Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021111.01.T01 | RHN61117.1 | 90.164 | 122 | 12 | 0 | 1 | 122 | 3 | 124 | 1.31E-72 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021111.01.T01 | A0A396IE67 | 90.164 | 122 | 12 | 0 | 1 | 122 | 3 | 124 | 6.25e-73 | 227 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048969.01 | MsG0480021111.01 | 0.850754 | 1.383650e-60 | 2.738528e-57 |
| MsG0180000017.01 | MsG0480021111.01 | 0.826446 | 2.700628e-54 | 2.533311e-51 |
| MsG0180000490.01 | MsG0480021111.01 | 0.806924 | 6.494005e-50 | 3.569052e-47 |
| MsG0180000491.01 | MsG0480021111.01 | 0.819671 | 1.027594e-52 | 7.959221e-50 |
| MsG0180001119.01 | MsG0480021111.01 | 0.810630 | 1.047576e-50 | 6.347123e-48 |
| MsG0180001591.01 | MsG0480021111.01 | 0.830600 | 2.680426e-55 | 2.837463e-52 |
| MsG0180001827.01 | MsG0480021111.01 | 0.802057 | 6.721233e-49 | 3.260592e-46 |
| MsG0180001907.01 | MsG0480021111.01 | 0.813693 | 2.249307e-51 | 1.479107e-48 |
| MsG0180002891.01 | MsG0480021111.01 | 0.852629 | 4.071212e-61 | 8.559047e-58 |
| MsG0180004164.01 | MsG0480021111.01 | 0.839307 | 1.713228e-57 | 2.356426e-54 |
| MsG0180004277.01 | MsG0480021111.01 | 0.847599 | 1.044556e-59 | 1.866198e-56 |
| MsG0180004988.01 | MsG0480021111.01 | 0.837561 | 4.835033e-57 | 6.304413e-54 |
| MsG0180005991.01 | MsG0480021111.01 | 0.823246 | 1.535701e-53 | 1.315098e-50 |
| MsG0280010584.01 | MsG0480021111.01 | 0.814739 | 1.321802e-51 | 8.941394e-49 |
| MsG0280010675.01 | MsG0480021111.01 | 0.825733 | 3.990683e-54 | 3.668251e-51 |
| MsG0280011222.01 | MsG0480021111.01 | 0.815608 | 8.474001e-52 | 5.870060e-49 |
| MsG0280011309.01 | MsG0480021111.01 | 0.834543 | 2.820314e-56 | 3.357700e-53 |
| MsG0380011662.01 | MsG0480021111.01 | 0.821356 | 4.217082e-53 | 3.423007e-50 |
| MsG0380012251.01 | MsG0480021111.01 | 0.847140 | 1.395914e-59 | 2.457914e-56 |
| MsG0380012583.01 | MsG0480021111.01 | 0.844461 | 7.452688e-59 | 1.204018e-55 |
| MsG0380013687.01 | MsG0480021111.01 | 0.812873 | 3.405998e-51 | 2.190406e-48 |
| MsG0380013813.01 | MsG0480021111.01 | 0.829013 | 6.528728e-55 | 6.598500e-52 |
| MsG0380014168.01 | MsG0480021111.01 | 0.832301 | 1.022256e-55 | 1.137804e-52 |
| MsG0380014169.01 | MsG0480021111.01 | 0.827909 | 1.205749e-54 | 1.180093e-51 |
| MsG0380014411.01 | MsG0480021111.01 | 0.813856 | 2.070537e-51 | 1.367546e-48 |
| MsG0380014510.01 | MsG0480021111.01 | 0.811143 | 8.112837e-51 | 4.982942e-48 |
| MsG0380014517.01 | MsG0480021111.01 | 0.812027 | 5.210783e-51 | 3.276391e-48 |
| MsG0380014530.01 | MsG0480021111.01 | 0.831566 | 1.552534e-55 | 1.691286e-52 |
| MsG0380014794.01 | MsG0480021111.01 | 0.863586 | 2.239643e-64 | 6.824460e-61 |
| MsG0480018910.01 | MsG0480021111.01 | 0.824332 | 8.546940e-54 | 7.547248e-51 |
| MsG0480019065.01 | MsG0480021111.01 | 0.845553 | 3.779199e-59 | 6.321206e-56 |
