225233 MsG0380014539.01.T01:CDS 40.0%
! GAAGCTGAGCTTTGTAAGTA+TGG - Chr3:56223973-56223992 MsG0380014539.01.T01:CDS 40.0%
! TGTTTGTGGGTGATTTGCAT+TGG - Chr3:56223929-56223948 MsG0380014539.01.T01:CDS 40.0%
! TTTTCGACGAGAAAGCTAGT+GGG - Chr3:56224016-56224035 MsG0380014539.01.T01:CDS 40.0%
!! AATGATGGGTTGATGAGACA+AGG - Chr3:56223844-56223863 MsG0380014539.01.T01:CDS 40.0%
!! AGAGGTATGATTGGTAATGC+TGG - Chr3:56224468-56224487 MsG0380014539.01.T01:CDS 40.0%
!! AGGTAGTGGAAGAGGTAATT+GGG - Chr3:56224368-56224387 MsG0380014539.01.T01:CDS 40.0%
!! GGTTTTGATCCTTCATTTGG+TGG - Chr3:56224540-56224559 MsG0380014539.01.T01:CDS 40.0%
!! TGGGAGAGGCTTTGAATAAT+AGG - Chr3:56224175-56224194 MsG0380014539.01.T01:CDS 40.0%
!! TTTTTCGACGAGAAAGCTAG+TGG - Chr3:56224015-56224034 MsG0380014539.01.T01:CDS 40.0%
!!! AATCCTGGCTTTTTTGGAAG+AGG - Chr3:56224678-56224697 MsG0380014539.01.T01:CDS 40.0%
!!! ATCCTGGCTTTTTTGGAAGA+GGG - Chr3:56224679-56224698 MsG0380014539.01.T01:CDS 40.0%
AATGAAGTGGGTGTTCAAGG+AGG - Chr3:56223673-56223692 MsG0380014539.01.T01:CDS 45.0%
AATGTGGCCGGATCCAAATA+TGG - Chr3:56224761-56224780 MsG0380014539.01.T01:CDS 45.0%
ACCATACTGATGGTCAGATG+CGG + Chr3:56224850-56224869 None:intergenic 45.0%
AGCACCTAGAGAAAAAGACG+TGG - Chr3:56224998-56225017 MsG0380014539.01.T01:CDS 45.0%
ATAGAGAGATGGGACGAGAA+CGG - Chr3:56225054-56225073 MsG0380014539.01.T01:CDS 45.0%
ATCCCTCTTCCAAAAAAGCC+AGG + Chr3:56224684-56224703 None:intergenic 45.0%
ATCTGACCATCAGTATGGTG+AGG - Chr3:56224851-56224870 MsG0380014539.01.T01:CDS 45.0%
ATGGACAAGTGAAGGAAGTG+AGG - Chr3:56223992-56224011 MsG0380014539.01.T01:CDS 45.0%
ATGTGGCCGGATCCAAATAT+GGG - Chr3:56224762-56224781 MsG0380014539.01.T01:CDS 45.0%
CAAAAAGCTGCTACCTTGAG+TGG - Chr3:56223718-56223737 MsG0380014539.01.T01:CDS 45.0%
CATCATCATGTGGTGAGTCA+CGG + Chr3:56225211-56225230 None:intergenic 45.0%
CATCCACCCATATTTGGATC+CGG + Chr3:56224771-56224790 None:intergenic 45.0%
CTCTCCCATTCATCATCATG+TGG + Chr3:56225221-56225240 None:intergenic 45.0%
CTGATTATGGAAAGAGGAGG+CGG - Chr3:56225315-56225334 MsG0380014539.01.T01:CDS 45.0%
GATCCAAATATGGGTGGATG+GGG - Chr3:56224771-56224790 MsG0380014539.01.T01:CDS 45.0%
GATTCACCTCACCATACTGA+TGG + Chr3:56224860-56224879 None:intergenic 45.0%
GCACCTAGAGAAAAAGACGT+GGG - Chr3:56224999-56225018 MsG0380014539.01.T01:CDS 45.0%
GCTACAACTGCTTGTAAGGA+AGG - Chr3:56224081-56224100 MsG0380014539.01.T01:CDS 45.0%
GCTTGTAAGGAAGGGATGAA+TGG - Chr3:56224090-56224109 MsG0380014539.01.T01:CDS 45.0%
GGAAGAGGGATGCATATGAA+TGG - Chr3:56224693-56224712 MsG0380014539.01.T01:CDS 45.0%
GGATCCAAATATGGGTGGAT+GGG - Chr3:56224770-56224789 MsG0380014539.01.T01:CDS 45.0%
GGTAATCCGATGAGGAATAG+GGG - Chr3:56224429-56224448 MsG0380014539.01.T01:CDS 45.0%
GGTGGGATTAGGGTTGAATT+AGG - Chr3:56223694-56223713 MsG0380014539.01.T01:CDS 45.0%
GGTTGCAGAGTCAAGTTATG+GGG - Chr3:56224818-56224837 MsG0380014539.01.T01:CDS 45.0%
