AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043291.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043291.01.T01 MTR_8g432630 89.213 445 9 1 1 406 1 445 0.0 803
MsG0880043291.01.T01 MTR_7g076160 64.877 447 112 5 1 406 1 443 0.0 555
MsG0880043291.01.T01 MTR_6g025300 32.216 388 150 9 41 321 211 592 4.41e-44 163
MsG0880043291.01.T01 MTR_4g104080 27.737 137 99 0 241 377 235 371 9.25e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043291.01.T01 AT3G61140 68.834 446 94 4 1 406 1 441 0.0 622
MsG0880043291.01.T01 AT3G12850 27.566 341 189 13 39 354 11 318 8.48e-20 90.5

Find 130 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAATGGGATACAATGATTT+TGG 0.173359 8:-22113455 MsG0880043291.01.T01:CDS
TTAAACATGACTTCAATATT+AGG 0.175164 8:-22111412 MsG0880043291.01.T01:CDS
GAGAGAATACGCAGTTGTTT+AGG 0.234580 8:-22115559 MsG0880043291.01.T01:CDS
CATCAAGGAAACTTTGATTA+TGG 0.235732 8:-22111388 MsG0880043291.01.T01:exon
CGTCTTCTGCGTCCATGAAT+TGG 0.249373 8:+22115816 None:intergenic
GAGGGGTATGAGATGGATTT+GGG 0.259340 8:-22115503 MsG0880043291.01.T01:CDS
TGAGGGGTATGAGATGGATT+TGG 0.292623 8:-22115504 MsG0880043291.01.T01:CDS
TGGATTTGGGTTGGTGTGAT+GGG 0.299034 8:-22115490 MsG0880043291.01.T01:CDS
TAAACATGACTTCAATATTA+GGG 0.299578 8:-22111411 MsG0880043291.01.T01:CDS
AGAGAATACGCAGTTGTTTA+GGG 0.301080 8:-22115558 MsG0880043291.01.T01:CDS
TTTCAAAGGGTTCTAGAAAC+TGG 0.314327 8:-22111485 MsG0880043291.01.T01:CDS
TGCGTCCATGAATTGGGATT+AGG 0.316635 8:+22115823 None:intergenic
CATGAATTGGGATTAGGGTT+AGG 0.323344 8:+22115829 None:intergenic
AAGAAGATTTCCCTACCTTA+TGG 0.324969 8:-22111298 MsG0880043291.01.T01:three_prime_UTR
TACTATTCTCATGGTCTACT+AGG 0.328740 8:-22113425 MsG0880043291.01.T01:CDS
GCGTCCATGAATTGGGATTA+GGG 0.334554 8:+22115824 None:intergenic
AGAATGAGCTTAATGCTTAT+AGG 0.336138 8:-22115430 MsG0880043291.01.T01:CDS
ATGGATTTGGGTTGGTGTGA+TGG 0.340791 8:-22115491 MsG0880043291.01.T01:CDS
GTGTAGATTTCGTCGATCAT+TGG 0.344094 8:+22115782 None:intergenic
TTTATCAGTTCCCTTACTTC+AGG 0.348387 8:+22112704 None:intergenic
CCAGCGACAGATTTGATTTG+AGG 0.367542 8:+22111978 None:intergenic
GAATGAGCTTAATGCTTATA+GGG 0.369021 8:-22115429 MsG0880043291.01.T01:intron
GTCTTCTGCGTCCATGAATT+GGG 0.375131 8:+22115817 None:intergenic
CAGCCACTATGCTTCCTGTC+TGG 0.383868 8:-22112014 MsG0880043291.01.T01:CDS
ATGGGAGTGTATACTGGATA+AGG 0.390701 8:+22111900 None:intergenic
CGTAGCTTGGAAGTTATTAT+CGG 0.394503 8:+22113239 None:intergenic
CAAAACGCTCCGTTGGGGTC+GGG 0.397370 8:+22115959 None:intergenic
ACACAAATGGGAGTGTATAC+TGG 0.406626 8:+22111894 None:intergenic
TAGAGTTGGTACCTGAAGTA+AGG 0.410848 8:-22112715 MsG0880043291.01.T01:CDS
ATGAATTGGGATTAGGGTTA+GGG 0.411344 8:+22115830 None:intergenic
TGGAGCTTTGACATAATTGT+TGG 0.414061 8:-22111116 MsG0880043291.01.T01:three_prime_UTR
AATCAAAGCCGAAAAGGAAA+TGG 0.416182 8:+22111161 None:intergenic
GATTATGGATTGAAGACAAC+AGG 0.421249 8:-22111373 MsG0880043291.01.T01:three_prime_UTR
CTCTAAGAAATTGCGGAAGT+TGG 0.423840 8:+22112733 None:intergenic
GCATTCAAGACAACTGTTGT+TGG 0.425392 8:-22111845 MsG0880043291.01.T01:CDS
TTCAAATCAACAGACACAAA+TGG 0.428476 8:+22111881 None:intergenic
AAGATTCAAAACGCTCCGTT+GGG 0.433288 8:+22115953 None:intergenic
GAGTTATTGCATCACATGAT+AGG 0.434400 8:-22111094 MsG0880043291.01.T01:three_prime_UTR
GATTGTGTTGAATCTGTTGA+TGG 0.441744 8:+22115884 None:intergenic
CTAACCCTAATCCCAATTCA+TGG 0.444537 8:-22115828 MsG0880043291.01.T01:exon
GATTGATGGGAGGTTGGGTG+AGG 0.449464 8:-22115522 MsG0880043291.01.T01:CDS
TGTAGATTTCGTCGATCATT+GGG 0.450278 8:+22115783 None:intergenic
GTCTGTTGATTTGAATATGA+TGG 0.462690 8:-22111873 MsG0880043291.01.T01:CDS
GCTACGATGCGCCGCAGGAT+TGG 0.465083 8:-22113222 MsG0880043291.01.T01:CDS
TTCGTCGATCATTGGGTTTG+AGG 0.465364 8:+22115790 None:intergenic
ACTATTCTCATGGTCTACTA+GGG 0.470008 8:-22113424 MsG0880043291.01.T01:CDS
CTATGTTAACAAGGCAGAGC+AGG 0.472146 8:-22113279 MsG0880043291.01.T01:CDS
GGATTTGGGTTGGTGTGATG+GGG 0.475054 8:-22115489 MsG0880043291.01.T01:CDS
TCAAATCAACAGACACAAAT+GGG 0.478924 8:+22111882 None:intergenic
CTTCCGCAATTTCTTAGAGT+TGG 0.479444 8:-22112729 MsG0880043291.01.T01:CDS
GAAGCTCGACGCGCTTCGAT+TGG 0.480351 8:-22115603 MsG0880043291.01.T01:CDS
GAAGTTGTGATGAAGATTGA+TGG 0.481600 8:-22115536 MsG0880043291.01.T01:CDS
ATTAATTTGTACTGTTCTGT+GGG 0.482963 8:-22111046 MsG0880043291.01.T01:three_prime_UTR
AGATTTCCCTACCTTATGGC+TGG 0.483320 8:-22111294 MsG0880043291.01.T01:three_prime_UTR
ACGGTTGGTACGGTTGTTGT+CGG 0.484260 8:+22115742 None:intergenic
CTTCCTGTCTGGAATACCTT+GGG 0.489655 8:-22112003 MsG0880043291.01.T01:CDS
TCCTGCGGCGCATCGTAGCT+TGG 0.489756 8:+22113226 None:intergenic
GTTGGTGTGATGGGGTTGAG+AGG 0.492699 8:-22115481 MsG0880043291.01.T01:CDS
CCTTGATTCAACCAGCCATA+AGG 0.500700 8:+22111283 None:intergenic
