AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035347.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035347.01.T01 MTR_6g082590 86.792 106 13 1 3 107 74 179 7.37e-47 148
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 47 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAATCACTTGATGATT+TGG 0.279310 6:+102872266 MsG0680035347.01.T01:five_prime_UTR
CTAGAACCCTCTCATGTAAT+TGG 0.307512 6:-102877727 None:intergenic
TTGTAGAGAGAGAGAATTGA+AGG 0.399375 6:-102872165 None:intergenic
AATTGAAGGTGAAGATTTGA+AGG 0.403519 6:-102872151 None:intergenic
AAATCCTGATCAGCATCTAT+TGG 0.420664 6:-102877480 None:intergenic
TTAATGAAGTGATTAACTAA+TGG 0.426114 6:+102877693 MsG0680035347.01.T01:exon
GATTTGATGAGGGATATTCT+AGG 0.428796 6:+102877498 MsG0680035347.01.T01:CDS
AGACGAGTTTGATTCTGATT+CGG 0.441246 6:+102877596 MsG0680035347.01.T01:CDS
ACTAGAAGAGAAGAACGAAA+TGG 0.444395 6:-102872190 None:intergenic
GGAGCCAATAGATGCTGATC+AGG 0.455527 6:+102877476 MsG0680035347.01.T01:CDS
TTAGCATGTGGAATAGTAGA+AGG 0.471064 6:-102872225 None:intergenic
TGCAATTCCAGAAGTCTTTG+AGG 0.475249 6:+102877428 MsG0680035347.01.T01:CDS
AATACTGCCTCAAAGACTTC+TGG 0.481399 6:-102877435 None:intergenic
CTAGAAGAGAAGAACGAAAT+GGG 0.486989 6:-102872189 None:intergenic
GGTAGGGAAGGGAACAGATT+CGG 0.493759 6:+102877551 MsG0680035347.01.T01:CDS
AGTATTGCAGAGGTATTTGA+AGG 0.515107 6:+102877452 MsG0680035347.01.T01:CDS
CGAGTTTGATTCTGATTCGG+AGG 0.520197 6:+102877599 MsG0680035347.01.T01:CDS
TTGGAAGACATAAGCAATGA+AGG 0.522089 6:+102872285 MsG0680035347.01.T01:exon
GCATGTGGAATAGTAGAAGG+TGG 0.523396 6:-102872222 None:intergenic
ATTTGATGAGGGATATTCTA+GGG 0.530573 6:+102877499 MsG0680035347.01.T01:CDS
GATGAGGGATATTCTAGGGA+AGG 0.531728 6:+102877503 MsG0680035347.01.T01:CDS
TGACGATGATGAGGTAGGGA+AGG 0.546633 6:+102877539 MsG0680035347.01.T01:CDS
ATGAGGGATATTCTAGGGAA+GGG 0.555830 6:+102877504 MsG0680035347.01.T01:CDS
TCGAATGACGATGATGAGGT+AGG 0.558012 6:+102877534 MsG0680035347.01.T01:CDS
TTCATGTTAAAGAGTTGAAG+AGG 0.560555 6:+102877373 MsG0680035347.01.T01:intron
AGTTGAAGAGGCGCGTTGCA+AGG 0.563749 6:+102877385 MsG0680035347.01.T01:intron
CGAATGACGATGATGAGGTA+GGG 0.565259 6:+102877535 MsG0680035347.01.T01:CDS
CAATTACCAATTACATGAGA+GGG 0.579050 6:+102877721 MsG0680035347.01.T01:three_prime_UTR
TGCTGATCAGGATTTGATGA+GGG 0.581135 6:+102877488 MsG0680035347.01.T01:CDS
ATTGAAGGTGAAGATTTGAA+GGG 0.587096 6:-102872150 None:intergenic
ATGCTGATCAGGATTTGATG+AGG 0.589069 6:+102877487 MsG0680035347.01.T01:CDS
CGCGTTGCAAGGCTTCGAGA+AGG 0.589292 6:+102877396 MsG0680035347.01.T01:CDS
GCAATTACCAATTACATGAG+AGG 0.591428 6:+102877720 MsG0680035347.01.T01:three_prime_UTR
GACGATGATGAGGTAGGGAA+GGG 0.607551 6:+102877540 MsG0680035347.01.T01:CDS
TTGAAGGTGAAGATTTGAAG+GGG 0.608860 6:-102872149 None:intergenic
TGTGGAATAGTAGAAGGTGG+AGG 0.609126 6:-102872219 None:intergenic
