AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030732.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030732.01.T01 MTR_1g069170 83.051 118 20 0 177 294 80 197 1.67e-69 214
MsG0680030732.01.T01 MTR_3g098240 78.571 126 27 0 169 294 634 759 1.42e-62 211
MsG0680030732.01.T01 MTR_6g011530 77.941 136 12 1 1 118 1 136 7.13e-61 195
MsG0680030732.01.T01 MTR_6g011530 83.333 48 8 0 111 158 231 278 9.75e-19 84.3
MsG0680030732.01.T01 MTR_7g098630 80.172 116 23 0 179 294 759 874 1.41e-58 201
MsG0680030732.01.T01 MTR_3g074080 68.613 137 38 2 159 294 253 385 1.32e-56 187
MsG0680030732.01.T01 MTR_5g010022 61.111 126 37 1 180 293 1 126 7.30e-46 151
MsG0680030732.01.T01 MTR_7g009710 57.554 139 38 2 1 118 1 139 1.39e-40 142
MsG0680030732.01.T01 MTR_1g041400 53.043 115 51 1 180 291 1 115 5.67e-34 120
MsG0680030732.01.T01 MTR_0027s0100 57.143 105 42 1 190 291 11 115 8.07e-34 120
MsG0680030732.01.T01 MTR_2g036710 52.137 117 53 1 180 293 1 117 3.50e-33 118
MsG0680030732.01.T01 MTR_5g084110 49.573 117 56 1 180 293 1 117 1.58e-31 114
MsG0680030732.01.T01 MTR_5g060960 53.000 100 44 1 180 276 1 100 3.41e-30 111
MsG0680030732.01.T01 MTR_1g107415 60.440 91 31 2 207 292 2 92 3.46e-28 104
MsG0680030732.01.T01 MTR_7g114490 82.258 62 7 1 172 233 428 485 6.48e-25 104
MsG0680030732.01.T01 MTR_2g041160 53.763 93 39 2 204 293 12 103 2.87e-24 94.7
MsG0680030732.01.T01 MTR_2g066020 46.875 96 48 1 180 272 1 96 4.30e-23 92.8
MsG0680030732.01.T01 MTR_3g051500 71.667 60 14 1 180 239 1 57 1.79e-22 89.0
MsG0680030732.01.T01 MTR_1g059100 45.614 114 54 3 180 290 1 109 1.84e-22 90.1
MsG0680030732.01.T01 MTR_7g073160 45.918 98 53 0 180 277 1 98 2.77e-22 90.1
MsG0680030732.01.T01 MTR_7g033715 43.103 116 58 3 180 292 1 111 7.33e-22 88.6
MsG0680030732.01.T01 MTR_6g048400 42.735 117 42 3 180 293 1 95 1.94e-20 84.3
MsG0680030732.01.T01 MTR_4g080860 70.370 54 16 0 177 230 34 87 2.43e-20 84.0
MsG0680030732.01.T01 MTR_5g039040 47.436 78 41 0 180 257 1 78 4.14e-20 84.0
MsG0680030732.01.T01 MTR_3g108930 44.954 109 50 4 186 290 8 110 1.75e-19 82.4
MsG0680030732.01.T01 MTR_7g086380 37.681 138 61 5 20 135 23 157 6.33e-19 85.1
MsG0680030732.01.T01 MTR_4g066510 44.231 104 50 3 190 290 30 128 4.03e-18 79.0
MsG0680030732.01.T01 MTR_4g012720 85.714 42 6 0 178 219 49 90 1.05e-17 77.0
MsG0680030732.01.T01 MTR_7g026310 66.667 51 17 0 180 230 1 51 1.29e-17 75.5
MsG0680030732.01.T01 MTR_2g017910 42.609 115 48 3 180 291 1 100 3.45e-16 73.2
MsG0680030732.01.T01 MTR_3g437460 36.066 122 72 3 173 290 2 121 7.46e-16 73.6
MsG0680030732.01.T01 MTR_3g029630 38.400 125 69 5 171 290 19 140 1.48e-15 73.2
MsG0680030732.01.T01 MTR_2g069230 38.793 116 62 3 180 292 1 110 6.63e-15 70.5
MsG0680030732.01.T01 MTR_1g037680 75.000 44 11 0 180 223 1 44 8.71e-15 71.6
MsG0680030732.01.T01 MTR_4g080083 40.196 102 37 3 41 118 5 106 1.55e-14 71.2
MsG0680030732.01.T01 MTR_2g084225 40.594 101 37 3 41 118 5 105 1.92e-14 71.6
MsG0680030732.01.T01 MTR_4g080083 40.196 102 37 3 41 118 5 106 2.36e-14 71.6
MsG0680030732.01.T01 MTR_1g029660 40.196 102 57 2 190 287 17 118 1.17e-13 67.4
MsG0680030732.01.T01 MTR_3g096620 40.196 102 57 2 190 287 17 118 2.67e-13 66.6
MsG0680030732.01.T01 MTR_5g065400 37.736 106 63 2 190 292 17 122 1.27e-12 63.9
MsG0680030732.01.T01 MTR_4g098830 39.216 102 58 2 190 287 17 118 1.39e-12 65.5
MsG0680030732.01.T01 MTR_7g008890 39.623 106 60 2 191 292 18 123 1.86e-12 63.9
MsG0680030732.01.T01 MTR_1g086160 39.806 103 57 3 190 288 38 139 3.50e-12 63.5
MsG0680030732.01.T01 MTR_1g023550 41.111 90 49 2 205 290 29 118 5.21e-12 62.8
MsG0680030732.01.T01 MTR_5g055660 41.304 92 50 2 205 292 33 124 5.24e-12 62.8
MsG0680030732.01.T01 MTR_1g031920 38.298 94 53 3 194 283 3 95 1.01e-11 60.8
MsG0680030732.01.T01 MTR_2g096600 42.857 84 45 3 186 267 13 95 1.75e-11 60.8
MsG0680030732.01.T01 MTR_2g083240 36.190 105 63 2 190 290 17 121 1.93e-11 61.2
MsG0680030732.01.T01 MTR_2g016230 31.481 108 43 3 38 118 1 104 2.09e-11 63.2
MsG0680030732.01.T01 MTR_6g027730 49.123 57 28 1 79 135 23 78 4.10e-11 61.6
MsG0680030732.01.T01 MTR_6g059370 45.714 70 37 1 193 261 42 111 5.97e-11 59.3
MsG0680030732.01.T01 MTR_1g046190 41.558 77 44 1 186 261 13 89 6.84e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030732.01.T01 AT5G39890 39.024 164 75 5 1 140 1 163 2.47e-28 109
MsG0680030732.01.T01 AT5G39890 39.024 164 75 5 1 140 1 163 3.46e-28 110
MsG0680030732.01.T01 AT5G15120 40.411 146 58 4 41 159 58 201 1.02e-25 103
MsG0680030732.01.T01 AT2G42670 36.957 138 53 6 41 149 5 137 6.36e-17 79.0
MsG0680030732.01.T01 AT2G42670 37.302 126 46 5 41 138 5 125 1.32e-16 77.8
MsG0680030732.01.T01 AT3G58670 36.154 130 49 6 41 142 5 128 1.39e-14 72.4
MsG0680030732.01.T01 AT3G58670 36.154 130 49 6 41 142 5 128 1.39e-14 72.4
MsG0680030732.01.T01 AT3G58670 36.154 130 49 6 41 142 5 128 1.39e-14 72.4