GATTACTGATAATCAAATAC+AGG 0.501737 8:-22111798 MsG0880043291.01.T01:intron
GATGAAGATTGATGGGAGGT+TGG 0.508290 8:-22115528 MsG0880043291.01.T01:CDS
ATGAAGATTGATGGGAGGTT+GGG 0.508768 8:-22115527 MsG0880043291.01.T01:CDS
TTGATGGGAGGTTGGGTGAG+GGG 0.509103 8:-22115520 MsG0880043291.01.T01:CDS
CCTTATGGCTGGTTGAATCA+AGG 0.509913 8:-22111283 MsG0880043291.01.T01:three_prime_UTR
TGGGAGTGTATACTGGATAA+GGG 0.513868 8:+22111901 None:intergenic
AAGGAATGCCACCTTTCAAA+GGG 0.513987 8:-22111498 MsG0880043291.01.T01:CDS
GAAGATTCAAAACGCTCCGT+TGG 0.514208 8:+22115952 None:intergenic
GATTAATTTGTACTGTTCTG+TGG 0.515029 8:-22111047 MsG0880043291.01.T01:three_prime_UTR
GTTGGGTGAGGGGTATGAGA+TGG 0.516428 8:-22115510 MsG0880043291.01.T01:CDS
AAAGGAATGCCACCTTTCAA+AGG 0.518395 8:-22111499 MsG0880043291.01.T01:CDS
TGGAAGTTATTATCGGGTCA+AGG 0.518981 8:+22113246 None:intergenic
TCCAAGCTACGATGCGCCGC+AGG 0.519532 8:-22113227 MsG0880043291.01.T01:CDS
ATTAAAGAAAGCATACGAAT+GGG 0.521524 8:-22113470 MsG0880043291.01.T01:CDS
ATTGATGGGAGGTTGGGTGA+GGG 0.521930 8:-22115521 MsG0880043291.01.T01:CDS
CCTCAAATCAAATCTGTCGC+TGG 0.526883 8:-22111978 MsG0880043291.01.T01:CDS
TGATGGGGTTGAGAGGAAGA+TGG 0.528170 8:-22115474 MsG0880043291.01.T01:CDS
AATTCTAGTCAGCATTGAGA+TGG 0.528374 8:-22113324 MsG0880043291.01.T01:CDS
GCTCATGATTGCGCGACGGT+TGG 0.532016 8:+22115727 None:intergenic
GCGTATGATGAGATTAAGAA+AGG 0.534614 8:-22115581 MsG0880043291.01.T01:CDS
GTATAAGCTTGCTGCTCGAA+AGG 0.538438 8:-22113180 MsG0880043291.01.T01:intron
TTCTAGAACCCTTTGAAAGG+TGG 0.540033 8:+22111490 None:intergenic
TCAAAACGCTCCGTTGGGGT+CGG 0.540621 8:+22115958 None:intergenic
TTGATGTAGTGCAATAATCC+CGG 0.540797 8:+22113375 None:intergenic
GTCGGCGTCGTCACCGCCGT+TGG 0.541524 8:+22115760 None:intergenic
AATTAAAGAAAGCATACGAA+TGG 0.542641 8:-22113471 MsG0880043291.01.T01:CDS
ATACATAATCAAAGCCGAAA+AGG 0.542931 8:+22111155 None:intergenic
GGTATGAGATGGATTTGGGT+TGG 0.544573 8:-22115499 MsG0880043291.01.T01:CDS
GCTTCCTGTCTGGAATACCT+TGG 0.554474 8:-22112004 MsG0880043291.01.T01:CDS
GTAGCTTGGAAGTTATTATC+GGG 0.559121 8:+22113240 None:intergenic
TTAAAAGTTATGTTCGTACC+CGG 0.559675 8:-22113394 MsG0880043291.01.T01:CDS
GGAAATGGAGATCTAGTGAC+GGG 0.560436 8:+22111176 None:intergenic
GTTCCCAAGGTATTCCAGAC+AGG 0.563223 8:+22112000 None:intergenic
GTATTGTTACTCTATCAGAA+TGG 0.563556 8:-22111136 MsG0880043291.01.T01:three_prime_UTR
ACTTCAATATTAGGGCATCA+AGG 0.566142 8:-22111403 MsG0880043291.01.T01:CDS
CGCAGGATTGGCAAATCTAG+AGG 0.567781 8:-22113210 MsG0880043291.01.T01:CDS
GATTTGATTTGAGGTTCCCA+AGG 0.575211 8:+22111987 None:intergenic
TGATTGCGCGACGGTTGGTA+CGG 0.578050 8:+22115732 None:intergenic
AATTTGTACTGTTCTGTGGG+TGG 0.581516 8:-22111043 MsG0880043291.01.T01:three_prime_UTR
TGATGTAGTGCAATAATCCC+GGG 0.582207 8:+22113376 None:intergenic
CGCCGCTCATGATTGCGCGA+CGG 0.583779 8:+22115723 None:intergenic
GGAAGTTATTATCGGGTCAA+GGG 0.585222 8:+22113247 None:intergenic
GCTTACTCCTCTCTCTACTC+AGG 0.588216 8:-22115683 MsG0880043291.01.T01:CDS
AGTTTCTAGAACCCTTTGAA+AGG 0.589137 8:+22111487 None:intergenic
AGATGGAGCAGAAGAAAGAG+AGG 0.591119 8:-22115457 MsG0880043291.01.T01:CDS
ATTCTAGTCAGCATTGAGAT+GGG 0.597136 8:-22113323 MsG0880043291.01.T01:CDS
TAAAAGTTATGTTCGTACCC+GGG 0.599599 8:-22113393 MsG0880043291.01.T01:CDS
GATTCAACCAGCCATAAGGT+AGG 0.602462 8:+22111287 None:intergenic
AGAGTTGGTACCTGAAGTAA+GGG 0.603689 8:-22112714 MsG0880043291.01.T01:CDS
AGTAAGCTTCGATGTCGAGT+TGG 0.604462 8:+22115699 None:intergenic
ATTCAACCAGCCATAAGGTA+GGG 0.607564 8:+22111288 None:intergenic
ATGCACGACATGCAGATCAA+AGG 0.613681 8:-22111517 MsG0880043291.01.T01:CDS
TGTTCGACCTGAGTAGAGAG+AGG 0.615845 8:+22115676 None:intergenic
AAGTTGTGATGAAGATTGAT+GGG 0.618821 8:-22115535 MsG0880043291.01.T01:CDS
TGTCTCAAGCTATGTTAACA+AGG 0.619773 8:-22113288 MsG0880043291.01.T01:CDS
AAGGGTTCTAGAAACTGGAA+AGG 0.619982 8:-22111480 MsG0880043291.01.T01:CDS
CTATTCTCATGGTCTACTAG+GGG 0.620012 8:-22113423 MsG0880043291.01.T01:CDS
AACCGTCGCGCAATCATGAG+CGG 0.626141 8:-22115725 MsG0880043291.01.T01:CDS
GTACCAACTCTAAGAAATTG+CGG 0.627276 8:+22112726 None:intergenic
ATTCCAGACAGGAAGCATAG+TGG 0.635504 8:+22112011 None:intergenic
AGGAAATGGAGATCTAGTGA+CGG 0.639190 8:+22111175 None:intergenic
CTCTAGATTTGCCAATCCTG+CGG 0.641209 8:+22113211 None:intergenic
TTGTGATGAAGATTGATGGG+AGG 0.641300 8:-22115532 MsG0880043291.01.T01:CDS
TCTAACATCCCCGACCCCAA+CGG 0.643696 8:-22115968 None:intergenic
AAGATTTGATCTCAGCAACA+TGG 0.646308 8:+22111436 None:intergenic
ATCGACGAAATCTACACCAA+CGG 0.654684 8:-22115776 MsG0880043291.01.T01:CDS
GAACAAGAGCAAGAACGCTA+CGG 0.656521 8:-22115627 MsG0880043291.01.T01:CDS
GATCGTAAAGTGTCTCAACA+TGG 0.668297 8:+22111939 None:intergenic
AGATTCAAAACGCTCCGTTG+GGG 0.681095 8:+22115954 None:intergenic
CAGGTCGAACAAAGATCATG+CGG 0.684498 8:-22115664 MsG0880043291.01.T01:CDS
