Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011222.01.T01 | XP_013444711.1 | 61.538 | 143 | 28 | 1 | 26 | 168 | 229 | 344 | 9.63E-44 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011222.01.T01 | Q99142 | 43.357 | 143 | 49 | 2 | 30 | 167 | 142 | 257 | 3.61E-23 | 95.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011222.01.T01 | A0A072TNE8 | 61.538 | 143 | 28 | 1 | 26 | 168 | 229 | 344 | 4.60e-44 | 160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048274.01 | MsG0280011222.01 | 0.803201 | 3.902596e-49 | 1.949239e-46 |
| MsG0080048969.01 | MsG0280011222.01 | 0.839773 | 1.296918e-57 | 1.809466e-54 |
| MsG0180000017.01 | MsG0280011222.01 | 0.814265 | 1.682330e-51 | 1.123553e-48 |
| MsG0180000489.01 | MsG0280011222.01 | 0.842925 | 1.919991e-58 | 2.955370e-55 |
| MsG0180000490.01 | MsG0280011222.01 | 0.838127 | 3.457639e-57 | 4.587044e-54 |
| MsG0180000491.01 | MsG0280011222.01 | 0.856241 | 3.674994e-62 | 8.713382e-59 |
| MsG0180001907.01 | MsG0280011222.01 | 0.829819 | 4.159154e-55 | 4.305211e-52 |
| MsG0180002891.01 | MsG0280011222.01 | 0.871386 | 7.112263e-67 | 2.863690e-63 |
| MsG0180003503.01 | MsG0280011222.01 | 0.807328 | 5.334727e-50 | 2.962908e-47 |
| MsG0180004782.01 | MsG0280011222.01 | 0.801279 | 9.704065e-49 | 4.615887e-46 |
| MsG0180004988.01 | MsG0280011222.01 | 0.827441 | 1.562228e-54 | 1.508401e-51 |
| MsG0180005283.01 | MsG0280011222.01 | 0.805077 | 1.588932e-49 | 8.328647e-47 |
| MsG0180005416.01 | MsG0280011222.01 | 0.844812 | 5.996943e-59 | 9.796488e-56 |
| MsG0180005561.01 | MsG0280011222.01 | 0.829793 | 4.220034e-55 | 4.364726e-52 |
| MsG0180005991.01 | MsG0280011222.01 | 0.845502 | 3.902716e-59 | 6.517029e-56 |
| MsG0180006239.01 | MsG0280011222.01 | 0.827288 | 1.699928e-54 | 1.634016e-51 |
| MsG0280010584.01 | MsG0280011222.01 | 0.837929 | 3.887853e-57 | 5.127265e-54 |
| MsG0280010888.01 | MsG0280011222.01 | -0.805882 | 1.077276e-49 | 5.764815e-47 |
| MsG0280010905.01 | MsG0280011222.01 | 0.804937 | 1.699586e-49 | 8.877339e-47 |
| MsG0280011110.01 | MsG0280011222.01 | -0.845677 | 3.498646e-59 | 5.876058e-56 |
| MsG0280011222.01 | MsG0280011309.01 | 0.830768 | 2.437699e-55 | 2.593451e-52 |
| MsG0280011222.01 | MsG0280011372.01 | 0.820980 | 5.149501e-53 | 4.136787e-50 |
| MsG0280011222.01 | MsG0380011662.01 | 0.829896 | 3.982513e-55 | 4.131129e-52 |
| MsG0280011222.01 | MsG0380012251.01 | 0.840973 | 6.297861e-58 | 9.120626e-55 |
| MsG0280011222.01 | MsG0380012583.01 | 0.830060 | 3.632939e-55 | 3.785787e-52 |
| MsG0280011222.01 | MsG0380013373.01 | 0.830983 | 2.159460e-55 | 2.312030e-52 |
| MsG0280011222.01 | MsG0380014144.01 | 0.828127 | 1.068169e-54 | 1.052191e-51 |
| MsG0280011222.01 | MsG0380014517.01 | 0.805284 | 1.437652e-49 | 7.575777e-47 |
| MsG0280011222.01 | MsG0380014530.01 | 0.813267 | 2.790855e-51 | 1.814017e-48 |
| MsG0280011222.01 | MsG0380014794.01 | 0.827650 | 1.391576e-54 | 1.351643e-51 |
| MsG0280011222.01 | MsG0380015349.01 | -0.802338 | 5.881282e-49 | 2.873757e-46 |
| MsG0280011222.01 | MsG0380015501.01 | 0.809945 | 1.472352e-50 | 8.761255e-48 |
| MsG0280011222.01 | MsG0380016151.01 | 0.854975 | 8.600012e-62 | 1.955111e-58 |
| MsG0280011222.01 | MsG0380016545.01 | 0.808018 | 3.805836e-50 | 2.152141e-47 |
| MsG0280011222.01 | MsG0380017353.01 | 0.828136 | 1.062862e-54 | 1.047231e-51 |
| MsG0280011222.01 | MsG0480018098.01 | 0.814268 | 1.680175e-51 | 1.122208e-48 |
| MsG0280011222.01 | MsG0480018100.01 | 0.821529 | 3.847058e-53 | 3.137674e-50 |
| MsG0280011222.01 | MsG0480018101.01 | 0.811466 | 6.902219e-51 | 4.275761e-48 |
| MsG0280011222.01 | MsG0480018226.01 | 0.801745 | 7.788152e-49 | 3.748225e-46 |
| MsG0280011222.01 | MsG0480018323.01 | 0.823529 | 1.318833e-53 | 1.138473e-50 |
| MsG0280011222.01 | MsG0480018670.01 | 0.804608 | 1.990844e-49 | 1.030986e-46 |
| MsG0280011222.01 | MsG0480018910.01 | 0.832604 | 8.598000e-56 | 9.657793e-53 |
| MsG0280011222.01 | MsG0480019604.01 | 0.815326 | 9.792130e-52 | 6.730340e-49 |
| MsG0280011222.01 | MsG0480019693.01 | 0.834497 | 2.896360e-56 | 3.443376e-53 |
| MsG0280011222.01 | MsG0480019974.01 | 0.822466 | 2.333598e-53 | 1.954793e-50 |
| MsG0280011222.01 | MsG0480020229.01 | 0.846092 | 2.698192e-59 | 4.592445e-56 |
| MsG0280011222.01 | MsG0480020433.01 | 0.823428 | 1.392293e-53 | 1.198423e-50 |
| MsG0280011222.01 | MsG0480021109.01 | 0.811981 | 5.332639e-51 | 3.348872e-48 |
| MsG0280011222.01 | MsG0480021111.01 | 0.815608 | 8.474001e-52 | 5.870060e-49 |
| MsG0280011222.01 | MsG0480021892.01 | 0.806629 | 7.498307e-50 | 4.089489e-47 |
| MsG0280011222.01 | MsG0480021999.01 | 0.870184 | 1.767770e-66 | 6.814117e-63 |
| MsG0280011222.01 | MsG0480022002.01 | 0.841377 | 4.931397e-58 | 7.232525e-55 |
| MsG0280011222.01 | MsG0480022161.01 | 0.809905 | 1.502059e-50 | 8.928651e-48 |
| MsG0280011222.01 | MsG0480022664.01 | 0.826017 | 3.417137e-54 | 3.166559e-51 |
| MsG0280011222.01 | MsG0480022989.01 | 0.800875 | 1.173624e-48 | 5.525915e-46 |