GTAACTACCAAGGTGGAGAT+GGG - Chr3:56224298-56224317 MsG0380014539.01.T01:CDS 45.0%
GTAGCACCTCATGTTAATCC+TGG - Chr3:56224663-56224682 MsG0380014539.01.T01:CDS 45.0%
TCAAAACCCGGATGCATCAT+AGG + Chr3:56224528-56224547 None:intergenic 45.0%
TCCTAATATGGGAATGTGGC+CGG - Chr3:56224749-56224768 MsG0380014539.01.T01:CDS 45.0%
TGAATCCTGATAGAGCTGGT+TGG - Chr3:56224874-56224893 MsG0380014539.01.T01:CDS 45.0%
TGATGAGACAAGGTCAAGGT+GGG - Chr3:56223854-56223873 MsG0380014539.01.T01:CDS 45.0%
TGTTCAAGGAGGTGGGATTA+GGG - Chr3:56223684-56223703 MsG0380014539.01.T01:CDS 45.0%
TTAGGACCATCCATACCTGA+TGG + Chr3:56224735-56224754 None:intergenic 45.0%
TTGATGAGACAAGGTCAAGG+TGG - Chr3:56223853-56223872 MsG0380014539.01.T01:CDS 45.0%
! ATGGGTGGTAGAGGTATGAT+TGG - Chr3:56224459-56224478 MsG0380014539.01.T01:CDS 45.0%
! CACATGATGATGAATGGGAG+AGG - Chr3:56225219-56225238 MsG0380014539.01.T01:CDS 45.0%
! CATGATGATGAATGGGAGAG+GGG - Chr3:56225221-56225240 MsG0380014539.01.T01:CDS 45.0%
! GTAGTGGAAGAGGTAATTGG+GGG - Chr3:56224370-56224389 MsG0380014539.01.T01:CDS 45.0%
! GTGGACTACTGATGCTGATT+TGG - Chr3:56223951-56223970 MsG0380014539.01.T01:CDS 45.0%
! TGTCCCACGTCTTTTTCTCT+AGG + Chr3:56225005-56225024 None:intergenic 45.0%
! TTGGGTTGCAGGGGATTATT+GGG - Chr3:56223770-56223789 MsG0380014539.01.T01:CDS 45.0%
! TTGTGGGTGATTTGCATTGG+TGG - Chr3:56223932-56223951 MsG0380014539.01.T01:CDS 45.0%
!! CCGGGTTTTGATCCTTCATT+TGG - Chr3:56224537-56224556 MsG0380014539.01.T01:CDS 45.0%
!! GAAATCGAAAGGGTACTGTC+AGG - Chr3:56224038-56224057 MsG0380014539.01.T01:CDS 45.0%
!! GAGGTAGTGGAAGAGGTAAT+TGG - Chr3:56224367-56224386 MsG0380014539.01.T01:CDS 45.0%
!! GGTAGTGGAAGAGGTAATTG+GGG - Chr3:56224369-56224388 MsG0380014539.01.T01:CDS 45.0%
!! TTGGGGGTGTTGGAAATGAT+GGG - Chr3:56223830-56223849 MsG0380014539.01.T01:CDS 45.0%
!!! TTGGGGTTGGTGGTTTTGTT+GGG - Chr3:56223812-56223831 MsG0380014539.01.T01:CDS 45.0%
!! AATTATAATAATAATAATAG+AGG - Chr3:56224348-56224367 MsG0380014539.01.T01:CDS 5.0%
AAACCCGGATGCATCATAGG+CGG + Chr3:56224525-56224544 None:intergenic 50.0%
AACAGCAGCAACCACCAGTT+GGG - Chr3:56223794-56223813 MsG0380014539.01.T01:CDS 50.0%
AAGTGGGTGTTCAAGGAGGT+GGG - Chr3:56223677-56223696 MsG0380014539.01.T01:CDS 50.0%
AATCCGATGAGGAATAGGGG+AGG - Chr3:56224432-56224451 MsG0380014539.01.T01:CDS 50.0%
AATCCTGGGATGGGGAATAG+AGG - Chr3:56224402-56224421 MsG0380014539.01.T01:CDS 50.0%
ACAAAACCACCAACCCCAAC+TGG + Chr3:56223811-56223830 None:intergenic 50.0%
ACAGGTGGTAACTACCAAGG+TGG - Chr3:56224291-56224310 MsG0380014539.01.T01:CDS 50.0%
AGAGGGAACAATCCTGGGAT+GGG - Chr3:56224393-56224412 MsG0380014539.01.T01:CDS 50.0%
AGGGTGGTGATACTGGTGTT+GGG - Chr3:56223752-56223771 MsG0380014539.01.T01:CDS 50.0%
ATACCAACGCCAGGGTATGA+AGG + Chr3:56224636-56224655 None:intergenic 50.0%
ATAGAGGATCAGAGAGGGAC+TGG - Chr3:56224919-56224938 MsG0380014539.01.T01:CDS 50.0%
ATAGGGATGATCCCACCATC+AGG - Chr3:56224717-56224736 MsG0380014539.01.T01:CDS 50.0%