MsG0680030732.01.T01 AT1G18490 32.667 150 65 5 20 136 10 156 3.29e-14 71.6
MsG0680030732.01.T01 AT3G58670 50.820 61 28 2 82 142 27 85 1.66e-12 65.5

Find 77 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACCCTCCTTGTGTCTC+TGG 0.215220 6:-8211099 None:intergenic
TAAACATTCCTTTCCTCTTC+TGG 0.218650 6:-8208659 None:intergenic
AAAACGTGACGAGCATGTTT+TGG 0.239423 6:+8211195 MsG0680030732.01.T01:CDS
TGCACCCTCCTTGTGTCTCT+GGG 0.300951 6:-8211098 None:intergenic
AATGTGCAAGTATGTAATTT+TGG 0.322025 6:-8206758 None:intergenic
TGTCTCTGGGGTTGAGTGCT+TGG 0.333138 6:-8211085 None:intergenic
CTGTTAGTAATTGTTTCCTT+TGG 0.343483 6:-8205031 None:intergenic
TTATAGATTCTTGACCTTAG+AGG 0.361380 6:+8210045 MsG0680030732.01.T01:CDS
CCTAACTAATGACGATCTTC+TGG 0.369619 6:-8211299 None:intergenic
ACTCTCCCCTCGTCGAGCTT+TGG 0.380245 6:-8211140 None:intergenic
AAGGAAGTCTTTGCTAATAG+TGG 0.389136 6:+8205121 MsG0680030732.01.T01:CDS
TGCTAACTCTCCACAATAGT+TGG 0.397487 6:-8208746 None:intergenic
ATTCCTTTCCTCTTCTGGTA+TGG 0.419126 6:-8208654 None:intergenic
AAAAGGTGGAAGAGAAGAAT+AGG 0.434183 6:+8210074 MsG0680030732.01.T01:CDS
AACCTCAGAGGTTGAAGGTT+CGG 0.447345 6:+8211012 MsG0680030732.01.T01:CDS
GTCTTTGCTAATAGTGGGAC+AGG 0.450153 6:+8205127 MsG0680030732.01.T01:CDS
TATAGATTCTTGACCTTAGA+GGG 0.460768 6:+8210046 MsG0680030732.01.T01:CDS
CATATCGATCCACTGGAACT+TGG 0.461015 6:-8211225 None:intergenic
CTTGGTTGAATTCATTCAGT+TGG 0.462726 6:-8211067 None:intergenic
TTATGAGTGTGAGAAATTCT+CGG 0.469187 6:+8206780 MsG0680030732.01.T01:CDS
GACCTTAGAGGGACATGAAA+AGG 0.473700 6:+8210057 MsG0680030732.01.T01:CDS
AAGATTTAAAAGTGGAAGGA+AGG 0.477593 6:+8208711 MsG0680030732.01.T01:CDS
AGAACCTTAGCTGATAGAAA+AGG 0.486526 6:+8204989 MsG0680030732.01.T01:CDS
GCATCTTCTTCTGACGCCGC+CGG 0.489872 6:-8205069 None:intergenic
TGCCTTCATGTAACGTTAAG+AGG 0.492766 6:+8211035 MsG0680030732.01.T01:CDS
TTATGAATGGCTACAAGAAA+AGG 0.495196 6:+8208679 MsG0680030732.01.T01:CDS
CAAGGAGGGTGCAAAATGTT+CGG 0.498709 6:+8211108 MsG0680030732.01.T01:CDS
AGGAAAGGAATGTTTATGAA+TGG 0.504362 6:+8208666 MsG0680030732.01.T01:CDS
ACAGCAGGTCAAGGAGGAAC+CGG 0.506872 6:+8205050 MsG0680030732.01.T01:CDS
AGGAATTGTCCCACCAGCTC+AGG 0.513462 6:+8205147 MsG0680030732.01.T01:CDS
CTTGAAGATTTAAAAGTGGA+AGG 0.530635 6:+8208707 MsG0680030732.01.T01:CDS
AACTTATCAATGTCCTGAGC+TGG 0.532617 6:-8205160 None:intergenic
AGGGGAGAGTATCATTCACT+TGG 0.547970 6:+8211153 MsG0680030732.01.T01:CDS
CCAACTTGAAGATTTAAAAG+TGG 0.556946 6:+8208703 MsG0680030732.01.T01:CDS
AGGAAGTCTTTGCTAATAGT+GGG 0.558450 6:+8205122 MsG0680030732.01.T01:CDS
TTATCAATGTCCTGAGCTGG+TGG 0.560783 6:-8205157 None:intergenic
GTACAGTGGTCCAACTATTG+TGG 0.561081 6:+8208736 MsG0680030732.01.T01:CDS
AGGAAACAATTACTAACAGC+AGG 0.568362 6:+8205035 MsG0680030732.01.T01:CDS
TGTAGATTTGAAGCAATGGC+CGG 0.571601 6:+8210954 MsG0680030732.01.T01:intron
CGGAGAACCTCAGAGGTTGA+AGG 0.572165 6:+8211007 MsG0680030732.01.T01:CDS
CTCAGGACATTGATAAGTTG+CGG 0.580370 6:+8205164 MsG0680030732.01.T01:CDS
GGGAGCACACCAAGTTCCAG+TGG 0.584194 6:+8211216 MsG0680030732.01.T01:CDS
TCACTCGCATATCGATCCAC+TGG 0.584359 6:-8211232 None:intergenic
AGGGCAATGCATCTCACAGA+AGG 0.585599 6:+8206735 MsG0680030732.01.T01:intron
TGTAACGTTAAGAGGTCTCA+AGG 0.591819 6:+8211043 MsG0680030732.01.T01:CDS
GACCTCTTAACGTTACATGA+AGG 0.591871 6:-8211037 None:intergenic
ATTGTGTAGATTTGAAGCAA+TGG 0.592362 6:+8210950 MsG0680030732.01.T01:intron
AGGACTATCCATACCAGAAG+AGG 0.597067 6:+8208646 MsG0680030732.01.T01:CDS
CACTCAACCCCAGAGACACA+AGG 0.604441 6:+8211090 MsG0680030732.01.T01:CDS
TATCCATACCAGAAGAGGAA+AGG 0.605568 6:+8208651 MsG0680030732.01.T01:CDS
GCACCCTCCTTGTGTCTCTG+GGG 0.618997 6:-8211097 None:intergenic
TGTAGAGGAATAACACCAGA+AGG 0.622496 6:-8207200 None:intergenic
GTAGATTTGAAGCAATGGCC+GGG 0.623828 6:+8210955 MsG0680030732.01.T01:intron
TGCATGAACGTCGATCCACC+CGG 0.632107 6:-8210973 None:intergenic
GACGTTCATGCAGAATTCAA+CGG 0.633403 6:+8210984 MsG0680030732.01.T01:CDS
CAATTACTAACAGCAGGTCA+AGG 0.634321 6:+8205041 MsG0680030732.01.T01:CDS
GAGAGTATCATTCACTTGGG+TGG 0.635578 6:+8211157 MsG0680030732.01.T01:CDS
GCGTCAGAAGAAGATGCCGC+CGG 0.640523 6:+8205075 MsG0680030732.01.T01:CDS
ATTCCAGGGTGATTATGTAG+AGG 0.643712 6:-8207215 None:intergenic
AACTAATGACGATCTTCTGG+CGG 0.645526 6:-8211296 None:intergenic
AAACATCCAAAGCTCGACGA+GGG 0.652509 6:+8211134 MsG0680030732.01.T01:CDS
CTTAGAGGGACATGAAAAGG+TGG 0.652975 6:+8210060 MsG0680030732.01.T01:CDS
GGGGAGAGTATCATTCACTT+GGG 0.655440 6:+8211154 MsG0680030732.01.T01:CDS
CACCGAACCTTCAACCTCTG+AGG 0.664090 6:-8211014 None:intergenic
AACATCCAAAGCTCGACGAG+GGG 0.665313 6:+8211135 MsG0680030732.01.T01:CDS
TAAACATCCAAAGCTCGACG+AGG 0.676211 6:+8211133 MsG0680030732.01.T01:CDS
TATCAATGTCCTGAGCTGGT+GGG 0.678123 6:-8205156 None:intergenic