GACGAAATCTACACCAACGG+CGG 0.740767 8:-22115773 MsG0880043291.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAGAAATCTTTA+AGG + Chr8:22113243-22113262 None:intergenic 10.0%
!! ATTAGAGAAAATATATATTT+GGG - Chr8:22114383-22114402 MsG0880043291.01.T01:intron 10.0%
!! TATTAGAGAAAATATATATT+TGG - Chr8:22114382-22114401 MsG0880043291.01.T01:intron 10.0%
!! AAAAATAAAAGAAATCTTGA+AGG + Chr8:22113491-22113510 None:intergenic 15.0%
!! ATAAACACTTGAAATTATTT+GGG - Chr8:22112047-22112066 MsG0880043291.01.T01:intron 15.0%
!! TAGACTTAATTGATATTTAT+GGG - Chr8:22114743-22114762 MsG0880043291.01.T01:intron 15.0%
!! TTAGACTTAATTGATATTTA+TGG - Chr8:22114742-22114761 MsG0880043291.01.T01:intron 15.0%
!! TTAGAGAAAATATATATTTG+GGG - Chr8:22114384-22114403 MsG0880043291.01.T01:intron 15.0%
!!! AACTTTGTTATTATTGTTTA+GGG - Chr8:22111912-22111931 MsG0880043291.01.T01:CDS 15.0%
!!! CAACATTTAAAGAAATTTTA+TGG - Chr8:22115760-22115779 MsG0880043291.01.T01:CDS 15.0%
!!! TAATTTTATATAACATATCC+TGG + Chr8:22115269-22115288 None:intergenic 15.0%
!!! TTATTCTTATTTTTGGATAT+GGG + Chr8:22113356-22113375 None:intergenic 15.0%
!!! TTTATTCAAACTATTTTGTA+AGG - Chr8:22112649-22112668 MsG0880043291.01.T01:intron 15.0%
!!! TTTATTCTTATTTTTGGATA+TGG + Chr8:22113357-22113376 None:intergenic 15.0%
!! AGACTTAATTGATATTTATG+GGG - Chr8:22114744-22114763 MsG0880043291.01.T01:intron 20.0%
!! ATATGAAAATAAGCTTAGAA+GGG + Chr8:22112116-22112135 None:intergenic 20.0%
!! CATAAACACTTGAAATTATT+TGG - Chr8:22112046-22112065 MsG0880043291.01.T01:intron 20.0%
!! GAAAATAGTTTATAACCTAT+GGG - Chr8:22111757-22111776 MsG0880043291.01.T01:intron 20.0%
!! GATCTATGAAATATTCTATT+TGG - Chr8:22113913-22113932 MsG0880043291.01.T01:intron 20.0%
!! TAAACATGACTTCAATATTA+GGG - Chr8:22115584-22115603 MsG0880043291.01.T01:CDS 20.0%
!! TATATGAAAATAAGCTTAGA+AGG + Chr8:22112117-22112136 None:intergenic 20.0%
!! TGAAAATAGTTTATAACCTA+TGG - Chr8:22111756-22111775 MsG0880043291.01.T01:intron 20.0%
!! TTAAACATGACTTCAATATT+AGG - Chr8:22115583-22115602 MsG0880043291.01.T01:CDS 20.0%
!!! AAATTAAAGCATTTCAAAAC+TGG - Chr8:22114807-22114826 MsG0880043291.01.T01:intron 20.0%
!!! AACAGTCAAGTTTTTTTATT+TGG - Chr8:22112319-22112338 MsG0880043291.01.T01:intron 20.0%
!!! AAGATAGCTTATTTTTATAG+GGG - Chr8:22112145-22112164 MsG0880043291.01.T01:intron 20.0%
!!! ACAGTCAAGTTTTTTTATTT+GGG - Chr8:22112320-22112339 MsG0880043291.01.T01:intron 20.0%
!!! ATTTCTTTTCTTACTTAACA+TGG - Chr8:22114512-22114531 MsG0880043291.01.T01:intron 20.0%
!!! CAAGATAGCTTATTTTTATA+GGG - Chr8:22112144-22112163 MsG0880043291.01.T01:intron 20.0%
!!! GAACTTTGTTATTATTGTTT+AGG - Chr8:22111911-22111930 MsG0880043291.01.T01:CDS 20.0%
!!! TTCAATTTTTGTATTGCTAT+TGG - Chr8:22112681-22112700 MsG0880043291.01.T01:intron 20.0%
!!! TTGATTGAATTTTGTTGAAT+CGG - Chr8:22114833-22114852 MsG0880043291.01.T01:intron 20.0%
!!! TTTTGTATATACTCTTTCAT+AGG - Chr8:22115788-22115807 MsG0880043291.01.T01:CDS 20.0%
! AAACAATAACAACAAAAACG+AGG + Chr8:22111606-22111625 None:intergenic 25.0%
! AAATATTGAGCTACATGAAT+AGG - Chr8:22113376-22113395 MsG0880043291.01.T01:CDS 25.0%
! AATTGTATGCCAAAGTTATT+TGG + Chr8:22115331-22115350 None:intergenic 25.0%
! AATTTGGCATCATCTTATAT+TGG - Chr8:22113050-22113069 MsG0880043291.01.T01:intron 25.0%
! ACACAATCATTGTTTATGAT+AGG - Chr8:22112285-22112304 MsG0880043291.01.T01:intron 25.0%
! ACCTATTAACTTCATTTCTT+TGG - Chr8:22113981-22114000 MsG0880043291.01.T01:intron 25.0%
! ATCCAACAGTTTCATAAATT+AGG + Chr8:22115419-22115438 None:intergenic 25.0%
! ATTTCAGATCATCCAAAATA+AGG + Chr8:22112623-22112642 None:intergenic 25.0%
! CAACTACCTTGATTAAATTA+CGG - Chr8:22113191-22113210 MsG0880043291.01.T01:CDS 25.0%
! CAATGATTGTGTTTAGATTA+AGG + Chr8:22112277-22112296 None:intergenic 25.0%
! CCTATAAAAATAAGCTATCT+TGG + Chr8:22112146-22112165 None:intergenic 25.0%
! GAAATGAATTAGGTTATGAT+TGG - Chr8:22111698-22111717 MsG0880043291.01.T01:intron 25.0%
! GATTACTGATAATCAAATAC+AGG - Chr8:22115197-22115216 MsG0880043291.01.T01:intron 25.0%
! TAAAAATAAGCTATCTTGGA+TGG + Chr8:22112142-22112161 None:intergenic 25.0%
! TAAAATTGAGAGTCTTAGTT+TGG - Chr8:22114593-22114612 MsG0880043291.01.T01:intron 25.0%
! TAATCGTCATGAAAATACAA+TGG + Chr8:22114160-22114179 None:intergenic 25.0%
! TACATGTGATTATGGTAATT+AGG - Chr8:22114425-22114444 MsG0880043291.01.T01:intron 25.0%
! TATCAAGTGTTAACTAGTAT+AGG - Chr8:22112474-22112493 MsG0880043291.01.T01:intron 25.0%
! TCTGTTTGTATTGAATTGAA+TGG - Chr8:22112757-22112776 MsG0880043291.01.T01:intron 25.0%
! TGATGTTCCATAAAACAAAA+TGG + Chr8:22112827-22112846 None:intergenic 25.0%
! TGTCTCTTACTAAAAAAAGA+AGG - Chr8:22115364-22115383 MsG0880043291.01.T01:intron 25.0%
! TTCTTGCTTAACTAAATCAA+AGG - Chr8:22114570-22114589 MsG0880043291.01.T01:intron 25.0%
! TTTCAACATGAAATGAATCA+GGG - Chr8:22111995-22112014 MsG0880043291.01.T01:CDS 25.0%