ATCCCACCATCAGGTATGGA+TGG - Chr3:56224726-56224745 MsG0380014539.01.T01:CDS 50.0%
ATGAGACAAGGTCAAGGTGG+GGG - Chr3:56223856-56223875 MsG0380014539.01.T01:CDS 50.0%
CCAATGGGACCACCAAATGA+AGG + Chr3:56224552-56224571 None:intergenic 50.0%
CGGATCCAAATATGGGTGGA+TGG - Chr3:56224769-56224788 MsG0380014539.01.T01:CDS 50.0%
CTCGAGATCTTGCACGATCA+CGG + Chr3:56225088-56225107 None:intergenic 50.0%
CTGCTACCTTGAGTGGGATT+GGG - Chr3:56223725-56223744 MsG0380014539.01.T01:CDS 50.0%
GAAGAGGTAATTGGGGGAGA+GGG - Chr3:56224376-56224395 MsG0380014539.01.T01:CDS 50.0%
GAAGGCAGCATACCAGAGAA+CGG + Chr3:56224618-56224637 None:intergenic 50.0%
GACCATCCATACCTGATGGT+GGG + Chr3:56224731-56224750 None:intergenic 50.0%
GAGGACATGGTAATCCGATG+AGG - Chr3:56224421-56224440 MsG0380014539.01.T01:CDS 50.0%
GAGGTGAATCCTGATAGAGC+TGG - Chr3:56224870-56224889 MsG0380014539.01.T01:CDS 50.0%
GATGAGACAAGGTCAAGGTG+GGG - Chr3:56223855-56223874 MsG0380014539.01.T01:CDS 50.0%
GATGATCCCACCATCAGGTA+TGG - Chr3:56224722-56224741 MsG0380014539.01.T01:CDS 50.0%
GCTGGAAATGGATATGGACC+TGG - Chr3:56224486-56224505 MsG0380014539.01.T01:CDS 50.0%
GGGAATGAAGTGGGTGTTCA+AGG - Chr3:56223670-56223689 MsG0380014539.01.T01:CDS 50.0%
GGTAACTACCAAGGTGGAGA+TGG - Chr3:56224297-56224316 MsG0380014539.01.T01:CDS 50.0%
GTGTTCAAGGAGGTGGGATT+AGG - Chr3:56223683-56223702 MsG0380014539.01.T01:CDS 50.0%
TCCGGCCACATTCCCATATT+AGG + Chr3:56224753-56224772 None:intergenic 50.0%
TGCAGAGTCAAGTTATGGGG+AGG - Chr3:56224821-56224840 MsG0380014539.01.T01:CDS 50.0%
TGCTACCTTGAGTGGGATTG+GGG - Chr3:56223726-56223745 MsG0380014539.01.T01:CDS 50.0%
TTAGGCCAACCAGCTCTATC+AGG + Chr3:56224882-56224901 None:intergenic 50.0%
TTCGGCCATGAAACCATCGT+CGG + Chr3:56223434-56223453 None:intergenic 50.0%
TTGAGTGGGATTGGGGAACA+GGG - Chr3:56223733-56223752 MsG0380014539.01.T01:CDS 50.0%
! ATACTGGTGTTGGGTTGCAG+GGG - Chr3:56223761-56223780 MsG0380014539.01.T01:CDS 50.0%
! CCTTCATTTGGTGGTCCCAT+TGG - Chr3:56224549-56224568 MsG0380014539.01.T01:CDS 50.0%
! GATACTGGTGTTGGGTTGCA+GGG - Chr3:56223760-56223779 MsG0380014539.01.T01:CDS 50.0%
! GTTGGGTTGCAGGGGATTAT+TGG - Chr3:56223769-56223788 MsG0380014539.01.T01:CDS 50.0%
! TGATACTGGTGTTGGGTTGC+AGG - Chr3:56223759-56223778 MsG0380014539.01.T01:CDS 50.0%
!! GGGTTGATGAGACAAGGTCA+AGG - Chr3:56223850-56223869 MsG0380014539.01.T01:CDS 50.0%
!! GTTGGGGGTGTTGGAAATGA+TGG - Chr3:56223829-56223848 MsG0380014539.01.T01:CDS 50.0%
!! TATGGACCTGGTATTGGTGC+TGG - Chr3:56224498-56224517 MsG0380014539.01.T01:CDS 50.0%
!! TGATGAACTTGGTGGTGGCA+AGG - Chr3:56224797-56224816 MsG0380014539.01.T01:CDS 50.0%
!!! GTTGGGGTTGGTGGTTTTGT+TGG - Chr3:56223811-56223830 MsG0380014539.01.T01:CDS 50.0%
!!! TGGGGTTGGTGGTTTTGTTG+GGG - Chr3:56223813-56223832 MsG0380014539.01.T01:CDS 50.0%
AAACCACCAACCCCAACTGG+TGG + Chr3:56223808-56223827 None:intergenic 55.0%
AACCCGGATGCATCATAGGC+GGG + Chr3:56224524-56224543 None:intergenic 55.0%