| MsG0280011222.01 | MsG0480023148.01 | 0.818335 | 2.068670e-52 | 1.544099e-49 |
| MsG0280011222.01 | MsG0480023166.01 | 0.803378 | 3.587108e-49 | 1.799771e-46 |
| MsG0280011222.01 | MsG0480023169.01 | 0.801541 | 8.577846e-49 | 4.107058e-46 |
| MsG0280011222.01 | MsG0480023498.01 | 0.824207 | 9.148270e-54 | 8.049803e-51 |
| MsG0280011222.01 | MsG0480023616.01 | 0.803689 | 3.092657e-49 | 1.564177e-46 |
| MsG0280011222.01 | MsG0480023821.01 | 0.828383 | 9.267382e-55 | 9.197108e-52 |
| MsG0280011222.01 | MsG0480023998.01 | 0.833995 | 3.870538e-56 | 4.532777e-53 |
| MsG0280011222.01 | MsG0580024766.01 | 0.801570 | 8.459574e-49 | 4.053433e-46 |
| MsG0280011222.01 | MsG0580024820.01 | 0.811297 | 7.513656e-51 | 4.633455e-48 |
| MsG0280011222.01 | MsG0580025226.01 | 0.855152 | 7.640325e-62 | 1.747086e-58 |
| MsG0280011222.01 | MsG0580025301.01 | 0.805985 | 1.024834e-49 | 5.498852e-47 |
| MsG0280011222.01 | MsG0580025373.01 | 0.800683 | 1.284877e-48 | 6.019894e-46 |
| MsG0280011222.01 | MsG0580026050.01 | 0.810645 | 1.039653e-50 | 6.301661e-48 |
| MsG0280011222.01 | MsG0580026291.01 | 0.808169 | 3.534442e-50 | 2.006781e-47 |
| MsG0280011222.01 | MsG0580027348.01 | 0.836471 | 9.178133e-57 | 1.157830e-53 |
| MsG0280011222.01 | MsG0580028092.01 | 0.808365 | 3.209518e-50 | 1.831749e-47 |
| MsG0280011222.01 | MsG0580028093.01 | 0.849949 | 2.327985e-60 | 4.487676e-57 |
| MsG0280011222.01 | MsG0580028177.01 | 0.836878 | 7.228566e-57 | 9.231399e-54 |
| MsG0280011222.01 | MsG0580029394.01 | 0.800360 | 1.494782e-48 | 6.946580e-46 |
| MsG0280011222.01 | MsG0580029433.01 | 0.850291 | 1.867173e-60 | 3.639960e-57 |
| MsG0280011222.01 | MsG0580029480.01 | 0.815506 | 8.928733e-52 | 6.167619e-49 |
| MsG0280011222.01 | MsG0680031996.01 | 0.852149 | 5.577234e-61 | 1.154744e-57 |
| MsG0280011222.01 | MsG0680031997.01 | 0.831316 | 1.788916e-55 | 1.934223e-52 |
| MsG0280011222.01 | MsG0680032000.01 | 0.841346 | 5.023045e-58 | 7.359191e-55 |
| MsG0280011222.01 | MsG0680032002.01 | 0.869995 | 2.037248e-66 | 7.799745e-63 |
| MsG0280011222.01 | MsG0680032003.01 | 0.843822 | 1.106398e-58 | 1.752021e-55 |
| MsG0280011222.01 | MsG0680032191.01 | 0.810821 | 9.526534e-51 | 5.801598e-48 |
| MsG0280011222.01 | MsG0680032257.01 | 0.800376 | 1.483765e-48 | 6.898158e-46 |
| MsG0280011222.01 | MsG0680032274.01 | 0.817606 | 3.022046e-52 | 2.210938e-49 |
| MsG0280011222.01 | MsG0680033447.01 | 0.836468 | 9.192706e-57 | 1.159570e-53 |
| MsG0280011222.01 | MsG0780036105.01 | 0.800031 | 1.743743e-48 | 8.035889e-46 |
| MsG0280011222.01 | MsG0780036218.01 | 0.817732 | 2.830852e-52 | 2.078327e-49 |
| MsG0280011222.01 | MsG0780036509.01 | 0.838337 | 3.054013e-57 | 4.077733e-54 |
| MsG0280011222.01 | MsG0780036584.01 | 0.838524 | 2.733243e-57 | 3.670351e-54 |
| MsG0280011222.01 | MsG0780036613.01 | 0.811666 | 6.245900e-51 | 3.889328e-48 |
| MsG0280011222.01 | MsG0780036620.01 | 0.817697 | 2.883290e-52 | 2.114701e-49 |
| MsG0280011222.01 | MsG0780036881.01 | 0.808165 | 3.540999e-50 | 2.010269e-47 |
| MsG0280011222.01 | MsG0780037351.01 | 0.836037 | 1.183459e-56 | 1.473432e-53 |
| MsG0280011222.01 | MsG0780037453.01 | 0.812416 | 4.286426e-51 | 2.723940e-48 |
| MsG0280011222.01 | MsG0780037655.01 | 0.806975 | 6.335539e-50 | 3.486555e-47 |
| MsG0280011222.01 | MsG0780037679.01 | 0.802563 | 5.286044e-49 | 2.597551e-46 |
| MsG0280011222.01 | MsG0780039179.01 | 0.814177 | 1.759808e-51 | 1.172462e-48 |
| MsG0280011222.01 | MsG0780039256.01 | 0.820549 | 6.467833e-53 | 5.133409e-50 |
| MsG0280011222.01 | MsG0780039795.01 | 0.837175 | 6.069607e-57 | 7.820816e-54 |
| MsG0280011222.01 | MsG0780039805.01 | 0.823869 | 1.097879e-53 | 9.569545e-51 |
| MsG0280011222.01 | MsG0780039986.01 | 0.811479 | 6.858870e-51 | 4.250391e-48 |
| MsG0280011222.01 | MsG0780040154.01 | 0.813547 | 2.422414e-51 | 1.586680e-48 |
| MsG0280011222.01 | MsG0780040155.01 | 0.861275 | 1.150234e-63 | 3.236966e-60 |
| MsG0280011222.01 | MsG0780040175.01 | 0.838499 | 2.773800e-57 | 3.722049e-54 |
| MsG0280011222.01 | MsG0780040235.01 | 0.826015 | 3.419646e-54 | 3.168750e-51 |
| MsG0280011222.01 | MsG0780040319.01 | 0.825962 | 3.520862e-54 | 3.257620e-51 |
| MsG0280011222.01 | MsG0780040701.01 | 0.845283 | 4.473195e-59 | 7.417673e-56 |
| MsG0280011222.01 | MsG0780041129.01 | 0.833767 | 4.414859e-56 | 5.134731e-53 |
| MsG0280011222.01 | MsG0780041272.01 | 0.814496 | 1.496088e-51 | 1.005472e-48 |
| MsG0280011222.01 | MsG0780041588.01 | 0.842342 | 2.742555e-58 | 4.145991e-55 |
| MsG0280011222.01 | MsG0780041730.01 | 0.811497 | 6.798634e-51 | 4.215084e-48 |
| MsG0280011222.01 | MsG0780041778.01 | 0.819574 | 1.081218e-52 | 8.352374e-50 |
| MsG0280011222.01 | MsG0880041850.01 | 0.829725 | 4.384380e-55 | 4.525399e-52 |
| MsG0280011222.01 | MsG0880042416.01 | 0.804441 | 2.157453e-49 | 1.112443e-46 |
| MsG0280011222.01 | MsG0880043107.01 | 0.802570 | 5.270593e-49 | 2.590386e-46 |
| MsG0280011222.01 | MsG0880043156.01 | 0.827668 | 1.377789e-54 | 1.338982e-51 |