GCAGGTCAAGGAGGAACCGG+CGG 0.678543 6:+8205053 MsG0680030732.01.T01:CDS
CAACCCCAGAGACACAAGGA+GGG 0.690758 6:+8211094 MsG0680030732.01.T01:CDS
ATTCCTCTACATAATCACCC+TGG 0.691462 6:+8207212 MsG0680030732.01.T01:CDS
AGAGGAATAACACCAGAAGG+TGG 0.695453 6:-8207197 None:intergenic
GATTTGAAGCAATGGCCGGG+TGG 0.705473 6:+8210958 MsG0680030732.01.T01:intron
TCAACGGCGGAGAACCTCAG+AGG 0.709305 6:+8211000 MsG0680030732.01.T01:CDS
TTACTAACAGCAGGTCAAGG+AGG 0.728299 6:+8205044 MsG0680030732.01.T01:CDS
TCAACCCCAGAGACACAAGG+AGG 0.738703 6:+8211093 MsG0680030732.01.T01:CDS
GTGGAAGGAAGGATGTACAG+TGG 0.744882 6:+8208722 MsG0680030732.01.T01:CDS
GTTCATGCAGAATTCAACGG+CGG 0.781150 6:+8210987 MsG0680030732.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAAAAATAAAATA+TGG - Chr6:8207098-8207117 None:intergenic 0.0%
!! ATTCAAATATCTAAATAATT+AGG - Chr6:8210827-8210846 None:intergenic 10.0%
!!! ATTAGATTTTTTTAGATTTA+AGG + Chr6:8210740-8210759 MsG0680030732.01.T01:intron 10.0%
!!! ATTTATTTTCTCAATTATTT+TGG + Chr6:8205384-8205403 MsG0680030732.01.T01:intron 10.0%
!! AAAATGATAACATCAAAAAT+TGG - Chr6:8205769-8205788 None:intergenic 15.0%
!! AGATATTATTAAAGTTTATG+TGG - Chr6:8208596-8208615 None:intergenic 15.0%
!! ATATGATGTTTAATAAGAAA+TGG + Chr6:8206831-8206850 MsG0680030732.01.T01:intron 15.0%
!! ATATTATTAAAGTTTATGTG+GGG - Chr6:8208594-8208613 None:intergenic 15.0%
!! ATTATATATTATATATTCCG+AGG + Chr6:8205927-8205946 MsG0680030732.01.T01:intron 15.0%
!! CAAAATCATAAAATATACAA+AGG - Chr6:8207499-8207518 None:intergenic 15.0%
!! GATATGAAACATAAAAAAAA+AGG - Chr6:8206139-8206158 None:intergenic 15.0%
!! GATATTATTAAAGTTTATGT+GGG - Chr6:8208595-8208614 None:intergenic 15.0%
!!! AATAGCATTTTTTCTATTTT+AGG - Chr6:8207460-8207479 None:intergenic 15.0%
!!! ATGAACTATAGTTTTAAATT+AGG - Chr6:8207717-8207736 None:intergenic 15.0%
!!! ATTGTTTTTATGTTGATAAT+TGG + Chr6:8205237-8205256 MsG0680030732.01.T01:intron 15.0%
!!! CTTTATTATTGTACTTTTTT+TGG + Chr6:8208899-8208918 MsG0680030732.01.T01:intron 15.0%
!!! GTTATTGTTATTATTGTTTT+CGG + Chr6:8205441-8205460 MsG0680030732.01.T01:intron 15.0%
!!! TAAGGTTTGTTTAATTTTTT+TGG + Chr6:8210758-8210777 MsG0680030732.01.T01:intron 15.0%
!!! TGAACTATAGTTTTAAATTA+GGG - Chr6:8207716-8207735 None:intergenic 15.0%
!!! TGTCTAAAGTAAATTAATTA+AGG + Chr6:8210173-8210192 MsG0680030732.01.T01:intron 15.0%
!!! TTATTGTTATTATTGTTTTC+GGG + Chr6:8205442-8205461 MsG0680030732.01.T01:intron 15.0%
!!! TTTATGTTTCTATAATAGAA+TGG - Chr6:8209765-8209784 None:intergenic 15.0%
!! AAAATATCAAACACAAGAAA+CGG - Chr6:8205642-8205661 None:intergenic 20.0%
!! AAACTAAAATATATATCTCG+TGG - Chr6:8206009-8206028 None:intergenic 20.0%
!! AACTAAAATATATATCTCGT+GGG - Chr6:8206008-8206027 None:intergenic 20.0%
!! AATTTAATTATATGAGTGCA+TGG - Chr6:8209740-8209759 None:intergenic 20.0%
!! ACACATTAAAAATGTGTATA+AGG - Chr6:8207152-8207171 None:intergenic 20.0%
!! ACTATTTCAAAATATACTAG+TGG - Chr6:8209222-8209241 None:intergenic 20.0%
!! ATAACAAACTTCTATATTGA+TGG - Chr6:8209006-8209025 None:intergenic 20.0%
!! ATTTAATGTTAAGGAAAGTA+CGG + Chr6:8207661-8207680 MsG0680030732.01.T01:intron 20.0%
!! CAAATGTCAATAAATAACAA+TGG + Chr6:8206276-8206295 MsG0680030732.01.T01:intron 20.0%
!! GTATTTAATATGTCTAACTT+AGG - Chr6:8207426-8207445 None:intergenic 20.0%
!! TAAATGTTGTATGTTGTATA+AGG + Chr6:8209614-8209633 MsG0680030732.01.T01:intron 20.0%
!!! AGAATGATTTATTTTCATTG+AGG + Chr6:8209683-8209702 MsG0680030732.01.T01:intron 20.0%
!!! ATTTTACCATGAATACTATT+GGG + Chr6:8205784-8205803 MsG0680030732.01.T01:intron 20.0%
!!! ATTTTAGAGAAAATTTTACC+TGG - Chr6:8208005-8208024 None:intergenic 20.0%
!!! ATTTTGTCTTTTTTTTCTGT+AGG - Chr6:8208840-8208859 None:intergenic 20.0%
!!! GATTCAAACTTTAGAAAATT+AGG + Chr6:8208209-8208228 MsG0680030732.01.T01:intron 20.0%
!!! TATTGTTATTATTGTTTTCG+GGG + Chr6:8205443-8205462 MsG0680030732.01.T01:intron 20.0%
!!! TTCATTATATTTGAGATGTA+AGG + Chr6:8209082-8209101 MsG0680030732.01.T01:intron 20.0%
!!! TTGACATTTTTGTTTTTGTA+TGG + Chr6:8206324-8206343 MsG0680030732.01.T01:intron 20.0%
!!! TTGTTAATCTAGAATTTGTT+AGG + Chr6:8210586-8210605 MsG0680030732.01.T01:intron 20.0%
!!! TTTTGTCTTTTTTTTCTGTA+GGG - Chr6:8208839-8208858 None:intergenic 20.0%
! AAACTCAAATCATATCAATG+TGG - Chr6:8209657-8209676 None:intergenic 25.0%
! ACTAAAATATATATCTCGTG+GGG - Chr6:8206007-8206026 None:intergenic 25.0%
! AGCTATATAGTTAGTAATGA+AGG + Chr6:8206223-8206242 MsG0680030732.01.T01:intron 25.0%
! AGCTTTCACTTAAATTATGT+TGG + Chr6:8210548-8210567 MsG0680030732.01.T01:intron 25.0%
! ATCATATAAACAGTTTAGAC+TGG - Chr6:8206818-8206837 None:intergenic 25.0%
! ATGTTGTAGTTATCATTTGT+AGG + Chr6:8210851-8210870 MsG0680030732.01.T01:intron 25.0%
! ATTAGTCATTAACAAAGTTG+TGG + Chr6:8209355-8209374 MsG0680030732.01.T01:intron 25.0%
! CATTTATATTCTAATGTTGC+AGG + Chr6:8207775-8207794 MsG0680030732.01.T01:intron 25.0%