ACAGCAGCAACCACCAGTTG+GGG - Chr3:56223795-56223814 MsG0380014539.01.T01:CDS 55.0%
ACCATGATCGTGACCGCGAA+AGG - Chr3:56225108-56225127 MsG0380014539.01.T01:CDS 55.0%
ACTCCATGCATACCAACGCC+AGG + Chr3:56224645-56224664 None:intergenic 55.0%
AGATGGGACGAGAACGGTCT+CGG - Chr3:56225060-56225079 MsG0380014539.01.T01:CDS 55.0%
AGGAATAGGGGAGGTGGGAT+GGG - Chr3:56224441-56224460 MsG0380014539.01.T01:CDS 55.0%
ATAGCCACCCACTCGACCAA+TGG + Chr3:56224568-56224587 None:intergenic 55.0%
CAACAGCAGCAACCACCAGT+TGG - Chr3:56223793-56223812 MsG0380014539.01.T01:CDS 55.0%
CAGGGTGGTGATACTGGTGT+TGG - Chr3:56223751-56223770 MsG0380014539.01.T01:CDS 55.0%
CATGAAACCATCGTCGGCGA+CGG + Chr3:56223428-56223447 None:intergenic 55.0%
CATGATCGTGACCGCGAAAG+GGG - Chr3:56225110-56225129 MsG0380014539.01.T01:CDS 55.0%
CCAAATATGGGTGGATGGGG+CGG - Chr3:56224774-56224793 MsG0380014539.01.T01:CDS 55.0%
CCACCTCCCCTATTCCTCAT+CGG + Chr3:56224438-56224457 None:intergenic 55.0%
CCATGATCGTGACCGCGAAA+GGG - Chr3:56225109-56225128 MsG0380014539.01.T01:CDS 55.0%
CGATGAGGAATAGGGGAGGT+GGG - Chr3:56224436-56224455 MsG0380014539.01.T01:CDS 55.0%
CGGATATAGCTTCGTTGCGG+TGG + Chr3:56223405-56223424 None:intergenic 55.0%
CGGCGGATATAGCTTCGTTG+CGG + Chr3:56223408-56223427 None:intergenic 55.0%
CTCCATGCATACCAACGCCA+GGG + Chr3:56224644-56224663 None:intergenic 55.0%
CTGTTCCCCAATCCCACTCA+AGG + Chr3:56223734-56223753 None:intergenic 55.0%
CTTGAGTGGGATTGGGGAAC+AGG - Chr3:56223732-56223751 MsG0380014539.01.T01:CDS 55.0%
GAAGTGGGTGTTCAAGGAGG+TGG - Chr3:56223676-56223695 MsG0380014539.01.T01:CDS 55.0%
GAGAGGGAACAATCCTGGGA+TGG - Chr3:56224392-56224411 MsG0380014539.01.T01:CDS 55.0%
GAGGGAACAATCCTGGGATG+GGG - Chr3:56224394-56224413 MsG0380014539.01.T01:CDS 55.0%
GCCGCATCTGACCATCAGTA+TGG - Chr3:56224846-56224865 MsG0380014539.01.T01:CDS 55.0%
GCTGCTACCTTGAGTGGGAT+TGG - Chr3:56223724-56223743 MsG0380014539.01.T01:CDS 55.0%
GGAAGAGGTAATTGGGGGAG+AGG - Chr3:56224375-56224394 MsG0380014539.01.T01:CDS 55.0%
GGACCATCCATACCTGATGG+TGG + Chr3:56224732-56224751 None:intergenic 55.0%
GGGACAGGTGGTAACTACCA+AGG - Chr3:56224288-56224307 MsG0380014539.01.T01:CDS 55.0%
GGGATGGGGAATAGAGGACA+TGG - Chr3:56224408-56224427 MsG0380014539.01.T01:CDS 55.0%
GGTATGCTGCCTTCATACCC+TGG - Chr3:56224624-56224643 MsG0380014539.01.T01:CDS 55.0%
TAGCCACCCACTCGACCAAT+GGG + Chr3:56224567-56224586 None:intergenic 55.0%
TGACAGGCACAGGGAAGACA+GGG - Chr3:56225154-56225173 MsG0380014539.01.T01:CDS 55.0%
TGGCCGGATCCAAATATGGG+TGG - Chr3:56224765-56224784 MsG0380014539.01.T01:CDS 55.0%
TGTCCTCTATTCCCCATCCC+AGG + Chr3:56224408-56224427 None:intergenic 55.0%
! AGGATCAGAGAGGGACTGGT+CGG - Chr3:56224923-56224942 MsG0380014539.01.T01:CDS 55.0%
! ATACCAGAGAACGGAGGCGT+TGG + Chr3:56224609-56224628 None:intergenic 55.0%
!! TACCAGAGAACGGAGGCGTT+GGG + Chr3:56224608-56224627 None:intergenic 55.0%
!! TACCCTGGCGTTGGTATGCA+TGG - Chr3:56224639-56224658 MsG0380014539.01.T01:CDS 55.0%