| MsG0280011222.01 | MsG0880043235.01 | 0.818941 | 1.507220e-52 | 1.144146e-49 |
| MsG0280011222.01 | MsG0880044410.01 | 0.817522 | 3.156364e-52 | 2.303984e-49 |
| MsG0280011222.01 | MsG0880044636.01 | 0.821487 | 3.934388e-53 | 3.205182e-50 |
| MsG0280011222.01 | MsG0880045031.01 | 0.815298 | 9.934005e-52 | 6.822542e-49 |
| MsG0280011222.01 | MsG0880045259.01 | 0.812089 | 5.053314e-51 | 3.182804e-48 |
| MsG0280011222.01 | MsG0880045377.01 | 0.841212 | 5.449331e-58 | 7.950103e-55 |
| MsG0280011222.01 | MsG0880045378.01 | 0.847158 | 1.380481e-59 | 2.431911e-56 |
| MsG0280011222.01 | MsG0880045402.01 | 0.820951 | 5.229179e-53 | 4.197382e-50 |
| MsG0280011222.01 | MsG0880045423.01 | 0.858742 | 6.684034e-63 | 1.723474e-59 |
| MsG0280011222.01 | MsG0880045624.01 | 0.835035 | 2.120929e-56 | 2.562219e-53 |
| MsG0280011222.01 | MsG0880045923.01 | 0.818521 | 1.876946e-52 | 1.408236e-49 |
| MsG0280011222.01 | MsG0880045929.01 | 0.803918 | 2.771226e-49 | 1.409994e-46 |
| MsG0280011222.01 | MsG0880046200.01 | 0.816899 | 4.358990e-52 | 3.127911e-49 |
| MsG0280011222.01 | MsG0880046406.01 | 0.811347 | 7.325220e-51 | 4.523246e-48 |
| MsG0280011222.01 | MsG0880046573.01 | 0.804486 | 2.110965e-49 | 1.089737e-46 |
| MsG0280011222.01 | MsG0880046574.01 | 0.810823 | 9.517727e-51 | 5.796490e-48 |
| MsG0280011222.01 | MsG0880046969.01 | 0.825318 | 5.003705e-54 | 4.545408e-51 |
| MsG0280011222.01 | MsG0880047112.01 | 0.867127 | 1.720681e-65 | 5.940582e-62 |
| MsG0280006587.01 | MsG0280011222.01 | 0.827738 | 1.325157e-54 | 1.290479e-51 |
| MsG0280006706.01 | MsG0280011222.01 | 0.837970 | 3.796259e-57 | 5.012948e-54 |
| MsG0280007561.01 | MsG0280011222.01 | 0.807035 | 6.151788e-50 | 3.390781e-47 |
| MsG0280009103.01 | MsG0280011222.01 | 0.803083 | 4.129371e-49 | 2.056152e-46 |
| MsG0280009434.01 | MsG0280011222.01 | 0.824035 | 1.003596e-53 | 8.787740e-51 |
| MsG0280009435.01 | MsG0280011222.01 | 0.808491 | 3.016867e-50 | 1.727400e-47 |
| MsG0280009436.01 | MsG0280011222.01 | 0.803545 | 3.312162e-49 | 1.669105e-46 |
| MsG0280009901.01 | MsG0280011222.01 | 0.816843 | 4.487045e-52 | 3.214944e-49 |
| MsG0280009960.01 | MsG0280011222.01 | 0.803717 | 3.051118e-49 | 1.544241e-46 |
| MsG0280010523.01 | MsG0280011222.01 | 0.817376 | 3.405403e-52 | 2.475859e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011222.01.T01 | MTR_8g028150 | 61.538 | 143 | 28 | 1 | 26 | 168 | 229 | 344 | 1.17e-47 | 160 |
| MsG0280011222.01.T01 | MTR_7g116890 | 45.833 | 144 | 46 | 2 | 30 | 168 | 229 | 345 | 4.10e-29 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 94 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTATATGCTTTGACTTT+TGG | 0.188890 | 2:+81152399 | MsG0280011222.01.T01:three_prime_UTR |
| TTTCAAAATCTAATCAATTA+TGG | 0.213890 | 2:-81152202 | None:intergenic |
| GTTGCCATCGCTTCCATTAC+TGG | 0.238359 | 2:-81150317 | None:intergenic |
| AAACCCAACGGCATTATTAT+AGG | 0.241535 | 2:+81152132 | MsG0280011222.01.T01:three_prime_UTR |
| TGCATTGACTGCCGAGAATT+TGG | 0.257432 | 2:+81151692 | MsG0280011222.01.T01:CDS |
| GTTGGTGTCTCTATGCTTGT+AGG | 0.275884 | 2:-81150060 | None:intergenic |
| GTTGGACCTGTACTTTCTTC+AGG | 0.296175 | 2:+81150888 | MsG0280011222.01.T01:CDS |
| GAGTCAAAATTATCTATAAT+TGG | 0.311166 | 2:-81152008 | None:intergenic |
| ACATAAAATTATTTATATCT+TGG | 0.318548 | 2:+81151795 | MsG0280011222.01.T01:exon |
| TTTATATCTTGGCATTTCAT+AGG | 0.327504 | 2:+81151806 | MsG0280011222.01.T01:three_prime_UTR |
| AACCCAACGGCATTATTATA+GGG | 0.336990 | 2:+81152133 | MsG0280011222.01.T01:three_prime_UTR |
| TTTGGAAGCGGCAGTCTCTT+TGG | 0.337449 | 2:-81150825 | None:intergenic |
| GCAACCAGTGCTGCAGAAAA+TGG | 0.342628 | 2:+81150866 | MsG0280011222.01.T01:CDS |
| TATATGTAGGTATGGCAAAA+TGG | 0.356098 | 2:+81152366 | MsG0280011222.01.T01:three_prime_UTR |
| CGCTTCCATTACTGGAAGTC+TGG | 0.357892 | 2:-81150309 | None:intergenic |
| CGAGAATTTGGTGCTGAAAT+CGG | 0.374258 | 2:+81151704 | MsG0280011222.01.T01:CDS |
| TGTGGAACACTGGTGGAAAT+AGG | 0.380405 | 2:-81150945 | None:intergenic |
| CGATTTCAGCACCAAATTCT+CGG | 0.384484 | 2:-81151703 | None:intergenic |
| ACAGGCTGAGGCTGAAGAAT+TGG | 0.391234 | 2:+81151656 | MsG0280011222.01.T01:intron |
| GCAGCAGCTGAGTTGAAATA+TGG | 0.399898 | 2:-81149717 | None:intergenic |
| TCGGCGAGAAACTTGATAGA+TGG | 0.401345 | 2:+81152328 | MsG0280011222.01.T01:three_prime_UTR |
| ACTGAAACAATGTAGATTGT+AGG | 0.403382 | 2:+81152226 | MsG0280011222.01.T01:three_prime_UTR |
| CTGAAACAATGTAGATTGTA+GGG | 0.421758 | 2:+81152227 | MsG0280011222.01.T01:three_prime_UTR |
| GCCTCCTGAAGCTTGGATGC+AGG | 0.426706 | 2:+81150983 | MsG0280011222.01.T01:CDS |
| AGGGCTACAGAGGAAGAAAA+TGG | 0.427836 | 2:+81152096 | MsG0280011222.01.T01:three_prime_UTR |
| GAAGCTGGAAAACACTCAAT+TGG | 0.435156 | 2:+81152035 | MsG0280011222.01.T01:three_prime_UTR |
| TACATATGAATATGTTATAC+TGG | 0.444536 | 2:+81149794 | MsG0280011222.01.T01:five_prime_UTR |
| GAGACACCAACTAAATCATC+TGG | 0.445527 | 2:+81150072 | MsG0280011222.01.T01:five_prime_UTR |