! TCAATGATATTTCAGATTGA+AGG + Chr6:8205295-8205314 MsG0680030732.01.T01:intron 25.0%
! TGATGGCTAAAATTAAACAT+GGG - Chr6:8208989-8209008 None:intergenic 25.0%
! TGATTTACTTTGTGGTTATT+AGG + Chr6:8206183-8206202 MsG0680030732.01.T01:intron 25.0%
! TGCACTATTATTATACATGA+TGG + Chr6:8209909-8209928 MsG0680030732.01.T01:intron 25.0%
! TGTTGTAGTTATCATTTGTA+GGG + Chr6:8210852-8210871 MsG0680030732.01.T01:intron 25.0%
! TTAGAAGTCAAATGAATGAA+TGG - Chr6:8206161-8206180 None:intergenic 25.0%
! TTATTGTCTAAAGACTAAAG+AGG + Chr6:8206361-8206380 MsG0680030732.01.T01:intron 25.0%
! TTCTAATGTGATTTACTTTG+TGG + Chr6:8206175-8206194 MsG0680030732.01.T01:intron 25.0%
!! AATGCTAATTATTTTCAGCT+AGG - Chr6:8207759-8207778 None:intergenic 25.0%
!! AATGTGCAAGTATGTAATTT+TGG - Chr6:8206761-8206780 None:intergenic 25.0%
!! ATATTTGAGATGTAAGGAAT+AGG + Chr6:8209088-8209107 MsG0680030732.01.T01:intron 25.0%
!! ATCAATATTTCTATTTGTGC+CGG + Chr6:8208567-8208586 MsG0680030732.01.T01:intron 25.0%
!! ATTTTACGATCAAGATCATA+TGG + Chr6:8208372-8208391 MsG0680030732.01.T01:intron 25.0%
!! CATTTTACCATGAATACTAT+TGG + Chr6:8205783-8205802 MsG0680030732.01.T01:intron 25.0%
!! TACAAAAAAATCACTAGCTT+AGG - Chr6:8206510-8206529 None:intergenic 25.0%
!! TATTTTGTGAACTGTTTGAT+CGG - Chr6:8207042-8207061 None:intergenic 25.0%
!! TTGATGGCTAAAATTAAACA+TGG - Chr6:8208990-8209009 None:intergenic 25.0%
!! TTTTAATGTGTTGTACAGAT+GGG + Chr6:8207161-8207180 MsG0680030732.01.T01:intron 25.0%
!! TTTTTAATGTGTTGTACAGA+TGG + Chr6:8207160-8207179 MsG0680030732.01.T01:intron 25.0%
!!! AAATATTGATAGTGACATGT+GGG - Chr6:8208557-8208576 None:intergenic 25.0%
!!! AGAAAGGCATAACTATTTTA+AGG - Chr6:8208050-8208069 None:intergenic 25.0%
!!! ATAATGAGTTTTGTATTCCT+AGG - Chr6:8206416-8206435 None:intergenic 25.0%
!!! ATTTGAAGTTGAAGGAATTT+TGG - Chr6:8210498-8210517 None:intergenic 25.0%
!!! TATTTTTGTGACAACTCATA+AGG + Chr6:8205656-8205675 MsG0680030732.01.T01:intron 25.0%
!!! TTATGTTGATAATTGGCAAT+AGG + Chr6:8205244-8205263 MsG0680030732.01.T01:intron 25.0%
AAAGTTCTATGCTCTACATA+GGG - Chr6:8206256-8206275 None:intergenic 30.0%
AAATATACATTGCGTGACTT+TGG - Chr6:8208356-8208375 None:intergenic 30.0%
AAGATTTAAAAGTGGAAGGA+AGG + Chr6:8208711-8208730 MsG0680030732.01.T01:CDS 30.0%
AAGCATAGAAGAATATCCTA+TGG - Chr6:8206478-8206497 None:intergenic 30.0%
AATTCATGCAGTCAATACAA+CGG - Chr6:8206990-8207009 None:intergenic 30.0%
ACTAAGAGTCTCATTTAACT+TGG + Chr6:8209428-8209447 MsG0680030732.01.T01:intron 30.0%
AGCATAGAAGAATATCCTAT+GGG - Chr6:8206477-8206496 None:intergenic 30.0%
AGGAAAGGAATGTTTATGAA+TGG + Chr6:8208666-8208685 MsG0680030732.01.T01:CDS 30.0%
ATCCTAATATGCCATATTTC+AGG + Chr6:8206715-8206734 MsG0680030732.01.T01:intron 30.0%
ATTCATAATATCTCGACTCT+AGG + Chr6:8207007-8207026 MsG0680030732.01.T01:intron 30.0%
CAATCATGAATCTTGACAAT+TGG - Chr6:8208274-8208293 None:intergenic 30.0%
CCAACTTGAAGATTTAAAAG+TGG + Chr6:8208703-8208722 MsG0680030732.01.T01:CDS 30.0%
CGCTGCAATATTTAATGTTA+AGG + Chr6:8207652-8207671 MsG0680030732.01.T01:intron 30.0%
CTGTTAGTAATTGTTTCCTT+TGG - Chr6:8205034-8205053 None:intergenic 30.0%
CTTGAAGATTTAAAAGTGGA+AGG + Chr6:8208707-8208726 MsG0680030732.01.T01:CDS 30.0%
GCACATCAAATCATATGATT+GGG + Chr6:8207276-8207295 MsG0680030732.01.T01:intron 30.0%
TACTAAAAACTGTCATTCCA+GGG - Chr6:8207232-8207251 None:intergenic 30.0%
TATAGATTCTTGACCTTAGA+GGG + Chr6:8210046-8210065 MsG0680030732.01.T01:CDS 30.0%
TATATCTCTTGACATATCCT+CGG + Chr6:8208111-8208130 MsG0680030732.01.T01:intron 30.0%
TCAATCAAGATCAAATGACT+TGG - Chr6:8208482-8208501 None:intergenic 30.0%
TCCTAATATGCCATATTTCA+GGG + Chr6:8206716-8206735 MsG0680030732.01.T01:intron 30.0%
TGAAACACACCAATTATTAC+TGG + Chr6:8206539-8206558 MsG0680030732.01.T01:intron 30.0%
TGAAGTGTATTAGTGAAGAA+AGG - Chr6:8208066-8208085 None:intergenic 30.0%
TGCACATCAAATCATATGAT+TGG + Chr6:8207275-8207294 MsG0680030732.01.T01:intron 30.0%
TGGAATTCATTGCAACATAA+CGG + Chr6:8208304-8208323 MsG0680030732.01.T01:intron 30.0%
TGTAAGTGGTTCATGTTTAT+AGG + Chr6:8206579-8206598 MsG0680030732.01.T01:intron 30.0%
TGTGGTTATTAGGACTAATT+AGG + Chr6:8206193-8206212 MsG0680030732.01.T01:intron 30.0%
TTACTAAAAACTGTCATTCC+AGG - Chr6:8207233-8207252 None:intergenic 30.0%
TTATAGATTCTTGACCTTAG+AGG + Chr6:8210045-8210064 MsG0680030732.01.T01:CDS 30.0%
TTATGAATGGCTACAAGAAA+AGG + Chr6:8208679-8208698 MsG0680030732.01.T01:CDS 30.0%
TTATGAGTGTGAGAAATTCT+CGG + Chr6:8206780-8206799 MsG0680030732.01.T01:CDS 30.0%
TTCACCTCACATGAAAATTA+AGG - Chr6:8209940-8209959 None:intergenic 30.0%
TTCTCATGAATTTCAGTTGA+AGG + Chr6:8208626-8208645 MsG0680030732.01.T01:intron 30.0%
! AACATTTTCCAGCATATGTA+CGG - Chr6:8209995-8210014 None:intergenic 30.0%
! ACTCATTTAAGACGTGTAAT+CGG + Chr6:8209518-8209537 MsG0680030732.01.T01:intron 30.0%
! AGATTTTTGTGAATTGCCAA+AGG + Chr6:8205015-8205034 MsG0680030732.01.T01:CDS 30.0%