!!! GGGGTTGGTGGTTTTGTTGG+GGG - Chr3:56223814-56223833 MsG0380014539.01.T01:CDS 55.0%
!!! GGTGGTTTTGTTGGGGGTGT+TGG - Chr3:56223820-56223839 MsG0380014539.01.T01:CDS 55.0%
AATAGGGGAGGTGGGATGGG+TGG - Chr3:56224444-56224463 MsG0380014539.01.T01:CDS 60.0%
AGGGTGCAGGTGGGGTTTCT+GGG - Chr3:56223626-56223645 MsG0380014539.01.T01:CDS 60.0%
AGTGGGATTGGGGAACAGGG+TGG - Chr3:56223736-56223755 MsG0380014539.01.T01:CDS 60.0%
ATGGACGAAGACGGAGGGCA+CGG - Chr3:56223367-56223386 MsG0380014539.01.T01:CDS 60.0%
CAACCACCAGTTGGGGTTGG+TGG - Chr3:56223802-56223821 MsG0380014539.01.T01:CDS 60.0%
CAGCAACCACCAGTTGGGGT+TGG - Chr3:56223799-56223818 MsG0380014539.01.T01:CDS 60.0%
CCCTTTCGCGGTCACGATCA+TGG + Chr3:56225112-56225131 None:intergenic 60.0%
CCGATGAGGAATAGGGGAGG+TGG - Chr3:56224435-56224454 MsG0380014539.01.T01:CDS 60.0%
CCGCCCCATCCACCCATATT+TGG + Chr3:56224777-56224796 None:intergenic 60.0%
CGTCGCCGACGATGGTTTCA+TGG - Chr3:56223426-56223445 MsG0380014539.01.T01:CDS 60.0%
CTGCCTTCATACCCTGGCGT+TGG - Chr3:56224630-56224649 MsG0380014539.01.T01:CDS 60.0%
GAGGAATAGGGGAGGTGGGA+TGG - Chr3:56224440-56224459 MsG0380014539.01.T01:CDS 60.0%
GATGGGACGAGAACGGTCTC+GGG - Chr3:56225061-56225080 MsG0380014539.01.T01:CDS 60.0%
GGATGGGGCGGTGATGAACT+TGG - Chr3:56224786-56224805 MsG0380014539.01.T01:CDS 60.0%
GGCACGGCAGTTGGGTTCAT+CGG + Chr3:56224207-56224226 None:intergenic 60.0%
GGCAGCATACCAGAGAACGG+AGG + Chr3:56224615-56224634 None:intergenic 60.0%
GGGAGAGGGGACGATCTTCT+AGG - Chr3:56225234-56225253 MsG0380014539.01.T01:CDS 60.0%
GGGGAACAGGGTGGTGATAC+TGG - Chr3:56223745-56223764 MsG0380014539.01.T01:CDS 60.0%
GGGGGAGAGGGAACAATCCT+GGG - Chr3:56224388-56224407 MsG0380014539.01.T01:CDS 60.0%
GGTCCTCTCCTTCCCTGGTT+CGG + Chr3:56224228-56224247 None:intergenic 60.0%
GGTGGCTATGCAGGCTATCC+CGG - Chr3:56224579-56224598 MsG0380014539.01.T01:CDS 60.0%
GGTGGTCCCATTGGTCGAGT+GGG - Chr3:56224558-56224577 MsG0380014539.01.T01:CDS 60.0%
GTCCCAACGTTACCACCACC+CGG + Chr3:56224273-56224292 None:intergenic 60.0%
GTGACAGGCACAGGGAAGAC+AGG - Chr3:56225153-56225172 MsG0380014539.01.T01:CDS 60.0%
TGACAGCTCAGGGTGCAGGT+GGG - Chr3:56223617-56223636 MsG0380014539.01.T01:CDS 60.0%
TGAGGCTGGAGGGGTTAAGC+CGG - Chr3:56224251-56224270 MsG0380014539.01.T01:CDS 60.0%
TGGCCCGCCTATGATGCATC+CGG - Chr3:56224518-56224537 MsG0380014539.01.T01:CDS 60.0%
TGGGGCGGTGATGAACTTGG+TGG - Chr3:56224789-56224808 MsG0380014539.01.T01:CDS 60.0%
TGGGGGAGAGGGAACAATCC+TGG - Chr3:56224387-56224406 MsG0380014539.01.T01:CDS 60.0%
TGGTGGTCCCATTGGTCGAG+TGG - Chr3:56224557-56224576 MsG0380014539.01.T01:CDS 60.0%
TTAACCCCTCCAGCCTCAGC+AGG + Chr3:56224249-56224268 None:intergenic 60.0%
! AAGCCGGGTGGTGGTAACGT+TGG - Chr3:56224267-56224286 MsG0380014539.01.T01:CDS 60.0%
! AGCCGGGTGGTGGTAACGTT+GGG - Chr3:56224268-56224287 MsG0380014539.01.T01:CDS 60.0%
! CAAGGTCAAGGTGGGGGTGT+TGG - Chr3:56223862-56223881 MsG0380014539.01.T01:CDS 60.0%