TGATTCTTCACATTAGCATG+TGG 0.609229 6:-102872237 None:intergenic
GAGTTTGATTCTGATTCGGA+GGG 0.613449 6:+102877600 MsG0680035347.01.T01:CDS
TATTGCAGAGGTATTTGAAG+GGG 0.617797 6:+102877454 MsG0680035347.01.T01:CDS
AGATTCGGAAGACGATGATG+AGG 0.621691 6:+102877566 MsG0680035347.01.T01:CDS
AGAGACGAATACGACGTGCG+TGG 0.623500 6:-102872122 None:intergenic
GTATTGCAGAGGTATTTGAA+GGG 0.624345 6:+102877453 MsG0680035347.01.T01:CDS
TGAGGGATATTCTAGGGAAG+GGG 0.640498 6:+102877505 MsG0680035347.01.T01:CDS
GTGGAATAGTAGAAGGTGGA+GGG 0.645167 6:-102872218 None:intergenic
TCTTTGAGGCAGTATTGCAG+AGG 0.647544 6:+102877442 MsG0680035347.01.T01:CDS
ATTGCAGAGGTATTTGAAGG+GGG 0.655228 6:+102877455 MsG0680035347.01.T01:CDS
AGAGTCGAATGACGATGATG+AGG 0.661123 6:+102877530 MsG0680035347.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATATTGTAATTATGTT+AGG - Chr6:102872813-102872832 None:intergenic 10.0%
!! ATTATTATATATCTTAACAT+TGG + Chr6:102872847-102872866 MsG0680035347.01.T01:intron 10.0%
!! TACACAAAAAAAAAAAAAAA+AGG - Chr6:102876490-102876509 None:intergenic 10.0%
!! TTATTATATATCTTAACATT+GGG + Chr6:102876800-102876819 MsG0680035347.01.T01:intron 10.0%
!!! ATCTTTTTAAATTTGTTTTT+CGG - Chr6:102876316-102876335 None:intergenic 10.0%
!! AATTGTCCTATTTATATTAT+AGG + Chr6:102872737-102872756 MsG0680035347.01.T01:intron 15.0%
!! ATATATTTGAATACTTGAAA+TGG - Chr6:102877296-102877315 None:intergenic 15.0%
!! TATATTTGAATACTTGAAAT+GGG - Chr6:102877295-102877314 None:intergenic 15.0%
!!! ATTAATGTCATTTTTTGATA+GGG + Chr6:102875855-102875874 MsG0680035347.01.T01:intron 15.0%
!!! TATATCGAATTAGTATTTTT+TGG + Chr6:102877311-102877330 MsG0680035347.01.T01:intron 15.0%
!! ACAATCAATTTCAATATGTT+TGG + Chr6:102873035-102873054 MsG0680035347.01.T01:intron 20.0%
!! AGAAAATAATTTCATAACCA+AGG + Chr6:102875692-102875711 MsG0680035347.01.T01:intron 20.0%
!! ATAAGGTTAAAATTGAGTTT+AGG + Chr6:102875736-102875755 MsG0680035347.01.T01:intron 20.0%
!! ATATTTGAATACTTGAAATG+GGG - Chr6:102877294-102877313 None:intergenic 20.0%
!! GGATATATATGATGAAAAAT+AGG - Chr6:102875255-102875274 None:intergenic 20.0%
!! TAAGGTTAAAATTGAGTTTA+GGG + Chr6:102875737-102875756 MsG0680035347.01.T01:intron 20.0%
!! TAAGTAGTGAAAATTCAAAA+TGG - Chr6:102872440-102872459 None:intergenic 20.0%
!! TCCATTCCTATAATATAAAT+AGG - Chr6:102872746-102872765 None:intergenic 20.0%
!! TCCTATTTATATTATAGGAA+TGG + Chr6:102872742-102872761 MsG0680035347.01.T01:intron 20.0%
!! TGAATATTATTGTACGATAA+TGG - Chr6:102876235-102876254 None:intergenic 20.0%
!! TTAATGAAGTGATTAACTAA+TGG + Chr6:102877693-102877712 MsG0680035347.01.T01:exon 20.0%
!!! AACATTGGGTTTTATAAAAT+TGG + Chr6:102876814-102876833 MsG0680035347.01.T01:intron 20.0%
!!! AATCTAACAATTGTTTTAGT+TGG + Chr6:102876422-102876441 MsG0680035347.01.T01:intron 20.0%
!!! AGTACTTTTATTGAAAGATA+AGG + Chr6:102875396-102875415 MsG0680035347.01.T01:intron 20.0%
!!! ATATATTGAATTAGCCTTTT+TGG + Chr6:102872475-102872494 MsG0680035347.01.T01:intron 20.0%