! TTTCAGATCATCCAAAATAA+GGG + Chr8:22112622-22112641 None:intergenic 25.0%
!! AAACATCTAAAACCTTTATC+TGG + Chr8:22113275-22113294 None:intergenic 25.0%
!! AATTAAAGAAAGCATACGAA+TGG - Chr8:22113524-22113543 MsG0880043291.01.T01:intron 25.0%
!! AATTTTGTTGAATCGGTAAT+TGG - Chr8:22114840-22114859 MsG0880043291.01.T01:intron 25.0%
!! ATTAAAGAAAGCATACGAAT+GGG - Chr8:22113525-22113544 MsG0880043291.01.T01:intron 25.0%
!! ATTCCAATTCTTTTCAATTC+CGG + Chr8:22114678-22114697 None:intergenic 25.0%
!! TGATAAATGACTTTTACTCA+AGG - Chr8:22114307-22114326 MsG0880043291.01.T01:intron 25.0%
!! TGTATGTAATACACTAGTTT+AGG - Chr8:22114464-22114483 MsG0880043291.01.T01:intron 25.0%
!! TTTTCAACATGAAATGAATC+AGG - Chr8:22111994-22112013 MsG0880043291.01.T01:CDS 25.0%
!! TTTTCATACAAACCAGATAA+AGG - Chr8:22113260-22113279 MsG0880043291.01.T01:CDS 25.0%
!!! ACATGAATAGGTTTTATACT+GGG - Chr8:22113388-22113407 MsG0880043291.01.T01:CDS 25.0%
!!! AGGTTTACCATTTTGTTTTA+TGG - Chr8:22112817-22112836 MsG0880043291.01.T01:intron 25.0%
!!! ATTAATTTGTACTGTTCTGT+GGG - Chr8:22115949-22115968 MsG0880043291.01.T01:five_prime_UTR 25.0%
!!! ATTTGTTTGGTTGATTTTTC+TGG - Chr8:22112729-22112748 MsG0880043291.01.T01:CDS 25.0%
!!! ATTTTTGTATTGCTATTGGA+TGG - Chr8:22112685-22112704 MsG0880043291.01.T01:intron 25.0%
!!! CCAAGATAGCTTATTTTTAT+AGG - Chr8:22112143-22112162 MsG0880043291.01.T01:intron 25.0%
!!! CGTTTTTGTTGTTATTGTTT+AGG - Chr8:22111606-22111625 MsG0880043291.01.T01:intron 25.0%
!!! GTAAAAGTAATTTTTTCCAC+TGG + Chr8:22111090-22111109 None:intergenic 25.0%
!!! TACATGAATAGGTTTTATAC+TGG - Chr8:22113387-22113406 MsG0880043291.01.T01:CDS 25.0%
!!! TGATTGGATTGACTTATTTT+AGG - Chr8:22111714-22111733 MsG0880043291.01.T01:intron 25.0%
!!! TGTAAATTGTTAATTTGCTG+AGG - Chr8:22112506-22112525 MsG0880043291.01.T01:intron 25.0%
!!! TGTTTAGCTTGTTTTAGTAT+AGG - Chr8:22112431-22112450 MsG0880043291.01.T01:intron 25.0%
AAGTTGTGATGAAGATTGAT+GGG - Chr8:22111460-22111479 MsG0880043291.01.T01:CDS 30.0%
AATCTGAGCAAATTAACCAA+CGG + Chr8:22112403-22112422 None:intergenic 30.0%
AGAATGAGCTTAATGCTTAT+AGG - Chr8:22111565-22111584 MsG0880043291.01.T01:intron 30.0%
AGCTGCAATTACTTCATTAT+AGG + Chr8:22114065-22114084 None:intergenic 30.0%
ATACATAATCAAAGCCGAAA+AGG + Chr8:22115843-22115862 None:intergenic 30.0%
CAACAGTTTCATAAATTAGG+AGG + Chr8:22115416-22115435 None:intergenic 30.0%
CACGGCATTATTATTTGATA+TGG - Chr8:22113125-22113144 MsG0880043291.01.T01:intron 30.0%
CATCAAGGAAACTTTGATTA+TGG - Chr8:22115607-22115626 MsG0880043291.01.T01:CDS 30.0%
CGTAATTTAATCAAGGTAGT+TGG + Chr8:22113193-22113212 None:intergenic 30.0%
CTCCTAATTTATGAAACTGT+TGG - Chr8:22115414-22115433 MsG0880043291.01.T01:intron 30.0%
CTGTATAGTACATGTGATTA+TGG - Chr8:22114417-22114436 MsG0880043291.01.T01:intron 30.0%
GAATCGGTAATTGGTATTAA+CGG - Chr8:22114849-22114868 MsG0880043291.01.T01:intron 30.0%
GAATGAGCTTAATGCTTATA+GGG - Chr8:22111566-22111585 MsG0880043291.01.T01:intron 30.0%
GCCAAAGAAATGAAGTTAAT+AGG + Chr8:22113985-22114004 None:intergenic 30.0%
GTATTGTTACTCTATCAGAA+TGG - Chr8:22115859-22115878 MsG0880043291.01.T01:five_prime_UTR 30.0%
GTTTAGATTAAGGCTCTATT+TGG + Chr8:22112267-22112286 None:intergenic 30.0%
GTTTGACTATAGCATTTGTT+TGG - Chr8:22112716-22112735 MsG0880043291.01.T01:CDS 30.0%
TCAAATCAACAGACACAAAT+GGG + Chr8:22115116-22115135 None:intergenic 30.0%
TCGATTGAACTTTGTTAGTT+TGG - Chr8:22112345-22112364 MsG0880043291.01.T01:intron 30.0%
TGTTGTGTTAAATAGTTGTG+TGG - Chr8:22112930-22112949 MsG0880043291.01.T01:intron 30.0%
TTAAAAGTTATGTTCGTACC+CGG - Chr8:22113601-22113620 MsG0880043291.01.T01:intron 30.0%
TTAATCAAGGTAGTTGGAAA+AGG + Chr8:22113187-22113206 None:intergenic 30.0%
TTCAAATCAACAGACACAAA+TGG + Chr8:22115117-22115136 None:intergenic 30.0%
TTCTCATCGTGAAATGAATT+AGG - Chr8:22111688-22111707 MsG0880043291.01.T01:intron 30.0%
TTTACTGAGCACAAATCAAA+AGG + Chr8:22114790-22114809 None:intergenic 30.0%
! AAAGTGTTTCTTTCCGTAAT+TGG - Chr8:22113303-22113322 MsG0880043291.01.T01:CDS 30.0%
! AATACACTAGTTTAGGCATA+TGG - Chr8:22114471-22114490 MsG0880043291.01.T01:intron 30.0%
! AATATTCTATTTGGAGCTTG+AGG - Chr8:22113922-22113941 MsG0880043291.01.T01:intron 30.0%
! ATTTCAAGTGTTTATGCTAG+TGG + Chr8:22112042-22112061 None:intergenic 30.0%
! TCTTATATTGGTTACTGTGT+TGG - Chr8:22113062-22113081 MsG0880043291.01.T01:intron 30.0%
!! AATAGGTTTTATACTGGGAT+GGG - Chr8:22113393-22113412 MsG0880043291.01.T01:CDS 30.0%
!! GATTAATTTGTACTGTTCTG+TGG - Chr8:22115948-22115967 MsG0880043291.01.T01:five_prime_UTR 30.0%
!! GTCTGTTGATTTGAATATGA+TGG - Chr8:22115122-22115141 MsG0880043291.01.T01:intron 30.0%
!!! TTCTTATTTTTGGATATGGG+TGG + Chr8:22113353-22113372 None:intergenic 30.0%
!!! TTTGTTTTGCCGCTTATAAA+GGG - Chr8:22111877-22111896 MsG0880043291.01.T01:CDS 30.0%