| MsG0480019693.01 | MsG0480021111.01 | 0.835986 | 1.218823e-56 | 1.515221e-53 |
| MsG0480020229.01 | MsG0480021111.01 | 0.848299 | 6.695026e-60 | 1.223199e-56 |
| MsG0480020433.01 | MsG0480021111.01 | 0.863948 | 1.728654e-64 | 5.334676e-61 |
| MsG0480021109.01 | MsG0480021111.01 | 0.945345 | 3.632630e-104 | 5.519807e-99 |
| MsG0480021111.01 | MsG0480021597.01 | 0.813307 | 2.735483e-51 | 1.780000e-48 |
| MsG0480021111.01 | MsG0480021789.01 | 0.823004 | 1.749283e-53 | 1.487908e-50 |
| MsG0480021111.01 | MsG0480021892.01 | 0.859698 | 3.455791e-63 | 9.207906e-60 |
| MsG0480021111.01 | MsG0480021895.01 | 0.813615 | 2.339810e-51 | 1.535399e-48 |
| MsG0480021111.01 | MsG0480021999.01 | 0.831769 | 1.383460e-55 | 1.516347e-52 |
| MsG0480021111.01 | MsG0480022150.01 | 0.801495 | 8.766908e-49 | 4.192823e-46 |
| MsG0480021111.01 | MsG0480022651.01 | 0.809210 | 2.118056e-50 | 1.236059e-47 |
| MsG0480021111.01 | MsG0480023148.01 | 0.810160 | 1.323447e-50 | 7.919405e-48 |
| MsG0480021111.01 | MsG0480023616.01 | 0.833466 | 5.248955e-56 | 6.049574e-53 |
| MsG0480021111.01 | MsG0480023907.01 | 0.819775 | 9.730786e-53 | 7.559273e-50 |
| MsG0480021111.01 | MsG0480023998.01 | 0.852275 | 5.135611e-61 | 1.067701e-57 |
| MsG0480021111.01 | MsG0580024820.01 | 0.829819 | 4.157340e-55 | 4.303431e-52 |
| MsG0480021111.01 | MsG0580025226.01 | 0.806129 | 9.556126e-50 | 5.146131e-47 |
| MsG0480021111.01 | MsG0580027348.01 | 0.825051 | 5.787465e-54 | 5.217683e-51 |
| MsG0480021111.01 | MsG0580028093.01 | 0.815164 | 1.063421e-51 | 7.276507e-49 |
| MsG0480021111.01 | MsG0580028177.01 | 0.830072 | 3.608796e-55 | 3.761821e-52 |
| MsG0480021111.01 | MsG0580028397.01 | 0.817968 | 2.503970e-52 | 1.850122e-49 |
| MsG0480021111.01 | MsG0580028719.01 | 0.809725 | 1.642069e-50 | 9.715144e-48 |
| MsG0480021111.01 | MsG0580029394.01 | 0.845974 | 2.905290e-59 | 4.926704e-56 |
| MsG0480021111.01 | MsG0580029433.01 | 0.817275 | 3.588347e-52 | 2.601452e-49 |
| MsG0480021111.01 | MsG0680031996.01 | 0.849660 | 2.803043e-60 | 5.352544e-57 |
| MsG0480021111.01 | MsG0680031997.01 | 0.821556 | 3.792907e-53 | 3.095923e-50 |
| MsG0480021111.01 | MsG0680031998.01 | 0.802636 | 5.107597e-49 | 2.514574e-46 |
| MsG0480021111.01 | MsG0680032000.01 | 0.850752 | 1.385806e-60 | 2.742595e-57 |
| MsG0480021111.01 | MsG0680032002.01 | 0.845312 | 4.392455e-59 | 7.290490e-56 |
| MsG0480021111.01 | MsG0680032003.01 | 0.846760 | 1.773944e-59 | 3.085402e-56 |
| MsG0480021111.01 | MsG0680032246.01 | 0.822866 | 1.883787e-53 | 1.596051e-50 |
| MsG0480021111.01 | MsG0680032257.01 | 0.806628 | 7.501149e-50 | 4.090936e-47 |
| MsG0480021111.01 | MsG0680032272.01 | 0.804970 | 1.672647e-49 | 8.743669e-47 |
| MsG0480021111.01 | MsG0680032274.01 | 0.852206 | 5.374774e-61 | 1.114870e-57 |
| MsG0480021111.01 | MsG0680032275.01 | 0.836048 | 1.175382e-56 | 1.463973e-53 |