!!! ATGATTATTCTCATTTTACA+TGG - Chr6:102875276-102875295 None:intergenic 20.0%
!!! GATTAATGTCATTTTTTGAT+AGG + Chr6:102875854-102875873 MsG0680035347.01.T01:intron 20.0%
!!! GTGTATTTTACAATATAACT+TGG + Chr6:102872586-102872605 MsG0680035347.01.T01:intron 20.0%
!!! TATATTGAATTAGCCTTTTT+GGG + Chr6:102872476-102872495 MsG0680035347.01.T01:intron 20.0%
! AAAAAATAACTTAAAACCCC+AGG + Chr6:102876565-102876584 MsG0680035347.01.T01:intron 25.0%
! AAAATAAAGACTCTTTCTGA+TGG - Chr6:102874242-102874261 None:intergenic 25.0%
! AAGAAAAATACAAAAACCAG+TGG + Chr6:102873278-102873297 MsG0680035347.01.T01:intron 25.0%
! ACCAGATTATAAATCACTTA+AGG - Chr6:102874873-102874892 None:intergenic 25.0%
! ACCTTAAGTGATTTATAATC+TGG + Chr6:102874869-102874888 MsG0680035347.01.T01:intron 25.0%
! AGAATTGAAAAGGACTAATT+TGG + Chr6:102872551-102872570 MsG0680035347.01.T01:intron 25.0%
! ATCATACCAAATACCAAATT+AGG - Chr6:102877218-102877237 None:intergenic 25.0%
! CAATTTCAAAAAACCCAAAA+AGG - Chr6:102872492-102872511 None:intergenic 25.0%
! CCAAATTATTCTTAGTGTTT+CGG + Chr6:102872315-102872334 MsG0680035347.01.T01:intron 25.0%
! GCAAAATTAATGTAAGTTTG+AGG + Chr6:102875220-102875239 MsG0680035347.01.T01:intron 25.0%
! TAAGCATTATATCAAACACA+TGG - Chr6:102872369-102872388 None:intergenic 25.0%
! TTAAGTAAATTACCATCTTG+AGG + Chr6:102873561-102873580 MsG0680035347.01.T01:intron 25.0%
! TTAATGATGCTACTCTTTAT+CGG - Chr6:102873545-102873564 None:intergenic 25.0%
! TTTACTCGAAAAACTGAAAA+TGG - Chr6:102873855-102873874 None:intergenic 25.0%
!! AAATTGTGTTCGAATCATTT+TGG + Chr6:102875198-102875217 MsG0680035347.01.T01:intron 25.0%
!! TATAAATCACTTAAGGTGTT+TGG - Chr6:102874866-102874885 None:intergenic 25.0%
!!! AATTTTAACCTTATCTCTGT+TGG - Chr6:102875730-102875749 None:intergenic 25.0%
!!! ACTGGTTTTTGTATTTTTCT+TGG - Chr6:102873279-102873298 None:intergenic 25.0%
!!! ATCAAGGGTACTTTATTTTA+TGG - Chr6:102873390-102873409 None:intergenic 25.0%
!!! CAATTTTGAAAAACTCAGAA+AGG - Chr6:102877155-102877174 None:intergenic 25.0%
!!! CTTTCTGAGTTTTTCAAAAT+TGG + Chr6:102877153-102877172 MsG0680035347.01.T01:intron 25.0%
!!! CTTTTTGGGTTTTTTGAAAT+TGG + Chr6:102872490-102872509 MsG0680035347.01.T01:intron 25.0%
!!! GTGTTTGTTTTTTTGCTTAT+AGG + Chr6:102877772-102877791 MsG0680035347.01.T01:three_prime_UTR 25.0%
!!! TGAAAACACTTTTGTCATTT+TGG + Chr6:102877813-102877832 MsG0680035347.01.T01:three_prime_UTR 25.0%
AAAAATACAAAAACCAGTGG+TGG + Chr6:102873281-102873300 MsG0680035347.01.T01:intron 30.0%
AAGGAAGACGATTGATTATA+TGG + Chr6:102874942-102874961 MsG0680035347.01.T01:intron 30.0%
AAGTATGTGGAATGATTCAA+CGG + Chr6:102876516-102876535 MsG0680035347.01.T01:intron 30.0%
AAGTTGAATGGAAGAATTTG+TGG + Chr6:102875543-102875562 MsG0680035347.01.T01:intron 30.0%
AATTGAAGGTGAAGATTTGA+AGG - Chr6:102872154-102872173 None:intergenic 30.0%