!!! TTTTGTTTTGCCGCTTATAA+AGG - Chr8:22111876-22111895 MsG0880043291.01.T01:CDS 30.0%
AAGAAGATTTCCCTACCTTA+TGG - Chr8:22115697-22115716 MsG0880043291.01.T01:CDS 35.0%
AAGATTTGATCTCAGCAACA+TGG + Chr8:22115562-22115581 None:intergenic 35.0%
AATCAAAGCCGAAAAGGAAA+TGG + Chr8:22115837-22115856 None:intergenic 35.0%
ACTATTCTCATGGTCTACTA+GGG - Chr8:22113571-22113590 MsG0880043291.01.T01:intron 35.0%
AGAGAATACGCAGTTGTTTA+GGG - Chr8:22111437-22111456 MsG0880043291.01.T01:CDS 35.0%
ATGAATTGGGATTAGGGTTA+GGG + Chr8:22111168-22111187 None:intergenic 35.0%
ATTCTGAATTAGTGTCCCAT+TGG - Chr8:22113154-22113173 MsG0880043291.01.T01:intron 35.0%
ATTTGATAGGGCAGAGTTAA+AGG - Chr8:22114126-22114145 MsG0880043291.01.T01:intron 35.0%
CAACTTTCGTCGTGTATAAT+AGG - Chr8:22111800-22111819 MsG0880043291.01.T01:CDS 35.0%
CAATGCATAGTAACTCAAAC+CGG + Chr8:22115224-22115243 None:intergenic 35.0%
CAGCAACCGTAATTTAATCA+AGG + Chr8:22113200-22113219 None:intergenic 35.0%
CCACTAAGTATCAAAAAGCA+TGG + Chr8:22112864-22112883 None:intergenic 35.0%
CGTAGCTTGGAAGTTATTAT+CGG + Chr8:22113759-22113778 None:intergenic 35.0%
CTGATAATCAAATACAGGTC+CGG - Chr8:22115202-22115221 MsG0880043291.01.T01:intron 35.0%
CTTCTTTACCATGCCAATTA+CGG + Chr8:22113319-22113338 None:intergenic 35.0%
GAAGTTGTGATGAAGATTGA+TGG - Chr8:22111459-22111478 MsG0880043291.01.T01:CDS 35.0%
GAATCAGGGTATGTTTAGAT+TGG - Chr8:22112009-22112028 MsG0880043291.01.T01:CDS 35.0%
GAGTTATTGCATCACATGAT+AGG - Chr8:22115901-22115920 MsG0880043291.01.T01:five_prime_UTR 35.0%
GATTGTGTTGAATCTGTTGA+TGG + Chr8:22111114-22111133 None:intergenic 35.0%
GCGTATGATGAGATTAAGAA+AGG - Chr8:22111414-22111433 MsG0880043291.01.T01:CDS 35.0%
GTAGCTTGGAAGTTATTATC+GGG + Chr8:22113758-22113777 None:intergenic 35.0%
TAAAAGTTATGTTCGTACCC+GGG - Chr8:22113602-22113621 MsG0880043291.01.T01:intron 35.0%
TAATGACTACTCAGAGACAT+TGG - Chr8:22114187-22114206 MsG0880043291.01.T01:intron 35.0%
TACTATTCTCATGGTCTACT+AGG - Chr8:22113570-22113589 MsG0880043291.01.T01:intron 35.0%
TATGCCAGACTATATTGTCA+CGG - Chr8:22113107-22113126 MsG0880043291.01.T01:intron 35.0%
TGACCGGAATTGAAAAGAAT+TGG - Chr8:22114672-22114691 MsG0880043291.01.T01:intron 35.0%
TGCACTTGCAACATTTGATA+GGG - Chr8:22114114-22114133 MsG0880043291.01.T01:intron 35.0%
TGCATTAAATAGCAGAAACG+TGG + Chr8:22114010-22114029 None:intergenic 35.0%
TGTAGATTTCGTCGATCATT+GGG + Chr8:22111215-22111234 None:intergenic 35.0%
TGTCTCAAGCTATGTTAACA+AGG - Chr8:22113707-22113726 MsG0880043291.01.T01:intron 35.0%
TGTTTGTCTGTGAAAATGAC+CGG - Chr8:22114656-22114675 MsG0880043291.01.T01:intron 35.0%
TTAGATTCTGCTCAAACTAC+TGG - Chr8:22113876-22113895 MsG0880043291.01.T01:intron 35.0%
TTGATGTAGTGCAATAATCC+CGG + Chr8:22113623-22113642 None:intergenic 35.0%
TTTATCAGTTCCCTTACTTC+AGG + Chr8:22114294-22114313 None:intergenic 35.0%
! AAAAAGCATGGAGAACGTAA+TGG + Chr8:22112852-22112871 None:intergenic 35.0%
! AATTCTAGTCAGCATTGAGA+TGG - Chr8:22113671-22113690 MsG0880043291.01.T01:intron 35.0%
! AATTGAGAGTCTTAGTTTGG+TGG - Chr8:22114596-22114615 MsG0880043291.01.T01:intron 35.0%
! ACGTCAGATTATTTTCCCAT+AGG + Chr8:22111775-22111794 None:intergenic 35.0%
! ACTTCAATATTAGGGCATCA+AGG - Chr8:22115592-22115611 MsG0880043291.01.T01:CDS 35.0%
! ATTCTAGTCAGCATTGAGAT+GGG - Chr8:22113672-22113691 MsG0880043291.01.T01:intron 35.0%
! CGAATGGGATACAATGATTT+TGG - Chr8:22113540-22113559 MsG0880043291.01.T01:intron 35.0%
! CTAGATCTCCATTTCCTTTT+CGG - Chr8:22115826-22115845 MsG0880043291.01.T01:exon 35.0%
! GACTTTTACTCAAGGTAAGT+GGG - Chr8:22114315-22114334 MsG0880043291.01.T01:intron 35.0%
! GATTATGGATTGAAGACAAC+AGG - Chr8:22115622-22115641 MsG0880043291.01.T01:CDS 35.0%
! GGAGACTTTTACTATTCTCA+TGG - Chr8:22113561-22113580 MsG0880043291.01.T01:intron 35.0%
! GTACCAACTCTAAGAAATTG+CGG + Chr8:22114272-22114291 None:intergenic 35.0%
! GTTTGGATTTGTCACTTATC+CGG - Chr8:22112362-22112381 MsG0880043291.01.T01:intron 35.0%
! TGACTTTTACTCAAGGTAAG+TGG - Chr8:22114314-22114333 MsG0880043291.01.T01:intron 35.0%
! TGGAGCTTTGACATAATTGT+TGG - Chr8:22115879-22115898 MsG0880043291.01.T01:five_prime_UTR 35.0%
! TTAATGCAGTTTCTAGAAGC+AGG - Chr8:22114022-22114041 MsG0880043291.01.T01:intron 35.0%
! TTTGGATTTGTCACTTATCC+GGG - Chr8:22112363-22112382 MsG0880043291.01.T01:intron 35.0%
!! AGTTTCTAGAACCCTTTGAA+AGG + Chr8:22115511-22115530 None:intergenic 35.0%
!! CCATGCTTTTTGATACTTAG+TGG - Chr8:22112861-22112880 MsG0880043291.01.T01:intron 35.0%
!! GAATAGGTTTTATACTGGGA+TGG - Chr8:22113392-22113411 MsG0880043291.01.T01:CDS 35.0%
!! GCTTAAGTAAGCCCTTATTT+TGG - Chr8:22112608-22112627 MsG0880043291.01.T01:intron 35.0%
!! TTTCAAAGGGTTCTAGAAAC+TGG - Chr8:22115510-22115529 MsG0880043291.01.T01:CDS 35.0%
!!! AGTAATTTTTTCCACTGGTG+TGG + Chr8:22111085-22111104 None:intergenic 35.0%
AAAGGAATGCCACCTTTCAA+AGG - Chr8:22115496-22115515 MsG0880043291.01.T01:CDS 40.0%