| MsG0480021111.01 | MsG0680032279.01 | 0.800138 | 1.659117e-48 | 7.666676e-46 |
| MsG0480021111.01 | MsG0680032305.01 | 0.828829 | 7.231924e-55 | 7.270043e-52 |
| MsG0480021111.01 | MsG0680033049.01 | 0.802496 | 5.457936e-49 | 2.677467e-46 |
| MsG0480021111.01 | MsG0680033447.01 | 0.826338 | 2.865109e-54 | 2.679409e-51 |
| MsG0480021111.01 | MsG0680034028.01 | 0.809436 | 1.893768e-50 | 1.111833e-47 |
| MsG0480021111.01 | MsG0680034480.01 | 0.804697 | 1.907851e-49 | 9.902978e-47 |
| MsG0480021111.01 | MsG0680035831.01 | 0.822623 | 2.145573e-53 | 1.805503e-50 |
| MsG0480021111.01 | MsG0780036218.01 | 0.841342 | 5.037502e-58 | 7.379163e-55 |
| MsG0480021111.01 | MsG0780036509.01 | 0.850616 | 1.513360e-60 | 2.981648e-57 |
| MsG0480021111.01 | MsG0780036584.01 | 0.846966 | 1.558431e-59 | 2.728363e-56 |
| MsG0480021111.01 | MsG0780036613.01 | 0.800818 | 1.205464e-48 | 5.667300e-46 |
| MsG0480021111.01 | MsG0780037351.01 | 0.800711 | 1.267802e-48 | 5.943972e-46 |
| MsG0480021111.01 | MsG0780037679.01 | 0.825834 | 3.776136e-54 | 3.481036e-51 |
| MsG0480021111.01 | MsG0780038115.01 | 0.814351 | 1.610636e-51 | 1.078162e-48 |
| MsG0480021111.01 | MsG0780038334.01 | 0.842019 | 3.338348e-58 | 4.995214e-55 |
| MsG0480021111.01 | MsG0780038337.01 | 0.806404 | 8.364506e-50 | 4.535925e-47 |
| MsG0480021111.01 | MsG0780039256.01 | 0.844942 | 5.530923e-59 | 9.072288e-56 |
| MsG0480021111.01 | MsG0780039339.01 | 0.822627 | 2.141116e-53 | 1.801952e-50 |
| MsG0480021111.01 | MsG0780039795.01 | 0.810407 | 1.170802e-50 | 7.051305e-48 |
| MsG0480021111.01 | MsG0780040417.01 | 0.807541 | 4.805498e-50 | 2.683750e-47 |
| MsG0480021111.01 | MsG0780040700.01 | 0.800465 | 1.422925e-48 | 6.629863e-46 |
| MsG0480021111.01 | MsG0780040701.01 | 0.839865 | 1.226943e-57 | 1.716741e-54 |
| MsG0480021111.01 | MsG0780041588.01 | 0.808342 | 3.246089e-50 | 1.851481e-47 |
| MsG0480021111.01 | MsG0880041850.01 | 0.816878 | 4.406104e-52 | 3.160061e-49 |
| MsG0480021111.01 | MsG0880042084.01 | 0.801868 | 7.347314e-49 | 3.547383e-46 |
| MsG0480021111.01 | MsG0880042343.01 | 0.806657 | 7.396097e-50 | 4.036652e-47 |
| MsG0480021111.01 | MsG0880042922.01 | 0.817420 | 3.327694e-52 | 2.422343e-49 |
| MsG0480021111.01 | MsG0880043156.01 | 0.835593 | 1.532727e-56 | 1.882956e-53 |
| MsG0480021111.01 | MsG0880043913.01 | 0.811102 | 8.279341e-51 | 5.079821e-48 |
| MsG0480021111.01 | MsG0880044538.01 | 0.816971 | 4.200778e-52 | 3.020523e-49 |
| MsG0480021111.01 | MsG0880044620.01 | 0.808299 | 3.316368e-50 | 1.889319e-47 |
| MsG0480021111.01 | MsG0880044626.01 | 0.815965 | 7.055118e-52 | 4.934884e-49 |
| MsG0480021111.01 | MsG0880045150.01 | 0.816554 | 5.208725e-52 | 3.702435e-49 |
| MsG0480021111.01 | MsG0880045259.01 | 0.808962 | 2.393518e-50 | 1.387491e-47 |