! GGCGGTGATGAACTTGGTGG+TGG - Chr3:56224792-56224811 MsG0380014539.01.T01:CDS 60.0%
! GGTGGTAACGTTGGGACAGG+TGG - Chr3:56224276-56224295 MsG0380014539.01.T01:CDS 60.0%
! GGTGGTGGTAACGTTGGGAC+AGG - Chr3:56224273-56224292 MsG0380014539.01.T01:CDS 60.0%
!! GGATCAGAGAGGGACTGGTC+GGG - Chr3:56224924-56224943 MsG0380014539.01.T01:CDS 60.0%
!! GGGGTGTTGGTGGAGGAAGT+GGG - Chr3:56223875-56223894 MsG0380014539.01.T01:CDS 60.0%
!! GGGTGTTGGTGGAGGAAGTG+GGG - Chr3:56223876-56223895 MsG0380014539.01.T01:CDS 60.0%
!! GGTGTTGGTGGAGGAAGTGG+GGG - Chr3:56223877-56223896 MsG0380014539.01.T01:CDS 60.0%
!! TCTCCTTCCCTGGTTCGGCA+CGG + Chr3:56224223-56224242 None:intergenic 60.0%
ACCGTGAGCGTGACAGGCAC+AGG - Chr3:56225144-56225163 MsG0380014539.01.T01:CDS 65.0%
AGAGGACCTGCTGAGGCTGG+AGG - Chr3:56224240-56224259 MsG0380014539.01.T01:CDS 65.0%
AGCGTGACCGTGAGCGTGAC+AGG - Chr3:56225138-56225157 MsG0380014539.01.T01:CDS 65.0%
AGGACCTGCTGAGGCTGGAG+GGG - Chr3:56224242-56224261 MsG0380014539.01.T01:CDS 65.0%
AGGAGAGGACCTGCTGAGGC+TGG - Chr3:56224237-56224256 MsG0380014539.01.T01:CDS 65.0%
ATATCCGCCGTCGCCGACGA+TGG - Chr3:56223418-56223437 MsG0380014539.01.T01:CDS 65.0%
ATCGTGACCGCGAAAGGGGC+AGG - Chr3:56225114-56225133 MsG0380014539.01.T01:CDS 65.0%
CAGCAGGTCCTCTCCTTCCC+TGG + Chr3:56224233-56224252 None:intergenic 65.0%
CAGGGTGCAGGTGGGGTTTC+TGG - Chr3:56223625-56223644 MsG0380014539.01.T01:CDS 65.0%
CCAACTGCCGTGCCGAACCA+GGG - Chr3:56224213-56224232 MsG0380014539.01.T01:CDS 65.0%
CCCTGTGCCTGTCACGCTCA+CGG + Chr3:56225148-56225167 None:intergenic 65.0%
CCGTGAGCGTGACAGGCACA+GGG - Chr3:56225145-56225164 MsG0380014539.01.T01:CDS 65.0%
CCTGCACCCTGAGCTGTCAG+CGG + Chr3:56223616-56223635 None:intergenic 65.0%
CTGACAGCTCAGGGTGCAGG+TGG - Chr3:56223616-56223635 MsG0380014539.01.T01:CDS 65.0%
GAAACCATCGTCGGCGACGG+CGG + Chr3:56223425-56223444 None:intergenic 65.0%
GACAGCTCAGGGTGCAGGTG+GGG - Chr3:56223618-56223637 MsG0380014539.01.T01:CDS 65.0%
GAGGACCTGCTGAGGCTGGA+GGG - Chr3:56224241-56224260 MsG0380014539.01.T01:CDS 65.0%
GAGGCTGGAGGGGTTAAGCC+GGG - Chr3:56224252-56224271 MsG0380014539.01.T01:CDS 65.0%
GGAGGTGGGATGGGTGGTAG+AGG - Chr3:56224450-56224469 MsG0380014539.01.T01:CDS 65.0%
GGCCCGCCTATGATGCATCC+GGG - Chr3:56224519-56224538 MsG0380014539.01.T01:CDS 65.0%
GGCTATGCAGGCTATCCCGG+TGG - Chr3:56224582-56224601 MsG0380014539.01.T01:CDS 65.0%
GGGAAGGAGAGGACCTGCTG+AGG - Chr3:56224233-56224252 MsG0380014539.01.T01:CDS 65.0%
GGTCCCATTGGTCGAGTGGG+TGG - Chr3:56224561-56224580 MsG0380014539.01.T01:CDS 65.0%
GGTCGAGTGGGTGGCTATGC+AGG - Chr3:56224570-56224589 MsG0380014539.01.T01:CDS 65.0%
GTGCCGAACCAGGGAAGGAG+AGG - Chr3:56224222-56224241 MsG0380014539.01.T01:CDS 65.0%
TCGTGACCGCGAAAGGGGCA+GGG - Chr3:56225115-56225134 MsG0380014539.01.T01:CDS 65.0%
!! CAAGGTGGGGGTGTTGGTGG+AGG - Chr3:56223868-56223887 MsG0380014539.01.T01:CDS 65.0%