AAGAAGGAAAAAAGCCTGTC+TGG - Chr8:22115380-22115399 MsG0880043291.01.T01:intron 40.0%
AAGATTCAAAACGCTCCGTT+GGG + Chr8:22111045-22111064 None:intergenic 40.0%
AAGGAATGCCACCTTTCAAA+GGG - Chr8:22115497-22115516 MsG0880043291.01.T01:CDS 40.0%
AAGGAGAGACAAGTGTAGTT+GGG + Chr8:22113472-22113491 None:intergenic 40.0%
AATGCCGTGACAATATAGTC+TGG + Chr8:22113114-22113133 None:intergenic 40.0%
AATTTGTACTGTTCTGTGGG+TGG - Chr8:22115952-22115971 MsG0880043291.01.T01:five_prime_UTR 40.0%
ACTGGGTATTTCTTCATGCA+TGG - Chr8:22114625-22114644 MsG0880043291.01.T01:intron 40.0%
ACTTAGTGGCAGTTAGTAGT+GGG - Chr8:22112875-22112894 MsG0880043291.01.T01:intron 40.0%
AGGAAATGGAGATCTAGTGA+CGG + Chr8:22115823-22115842 None:intergenic 40.0%
AGGTGAAGTGCAAGTTATAC+TGG + Chr8:22112580-22112599 None:intergenic 40.0%
AGTGTAGTTGGGAAAGGAAA+AGG + Chr8:22113461-22113480 None:intergenic 40.0%
ATCGACGAAATCTACACCAA+CGG - Chr8:22111219-22111238 MsG0880043291.01.T01:three_prime_UTR 40.0%
ATGAAGATTGATGGGAGGTT+GGG - Chr8:22111468-22111487 MsG0880043291.01.T01:CDS 40.0%
ATGGTACACACAACTATCTG+TGG + Chr8:22112970-22112989 None:intergenic 40.0%
ATTCAACCAGCCATAAGGTA+GGG + Chr8:22115710-22115729 None:intergenic 40.0%
ATTGGCATGGTAAAGAAGCT+AGG - Chr8:22113321-22113340 MsG0880043291.01.T01:CDS 40.0%
CAAGATGTTGCAACATATGG+AGG - Chr8:22114085-22114104 MsG0880043291.01.T01:intron 40.0%
CATGAATTGGGATTAGGGTT+AGG + Chr8:22111169-22111188 None:intergenic 40.0%
CTAACCCTAATCCCAATTCA+TGG - Chr8:22111167-22111186 MsG0880043291.01.T01:three_prime_UTR 40.0%
CTATTCTCATGGTCTACTAG+GGG - Chr8:22113572-22113591 MsG0880043291.01.T01:intron 40.0%
CTTCCGCAATTTCTTAGAGT+TGG - Chr8:22114266-22114285 MsG0880043291.01.T01:intron 40.0%
GAGAGAATACGCAGTTGTTT+AGG - Chr8:22111436-22111455 MsG0880043291.01.T01:CDS 40.0%
GCATTCAAGACAACTGTTGT+TGG - Chr8:22115150-22115169 MsG0880043291.01.T01:intron 40.0%
GCTCAAGATGTTGCAACATA+TGG - Chr8:22114082-22114101 MsG0880043291.01.T01:intron 40.0%
GCTTACTTAAGCACTCTAGA+AGG + Chr8:22112600-22112619 None:intergenic 40.0%
GGAAAAGGTAAAGCTCCAAT+GGG + Chr8:22113172-22113191 None:intergenic 40.0%
GGAAGTTATTATCGGGTCAA+GGG + Chr8:22113751-22113770 None:intergenic 40.0%
GTGCACTTGCAACATTTGAT+AGG - Chr8:22114113-22114132 MsG0880043291.01.T01:intron 40.0%
GTGTAGATTTCGTCGATCAT+TGG + Chr8:22111216-22111235 None:intergenic 40.0%
GTGTGGAAAAAGGAAGAGAA+GGG + Chr8:22111068-22111087 None:intergenic 40.0%
GTTTCTTTCCGTAATTGGCA+TGG - Chr8:22113308-22113327 MsG0880043291.01.T01:CDS 40.0%
TACTTAGTGGCAGTTAGTAG+TGG - Chr8:22112874-22112893 MsG0880043291.01.T01:intron 40.0%
TATAGGTACTACCCAGTTCT+GGG + Chr8:22114048-22114067 None:intergenic 40.0%
TGATGTAGTGCAATAATCCC+GGG + Chr8:22113622-22113641 None:intergenic 40.0%
TGGAAAAGGTAAAGCTCCAA+TGG + Chr8:22113173-22113192 None:intergenic 40.0%
TGGAAGTTATTATCGGGTCA+AGG + Chr8:22113752-22113771 None:intergenic 40.0%
TTATAGGTACTACCCAGTTC+TGG + Chr8:22114049-22114068 None:intergenic 40.0%
TTGTGATGAAGATTGATGGG+AGG - Chr8:22111463-22111482 MsG0880043291.01.T01:CDS 40.0%
TTGTGCTTACAAGTTCAACC+AGG - Chr8:22115248-22115267 MsG0880043291.01.T01:intron 40.0%
! ACACAAATGGGAGTGTATAC+TGG + Chr8:22115104-22115123 None:intergenic 40.0%
! ATGGGAGTGTATACTGGATA+AGG + Chr8:22115098-22115117 None:intergenic 40.0%
! CTCTAAGAAATTGCGGAAGT+TGG + Chr8:22114265-22114284 None:intergenic 40.0%
! GATCGTAAAGTGTCTCAACA+TGG + Chr8:22115059-22115078 None:intergenic 40.0%
! TAGTTTGGTGGAAATGCACT+GGG - Chr8:22114608-22114627 MsG0880043291.01.T01:intron 40.0%
! TGGGAGTGTATACTGGATAA+GGG + Chr8:22115097-22115116 None:intergenic 40.0%
! TTAGTTTGGTGGAAATGCAC+TGG - Chr8:22114607-22114626 MsG0880043291.01.T01:intron 40.0%
! TTGGATTTGTCACTTATCCG+GGG - Chr8:22112364-22112383 MsG0880043291.01.T01:intron 40.0%
! TTTTCCACTGGTGTGGAAAA+AGG + Chr8:22111078-22111097 None:intergenic 40.0%
!! AAGGGTTCTAGAAACTGGAA+AGG - Chr8:22115515-22115534 MsG0880043291.01.T01:CDS 40.0%
!! AGAGTTGGTACCTGAAGTAA+GGG - Chr8:22114281-22114300 MsG0880043291.01.T01:intron 40.0%
!! GATTTGATTTGAGGTTCCCA+AGG + Chr8:22115011-22115030 None:intergenic 40.0%
!! TAGAGTTGGTACCTGAAGTA+AGG - Chr8:22114280-22114299 MsG0880043291.01.T01:intron 40.0%
!! TTCTAGAACCCTTTGAAAGG+TGG + Chr8:22115508-22115527 None:intergenic 40.0%
!! TTTTGCCGCTTATAAAGGGA+GGG - Chr8:22111881-22111900 MsG0880043291.01.T01:CDS 40.0%
AACCTACAGCACAACTCATG+AGG + Chr8:22112802-22112821 None:intergenic 45.0%
AACCTCATGAGTTGTGCTGT+AGG - Chr8:22112797-22112816 MsG0880043291.01.T01:intron 45.0%
AGATGGAGCAGAAGAAAGAG+AGG - Chr8:22111538-22111557 MsG0880043291.01.T01:CDS 45.0%
AGATTCAAAACGCTCCGTTG+GGG + Chr8:22111044-22111063 None:intergenic 45.0%
AGATTTCCCTACCTTATGGC+TGG - Chr8:22115701-22115720 MsG0880043291.01.T01:CDS 45.0%
AGTAAGCTTCGATGTCGAGT+TGG + Chr8:22111299-22111318 None:intergenic 45.0%