| AGCTGAAACGTGAGAGGAGG+AGG | 0.451832 | 2:+81151153 | MsG0280011222.01.T01:CDS |
| TTCAACTCAGCTGCTGCTCC+TGG | 0.457412 | 2:+81149723 | MsG0280011222.01.T01:five_prime_UTR |
| GCAGCGACGCGTCATATTGA+AGG | 0.458703 | 2:-81151960 | None:intergenic |
| GAAATCGGAAATGAATGAAT+TGG | 0.472002 | 2:+81151719 | MsG0280011222.01.T01:CDS |
| TTCAGGTATGACCACATCAC+TGG | 0.473232 | 2:+81150905 | MsG0280011222.01.T01:CDS |
| GAAGATCCAGGCTTAGGCTT+AGG | 0.474677 | 2:+81151200 | MsG0280011222.01.T01:CDS |
| ATCATCTGGAAACACTGATC+AGG | 0.488962 | 2:+81150086 | MsG0280011222.01.T01:five_prime_UTR |
| AGTACCTGCATCCAAGCTTC+AGG | 0.494330 | 2:-81150987 | None:intergenic |
| ACCAGTGTTCCACAGCCTTG+TGG | 0.495543 | 2:+81150954 | MsG0280011222.01.T01:CDS |
| GGAAGCGATGGCAACACTAC+AGG | 0.500726 | 2:+81150325 | MsG0280011222.01.T01:five_prime_UTR |
| GTGTTTCCAGATGATTTAGT+TGG | 0.505094 | 2:-81150078 | None:intergenic |
| AACCCTATAATAATGCCGTT+GGG | 0.507995 | 2:-81152135 | None:intergenic |
| AAAGAAATTCACTTATATGT+AGG | 0.508083 | 2:+81152353 | MsG0280011222.01.T01:three_prime_UTR |
| CAAAGCATGGACACAGACAC+TGG | 0.509651 | 2:+81151832 | MsG0280011222.01.T01:three_prime_UTR |
| CTGCTAGAAGATCCAGGCTT+AGG | 0.520262 | 2:+81151194 | MsG0280011222.01.T01:CDS |
| CGGCGAGAAACTTGATAGAT+GGG | 0.526999 | 2:+81152329 | MsG0280011222.01.T01:three_prime_UTR |
| TAACCCTATAATAATGCCGT+TGG | 0.527045 | 2:-81152136 | None:intergenic |
| AATTCACTTATATGTAGGTA+TGG | 0.527085 | 2:+81152358 | MsG0280011222.01.T01:three_prime_UTR |
| CTATTTAGTCAAATTATCAC+CGG | 0.529024 | 2:-81151877 | None:intergenic |
| GCTAGCGTGGAGAGGAAAAC+CGG | 0.540495 | 2:+81150135 | MsG0280011222.01.T01:five_prime_UTR |
| GGCAAAACTCCACAAGGCTG+TGG | 0.541143 | 2:-81150963 | None:intergenic |
| TTGCTTCCTAAGCCTAAGCC+TGG | 0.544129 | 2:-81151206 | None:intergenic |
| ATATGTACACAGAAATATCA+TGG | 0.546108 | 2:-81149778 | None:intergenic |
| AAAATCTAATCAATTATGGA+TGG | 0.550791 | 2:-81152198 | None:intergenic |
| GTGAATCTGCTAGAAGATCC+AGG | 0.554001 | 2:+81151188 | MsG0280011222.01.T01:CDS |
| TCCACAAGGCTGTGGAACAC+TGG | 0.554932 | 2:-81150955 | None:intergenic |
| TTGAAAGTGCTGAGCTAGCG+TGG | 0.561226 | 2:+81150122 | MsG0280011222.01.T01:five_prime_UTR |
| CCAGTGCTGCAGAAAATGGT+TGG | 0.563429 | 2:+81150870 | MsG0280011222.01.T01:CDS |
| GAAGCGATGGCAACACTACA+GGG | 0.570248 | 2:+81150326 | MsG0280011222.01.T01:five_prime_UTR |
| ATTTCATAGGCTACAAAGCA+TGG | 0.577216 | 2:+81151819 | MsG0280011222.01.T01:three_prime_UTR |
| GTGAGCTGAAACGTGAGAGG+AGG | 0.579172 | 2:+81151150 | MsG0280011222.01.T01:CDS |
| AACAATGTAGATTGTAGGGG+GGG | 0.582748 | 2:+81152231 | MsG0280011222.01.T01:three_prime_UTR |
| TTACTTGAACAGATGGAGAA+GGG | 0.588445 | 2:+81150774 | MsG0280011222.01.T01:intron |
| ATTACTTGAACAGATGGAGA+AGG | 0.590419 | 2:+81150773 | MsG0280011222.01.T01:intron |
| TGAAACAATGTAGATTGTAG+GGG | 0.592267 | 2:+81152228 | MsG0280011222.01.T01:three_prime_UTR |
| TGACCACATCACTGGAACTG+AGG | 0.592621 | 2:+81150913 | MsG0280011222.01.T01:CDS |
| ACAAGGCTGTGGAACACTGG+TGG | 0.593279 | 2:-81150952 | None:intergenic |
| TGTGAACGGCATTGACAAGA+GGG | 0.593449 | 2:+81152077 | MsG0280011222.01.T01:three_prime_UTR |
| ACTTCCAGTAATGGAAGCGA+TGG | 0.593651 | 2:+81150313 | MsG0280011222.01.T01:five_prime_UTR |
| TACAAATGTCAATGCCGTGC+TGG | 0.596419 | 2:+81151916 | MsG0280011222.01.T01:three_prime_UTR |
| GTTCCTCAGTTCCAGTGATG+TGG | 0.596954 | 2:-81150916 | None:intergenic |
| TATGAACATCATAGATGACC+AGG | 0.600855 | 2:-81149741 | None:intergenic |
| GAACAAACCTCAGTGATAGC+CGG | 0.601771 | 2:-81150154 | None:intergenic |
| GGGCTCCAGACTTCCAGTAA+TGG | 0.604188 | 2:+81150304 | MsG0280011222.01.T01:five_prime_UTR |
| ACACTGGTGGAAATAGGCGA+AGG | 0.605436 | 2:-81150939 | None:intergenic |
| CGACATTGACACATCATCAC+CGG | 0.607876 | 2:+81151858 | MsG0280011222.01.T01:three_prime_UTR |
| TATCAACAGTGTGGATACTG+AGG | 0.615133 | 2:+81150283 | MsG0280011222.01.T01:intron |
| GTCATACCTGAAGAAAGTAC+AGG | 0.620947 | 2:-81150894 | None:intergenic |
| AGAGTGAGCTGAAACGTGAG+AGG | 0.623183 | 2:+81151147 | MsG0280011222.01.T01:CDS |
| TTGTGAACGGCATTGACAAG+AGG | 0.625018 | 2:+81152076 | MsG0280011222.01.T01:three_prime_UTR |
| AGTGCTGAGCTAGCGTGGAG+AGG | 0.630683 | 2:+81150127 | MsG0280011222.01.T01:five_prime_UTR |
| CATTGACAAGAGGGCTACAG+AGG | 0.633228 | 2:+81152086 | MsG0280011222.01.T01:three_prime_UTR |
| ACCTGCATCCAAGCTTCAGG+AGG | 0.636392 | 2:-81150984 | None:intergenic |
| AAAGCATGGACACAGACACT+GGG | 0.645560 | 2:+81151833 | MsG0280011222.01.T01:three_prime_UTR |
| GAAACAATGTAGATTGTAGG+GGG | 0.647108 | 2:+81152229 | MsG0280011222.01.T01:three_prime_UTR |
| GCTGAGTTGAAATATGGTGG+TGG | 0.656136 | 2:-81149711 | None:intergenic |
| TTCTGTGAGAACAAACCCAA+CGG | 0.657855 | 2:+81152120 | MsG0280011222.01.T01:three_prime_UTR |
| TCAGGAGGCAAAACTCCACA+AGG | 0.658647 | 2:-81150969 | None:intergenic |
| ATCAACAGTGTGGATACTGA+GGG | 0.658895 | 2:+81150284 | MsG0280011222.01.T01:intron |
| ACAGAAGAGATAATTGTGAA+CGG | 0.661430 | 2:+81152063 | MsG0280011222.01.T01:three_prime_UTR |