! ATTGTGTAGATTTGAAGCAA+TGG + Chr6:8210950-8210969 MsG0680030732.01.T01:intron 30.0%
! CAATCTTGTAGATTTTATGC+TGG + Chr6:8208872-8208891 MsG0680030732.01.T01:intron 30.0%
! GAAAATTTTACCTGGAAAGT+TGG - Chr6:8207997-8208016 None:intergenic 30.0%
! TAGTAAGCTAGTACTACTTT+TGG + Chr6:8207247-8207266 MsG0680030732.01.T01:intron 30.0%
! TTTTCTTCTCCTTTTCTTCA+TGG + Chr6:8208928-8208947 MsG0680030732.01.T01:intron 30.0%
! TTTTGTATTCCTAGGCTTAT+AGG - Chr6:8206408-8206427 None:intergenic 30.0%
!! CCACTTTTAAATCTTCAAGT+TGG - Chr6:8208706-8208725 None:intergenic 30.0%
!! GAAATATTGATAGTGACATG+TGG - Chr6:8208558-8208577 None:intergenic 30.0%
!! GTATAAAGTCGAAAAGTACT+TGG - Chr6:8208028-8208047 None:intergenic 30.0%
!! GTTGTTTGATTTGAAGTTGA+AGG - Chr6:8210506-8210525 None:intergenic 30.0%
AAAAGGTGGAAGAGAAGAAT+AGG + Chr6:8210074-8210093 MsG0680030732.01.T01:CDS 35.0%
AAATCTCGATCCGAAATCTA+AGG - Chr6:8208411-8208430 None:intergenic 35.0%
AACTCACCCAATAGTATTCA+TGG - Chr6:8205793-8205812 None:intergenic 35.0%
AAGCACACAATGAGACAAAT+CGG - Chr6:8208511-8208530 None:intergenic 35.0%
AAGGAAGTCTTTGCTAATAG+TGG + Chr6:8205121-8205140 MsG0680030732.01.T01:CDS 35.0%
AAGTACTACTCACTTTCTGA+GGG - Chr6:8207340-8207359 None:intergenic 35.0%
ACACAGACACCAGTAATAAT+TGG - Chr6:8206551-8206570 None:intergenic 35.0%
AGAACCTTAGCTGATAGAAA+AGG + Chr6:8204989-8205008 MsG0680030732.01.T01:CDS 35.0%
AGACTAAAGAGGAAGTAGTT+TGG + Chr6:8206372-8206391 MsG0680030732.01.T01:intron 35.0%
AGGAAACAATTACTAACAGC+AGG + Chr6:8205035-8205054 MsG0680030732.01.T01:CDS 35.0%
AGGAAGTCTTTGCTAATAGT+GGG + Chr6:8205122-8205141 MsG0680030732.01.T01:CDS 35.0%
AGTTCTGCTCTTTACCTAAA+CGG + Chr6:8210273-8210292 MsG0680030732.01.T01:intron 35.0%
ATAGCCAAATCAAAGAACCT+CGG - Chr6:8205947-8205966 None:intergenic 35.0%
ATATGCGTCAGTATCCTTAT+TGG + Chr6:8205600-8205619 MsG0680030732.01.T01:intron 35.0%
ATCATATCAATGTGGTCGAT+CGG - Chr6:8209649-8209668 None:intergenic 35.0%
ATCCTCAGGATAAGATAGAA+GGG - Chr6:8207856-8207875 None:intergenic 35.0%
ATTAAAGTTTATGTGGGGTC+CGG - Chr6:8208589-8208608 None:intergenic 35.0%
CAGACATTTCATCAAACACT+TGG - Chr6:8210897-8210916 None:intergenic 35.0%
CATCAAATCATATGATTGGG+TGG + Chr6:8207279-8207298 MsG0680030732.01.T01:intron 35.0%
CGAAGTAACACCTTAGATTT+CGG + Chr6:8208398-8208417 MsG0680030732.01.T01:intron 35.0%
CTAGAGTTGTATACTTTGCA+TGG - Chr6:8206649-8206668 None:intergenic 35.0%
CTATTTACAATCTAACGACG+AGG - Chr6:8209333-8209352 None:intergenic 35.0%
CTTCATGGAACAACAGAAAA+AGG + Chr6:8208943-8208962 MsG0680030732.01.T01:intron 35.0%
CTTGGTTGAATTCATTCAGT+TGG - Chr6:8211070-8211089 None:intergenic 35.0%
GAAAGTTCTATGCTCTACAT+AGG - Chr6:8206257-8206276 None:intergenic 35.0%
GAATAGGTAAGTACATGTGA+TGG + Chr6:8210090-8210109 MsG0680030732.01.T01:intron 35.0%
GCATAGAAGAATATCCTATG+GGG - Chr6:8206476-8206495 None:intergenic 35.0%
GGTAACAGTTGGATCAATAT+CGG - Chr6:8206969-8206988 None:intergenic 35.0%
GTACATATGCTGGAAAATGT+TGG + Chr6:8209994-8210013 MsG0680030732.01.T01:intron 35.0%
GTGTGTTGTGTTAGAAAATG+AGG - Chr6:8210442-8210461 None:intergenic 35.0%
TAAACATTCCTTTCCTCTTC+TGG - Chr6:8208662-8208681 None:intergenic 35.0%
TAAGTACTACTCACTTTCTG+AGG - Chr6:8207341-8207360 None:intergenic 35.0%
TATTCCGAGGTTCTTTGATT+TGG + Chr6:8205940-8205959 MsG0680030732.01.T01:intron 35.0%
TCTGTTGTTCCATGAAGAAA+AGG - Chr6:8208940-8208959 None:intergenic 35.0%
TTACCTGGAAAGTTGGAAAA+CGG - Chr6:8207990-8208009 None:intergenic 35.0%
TTAGAAAATGAGGCAGAATG+AGG - Chr6:8210432-8210451 None:intergenic 35.0%
TTGAAAATGGTAGGAGATTC+AGG - Chr6:8207316-8207335 None:intergenic 35.0%
! AAAACCAGAAGATGTTGACT+TGG + Chr6:8206692-8206711 MsG0680030732.01.T01:intron 35.0%
! ACTTTCTGAGGGTTTGAAAA+TGG - Chr6:8207329-8207348 None:intergenic 35.0%
! AGGCATTTTGGACTTTACTT+TGG - Chr6:8210311-8210330 None:intergenic 35.0%
! GACTCCTTAATTTTCATGTG+AGG + Chr6:8209933-8209952 MsG0680030732.01.T01:intron 35.0%
! GGCATTTTGGACTTTACTTT+GGG - Chr6:8210310-8210329 None:intergenic 35.0%
! TCTTCCTTTTCTATCAGCTA+AGG - Chr6:8204996-8205015 None:intergenic 35.0%
!! ATATTTTGTTTGCCACCTTC+TGG + Chr6:8207185-8207204 MsG0680030732.01.T01:CDS 35.0%
!!! AGTTGAAGGAATTTTGGAGT+TGG - Chr6:8210492-8210511 None:intergenic 35.0%
!!! GAGACTTTTTGAGACTTGTA+AGG + Chr6:8205102-8205121 MsG0680030732.01.T01:CDS 35.0%
!!! GTTGAAGGAATTTTGGAGTT+GGG - Chr6:8210491-8210510 None:intergenic 35.0%
!!! TTATTTTGGTGTCTACACGT+CGG + Chr6:8205398-8205417 MsG0680030732.01.T01:intron 35.0%
AAAATGGTAGGAGATTCAGG+AGG - Chr6:8207313-8207332 None:intergenic 40.0%
AACCCTTCTATCTTATCCTG+AGG + Chr6:8207851-8207870 MsG0680030732.01.T01:intron 40.0%
AACTTATCAATGTCCTGAGC+TGG - Chr6:8205163-8205182 None:intergenic 40.0%
AACTTGGTTGTTGAGCAAAC+TGG + Chr6:8209444-8209463 MsG0680030732.01.T01:intron 40.0%
AATGTCTATGTCAACCCCAT+AGG + Chr6:8206459-8206478 MsG0680030732.01.T01:intron 40.0%