ATAGTTGTGTGGCTCGAGAA+AGG - Chr8:22112941-22112960 MsG0880043291.01.T01:intron 45.0%
ATGCACGACATGCAGATCAA+AGG - Chr8:22115478-22115497 MsG0880043291.01.T01:CDS 45.0%
CAGGTCGAACAAAGATCATG+CGG - Chr8:22111331-22111350 MsG0880043291.01.T01:three_prime_UTR 45.0%
CCATGTTCTGTGAACTTCTG+AGG - Chr8:22112986-22113005 MsG0880043291.01.T01:intron 45.0%
CCTCAGAAGTTCACAGAACA+TGG + Chr8:22112989-22113008 None:intergenic 45.0%
CCTTGATTCAACCAGCCATA+AGG + Chr8:22115715-22115734 None:intergenic 45.0%
CCTTTCCCTCCCTTTATAAG+CGG + Chr8:22111889-22111908 None:intergenic 45.0%
CGCTTATAAAGGGAGGGAAA+GGG - Chr8:22111887-22111906 MsG0880043291.01.T01:CDS 45.0%
CTATGTTAACAAGGCAGAGC+AGG - Chr8:22113716-22113735 MsG0880043291.01.T01:intron 45.0%
CTCTAGATTTGCCAATCCTG+CGG + Chr8:22113787-22113806 None:intergenic 45.0%
GAACAAGAGCAAGAACGCTA+CGG - Chr8:22111368-22111387 MsG0880043291.01.T01:three_prime_UTR 45.0%
GAAGATTCAAAACGCTCCGT+TGG + Chr8:22111046-22111065 None:intergenic 45.0%
GAAGGAGAGACAAGTGTAGT+TGG + Chr8:22113473-22113492 None:intergenic 45.0%
GAGACAAGTGTAGTTGGGAA+AGG + Chr8:22113467-22113486 None:intergenic 45.0%
GATGAAGATTGATGGGAGGT+TGG - Chr8:22111467-22111486 MsG0880043291.01.T01:CDS 45.0%
GATTCAACCAGCCATAAGGT+AGG + Chr8:22115711-22115730 None:intergenic 45.0%
GCGTCCATGAATTGGGATTA+GGG + Chr8:22111174-22111193 None:intergenic 45.0%
GGAAAGGAAAAGGAGAAAGC+AGG + Chr8:22113451-22113470 None:intergenic 45.0%
GGAAATGGAGATCTAGTGAC+GGG + Chr8:22115822-22115841 None:intergenic 45.0%
GGTGTGGAAAAAGGAAGAGA+AGG + Chr8:22111069-22111088 None:intergenic 45.0%
GGTTATGTATGTAGCTCGAG+AGG - Chr8:22112896-22112915 MsG0880043291.01.T01:intron 45.0%
GTCTTCTGCGTCCATGAATT+GGG + Chr8:22111181-22111200 None:intergenic 45.0%
GTGCTCTCAAGCTGGAAATT+TGG - Chr8:22113034-22113053 MsG0880043291.01.T01:intron 45.0%
TAGTTGTGTGGCTCGAGAAA+GGG - Chr8:22112942-22112961 MsG0880043291.01.T01:intron 45.0%
TGAAACTGTTGGATCTGTGC+AGG - Chr8:22115425-22115444 MsG0880043291.01.T01:intron 45.0%
TGCGCACGTCCAAATAACTT+TGG - Chr8:22115319-22115338 MsG0880043291.01.T01:intron 45.0%
TGCGTCCATGAATTGGGATT+AGG + Chr8:22111175-22111194 None:intergenic 45.0%
TTCGTCGATCATTGGGTTTG+AGG + Chr8:22111208-22111227 None:intergenic 45.0%
! ATTCCAGACAGGAAGCATAG+TGG + Chr8:22114987-22115006 None:intergenic 45.0%
! CCTTATGGCTGGTTGAATCA+AGG - Chr8:22115712-22115731 MsG0880043291.01.T01:CDS 45.0%
! CTTCCTGTCTGGAATACCTT+GGG - Chr8:22114992-22115011 MsG0880043291.01.T01:intron 45.0%
! GAGGGGTATGAGATGGATTT+GGG - Chr8:22111492-22111511 MsG0880043291.01.T01:CDS 45.0%
! GGTATGAGATGGATTTGGGT+TGG - Chr8:22111496-22111515 MsG0880043291.01.T01:CDS 45.0%
! TCTTCCTTTTTCCACACCAG+TGG - Chr8:22111071-22111090 MsG0880043291.01.T01:three_prime_UTR 45.0%
! TGAGGGGTATGAGATGGATT+TGG - Chr8:22111491-22111510 MsG0880043291.01.T01:CDS 45.0%
! TGGATTTGTCACTTATCCGG+GGG - Chr8:22112365-22112384 MsG0880043291.01.T01:intron 45.0%
!! ATGGATTTGGGTTGGTGTGA+TGG - Chr8:22111504-22111523 MsG0880043291.01.T01:CDS 45.0%
!! GTATAAGCTTGCTGCTCGAA+AGG - Chr8:22113815-22113834 MsG0880043291.01.T01:intron 45.0%
!! GTTTTGCCGCTTATAAAGGG+AGG - Chr8:22111880-22111899 MsG0880043291.01.T01:CDS 45.0%
!! TGGATTTGGGTTGGTGTGAT+GGG - Chr8:22111505-22111524 MsG0880043291.01.T01:CDS 45.0%
!!! AATATTTTTATTCTTATTTT+TGG + Chr8:22113363-22113382 None:intergenic 5.0%
ATTGATGGGAGGTTGGGTGA+GGG - Chr8:22111474-22111493 MsG0880043291.01.T01:CDS 50.0%
CCGCTTATAAAGGGAGGGAA+AGG - Chr8:22111886-22111905 MsG0880043291.01.T01:CDS 50.0%
CGTCTTCTGCGTCCATGAAT+TGG + Chr8:22111182-22111201 None:intergenic 50.0%
GACGAAATCTACACCAACGG+CGG - Chr8:22111222-22111241 MsG0880043291.01.T01:three_prime_UTR 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG + Chr8:22113847-22113866 None:intergenic 50.0%
GCAATTGAGTGCTCTCAAGC+TGG - Chr8:22113026-22113045 MsG0880043291.01.T01:intron 50.0%
GCTTACTCCTCTCTCTACTC+AGG - Chr8:22111312-22111331 MsG0880043291.01.T01:three_prime_UTR 50.0%
GGCATGGTAAAGAAGCTAGG+CGG - Chr8:22113324-22113343 MsG0880043291.01.T01:CDS 50.0%
TGATGGGGTTGAGAGGAAGA+TGG - Chr8:22111521-22111540 MsG0880043291.01.T01:CDS 50.0%
TGTTCGACCTGAGTAGAGAG+AGG + Chr8:22111322-22111341 None:intergenic 50.0%
! ACGGTTGGTACGGTTGTTGT+CGG + Chr8:22111256-22111275 None:intergenic 50.0%
! CGCAGGATTGGCAAATCTAG+AGG - Chr8:22113785-22113804 MsG0880043291.01.T01:intron 50.0%
! GAGGTGTTCAAGTTCCAGAC+AGG + Chr8:22115397-22115416 None:intergenic 50.0%
! GCTTCCTGTCTGGAATACCT+TGG - Chr8:22114991-22115010 MsG0880043291.01.T01:intron 50.0%
! GGATTTGTCACTTATCCGGG+GGG - Chr8:22112366-22112385 MsG0880043291.01.T01:intron 50.0%
! GTTCCCAAGGTATTCCAGAC+AGG + Chr8:22114998-22115017 None:intergenic 50.0%
! TAGCTCGAGAGGCATAGAGT+TGG - Chr8:22112907-22112926 MsG0880043291.01.T01:intron 50.0%
!! AAGCTTGCTGCTCGAAAGGT+TGG - Chr8:22113819-22113838 MsG0880043291.01.T01:intron 50.0%