| MsG0480021111.01 | MsG0880045377.01 | 0.825181 | 5.390835e-54 | 4.878307e-51 |
| MsG0480021111.01 | MsG0880045409.01 | 0.848673 | 5.277295e-60 | 9.758888e-57 |
| MsG0480021111.01 | MsG0880045423.01 | 0.852384 | 4.783452e-61 | 9.977977e-58 |
| MsG0480021111.01 | MsG0880045624.01 | 0.830169 | 3.416616e-55 | 3.571916e-52 |
| MsG0480021111.01 | MsG0880045899.01 | 0.801698 | 7.963728e-49 | 3.828115e-46 |
| MsG0480021111.01 | MsG0880045923.01 | 0.808513 | 2.985377e-50 | 1.710303e-47 |
| MsG0480021111.01 | MsG0880046025.01 | 0.807851 | 4.131263e-50 | 2.325816e-47 |
| MsG0480021111.01 | MsG0880046406.01 | 0.851677 | 7.595769e-61 | 1.549234e-57 |
| MsG0480021111.01 | MsG0880046573.01 | 0.819653 | 1.037299e-52 | 8.030383e-50 |
| MsG0480021111.01 | MsG0880046968.01 | 0.808315 | 3.290356e-50 | 1.875330e-47 |
| MsG0480021111.01 | MsG0880047112.01 | 0.803381 | 3.582536e-49 | 1.797597e-46 |
| MsG0380015486.01 | MsG0480021111.01 | 0.813521 | 2.453765e-51 | 1.606091e-48 |
| MsG0380015501.01 | MsG0480021111.01 | 0.835881 | 1.296166e-56 | 1.606218e-53 |
| MsG0380017056.01 | MsG0480021111.01 | 0.803124 | 4.048455e-49 | 2.018056e-46 |
| MsG0380017353.01 | MsG0480021111.01 | 0.802012 | 6.864364e-49 | 3.326196e-46 |
| MsG0480018232.01 | MsG0480021111.01 | 0.823405 | 1.409825e-53 | 1.212652e-50 |
| MsG0280006587.01 | MsG0480021111.01 | 0.840013 | 1.122843e-57 | 1.578684e-54 |
| MsG0280007036.01 | MsG0480021111.01 | 0.810773 | 9.755039e-51 | 5.933262e-48 |
| MsG0280007047.01 | MsG0480021111.01 | 0.816380 | 5.698246e-52 | 4.031261e-49 |
| MsG0280007755.01 | MsG0480021111.01 | 0.807938 | 3.958264e-50 | 2.233546e-47 |
| MsG0280008233.01 | MsG0480021111.01 | 0.800115 | 1.676782e-48 | 7.743603e-46 |
| MsG0280008939.01 | MsG0480021111.01 | 0.827074 | 1.911985e-54 | 1.826357e-51 |
| MsG0280009434.01 | MsG0480021111.01 | 0.808227 | 3.435839e-50 | 1.953707e-47 |
| MsG0280009520.01 | MsG0480021111.01 | 0.853866 | 1.800275e-61 | 3.945951e-58 |
| MsG0280009901.01 | MsG0480021111.01 | 0.823490 | 1.346505e-53 | 1.161141e-50 |
| MsG0280009960.01 | MsG0480021111.01 | 0.813814 | 2.115481e-51 | 1.395674e-48 |
| MsG0280010523.01 | MsG0480021111.01 | 0.835666 | 1.469297e-56 | 1.808977e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021111.01.T01 | MTR_4g066170 | 90.164 | 122 | 12 | 0 | 1 | 122 | 3 | 124 | 8.52e-73 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 30 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCTTAACTTTGGAATTT+AGG | 0.193046 | 4:-53621702 | MsG0480021111.01.T01:CDS |
| ACAACCTCCTTTGTTTCTTT+TGG | 0.222665 | 4:+53621947 | None:intergenic |
| AGAAACAAAGGAGGTTGTTT+AGG | 0.305076 | 4:-53621942 | MsG0480021111.01.T01:CDS |
| TTGTTCAAGATGAGACAATT+TGG | 0.358818 | 4:+53622042 | None:intergenic |
| CAAAGTTAAGAGTGACTTAC+CGG | 0.370974 | 4:+53621711 | None:intergenic |
| ATCCAACATGAAAACATGTT+TGG | 0.381038 | 4:+53621992 | None:intergenic |