ACAATGTGATGTCAAGTCCA+TGG + Chr6:8206029-8206048 MsG0680030732.01.T01:intron 40.0%
ACACATCACATCTCACACTA+AGG - Chr6:8205863-8205882 None:intergenic 40.0%
ACAGTTGGATCAATATCGGA+TGG - Chr6:8206965-8206984 None:intergenic 40.0%
AGATGCATTGCCCTGAAATA+TGG - Chr6:8206729-8206748 None:intergenic 40.0%
AGTCAAGTGATCTTGGTTGT+TGG + Chr6:8208168-8208187 MsG0680030732.01.T01:intron 40.0%
AGTTAACGGTTGCAATGCAA+CGG - Chr6:8207580-8207599 None:intergenic 40.0%
ATACTATTGGGTGAGTTGTG+TGG + Chr6:8205796-8205815 MsG0680030732.01.T01:intron 40.0%
ATCGTGTAGTCAAGTGATCT+TGG + Chr6:8208161-8208180 MsG0680030732.01.T01:intron 40.0%
ATGCAGCTGTAACTTAGTCA+CGG + Chr6:8207620-8207639 MsG0680030732.01.T01:intron 40.0%
ATTCCAGGGTGATTATGTAG+AGG - Chr6:8207218-8207237 None:intergenic 40.0%
ATTCCTCTACATAATCACCC+TGG + Chr6:8207212-8207231 MsG0680030732.01.T01:CDS 40.0%
ATTCCTTTCCTCTTCTGGTA+TGG - Chr6:8208657-8208676 None:intergenic 40.0%
ATTGAGGTCAGTTCTTCTTC+TGG + Chr6:8209699-8209718 MsG0680030732.01.T01:intron 40.0%
CAATTACTAACAGCAGGTCA+AGG + Chr6:8205041-8205060 MsG0680030732.01.T01:CDS 40.0%
CACATTGTATTGAAGCTAGC+TGG + Chr6:8210147-8210166 MsG0680030732.01.T01:intron 40.0%
CATCCTCAGGATAAGATAGA+AGG - Chr6:8207857-8207876 None:intergenic 40.0%
CATTCACACAGTCAATGCAT+TGG + Chr6:8206879-8206898 MsG0680030732.01.T01:intron 40.0%
CCATCAAGATCAGAATATGG+AGG - Chr6:8207939-8207958 None:intergenic 40.0%
CCTCCATATTCTGATCTTGA+TGG + Chr6:8207936-8207955 MsG0680030732.01.T01:intron 40.0%
CTAAAGAGGAAGTAGTTTGG+TGG + Chr6:8206375-8206394 MsG0680030732.01.T01:intron 40.0%
CTCAGGACATTGATAAGTTG+CGG + Chr6:8205164-8205183 MsG0680030732.01.T01:CDS 40.0%
CTGCCATCAAGATCAGAATA+TGG - Chr6:8207942-8207961 None:intergenic 40.0%
CTTCTATCTTATCCTGAGGA+TGG + Chr6:8207855-8207874 MsG0680030732.01.T01:intron 40.0%
GAAGAGATATCCGAAGTGAA+GGG - Chr6:8206860-8206879 None:intergenic 40.0%
GACCTCTTAACGTTACATGA+AGG - Chr6:8211040-8211059 None:intergenic 40.0%
GACGTTCATGCAGAATTCAA+CGG + Chr6:8210984-8211003 MsG0680030732.01.T01:CDS 40.0%
GAGTTGAGGTTAGCAAAAGA+AGG + Chr6:8207802-8207821 MsG0680030732.01.T01:intron 40.0%
GATAAGATAGAAGGGTTGCA+AGG - Chr6:8207848-8207867 None:intergenic 40.0%
GCAACAACAATGACTCAATG+AGG + Chr6:8210204-8210223 MsG0680030732.01.T01:intron 40.0%
GCACTTTCACCTGAAGTTAA+CGG - Chr6:8207594-8207613 None:intergenic 40.0%
GCCCTGAAATATGGCATATT+AGG - Chr6:8206720-8206739 None:intergenic 40.0%
GTCAATACAACGGTAACAGT+TGG - Chr6:8206980-8206999 None:intergenic 40.0%
GTCTCAAAAAGTCTCTGAAC+CGG - Chr6:8205097-8205116 None:intergenic 40.0%
GTCTCATTCACATTAGACCA+TGG - Chr6:8206049-8206068 None:intergenic 40.0%
TACTATTGGGTGAGTTGTGT+GGG + Chr6:8205797-8205816 MsG0680030732.01.T01:intron 40.0%
TATCCATACCAGAAGAGGAA+AGG + Chr6:8208651-8208670 MsG0680030732.01.T01:CDS 40.0%
TCTGAGGGTTTGAAAATGGT+AGG - Chr6:8207325-8207344 None:intergenic 40.0%
TGAAGAGATATCCGAAGTGA+AGG - Chr6:8206861-8206880 None:intergenic 40.0%
TGCCTTCATGTAACGTTAAG+AGG + Chr6:8211035-8211054 MsG0680030732.01.T01:CDS 40.0%
TGCTAACTCTCCACAATAGT+TGG - Chr6:8208749-8208768 None:intergenic 40.0%
TGGCTATTGCAATATCTGTG+TGG - Chr6:8209971-8209990 None:intergenic 40.0%
TGTAACGTTAAGAGGTCTCA+AGG + Chr6:8211043-8211062 MsG0680030732.01.T01:CDS 40.0%
TGTAGAGGAATAACACCAGA+AGG - Chr6:8207203-8207222 None:intergenic 40.0%
TGTCAAAGTACGACATGACT+GGG + Chr6:8205525-8205544 MsG0680030732.01.T01:intron 40.0%
TGTGCAGTTCTTGATGTTCT+TGG + Chr6:8207912-8207931 MsG0680030732.01.T01:intron 40.0%
TTGGATCAATATCGGATGGT+TGG - Chr6:8206961-8206980 None:intergenic 40.0%
! AAAACGTGACGAGCATGTTT+TGG + Chr6:8211195-8211214 MsG0680030732.01.T01:CDS 40.0%
! AAACGTGACGAGCATGTTTT+GGG + Chr6:8211196-8211215 MsG0680030732.01.T01:CDS 40.0%
! AAGGAAAGTACGGACAAATG+TGG + Chr6:8207671-8207690 MsG0680030732.01.T01:intron 40.0%
! ACATGTGATAGAGACTAGCT+TGG + Chr6:8210115-8210134 MsG0680030732.01.T01:intron 40.0%
! ATGACTCAATGAGGTTGATC+TGG + Chr6:8210213-8210232 MsG0680030732.01.T01:intron 40.0%
! GAAATGGATTCCCTTCACTT+CGG + Chr6:8206847-8206866 MsG0680030732.01.T01:intron 40.0%
! GATAAGTTGCGGTCTGTTTT+AGG + Chr6:8205175-8205194 MsG0680030732.01.T01:CDS 40.0%
! TAGCTTCTCTTTTGTGCAGA+TGG + Chr6:8206666-8206685 MsG0680030732.01.T01:intron 40.0%
! TATCCGTTTTCCAACTTTCC+AGG + Chr6:8207984-8208003 MsG0680030732.01.T01:intron 40.0%
! TCTTTTGCTAACCTCAACTC+AGG - Chr6:8207802-8207821 None:intergenic 40.0%
! TGTAGATTTGAAGCAATGGC+CGG + Chr6:8210954-8210973 MsG0680030732.01.T01:intron 40.0%
! TTTTCCAGCATATGTACGGT+TGG - Chr6:8209991-8210010 None:intergenic 40.0%
!! TCGGTGTCGAGTTAATTTCA+TGG + Chr6:8205417-8205436 MsG0680030732.01.T01:intron 40.0%
!! TTGCGTGACTTTGGAATTCA+CGG - Chr6:8208347-8208366 None:intergenic 40.0%
!!! TAAGTTGCGTAGAGGCATTT+TGG - Chr6:8210323-8210342 None:intergenic 40.0%