!! GGATTTGGGTTGGTGTGATG+GGG - Chr8:22111506-22111525 MsG0880043291.01.T01:CDS 50.0%
AACCGTCGCGCAATCATGAG+CGG - Chr8:22111270-22111289 MsG0880043291.01.T01:three_prime_UTR 55.0%
CAGCCACTATGCTTCCTGTC+TGG - Chr8:22114981-22115000 MsG0880043291.01.T01:intron 55.0%
CTAGAAGCAGGCCCAGAACT+GGG - Chr8:22114034-22114053 MsG0880043291.01.T01:intron 55.0%
GATTGATGGGAGGTTGGGTG+AGG - Chr8:22111473-22111492 MsG0880043291.01.T01:CDS 55.0%
TCTAGAAGCAGGCCCAGAAC+TGG - Chr8:22114033-22114052 MsG0880043291.01.T01:intron 55.0%
TTGATGGGAGGTTGGGTGAG+GGG - Chr8:22111475-22111494 MsG0880043291.01.T01:CDS 55.0%
! GTTGGGTGAGGGGTATGAGA+TGG - Chr8:22111485-22111504 MsG0880043291.01.T01:CDS 55.0%
! GTTGGTGTGATGGGGTTGAG+AGG - Chr8:22111514-22111533 MsG0880043291.01.T01:CDS 55.0%
! TGATTGCGCGACGGTTGGTA+CGG + Chr8:22111266-22111285 None:intergenic 55.0%
GAAGCTCGACGCGCTTCGAT+TGG - Chr8:22111392-22111411 MsG0880043291.01.T01:exon 60.0%
GCTCATGATTGCGCGACGGT+TGG + Chr8:22111271-22111290 None:intergenic 60.0%
CGCCGCTCATGATTGCGCGA+CGG + Chr8:22111275-22111294 None:intergenic 65.0%
GCTACGATGCGCCGCAGGAT+TGG - Chr8:22113773-22113792 MsG0880043291.01.T01:intron 65.0%
TCCAAGCTACGATGCGCCGC+AGG - Chr8:22113768-22113787 MsG0880043291.01.T01:intron 65.0%
TCCTGCGGCGCATCGTAGCT+TGG + Chr8:22113772-22113791 None:intergenic 65.0%
! ACGGTCTGCAAAGTGCCCCC+CGG + Chr8:22112384-22112403 None:intergenic 65.0%
!! GGGGGCACTTTGCAGACCGT+TGG - Chr8:22112384-22112403 MsG0880043291.01.T01:intron 65.0%
GTCGGCGTCGTCACCGCCGT+TGG + Chr8:22111238-22111257 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 22111039 22115978 22111039 ID=MsG0880043291.01;Name=MsG0880043291.01
Chr8 mRNA 22111039 22115978 22111039 ID=MsG0880043291.01.T01;Parent=MsG0880043291.01;Name=MsG0880043291.01.T01;_AED=0.45;_eAED=0.45;_QI=147|0.75|1|1|1|1|5|355|406
Chr8 exon 22111039 22111570 22111039 ID=MsG0880043291.01.T01:exon:4597;Parent=MsG0880043291.01.T01
Chr8 exon 22111799 22112033 22111799 ID=MsG0880043291.01.T01:exon:4596;Parent=MsG0880043291.01.T01
Chr8 exon 22112689 22112774 22112689 ID=MsG0880043291.01.T01:exon:4595;Parent=MsG0880043291.01.T01
Chr8 exon 22113181 22113501 22113181 ID=MsG0880043291.01.T01:exon:4594;Parent=MsG0880043291.01.T01
Chr8 exon 22115430 22115978 22115430 ID=MsG0880043291.01.T01:exon:4593;Parent=MsG0880043291.01.T01
Chr8 five_prime_UTR 22115832 22115978 22115832 ID=MsG0880043291.01.T01:five_prime_utr;Parent=MsG0880043291.01.T01
Chr8 CDS 22115430 22115831 22115430 ID=MsG0880043291.01.T01:cds;Parent=MsG0880043291.01.T01
Chr8 CDS 22113181 22113501 22113181 ID=MsG0880043291.01.T01:cds;Parent=MsG0880043291.01.T01
Chr8 CDS 22112689 22112774 22112689 ID=MsG0880043291.01.T01:cds;Parent=MsG0880043291.01.T01
Chr8 CDS 22111799 22112033 22111799 ID=MsG0880043291.01.T01:cds;Parent=MsG0880043291.01.T01
Chr8 CDS 22111394 22111570 22111394 ID=MsG0880043291.01.T01:cds;Parent=MsG0880043291.01.T01
Chr8 three_prime_UTR 22111039 22111393 22111039 ID=MsG0880043291.01.T01:three_prime_utr;Parent=MsG0880043291.01.T01
Gene Sequence

>MsG0880043291.01.T01

ATGGACGCAGAAGACGAAACCTCAAACCCAATGATCGACGAAATCTACACCAACGGCGGTGACGACGCCGACAACAACCGTACCAACCGTCGCGCAATCATGAGCGGCGACCAACTCGACATCGAAGCTTACTCCTCTCTCTACTCAGGTCGAACAAAGATCATGCGGTTACTCTTCATCGCGAACAAGAGCAAGAACGCTACGGTGAAGCTCGACGCGCTTCGATTGGCGTATGATGAGATTAAGAAAGGAGAGAATACGCAGTTGTTTAGGGAAGTTGTGATGAAGATTGATGGGAGGTTGGGTGAGGGGTATGAGATGGATTTGGGTTGGTGTGATGGGGTTGAGAGGAAGATGGAGCAGAAGAAAGAGAGGCTTGAGAATGAGCTTAATGCTTATAGGACAAACTTAATTAAAGAAAGCATACGAATGGGATACAATGATTTTGGAGACTTTTACTATTCTCATGGTCTACTAGGGGATGCTTTTAAAAGTTATGTTCGTACCCGGGATTATTGCACTACATCAAAGCATATAATTCATATGTGTTTGAGTACAATTCTAGTCAGCATTGAGATGGGTCAATTTTCTCATGTCTCAAGCTATGTTAACAAGGCAGAGCAGGCAACTGATGCCCTTGACCCGATAATAACTTCCAAGCTACGATGCGCCGCAGGATTGGCAAATCTAGAGGCTAAAAAGTATAAGCTTGCTGCTCGAAAGAGTAAAGTTATAGACAATTCCAACTTCCGCAATTTCTTAGAGTTGGTACCTGAAGTAAGGGAACTGATAAATGACTTTTACTCAAGCCACTATGCTTCCTGTCTGGAATACCTTGGGAACCTCAAATCAAATCTGTCGCTGGATATACATTTGCATGACCATGTTGAGACACTTTACGATCAAATTCGTCACAAAGCCCTTATCCAGTATACACTCCCATTTGTGTCTGTTGATTTGAATATGATGGCTAATGCATTCAAGACAACTGTTGTTGGAATTGAGAAAGAACTCGAAGCATTGATTACTGATAATCAAATACAGGCTCGAATTGATTCACACAATAAAATATTGTATGCACGACATGCAGATCAAAGGAATGCCACCTTTCAAAGGGTTCTAGAAACTGGAAAGGAGTTTGATCGTGATGTTCGTGCCATGTTGCTGAGATCAAATCTTATTAAACATGACTTCAATATTAGGGCATCAAGGAAACTTTGA

Protein sequence

>MsG0880043291.01.T01

MDAEDETSNPMIDEIYTNGGDDADNNRTNRRAIMSGDQLDIEAYSSLYSGRTKIMRLLFIANKSKNATVKLDALRLAYDEIKKGENTQLFREVVMKIDGRLGEGYEMDLGWCDGVERKMEQKKERLENELNAYRTNLIKESIRMGYNDFGDFYYSHGLLGDAFKSYVRTRDYCTTSKHIIHMCLSTILVSIEMGQFSHVSSYVNKAEQATDALDPIITSKLRCAAGLANLEAKKYKLAARKSKVIDNSNFRNFLELVPEVRELINDFYSSHYASCLEYLGNLKSNLSLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLNMMANAFKTTVVGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLETGKEFDRDVRAMLLRSNLIKHDFNIRASRKL*