| CACTGGTGGAAATAGGCGAA+GGG | 0.662789 | 2:-81150938 | None:intergenic |
| TCATGTGTCTGACACCAGCA+CGG | 0.677223 | 2:-81151930 | None:intergenic |
| AAACAATGTAGATTGTAGGG+GGG | 0.677791 | 2:+81152230 | MsG0280011222.01.T01:three_prime_UTR |
| GCAGCTGAGTTGAAATATGG+TGG | 0.711269 | 2:-81149714 | None:intergenic |
| AGGAAAACCGGCTATCACTG+AGG | 0.727206 | 2:+81150147 | MsG0280011222.01.T01:five_prime_UTR |
| AAGCGATGGCAACACTACAG+GGG | 0.742066 | 2:+81150327 | MsG0280011222.01.T01:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAAATTATTTATATCT+TGG | + | Chr2:81151795-81151814 | MsG0280011222.01.T01:exon | 10.0% |
| !!! | TTAATTACATTCAATTTTTT+TGG | + | Chr2:81150695-81150714 | MsG0280011222.01.T01:intron | 10.0% |
| !! | AAATCCATCATAATTATTTA+CGG | - | Chr2:81150010-81150029 | None:intergenic | 15.0% |
| !! | TTATAAATAAAGTACATAAC+CGG | - | Chr2:81150383-81150402 | None:intergenic | 15.0% |
| !! | TTTCAAAATCTAATCAATTA+TGG | - | Chr2:81152205-81152224 | None:intergenic | 15.0% |
| !!! | TTTAGAATCTAAAAATTGAT+CGG | + | Chr2:81152309-81152328 | MsG0280011222.01.T01:three_prime_UTR | 15.0% |
| !!! | TTTTAAAATTGTAATATCGT+AGG | - | Chr2:81152270-81152289 | None:intergenic | 15.0% |
| !! | AAAATCTAATCAATTATGGA+TGG | - | Chr2:81152201-81152220 | None:intergenic | 20.0% |
| !! | AAAGAAAATGTTATCACAAA+AGG | + | Chr2:81151601-81151620 | MsG0280011222.01.T01:intron | 20.0% |
| !! | AAAGAAATTCACTTATATGT+AGG | + | Chr2:81152353-81152372 | MsG0280011222.01.T01:three_prime_UTR | 20.0% |
| !! | AATACCGTAAATAATTATGA+TGG | + | Chr2:81150003-81150022 | MsG0280011222.01.T01:intron | 20.0% |
| !! | ATAAACAATACTAGTTATTC+TGG | + | Chr2:81150481-81150500 | MsG0280011222.01.T01:intron | 20.0% |
| !! | ATAATTATTTACGGTATTCA+GGG | - | Chr2:81150001-81150020 | None:intergenic | 20.0% |
| !! | GAGTCAAAATTATCTATAAT+TGG | - | Chr2:81152011-81152030 | None:intergenic | 20.0% |
| !! | GTACTTATGAATTATATTCA+AGG | + | Chr2:81149903-81149922 | MsG0280011222.01.T01:intron | 20.0% |
| !! | TAATCAGAAATTTAAAAGCA+TGG | - | Chr2:81150633-81150652 | None:intergenic | 20.0% |
| !! | TACATATGAATATGTTATAC+TGG | + | Chr2:81149794-81149813 | MsG0280011222.01.T01:five_prime_UTR | 20.0% |
| !! | TATAAATAAAGTACATAACC+GGG | - | Chr2:81150382-81150401 | None:intergenic | 20.0% |
| !! | TGAAAACAACTTATAGAATA+TGG | + | Chr2:81151442-81151461 | MsG0280011222.01.T01:intron | 20.0% |
| !!! | ATTATAGATAATTTTGACTC+AGG | + | Chr2:81152011-81152030 | MsG0280011222.01.T01:three_prime_UTR | 20.0% |
| !!! | ATTTTCATGCTTCAATTTTT+CGG | - | Chr2:81150410-81150429 | None:intergenic | 20.0% |
| !!! | TCAATTTTTTTGGTTTCATA+AGG | + | Chr2:81150705-81150724 | MsG0280011222.01.T01:intron | 20.0% |
| !!! | TTAAAAACCCTTCATTTTTT+CGG | + | Chr2:81152284-81152303 | MsG0280011222.01.T01:three_prime_UTR | 20.0% |
| ! | AATTCACTTATATGTAGGTA+TGG | + | Chr2:81152358-81152377 | MsG0280011222.01.T01:three_prime_UTR | 25.0% |
| ! | ATATAAACATTCAACCACAA+AGG | - | Chr2:81149881-81149900 | None:intergenic | 25.0% |
| ! | ATATGTACACAGAAATATCA+TGG | - | Chr2:81149781-81149800 | None:intergenic | 25.0% |
| ! | CATAATTATTTACGGTATTC+AGG | - | Chr2:81150002-81150021 | None:intergenic | 25.0% |
| ! | CTAAAATCCGAAAAAATGAA+GGG | - | Chr2:81152294-81152313 | None:intergenic | 25.0% |
| ! | CTATTTAGTCAAATTATCAC+CGG | - | Chr2:81151880-81151899 | None:intergenic | 25.0% |
| ! | TAATTATTTACGGTATTCAG+GGG | - | Chr2:81150000-81150019 | None:intergenic | 25.0% |
| ! | TCTGGATTACAAATATATTC+TGG | + | Chr2:81150499-81150518 | MsG0280011222.01.T01:intron | 25.0% |
| ! | TTTATATCTTGGCATTTCAT+AGG | + | Chr2:81151806-81151825 | MsG0280011222.01.T01:three_prime_UTR | 25.0% |
| !! | GTGATAACATTTTCTTTCAA+GGG | - | Chr2:81151598-81151617 | None:intergenic | 25.0% |
| !! | TCTAAAATCCGAAAAAATGA+AGG | - | Chr2:81152295-81152314 | None:intergenic | 25.0% |
| !! | TGTGATAACATTTTCTTTCA+AGG | - | Chr2:81151599-81151618 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+CGG | + | Chr2:81151551-81151570 | MsG0280011222.01.T01:intron | 25.0% |
| !! | TTTTCATGCTTCAATTTTTC+GGG | - | Chr2:81150409-81150428 | None:intergenic | 25.0% |
| !!! | TATTTGTCACGTGTTTTTAT+GGG | + | Chr2:81151280-81151299 | MsG0280011222.01.T01:CDS | 25.0% |
| !!! | TGGCTATTATAATTTTTTCC+CGG | + | Chr2:81150361-81150380 | MsG0280011222.01.T01:intron | 25.0% |
| !!! | TGTTTATATGCTTTGACTTT+TGG | + | Chr2:81152399-81152418 | MsG0280011222.01.T01:three_prime_UTR | 25.0% |
| !!! | TTATTTGTCACGTGTTTTTA+TGG | + | Chr2:81151279-81151298 | MsG0280011222.01.T01:CDS | 25.0% |
| AATAAGCTGAAAAGAGCTTA+TGG | - | Chr2:81151397-81151416 | None:intergenic | 30.0% | |
| ACAGAAGAGATAATTGTGAA+CGG | + | Chr2:81152063-81152082 | MsG0280011222.01.T01:three_prime_UTR | 30.0% | |
| ACTGAAACAATGTAGATTGT+AGG | + | Chr2:81152226-81152245 | MsG0280011222.01.T01:three_prime_UTR | 30.0% | |
| ACTGACACTAAAGTAATTCT+TGG | + | Chr2:81151106-81151125 | MsG0280011222.01.T01:intron | 30.0% | |