AAACATCCAAAGCTCGACGA+GGG + Chr6:8211134-8211153 MsG0680030732.01.T01:CDS 45.0%
AACCTCAGAGGTTGAAGGTT+CGG + Chr6:8211012-8211031 MsG0680030732.01.T01:CDS 45.0%
AATGTGTCACAGTGTCGTGT+CGG - Chr6:8205348-8205367 None:intergenic 45.0%
ACAAGAAACGGACACCAAAC+AGG - Chr6:8205630-8205649 None:intergenic 45.0%
ACCAAACAGGGACACCAATA+AGG - Chr6:8205617-8205636 None:intergenic 45.0%
ACTATTGGGTGAGTTGTGTG+GGG + Chr6:8205798-8205817 MsG0680030732.01.T01:intron 45.0%
ACTTTACCATCTAGCCCCAT+CGG + Chr6:8209475-8209494 MsG0680030732.01.T01:intron 45.0%
AGAGAAGAGAGACATGAGAG+AGG - Chr6:8206116-8206135 None:intergenic 45.0%
AGAGGAATAACACCAGAAGG+TGG - Chr6:8207200-8207219 None:intergenic 45.0%
AGGACTATCCATACCAGAAG+AGG + Chr6:8208646-8208665 MsG0680030732.01.T01:CDS 45.0%
ATAGCCAACCGTACATATGC+TGG + Chr6:8209984-8210003 MsG0680030732.01.T01:intron 45.0%
CAAGAAACGGACACCAAACA+GGG - Chr6:8205629-8205648 None:intergenic 45.0%
CATATCGATCCACTGGAACT+TGG - Chr6:8211228-8211247 None:intergenic 45.0%
CCTCTACGCAACTTAACATG+CGG + Chr6:8210328-8210347 MsG0680030732.01.T01:intron 45.0%
CTATCTTATCCTGAGGATGG+TGG + Chr6:8207858-8207877 MsG0680030732.01.T01:intron 45.0%
CTTAGAGGGACATGAAAAGG+TGG + Chr6:8210060-8210079 MsG0680030732.01.T01:CDS 45.0%
GACCTTAGAGGGACATGAAA+AGG + Chr6:8210057-8210076 MsG0680030732.01.T01:CDS 45.0%
GCATTGCAACCGTTAACTTC+AGG + Chr6:8207582-8207601 MsG0680030732.01.T01:intron 45.0%
GGATCCAAGTCAACATCTTC+TGG - Chr6:8206699-8206718 None:intergenic 45.0%
GGCTTAAAGCCTATAAGCCT+AGG + Chr6:8206396-8206415 MsG0680030732.01.T01:intron 45.0%
GTACAGTGGTCCAACTATTG+TGG + Chr6:8208736-8208755 MsG0680030732.01.T01:CDS 45.0%
GTGTCAAAGTACGACATGAC+TGG + Chr6:8205524-8205543 MsG0680030732.01.T01:intron 45.0%
GTTCATGCAGAATTCAACGG+CGG + Chr6:8210987-8211006 MsG0680030732.01.T01:CDS 45.0%
GTTCTGTCTGGGCTAATAAC+AGG - Chr6:8210410-8210429 None:intergenic 45.0%
TAAACATCCAAAGCTCGACG+AGG + Chr6:8211133-8211152 MsG0680030732.01.T01:CDS 45.0%
TATCAATGTCCTGAGCTGGT+GGG - Chr6:8205159-8205178 None:intergenic 45.0%
TCAAAAAGTCTCTGAACCGG+CGG - Chr6:8205094-8205113 None:intergenic 45.0%
TTACTAACAGCAGGTCAAGG+AGG + Chr6:8205044-8205063 MsG0680030732.01.T01:CDS 45.0%
TTATCAATGTCCTGAGCTGG+TGG - Chr6:8205160-8205179 None:intergenic 45.0%
TTCATGATTGCGTGACGAGA+TGG + Chr6:8208284-8208303 MsG0680030732.01.T01:intron 45.0%
TTTGTGCCTGTACGCAATCT+AGG + Chr6:8208530-8208549 MsG0680030732.01.T01:intron 45.0%
! ACTGTTCGATCTGAAACCAG+CGG - Chr6:8206908-8206927 None:intergenic 45.0%
! CAAGGAGGGTGCAAAATGTT+CGG + Chr6:8211108-8211127 MsG0680030732.01.T01:CDS 45.0%
! CACCTTTTCATGTCCCTCTA+AGG - Chr6:8210062-8210081 None:intergenic 45.0%
! CTTTTACTGCAGAGAATCCG+AGG - Chr6:8208131-8208150 None:intergenic 45.0%
! GTAGATTTGAAGCAATGGCC+GGG + Chr6:8210955-8210974 MsG0680030732.01.T01:intron 45.0%
! GTCTTTGCTAATAGTGGGAC+AGG + Chr6:8205127-8205146 MsG0680030732.01.T01:CDS 45.0%
! TCCTTATTGGTGTCCCTGTT+TGG + Chr6:8205613-8205632 MsG0680030732.01.T01:intron 45.0%
!! AGGGGAGAGTATCATTCACT+TGG + Chr6:8211153-8211172 MsG0680030732.01.T01:CDS 45.0%
!! GAGAGTATCATTCACTTGGG+TGG + Chr6:8211157-8211176 MsG0680030732.01.T01:CDS 45.0%
!! GGGGAGAGTATCATTCACTT+GGG + Chr6:8211154-8211173 MsG0680030732.01.T01:CDS 45.0%
AACATCCAAAGCTCGACGAG+GGG + Chr6:8211135-8211154 MsG0680030732.01.T01:CDS 50.0%
AACCACCGCAGTTGTAGTTG+CGG + Chr6:8207551-8207570 MsG0680030732.01.T01:intron 50.0%
AGGCAGAATGAGGTTCTGTC+TGG - Chr6:8210422-8210441 None:intergenic 50.0%
AGGGCAATGCATCTCACAGA+AGG + Chr6:8206735-8206754 MsG0680030732.01.T01:intron 50.0%
ATGTTGCAGGTCCTGAGTTG+AGG + Chr6:8207788-8207807 MsG0680030732.01.T01:intron 50.0%
CAACTACAACTGCGGTGGTT+TGG - Chr6:8207551-8207570 None:intergenic 50.0%
CTATTGGGTGAGTTGTGTGG+GGG + Chr6:8205799-8205818 MsG0680030732.01.T01:intron 50.0%
CTTTACCATCTAGCCCCATC+GGG + Chr6:8209476-8209495 MsG0680030732.01.T01:intron 50.0%
GGCAGAATGAGGTTCTGTCT+GGG - Chr6:8210421-8210440 None:intergenic 50.0%
GGGAATGAGCAGAACCGTTT+AGG - Chr6:8210290-8210309 None:intergenic 50.0%
GGTAACCGCAACTACAACTG+CGG - Chr6:8207559-8207578 None:intergenic 50.0%
GTGGAAGGAAGGATGTACAG+TGG + Chr6:8208722-8208741 MsG0680030732.01.T01:CDS 50.0%
TATTGGGTGAGTTGTGTGGG+GGG + Chr6:8205800-8205819 MsG0680030732.01.T01:intron 50.0%
TCACTCGCATATCGATCCAC+TGG - Chr6:8211235-8211254 None:intergenic 50.0%
! CAACTGCGGTGGTTTGGATA+TGG - Chr6:8207545-8207564 None:intergenic 50.0%
! CCGCATGTTAAGTTGCGTAG+AGG - Chr6:8210331-8210350 None:intergenic 50.0%
!! TGCGGTCTGTTTTAGGTACG+AGG + Chr6:8205182-8205201 MsG0680030732.01.T01:intron 50.0%
AACCGCAACTACAACTGCGG+TGG - Chr6:8207556-8207575 None:intergenic 55.0%
ACAGCAGGTCAAGGAGGAAC+CGG + Chr6:8205050-8205069 MsG0680030732.01.T01:CDS 55.0%
AGGAATTGTCCCACCAGCTC+AGG + Chr6:8205147-8205166 MsG0680030732.01.T01:CDS 55.0%
CAACCCCAGAGACACAAGGA+GGG + Chr6:8211094-8211113 MsG0680030732.01.T01:CDS 55.0%