!! CCTGGTTCGGCACGGCAGTT+GGG + Chr3:56224215-56224234 None:intergenic 65.0%
!! GGGGGTGTTGGTGGAGGAAG+TGG - Chr3:56223874-56223893 MsG0380014539.01.T01:CDS 65.0%
!! GGTCAAGGTGGGGGTGTTGG+TGG - Chr3:56223865-56223884 MsG0380014539.01.T01:CDS 65.0%
ACCGCCACCGCTGACAGCTC+AGG - Chr3:56223606-56223625 MsG0380014539.01.T01:CDS 70.0%
CACGCTCCCTGCCCCTTTCG+CGG + Chr3:56225124-56225143 None:intergenic 70.0%
CCCAACTGCCGTGCCGAACC+AGG - Chr3:56224212-56224231 MsG0380014539.01.T01:CDS 70.0%
CCCTGAGCTGTCAGCGGTGG+CGG + Chr3:56223610-56223629 None:intergenic 70.0%
CCGCCACCGCTGACAGCTCA+GGG - Chr3:56223607-56223626 MsG0380014539.01.T01:CDS 70.0%
CCGCTGACAGCTCAGGGTGC+AGG - Chr3:56223613-56223632 MsG0380014539.01.T01:CDS 70.0%
CTGCCGTGCCGAACCAGGGA+AGG - Chr3:56224217-56224236 MsG0380014539.01.T01:CDS 70.0%
GCACCCTGAGCTGTCAGCGG+TGG + Chr3:56223613-56223632 None:intergenic 70.0%
GCTGGAGGGGTTAAGCCGGG+TGG - Chr3:56224255-56224274 MsG0380014539.01.T01:CDS 70.0%
GGAGGGGTTAAGCCGGGTGG+TGG - Chr3:56224258-56224277 MsG0380014539.01.T01:CDS 70.0%
GGCCCAACGCCTCCGTTCTC+TGG - Chr3:56224603-56224622 MsG0380014539.01.T01:CDS 70.0%
GGCGGGCCAGCACCAATACC+AGG + Chr3:56224507-56224526 None:intergenic 70.0%
! AGTGGCAACGGCGGTGGTGG+CGG + Chr3:56223577-56223596 None:intergenic 70.0%
! AGTGGGGGTGCAGGTGGTGG+TGG - Chr3:56223892-56223911 MsG0380014539.01.T01:CDS 70.0%
! GACGAAGACGGAGGGCACGG+TGG - Chr3:56223370-56223389 MsG0380014539.01.T01:CDS 70.0%
! GGAAGTGGGGGTGCAGGTGG+TGG - Chr3:56223889-56223908 MsG0380014539.01.T01:CDS 70.0%
! GGAGGAAGTGGGGGTGCAGG+TGG - Chr3:56223886-56223905 MsG0380014539.01.T01:CDS 70.0%
! GGTGGAGGAAGTGGGGGTGC+AGG - Chr3:56223883-56223902 MsG0380014539.01.T01:CDS 70.0%
! TGAGCTGTCAGCGGTGGCGG+TGG + Chr3:56223607-56223626 None:intergenic 70.0%
!! AACGGAGGCGTTGGGCCACC+GGG + Chr3:56224600-56224619 None:intergenic 70.0%
!! CCCTGGTTCGGCACGGCAGT+TGG + Chr3:56224216-56224235 None:intergenic 70.0%
!! GAACGGAGGCGTTGGGCCAC+CGG + Chr3:56224601-56224620 None:intergenic 70.0%
!! GGTGGTGGCGGCAGTGGCAA+CGG + Chr3:56223589-56223608 None:intergenic 70.0%
GGCAGTGGCAACGGCGGTGG+TGG + Chr3:56223580-56223599 None:intergenic 75.0%
! GCTGTCAGCGGTGGCGGTGG+TGG + Chr3:56223604-56223623 None:intergenic 75.0%
! GGTGGCGGCAGTGGCAACGG+CGG + Chr3:56223586-56223605 None:intergenic 75.0%
! GTCAGCGGTGGCGGTGGTGG+CGG + Chr3:56223601-56223620 None:intergenic 75.0%
!! GGGGGTGCAGGTGGTGGTGG+AGG - Chr3:56223895-56223914 MsG0380014539.01.T01:CDS 75.0%
! GGCGGCAGTGGCAACGGCGG+TGG + Chr3:56223583-56223602 None:intergenic 80.0%
!!! GGTGGCGGTGGTGGCGGCAG+TGG + Chr3:56223595-56223614 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 56223367 56225352 56223367 ID=MsG0380014539.01;Name=MsG0380014539.01
Chr3 mRNA 56223367 56225352 56223367 ID=MsG0380014539.01.T01;Parent=MsG0380014539.01;Name=MsG0380014539.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|661
Chr3 exon 56223367 56225352 56223367 ID=MsG0380014539.01.T01:exon:18430;Parent=MsG0380014539.01.T01