| AGTATTGTTTATCATACCAG+TGG | - | Chr2:81150473-81150492 | None:intergenic | 30.0% | |
| ATGATATCATATCAACAGTG+TGG | + | Chr2:81150274-81150293 | MsG0280011222.01.T01:intron | 30.0% | |
| ATGTAATTAACTCTCAAACG+AGG | - | Chr2:81150685-81150704 | None:intergenic | 30.0% | |
| CAATGTTATAAACAGACCAA+TGG | + | Chr2:81150436-81150455 | MsG0280011222.01.T01:intron | 30.0% | |
| CCAATTGTTAATGCATGATA+AGG | + | Chr2:81150599-81150618 | MsG0280011222.01.T01:intron | 30.0% | |
| CCTTATCATGCATTAACAAT+TGG | - | Chr2:81150602-81150621 | None:intergenic | 30.0% | |
| CTGAAACAATGTAGATTGTA+GGG | + | Chr2:81152227-81152246 | MsG0280011222.01.T01:three_prime_UTR | 30.0% | |
| GAAAAATCAAAACTTACAGC+AGG | - | Chr2:81149942-81149961 | None:intergenic | 30.0% | |
| GAAATCGGAAATGAATGAAT+TGG | + | Chr2:81151719-81151738 | MsG0280011222.01.T01:CDS | 30.0% | |
| GTACTAATTACTTGAACAGA+TGG | + | Chr2:81150767-81150786 | MsG0280011222.01.T01:intron | 30.0% | |
| TAAACACATATGAGACTGTT+CGG | + | Chr2:81151341-81151360 | MsG0280011222.01.T01:intron | 30.0% | |
| TATATGTAGGTATGGCAAAA+TGG | + | Chr2:81152366-81152385 | MsG0280011222.01.T01:three_prime_UTR | 30.0% | |
| TGAAACAATGTAGATTGTAG+GGG | + | Chr2:81152228-81152247 | MsG0280011222.01.T01:three_prime_UTR | 30.0% | |
| TTTAGTGTCAGTAAAAGACA+AGG | - | Chr2:81151098-81151117 | None:intergenic | 30.0% | |
| ! | CATTGGTCTGTTTATAACAT+TGG | - | Chr2:81150438-81150457 | None:intergenic | 30.0% |
| !! | AATTATGATGGATTTGACCT+GGG | + | Chr2:81150015-81150034 | MsG0280011222.01.T01:intron | 30.0% |
| !! | TAATTATGATGGATTTGACC+TGG | + | Chr2:81150014-81150033 | MsG0280011222.01.T01:intron | 30.0% |
| !! | TTTTATGGGTTTGTTTGGAT+TGG | + | Chr2:81151294-81151313 | MsG0280011222.01.T01:intron | 30.0% |
| AAACAATGTAGATTGTAGGG+GGG | + | Chr2:81152230-81152249 | MsG0280011222.01.T01:three_prime_UTR | 35.0% | |
| AAACCCAACGGCATTATTAT+AGG | + | Chr2:81152132-81152151 | MsG0280011222.01.T01:three_prime_UTR | 35.0% | |
| AAACTATCCTGAAGAGCTTA+TGG | - | Chr2:81151421-81151440 | None:intergenic | 35.0% | |
| AACATTCAACCACAAAGGTT+TGG | - | Chr2:81149876-81149895 | None:intergenic | 35.0% | |
| AACCCAACGGCATTATTATA+GGG | + | Chr2:81152133-81152152 | MsG0280011222.01.T01:three_prime_UTR | 35.0% | |
| AACCCTATAATAATGCCGTT+GGG | - | Chr2:81152138-81152157 | None:intergenic | 35.0% | |
| ACGTTCTTATCTCTCTATAC+AGG | + | Chr2:81151638-81151657 | MsG0280011222.01.T01:intron | 35.0% | |
| ATTACTTGAACAGATGGAGA+AGG | + | Chr2:81150773-81150792 | MsG0280011222.01.T01:intron | 35.0% | |
| ATTTCATAGGCTACAAAGCA+TGG | + | Chr2:81151819-81151838 | MsG0280011222.01.T01:three_prime_UTR | 35.0% | |
| CTTAATGTACCAAACCTTTG+TGG | + | Chr2:81149864-81149883 | MsG0280011222.01.T01:intron | 35.0% | |
| CTTATTTCCATAAGCTCTTC+AGG | + | Chr2:81151411-81151430 | MsG0280011222.01.T01:intron | 35.0% | |
| GAAACAATGTAGATTGTAGG+GGG | + | Chr2:81152229-81152248 | MsG0280011222.01.T01:three_prime_UTR | 35.0% | |
| GAATCATTTGATACCAAGAC+TGG | + | Chr2:81150657-81150676 | MsG0280011222.01.T01:intron | 35.0% | |
| GTGTTTCCAGATGATTTAGT+TGG | - | Chr2:81150081-81150100 | None:intergenic | 35.0% | |
| TAACCCTATAATAATGCCGT+TGG | - | Chr2:81152139-81152158 | None:intergenic | 35.0% | |
| TATGAACATCATAGATGACC+AGG | - | Chr2:81149744-81149763 | None:intergenic | 35.0% | |
| TCAATGAATTGTTGACACCA+CGG | - | Chr2:81150553-81150572 | None:intergenic | 35.0% | |
| TTACTTGAACAGATGGAGAA+GGG | + | Chr2:81150774-81150793 | MsG0280011222.01.T01:intron | 35.0% | |
| TTTATCATACCAGTGGTTGT+TGG | - | Chr2:81150466-81150485 | None:intergenic | 35.0% | |
| !! | ATTATGATGGATTTGACCTG+GGG | + | Chr2:81150016-81150035 | MsG0280011222.01.T01:intron | 35.0% |
| !! | CGTGTTTTTATGGGTTTGTT+TGG | + | Chr2:81151289-81151308 | MsG0280011222.01.T01:intron | 35.0% |
| AAACTTACAGCAGGTGAAGA+TGG | - | Chr2:81149933-81149952 | None:intergenic | 40.0% | |
| AACAATGTAGATTGTAGGGG+GGG | + | Chr2:81152231-81152250 | MsG0280011222.01.T01:three_prime_UTR | 40.0% | |
| ATCAACAGTGTGGATACTGA+GGG | + | Chr2:81150284-81150303 | MsG0280011222.01.T01:intron | 40.0% | |
| ATCATCTGGAAACACTGATC+AGG | + | Chr2:81150086-81150105 | MsG0280011222.01.T01:five_prime_UTR | 40.0% | |
| CGATTTCAGCACCAAATTCT+CGG | - | Chr2:81151706-81151725 | None:intergenic | 40.0% | |
| GAAGCTGGAAAACACTCAAT+TGG | + | Chr2:81152035-81152054 | MsG0280011222.01.T01:three_prime_UTR | 40.0% | |
| GAGACACCAACTAAATCATC+TGG | + | Chr2:81150072-81150091 | MsG0280011222.01.T01:five_prime_UTR | 40.0% | |
| TATCAACAGTGTGGATACTG+AGG | + | Chr2:81150283-81150302 | MsG0280011222.01.T01:intron | 40.0% | |
| TTATCTCTCTATACAGGCTG+AGG | + | Chr2:81151644-81151663 | MsG0280011222.01.T01:intron | 40.0% | |
| TTCAGCTCACTCTCATTCTA+AGG | - | Chr2:81151140-81151159 | None:intergenic | 40.0% | |
| TTCTGTGAGAACAAACCCAA+CGG | + | Chr2:81152120-81152139 | MsG0280011222.01.T01:three_prime_UTR | 40.0% | |
| ! | GATAACTGACACCGTCTTTT+TGG | - | Chr2:81150846-81150865 | None:intergenic | 40.0% |
| ! | GATAGGAATGCAGTTGATTC+TGG | - | Chr2:81150193-81150212 | None:intergenic | 40.0% |