CACCGAACCTTCAACCTCTG+AGG - Chr6:8211017-8211036 None:intergenic 55.0%
CACTCAACCCCAGAGACACA+AGG + Chr6:8211090-8211109 MsG0680030732.01.T01:CDS 55.0%
CCATCGGGTTCGATCTTTGG+GGG + Chr6:8209491-8209510 MsG0680030732.01.T01:intron 55.0%
CCCAAAGATCGAACCCGATG+GGG - Chr6:8209492-8209511 None:intergenic 55.0%
CCCATCGGGTTCGATCTTTG+GGG + Chr6:8209490-8209509 MsG0680030732.01.T01:intron 55.0%
CCCCAAAGATCGAACCCGAT+GGG - Chr6:8209493-8209512 None:intergenic 55.0%
CCCCATCGGGTTCGATCTTT+GGG + Chr6:8209489-8209508 MsG0680030732.01.T01:intron 55.0%
CGGAGAACCTCAGAGGTTGA+AGG + Chr6:8211007-8211026 MsG0680030732.01.T01:CDS 55.0%
CTGTGTCGCGTCTGTGTAAG+TGG + Chr6:8206565-8206584 MsG0680030732.01.T01:intron 55.0%
GTGGGACCTAGATTGCGTAC+AGG - Chr6:8208539-8208558 None:intergenic 55.0%
TCAACCCCAGAGACACAAGG+AGG + Chr6:8211093-8211112 MsG0680030732.01.T01:CDS 55.0%
TGCAAGTTGCCACCATCCTC+AGG - Chr6:8207870-8207889 None:intergenic 55.0%
TGCACCCTCCTTGTGTCTCT+GGG - Chr6:8211101-8211120 None:intergenic 55.0%
TGCATGAACGTCGATCCACC+CGG - Chr6:8210976-8210995 None:intergenic 55.0%
TTGCACCCTCCTTGTGTCTC+TGG - Chr6:8211102-8211121 None:intergenic 55.0%
! GATTTGAAGCAATGGCCGGG+TGG + Chr6:8210958-8210977 MsG0680030732.01.T01:intron 55.0%
!! TGTCTCTGGGGTTGAGTGCT+TGG - Chr6:8211088-8211107 None:intergenic 55.0%
ACTCTCCCCTCGTCGAGCTT+TGG - Chr6:8211143-8211162 None:intergenic 60.0%
CCCCCAAAGATCGAACCCGA+TGG - Chr6:8209494-8209513 None:intergenic 60.0%
GCACCCTCCTTGTGTCTCTG+GGG - Chr6:8211100-8211119 None:intergenic 60.0%
GCATCTTCTTCTGACGCCGC+CGG - Chr6:8205072-8205091 None:intergenic 60.0%
GCCCCATCGGGTTCGATCTT+TGG + Chr6:8209488-8209507 MsG0680030732.01.T01:intron 60.0%
GCGTCAGAAGAAGATGCCGC+CGG + Chr6:8205075-8205094 MsG0680030732.01.T01:CDS 60.0%
TCAACGGCGGAGAACCTCAG+AGG + Chr6:8211000-8211019 MsG0680030732.01.T01:CDS 60.0%
TCGAACCCGATGGGGCTAGA+TGG - Chr6:8209484-8209503 None:intergenic 60.0%
! GGGAGCACACCAAGTTCCAG+TGG + Chr6:8211216-8211235 MsG0680030732.01.T01:CDS 60.0%
! GTCAATGCATTGGCGACCGC+TGG + Chr6:8206889-8206908 MsG0680030732.01.T01:intron 60.0%
GCAGGTCAAGGAGGAACCGG+CGG + Chr6:8205053-8205072 MsG0680030732.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 8204977 8211316 8204977 ID=MsG0680030732.01;Name=MsG0680030732.01
Chr6 mRNA 8204977 8211316 8204977 ID=MsG0680030732.01.T01;Parent=MsG0680030732.01;Name=MsG0680030732.01.T01;_AED=0.71;_eAED=0.72;_QI=0|0|0|0.66|1|1|6|0|294
Chr6 exon 8204977 8205196 8204977 ID=MsG0680030732.01.T01:exon:7006;Parent=MsG0680030732.01.T01
Chr6 exon 8206737 8206801 8206737 ID=MsG0680030732.01.T01:exon:7007;Parent=MsG0680030732.01.T01
Chr6 exon 8207179 8207248 8207179 ID=MsG0680030732.01.T01:exon:7008;Parent=MsG0680030732.01.T01
Chr6 exon 8208642 8208761 8208642 ID=MsG0680030732.01.T01:exon:7009;Parent=MsG0680030732.01.T01
Chr6 exon 8210044 8210095 8210044 ID=MsG0680030732.01.T01:exon:7010;Parent=MsG0680030732.01.T01
Chr6 exon 8210959 8211316 8210959 ID=MsG0680030732.01.T01:exon:7011;Parent=MsG0680030732.01.T01
Chr6 CDS 8204977 8205196 8204977 ID=MsG0680030732.01.T01:cds;Parent=MsG0680030732.01.T01
Chr6 CDS 8206737 8206801 8206737 ID=MsG0680030732.01.T01:cds;Parent=MsG0680030732.01.T01
Chr6 CDS 8207179 8207248 8207179 ID=MsG0680030732.01.T01:cds;Parent=MsG0680030732.01.T01
Chr6 CDS 8208642 8208761 8208642 ID=MsG0680030732.01.T01:cds;Parent=MsG0680030732.01.T01
Chr6 CDS 8210044 8210095 8210044 ID=MsG0680030732.01.T01:cds;Parent=MsG0680030732.01.T01
Chr6 CDS 8210959 8211316 8210959 ID=MsG0680030732.01.T01:cds;Parent=MsG0680030732.01.T01
Gene Sequence

>MsG0680030732.01.T01

ATGGGGATAGAGAGAACCTTAGCTGATAGAAAAGGAAGAGATTTTTGTGAATTGCCAAAGGAAACAATTACTAACAGCAGGTCAAGGAGGAACCGGCGGCGTCAGAAGAAGATGCCGCCGGTTCAGAGACTTTTTGAGACTTGTAAGGAAGTCTTTGCTAATAGTGGGACAGGAATTGTCCCACCAGCTCAGGACATTGATAAGTTGCGGTCTGTTTTAGGGCAATGCATCTCACAGAAGGCCAAAATTACATACTTGCACATTTATGAGTGTGAGAAATTCTCGATGGGAATATTTTGTTTGCCACCTTCTGGTGTTATTCCTCTACATAATCACCCTGGAATGACAGTTTTTATTGAAGGACTATCCATACCAGAAGAGGAAAGGAATGTTTATGAATGGCTACAAGAAAAGGACCAACTTGAAGATTTAAAAGTGGAAGGAAGGATGTACAGTGGTCCAACTATTGTGGAGATTTATAGATTCTTGACCTTAGAGGGACATGAAAAGGTGGAAGAGAAGAATAGATTTGAAGCAATGGCCGGGTGGATCGACGTTCATGCAGAATTCAACGGCGGAGAACCTCAGAGGTTGAAGGTTCGGTGCCTTCATGTAACGTTAAGAGGTCTCAAGGACCAACTGAATGAATTCAACCAAGCACTCAACCCCAGAGACACAAGGAGGGTGCAAAATGTTCGGTATAAACATCCAAAGCTCGACGAGGGGAGAGTATCATTCACTTGGGTGGAGTTAAAGAACGACGAAAACGTGACGAGCATGTTTTGGGAGCACACCAAGTTCCAGTGGATCGATATGCGAGTGACGTTGCTGAGATCAACTGAAGATATCATCAACAACTTGATTCCGCCAGAAGATCGTCATTAG

Protein sequence

>MsG0680030732.01.T01

MGIERTLADRKGRDFCELPKETITNSRSRRNRRRQKKMPPVQRLFETCKEVFANSGTGIVPPAQDIDKLRSVLGQCISQKAKITYLHIYECEKFSMGIFCLPPSGVIPLHNHPGMTVFIEGLSIPEEERNVYEWLQEKDQLEDLKVEGRMYSGPTIVEIYRFLTLEGHEKVEEKNRFEAMAGWIDVHAEFNGGEPQRLKVRCLHVTLRGLKDQLNEFNQALNPRDTRRVQNVRYKHPKLDEGRVSFTWVELKNDENVTSMFWEHTKFQWIDMRVTLLRSTEDIINNLIPPEDRH*