| TGATGACATAACAGATTTGT+TGG | 0.393027 | 4:-53621776 | MsG0480021111.01.T01:CDS |
| CTTAACTTTGGAATTTAGGT+TGG | 0.397284 | 4:-53621698 | MsG0480021111.01.T01:CDS |
| GTTGGGTAAATCAATTCTCT+TGG | 0.421329 | 4:-53621758 | MsG0480021111.01.T01:CDS |
| TTAACTTTGGAATTTAGGTT+GGG | 0.425917 | 4:-53621697 | MsG0480021111.01.T01:CDS |
| GATGACATAACAGATTTGTT+GGG | 0.448090 | 4:-53621775 | MsG0480021111.01.T01:CDS |
| AAGCCATGTCTCCATGGTAT+TGG | 0.449477 | 4:-53622021 | MsG0480021111.01.T01:CDS |
| CGGTAAGTCACTCTTAACTT+TGG | 0.456895 | 4:-53621710 | MsG0480021111.01.T01:CDS |
| AACAAAGGAGGTTGTTTAGG+AGG | 0.475654 | 4:-53621939 | MsG0480021111.01.T01:CDS |
| GTTAGCTCCGAGCTAGATCC+CGG | 0.491907 | 4:-53621730 | MsG0480021111.01.T01:CDS |
| ATGTTTCAACCAACAGTTGG+AGG | 0.526379 | 4:-53621832 | MsG0480021111.01.T01:CDS |
| GAGAAAAGCCCTCCAACTGT+TGG | 0.528736 | 4:+53621823 | None:intergenic |
| TCAGAAATGGCTATAGAAAG+AGG | 0.531378 | 4:-53621802 | MsG0480021111.01.T01:CDS |
| TTTGGTTACTTCCAATACCA+TGG | 0.556225 | 4:+53622010 | None:intergenic |
| CTTCCAATACCATGGAGACA+TGG | 0.561407 | 4:+53622018 | None:intergenic |
| GTAATGTTTCAACCAACAGT+TGG | 0.572656 | 4:-53621835 | MsG0480021111.01.T01:CDS |
| TGACTTACCGGGATCTAGCT+CGG | 0.577812 | 4:+53621723 | None:intergenic |
| CAGAAATGGCTATAGAAAGA+GGG | 0.580132 | 4:-53621801 | MsG0480021111.01.T01:CDS |
| TTGAACAAGCCATGTCTCCA+TGG | 0.586444 | 4:-53622027 | MsG0480021111.01.T01:CDS |
| TGTTTCAACCAACAGTTGGA+GGG | 0.612746 | 4:-53621831 | MsG0480021111.01.T01:CDS |
| TCATAAACCAAAAGAAACAA+AGG | 0.629237 | 4:-53621954 | MsG0480021111.01.T01:CDS |
| AAAGTTAAGAGTGACTTACC+GGG | 0.662982 | 4:+53621712 | None:intergenic |
| TAAACCAAAAGAAACAAAGG+AGG | 0.689233 | 4:-53621951 | MsG0480021111.01.T01:CDS |
| TGTTGGTTGAAACATTACTG+TGG | 0.705092 | 4:+53621840 | None:intergenic |
| GTGCAGCAAAATCAAAGCTG+TGG | 0.713390 | 4:-53621911 | MsG0480021111.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TCATAAACCAAAAGAAACAA+AGG | - | Chr4:53621793-53621812 | MsG0480021111.01.T01:CDS | 25.0% |
| !!! | TTAACTTTGGAATTTAGGTT+GGG | - | Chr4:53622050-53622069 | MsG0480021111.01.T01:CDS | 25.0% |
| !!! | TTCTTTTGGTTTATGAACAA+AGG | + | Chr4:53621789-53621808 | None:intergenic | 25.0% |
| ATCCAACATGAAAACATGTT+TGG | + | Chr4:53621758-53621777 | None:intergenic | 30.0% | |
| TAAACCAAAAGAAACAAAGG+AGG | - | Chr4:53621796-53621815 | MsG0480021111.01.T01:CDS | 30.0% | |
| TGATGACATAACAGATTTGT+TGG | - | Chr4:53621971-53621990 | MsG0480021111.01.T01:CDS | 30.0% | |
| TTGTTCAAGATGAGACAATT+TGG | + | Chr4:53621708-53621727 | None:intergenic | 30.0% | |
| ! | AACCAAACATGTTTTCATGT+TGG | - | Chr4:53621753-53621772 | MsG0480021111.01.T01:CDS | 30.0% |
| ! | GATGACATAACAGATTTGTT+GGG | - | Chr4:53621972-53621991 | MsG0480021111.01.T01:CDS | 30.0% |