Chr3 CDS 56223367 56225352 56223367 ID=MsG0380014539.01.T01:cds;Parent=MsG0380014539.01.T01
Gene Sequence

>MsG0380014539.01.T01

ATGGACGAAGACGGAGGGCACGGTGGCGATCAATTCCACCGCAACGAAGCTATATCCGCCGTCGCCGACGATGGTTTCATGGCCGAAGAAGATGAAGATTACGAAGATCTTTACAACGATGTTAATGTTGGTGAGGGTTTTCGTCAATCTTTGCAAAAAAACGAGCTTTCAGAAGTTAAAATTGACGCCGTTGAAGAAAAGAAGCTTCCGCCACCACCGCCGTTGCCACTGCCGCCACCACCGCCACCGCTGACAGCTCAGGGTGCAGGTGGGGTTTCTGGGTTTCAGAATCAAGAGCTTATAGGGAATGAAGTGGGTGTTCAAGGAGGTGGGATTAGGGTTGAATTAGGGCAAAAAGCTGCTACCTTGAGTGGGATTGGGGAACAGGGTGGTGATACTGGTGTTGGGTTGCAGGGGATTATTGGGCAACAGCAGCAACCACCAGTTGGGGTTGGTGGTTTTGTTGGGGGTGTTGGAAATGATGGGTTGATGAGACAAGGTCAAGGTGGGGGTGTTGGTGGAGGAAGTGGGGGTGCAGGTGGTGGTGGAGGAAGTACTGTATTGTTTGTGGGTGATTTGCATTGGTGGACTACTGATGCTGATTTGGAAGCTGAGCTTTGTAAGTATGGACAAGTGAAGGAAGTGAGGTTTTTCGACGAGAAAGCTAGTGGGAAATCGAAAGGGTACTGTCAGGTTGAGTTTTATGACCCTTTAGCTACAACTGCTTGTAAGGAAGGGATGAATGGTCATTTATTTAATGGTAGGCCGTGTGTTGTATCTTATGCGAATCCTTATACTGTTAAGAAAATGGGAGAGGCTTTGAATAATAGGAATCAACCGATGAACCCAACTGCCGTGCCGAACCAGGGAAGGAGAGGACCTGCTGAGGCTGGAGGGGTTAAGCCGGGTGGTGGTAACGTTGGGACAGGTGGTAACTACCAAGGTGGAGATGGGAATAATAATAATAATAATAATAATAATAATTATAATAATAATAATAGAGGTAGTGGAAGAGGTAATTGGGGGAGAGGGAACAATCCTGGGATGGGGAATAGAGGACATGGTAATCCGATGAGGAATAGGGGAGGTGGGATGGGTGGTAGAGGTATGATTGGTAATGCTGGAAATGGATATGGACCTGGTATTGGTGCTGGCCCGCCTATGATGCATCCGGGTTTTGATCCTTCATTTGGTGGTCCCATTGGTCGAGTGGGTGGCTATGCAGGCTATCCCGGTGGCCCAACGCCTCCGTTCTCTGGTATGCTGCCTTCATACCCTGGCGTTGGTATGCATGGAGTAGCACCTCATGTTAATCCTGGCTTTTTTGGAAGAGGGATGCATATGAATGGTATAGGGATGATCCCACCATCAGGTATGGATGGTCCTAATATGGGAATGTGGCCGGATCCAAATATGGGTGGATGGGGCGGTGATGAACTTGGTGGTGGCAAGGTTGCAGAGTCAAGTTATGGGGAGGAAGCCGCATCTGACCATCAGTATGGTGAGGTGAATCCTGATAGAGCTGGTTGGCCTAATGCTATGAGAGAAAAAGATAGAGGATCAGAGAGGGACTGGTCGGGTACTTCTGAACGAAAGTTCAAGGATGATAGGGATCATGAATATGAGAGAGAAGCACCTAGAGAAAAAGACGTGGGACATGACCTTGAAGAAAGAAGGAATCGTGATGATAGAGAGATGGGACGAGAACGGTCTCGGGACCGTGATCGTGCAAGATCTCGAGACCATGATCGTGACCGCGAAAGGGGCAGGGAGCGTGACCGTGAGCGTGACAGGCACAGGGAAGACAGGGACAAGTTTGCTGATCATCATAGATACAAAGACCGTGACTCACCACATGATGATGAATGGGAGAGGGGACGATCTTCTAGGACTCGCAGCAAATCACGATTATCAACACATGAGGAGGAACATCATTCTAGAAAAGAATCTGATTATGGAAAGAGGAGGCGGCTTACCTCCGATTAA

Protein sequence

>MsG0380014539.01.T01

MDEDGGHGGDQFHRNEAISAVADDGFMAEEDEDYEDLYNDVNVGEGFRQSLQKNELSEVKIDAVEEKKLPPPPPLPLPPPPPPLTAQGAGGVSGFQNQELIGNEVGVQGGGIRVELGQKAATLSGIGEQGGDTGVGLQGIIGQQQQPPVGVGGFVGGVGNDGLMRQGQGGGVGGGSGGAGGGGGSTVLFVGDLHWWTTDADLEAELCKYGQVKEVRFFDEKASGKSKGYCQVEFYDPLATTACKEGMNGHLFNGRPCVVSYANPYTVKKMGEALNNRNQPMNPTAVPNQGRRGPAEAGGVKPGGGNVGTGGNYQGGDGNNNNNNNNNNYNNNNRGSGRGNWGRGNNPGMGNRGHGNPMRNRGGGMGGRGMIGNAGNGYGPGIGAGPPMMHPGFDPSFGGPIGRVGGYAGYPGGPTPPFSGMLPSYPGVGMHGVAPHVNPGFFGRGMHMNGIGMIPPSGMDGPNMGMWPDPNMGGWGGDELGGGKVAESSYGEEAASDHQYGEVNPDRAGWPNAMREKDRGSERDWSGTSERKFKDDRDHEYEREAPREKDVGHDLEERRNRDDREMGRERSRDRDRARSRDHDRDRERGRERDRERDRHREDRDKFADHHRYKDRDSPHDDEWERGRSSRTRSKSRLSTHEEEHHSRKESDYGKRRRLTSD*