| ! | GTCATACCTGAAGAAAGTAC+AGG | - | Chr2:81150897-81150916 | None:intergenic | 40.0% |
| !! | CGAGAATTTGGTGCTGAAAT+CGG | + | Chr2:81151704-81151723 | MsG0280011222.01.T01:CDS | 40.0% |
| !! | TACGAGTTTGTTGCTCTGTT+AGG | + | Chr2:81150223-81150242 | MsG0280011222.01.T01:intron | 40.0% |
| !! | TTATGATGGATTTGACCTGG+GGG | + | Chr2:81150017-81150036 | MsG0280011222.01.T01:intron | 40.0% |
| !!! | AATTTTGACTCAGGAGAAGC+TGG | + | Chr2:81152020-81152039 | MsG0280011222.01.T01:three_prime_UTR | 40.0% |
| AAAGCATGGACACAGACACT+GGG | + | Chr2:81151833-81151852 | MsG0280011222.01.T01:three_prime_UTR | 45.0% | |
| AATGGAACACCAACAACCAC+TGG | + | Chr2:81150454-81150473 | MsG0280011222.01.T01:intron | 45.0% | |
| ACTCGTAGAGCAAGGAAGAT+AGG | - | Chr2:81150210-81150229 | None:intergenic | 45.0% | |
| AGCAACAAACTCGTAGAGCA+AGG | - | Chr2:81150218-81150237 | None:intergenic | 45.0% | |
| AGGGCTACAGAGGAAGAAAA+TGG | + | Chr2:81152096-81152115 | MsG0280011222.01.T01:three_prime_UTR | 45.0% | |
| CAGGGGATGATGTAAAGCTT+CGG | - | Chr2:81149983-81150002 | None:intergenic | 45.0% | |
| CGACATTGACACATCATCAC+CGG | + | Chr2:81151858-81151877 | MsG0280011222.01.T01:three_prime_UTR | 45.0% | |
| CGGCGAGAAACTTGATAGAT+GGG | + | Chr2:81152329-81152348 | MsG0280011222.01.T01:three_prime_UTR | 45.0% | |
| CTACAGGGGTGAGAAATTTC+TGG | + | Chr2:81150341-81150360 | MsG0280011222.01.T01:intron | 45.0% | |
| GAACAAACCTCAGTGATAGC+CGG | - | Chr2:81150157-81150176 | None:intergenic | 45.0% | |
| GAGCATATAGAACCAGCGTA+TGG | + | Chr2:81151366-81151385 | MsG0280011222.01.T01:intron | 45.0% | |
| GGCTACATGTACATGCATCA+GGG | - | Chr2:81151577-81151596 | None:intergenic | 45.0% | |
| GTCATGAATGACTGTAACCG+TGG | + | Chr2:81150533-81150552 | MsG0280011222.01.T01:intron | 45.0% | |
| GTGAATCTGCTAGAAGATCC+AGG | + | Chr2:81151188-81151207 | MsG0280011222.01.T01:CDS | 45.0% | |
| GTTGCTCTGTTAGGTTCATG+TGG | + | Chr2:81150232-81150251 | MsG0280011222.01.T01:intron | 45.0% | |
| GTTGGACCTGTACTTTCTTC+AGG | + | Chr2:81150888-81150907 | MsG0280011222.01.T01:CDS | 45.0% | |
| TACAAATGTCAATGCCGTGC+TGG | + | Chr2:81151916-81151935 | MsG0280011222.01.T01:three_prime_UTR | 45.0% | |
| TATAGAACCAGCGTATGGCA+TGG | + | Chr2:81151371-81151390 | MsG0280011222.01.T01:intron | 45.0% | |
| TCGGCGAGAAACTTGATAGA+TGG | + | Chr2:81152328-81152347 | MsG0280011222.01.T01:three_prime_UTR | 45.0% | |
| TGTGGAACACTGGTGGAAAT+AGG | - | Chr2:81150948-81150967 | None:intergenic | 45.0% | |
| TTCAGGTATGACCACATCAC+TGG | + | Chr2:81150905-81150924 | MsG0280011222.01.T01:CDS | 45.0% | |
| ! | ACTTCCAGTAATGGAAGCGA+TGG | + | Chr2:81150313-81150332 | MsG0280011222.01.T01:five_prime_UTR | 45.0% |
| ! | AGTGGTTGTTGGTGTTCCAT+TGG | - | Chr2:81150455-81150474 | None:intergenic | 45.0% |
| ! | GCAGCAGCTGAGTTGAAATA+TGG | - | Chr2:81149720-81149739 | None:intergenic | 45.0% |
| ! | GCAGCTGAGTTGAAATATGG+TGG | - | Chr2:81149717-81149736 | None:intergenic | 45.0% |
| ! | GCTGAGTTGAAATATGGTGG+TGG | - | Chr2:81149714-81149733 | None:intergenic | 45.0% |
| ! | GTTGGTGTCTCTATGCTTGT+AGG | - | Chr2:81150063-81150082 | None:intergenic | 45.0% |
| !! | TGACACCGTCTTTTTGGAAG+CGG | - | Chr2:81150840-81150859 | None:intergenic | 45.0% |
| !! | TGCATTGACTGCCGAGAATT+TGG | + | Chr2:81151692-81151711 | MsG0280011222.01.T01:CDS | 45.0% |
| !! | TGTGAACGGCATTGACAAGA+GGG | + | Chr2:81152077-81152096 | MsG0280011222.01.T01:three_prime_UTR | 45.0% |
| !! | TTGTGAACGGCATTGACAAG+AGG | + | Chr2:81152076-81152095 | MsG0280011222.01.T01:three_prime_UTR | 45.0% |
| AAGCGATGGCAACACTACAG+GGG | + | Chr2:81150327-81150346 | MsG0280011222.01.T01:five_prime_UTR | 50.0% | |
| ACACTGGTGGAAATAGGCGA+AGG | - | Chr2:81150942-81150961 | None:intergenic | 50.0% | |
| ACAGGCTGAGGCTGAAGAAT+TGG | + | Chr2:81151656-81151675 | MsG0280011222.01.T01:intron | 50.0% | |
| AGAGTGAGCTGAAACGTGAG+AGG | + | Chr2:81151147-81151166 | MsG0280011222.01.T01:CDS | 50.0% | |
| AGGAAAACCGGCTATCACTG+AGG | + | Chr2:81150147-81150166 | MsG0280011222.01.T01:five_prime_UTR | 50.0% | |
| AGTACCTGCATCCAAGCTTC+AGG | - | Chr2:81150990-81151009 | None:intergenic | 50.0% | |
| ATTGTAGGGGGGGTCTCTAA+TGG | + | Chr2:81152241-81152260 | MsG0280011222.01.T01:three_prime_UTR | 50.0% | |
| CAAAGCATGGACACAGACAC+TGG | + | Chr2:81151832-81151851 | MsG0280011222.01.T01:three_prime_UTR | 50.0% | |
| CACTGGTGGAAATAGGCGAA+GGG | - | Chr2:81150941-81150960 | None:intergenic | 50.0% | |
| CATTGACAAGAGGGCTACAG+AGG | + | Chr2:81152086-81152105 | MsG0280011222.01.T01:three_prime_UTR | 50.0% | |
| CCAGTGCTGCAGAAAATGGT+TGG | + | Chr2:81150870-81150889 | MsG0280011222.01.T01:CDS | 50.0% | |
| CGCTTCCATTACTGGAAGTC+TGG | - | Chr2:81150312-81150331 | None:intergenic | 50.0% | |
| CTGCTAGAAGATCCAGGCTT+AGG | + | Chr2:81151194-81151213 | MsG0280011222.01.T01:CDS | 50.0% | |
| GAAGATCCAGGCTTAGGCTT+AGG | + | Chr2:81151200-81151219 | MsG0280011222.01.T01:CDS | 50.0% | |
| GAAGCGATGGCAACACTACA+GGG | + | Chr2:81150326-81150345 | MsG0280011222.01.T01:five_prime_UTR | 50.0% | |