| !! | CACTCTTAACTTTGGAATTT+AGG | - | Chr4:53622045-53622064 | MsG0480021111.01.T01:CDS | 30.0% |
| !! | CTTAACTTTGGAATTTAGGT+TGG | - | Chr4:53622049-53622068 | MsG0480021111.01.T01:CDS | 30.0% |
| AAAGTTAAGAGTGACTTACC+GGG | + | Chr4:53622038-53622057 | None:intergenic | 35.0% | |
| AGAAACAAAGGAGGTTGTTT+AGG | - | Chr4:53621805-53621824 | MsG0480021111.01.T01:CDS | 35.0% | |
| CAAAGTTAAGAGTGACTTAC+CGG | + | Chr4:53622039-53622058 | None:intergenic | 35.0% | |
| CAGAAATGGCTATAGAAAGA+GGG | - | Chr4:53621946-53621965 | MsG0480021111.01.T01:CDS | 35.0% | |
| GTAATGTTTCAACCAACAGT+TGG | - | Chr4:53621912-53621931 | MsG0480021111.01.T01:CDS | 35.0% | |
| GTTGGGTAAATCAATTCTCT+TGG | - | Chr4:53621989-53622008 | MsG0480021111.01.T01:CDS | 35.0% | |
| TCAGAAATGGCTATAGAAAG+AGG | - | Chr4:53621945-53621964 | MsG0480021111.01.T01:CDS | 35.0% | |
| TTTGGTTACTTCCAATACCA+TGG | + | Chr4:53621740-53621759 | None:intergenic | 35.0% | |
| ! | TGTTGGTTGAAACATTACTG+TGG | + | Chr4:53621910-53621929 | None:intergenic | 35.0% |
| !! | ACAACCTCCTTTGTTTCTTT+TGG | + | Chr4:53621803-53621822 | None:intergenic | 35.0% |
| AACAAAGGAGGTTGTTTAGG+AGG | - | Chr4:53621808-53621827 | MsG0480021111.01.T01:CDS | 40.0% | |
| ATGTTTCAACCAACAGTTGG+AGG | - | Chr4:53621915-53621934 | MsG0480021111.01.T01:CDS | 40.0% | |
| CGGTAAGTCACTCTTAACTT+TGG | - | Chr4:53622037-53622056 | MsG0480021111.01.T01:CDS | 40.0% | |
| TGTTTCAACCAACAGTTGGA+GGG | - | Chr4:53621916-53621935 | MsG0480021111.01.T01:CDS | 40.0% | |
| ! | GTTTTCATGTTGGATCGTCA+AGG | - | Chr4:53621763-53621782 | MsG0480021111.01.T01:CDS | 40.0% |
| AAGCCATGTCTCCATGGTAT+TGG | - | Chr4:53621726-53621745 | MsG0480021111.01.T01:CDS | 45.0% | |
| CTTCCAATACCATGGAGACA+TGG | + | Chr4:53621732-53621751 | None:intergenic | 45.0% | |
| GTGCAGCAAAATCAAAGCTG+TGG | - | Chr4:53621836-53621855 | MsG0480021111.01.T01:CDS | 45.0% | |
| TTGAACAAGCCATGTCTCCA+TGG | - | Chr4:53621720-53621739 | MsG0480021111.01.T01:CDS | 45.0% | |
| ! | TGGAGGGCTTTTCTCAGAAA+TGG | - | Chr4:53621932-53621951 | MsG0480021111.01.T01:CDS | 45.0% |
| GAGAAAAGCCCTCCAACTGT+TGG | + | Chr4:53621927-53621946 | None:intergenic | 50.0% | |
| TGACTTACCGGGATCTAGCT+CGG | + | Chr4:53622027-53622046 | None:intergenic | 50.0% | |
| GTTAGCTCCGAGCTAGATCC+CGG | - | Chr4:53622017-53622036 | MsG0480021111.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 53621684 | 53622085 | 53621684 | ID=MsG0480021111.01;Name=MsG0480021111.01 |
| Chr4 | mRNA | 53621684 | 53622085 | 53621684 | ID=MsG0480021111.01.T01;Parent=MsG0480021111.01;Name=MsG0480021111.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|133 |
| Chr4 | exon | 53621684 | 53622085 | 53621684 | ID=MsG0480021111.01.T01:exon:28700;Parent=MsG0480021111.01.T01 |
| Chr4 | CDS | 53621684 | 53622085 | 53621684 | ID=MsG0480021111.01.T01:cds;Parent=MsG0480021111.01.T01 |
| Gene Sequence |
| Protein sequence |