| GCAACCAGTGCTGCAGAAAA+TGG | + | Chr2:81150866-81150885 | MsG0280011222.01.T01:CDS | 50.0% | |
| GGGCTACATGTACATGCATC+AGG | - | Chr2:81151578-81151597 | None:intergenic | 50.0% | |
| GTTCCTCAGTTCCAGTGATG+TGG | - | Chr2:81150919-81150938 | None:intergenic | 50.0% | |
| GTTGCCATCGCTTCCATTAC+TGG | - | Chr2:81150320-81150339 | None:intergenic | 50.0% | |
| TCAGGAGGCAAAACTCCACA+AGG | - | Chr2:81150972-81150991 | None:intergenic | 50.0% | |
| TCATGTGTCTGACACCAGCA+CGG | - | Chr2:81151933-81151952 | None:intergenic | 50.0% | |
| TGACCACATCACTGGAACTG+AGG | + | Chr2:81150913-81150932 | MsG0280011222.01.T01:CDS | 50.0% | |
| TTGCTTCCTAAGCCTAAGCC+TGG | - | Chr2:81151209-81151228 | None:intergenic | 50.0% | |
| TTTGGAAGCGGCAGTCTCTT+TGG | - | Chr2:81150828-81150847 | None:intergenic | 50.0% | |
| ! | CCAACCATTTTCTGCAGCAC+TGG | - | Chr2:81150873-81150892 | None:intergenic | 50.0% |
| ! | GACTGCCGCTTCCAAAAAGA+CGG | + | Chr2:81150832-81150851 | MsG0280011222.01.T01:CDS | 50.0% |
| ! | GAGTTTTGCCTCCTGAAGCT+TGG | + | Chr2:81150976-81150995 | MsG0280011222.01.T01:CDS | 50.0% |
| !! | TTGAAAGTGCTGAGCTAGCG+TGG | + | Chr2:81150122-81150141 | MsG0280011222.01.T01:five_prime_UTR | 50.0% |
| ACAAGGCTGTGGAACACTGG+TGG | - | Chr2:81150955-81150974 | None:intergenic | 55.0% | |
| ACATGCATCAGGGCCGTGTT+TGG | - | Chr2:81151567-81151586 | None:intergenic | 55.0% | |
| ACCAGTGTTCCACAGCCTTG+TGG | + | Chr2:81150954-81150973 | MsG0280011222.01.T01:CDS | 55.0% | |
| ACCTGCATCCAAGCTTCAGG+AGG | - | Chr2:81150987-81151006 | None:intergenic | 55.0% | |
| AGCTGAAACGTGAGAGGAGG+AGG | + | Chr2:81151153-81151172 | MsG0280011222.01.T01:CDS | 55.0% | |
| CTTATGGCCATGCCATACGC+TGG | - | Chr2:81151381-81151400 | None:intergenic | 55.0% | |
| GCAGCGACGCGTCATATTGA+AGG | - | Chr2:81151963-81151982 | None:intergenic | 55.0% | |
| GCTAGCGTGGAGAGGAAAAC+CGG | + | Chr2:81150135-81150154 | MsG0280011222.01.T01:five_prime_UTR | 55.0% | |
| GGAAGCGATGGCAACACTAC+AGG | + | Chr2:81150325-81150344 | MsG0280011222.01.T01:five_prime_UTR | 55.0% | |
| GGCAAAACTCCACAAGGCTG+TGG | - | Chr2:81150966-81150985 | None:intergenic | 55.0% | |
| GGGCTCCAGACTTCCAGTAA+TGG | + | Chr2:81150304-81150323 | MsG0280011222.01.T01:five_prime_UTR | 55.0% | |
| GTGAGCTGAAACGTGAGAGG+AGG | + | Chr2:81151150-81151169 | MsG0280011222.01.T01:CDS | 55.0% | |
| TCCACAAGGCTGTGGAACAC+TGG | - | Chr2:81150958-81150977 | None:intergenic | 55.0% | |
| TTCAACTCAGCTGCTGCTCC+TGG | + | Chr2:81149723-81149742 | MsG0280011222.01.T01:five_prime_UTR | 55.0% | |
| ! | CTCAAACGAGGTGCCAGTCT+TGG | - | Chr2:81150673-81150692 | None:intergenic | 55.0% |
| GCCTCCTGAAGCTTGGATGC+AGG | + | Chr2:81150983-81151002 | MsG0280011222.01.T01:CDS | 60.0% | |
| TGACCTGGGGGAAACTACGC+AGG | + | Chr2:81150029-81150048 | MsG0280011222.01.T01:intron | 60.0% | |
| ! | AGTGCTGAGCTAGCGTGGAG+AGG | + | Chr2:81150127-81150146 | MsG0280011222.01.T01:five_prime_UTR | 60.0% |
| CAGCCTGCGTAGTTTCCCCC+AGG | - | Chr2:81150035-81150054 | None:intergenic | 65.0% | |
| CTGGGGGAAACTACGCAGGC+TGG | + | Chr2:81150033-81150052 | MsG0280011222.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 81149691 | 81152446 | 81149691 | ID=MsG0280011222.01;Name=MsG0280011222.01 |
| Chr2 | mRNA | 81149691 | 81152446 | 81149691 | ID=MsG0280011222.01.T01;Parent=MsG0280011222.01;Name=MsG0280011222.01.T01;_AED=0.28;_eAED=0.32;_QI=300|0.8|0.83|1|0.4|0.5|6|646|172 |
| Chr2 | exon | 81149691 | 81149815 | 81149691 | ID=MsG0280011222.01.T01:exon:11977;Parent=MsG0280011222.01.T01 |
| Chr2 | exon | 81150051 | 81150168 | 81150051 | ID=MsG0280011222.01.T01:exon:11978;Parent=MsG0280011222.01.T01 |
| Chr2 | exon | 81150292 | 81150348 | 81150292 | ID=MsG0280011222.01.T01:exon:11979;Parent=MsG0280011222.01.T01 |
| Chr2 | exon | 81150786 | 81151004 | 81150786 | ID=MsG0280011222.01.T01:exon:11980;Parent=MsG0280011222.01.T01 |
| Chr2 | exon | 81151143 | 81151301 | 81151143 | ID=MsG0280011222.01.T01:exon:11981;Parent=MsG0280011222.01.T01 |
| Chr2 | exon | 81151660 | 81152446 | 81151660 | ID=MsG0280011222.01.T01:exon:11982;Parent=MsG0280011222.01.T01 |
| Chr2 | five_prime_UTR | 81149691 | 81149815 | 81149691 | ID=MsG0280011222.01.T01:five_prime_utr;Parent=MsG0280011222.01.T01 |
| Chr2 | five_prime_UTR | 81150051 | 81150168 | 81150051 | ID=MsG0280011222.01.T01:five_prime_utr;Parent=MsG0280011222.01.T01 |
| Chr2 | five_prime_UTR | 81150292 | 81150348 | 81150292 | ID=MsG0280011222.01.T01:five_prime_utr;Parent=MsG0280011222.01.T01 |
| Chr2 | CDS | 81150786 | 81151004 | 81150786 | ID=MsG0280011222.01.T01:cds;Parent=MsG0280011222.01.T01 |
| Chr2 | CDS | 81151143 | 81151301 | 81151143 | ID=MsG0280011222.01.T01:cds;Parent=MsG0280011222.01.T01 |
| Chr2 | CDS | 81151660 | 81151800 | 81151660 | ID=MsG0280011222.01.T01:cds;Parent=MsG0280011222.01.T01 |
| Chr2 | three_prime_UTR | 81151801 | 81152446 | 81151801 | ID=MsG0280011222.01.T01:three_prime_utr;Parent=MsG0280011222.01.T01 |
| Gene Sequence |
| Protein sequence |