AGAGATTTAACAATGCTACA+TGG - Chr6:102876875-102876894 None:intergenic 30.0%
ATATACATGTCAGGAAAACA+AGG - Chr6:102873997-102874016 None:intergenic 30.0%
ATCTAGTGCATTCTGATATT+TGG - Chr6:102875354-102875373 None:intergenic 30.0%
ATGTTACAACTGCATGAAAA+AGG - Chr6:102876151-102876170 None:intergenic 30.0%
ATGTTGTGTTGTGAAATTCA+CGG - Chr6:102877072-102877091 None:intergenic 30.0%
ATTGAAGGTGAAGATTTGAA+GGG - Chr6:102872153-102872172 None:intergenic 30.0%
ATTTGATGAGGGATATTCTA+GGG + Chr6:102877499-102877518 MsG0680035347.01.T01:CDS 30.0%
CAAATTCTTCCATTCAACTT+TGG - Chr6:102875543-102875562 None:intergenic 30.0%
CAATTACCAATTACATGAGA+GGG + Chr6:102877721-102877740 MsG0680035347.01.T01:three_prime_UTR 30.0%
CCGAAACACTAAGAATAATT+TGG - Chr6:102872318-102872337 None:intergenic 30.0%
CGGAAACATTATAACAAATC+AGG - Chr6:102877052-102877071 None:intergenic 30.0%
CGGATTATTCGATATATCAA+GGG - Chr6:102873405-102873424 None:intergenic 30.0%
CTCATGTTGAAGAATTGAAA+AGG + Chr6:102872541-102872560 MsG0680035347.01.T01:intron 30.0%
GACATAAAGAAGTAAGACAA+CGG + Chr6:102873827-102873846 MsG0680035347.01.T01:intron 30.0%
GAGATTTAACAATGCTACAT+GGG - Chr6:102876874-102876893 None:intergenic 30.0%
GATCACAATAATACTCAAGA+AGG + Chr6:102876257-102876276 MsG0680035347.01.T01:intron 30.0%
GGGTTTACATCAAAAGAAAT+TGG + Chr6:102876978-102876997 MsG0680035347.01.T01:intron 30.0%
GTAGCATTGTTAAATCTCTT+AGG + Chr6:102876876-102876895 MsG0680035347.01.T01:intron 30.0%
GTGAACTTTCAATCATAACT+TGG + Chr6:102872390-102872409 MsG0680035347.01.T01:intron 30.0%
GTTAAAAATGCCTTTCTCAA+TGG - Chr6:102874059-102874078 None:intergenic 30.0%
TAATGGAGAATTATTGTAGC+CGG - Chr6:102876218-102876237 None:intergenic 30.0%
TCGGATTATTCGATATATCA+AGG - Chr6:102873406-102873425 None:intergenic 30.0%
TCTAGTGCATTCTGATATTT+GGG - Chr6:102875353-102875372 None:intergenic 30.0%
TGAACAGCATATGAAATATC+CGG + Chr6:102873480-102873499 MsG0680035347.01.T01:intron 30.0%
TGATATATCGAATAATCCGA+AGG + Chr6:102873406-102873425 MsG0680035347.01.T01:intron 30.0%
TGATTTATAATCTGGTGTAG+TGG + Chr6:102874877-102874896 MsG0680035347.01.T01:intron 30.0%
TGTTACAACTGCATGAAAAA+GGG - Chr6:102876150-102876169 None:intergenic 30.0%
TTAGGGATGAGATATGTATT+AGG + Chr6:102875754-102875773 MsG0680035347.01.T01:intron 30.0%
TTCATGTTAAAGAGTTGAAG+AGG + Chr6:102877373-102877392 MsG0680035347.01.T01:intron 30.0%
TTGGAGATTCTCTTATATCT+TGG - Chr6:102873260-102873279 None:intergenic 30.0%
TTGTCACAATATAGATCAGT+CGG + Chr6:102873105-102873124 MsG0680035347.01.T01:intron 30.0%
TTGTGTAAAAGCAAAGTATG+TGG + Chr6:102876503-102876522 MsG0680035347.01.T01:intron 30.0%
! AGATACCATTTAGAATTACC+TGG + Chr6:102875928-102875947 MsG0680035347.01.T01:intron 30.0%
! CATTATGTGTTTCAAGTACA+AGG + Chr6:102872713-102872732 MsG0680035347.01.T01:intron 30.0%
! CTTTTATTGAAAGATAAGGC+TGG + Chr6:102875400-102875419 MsG0680035347.01.T01:intron 30.0%
! GAAATTATTTTCTCTTCCTC+TGG - Chr6:102875685-102875704 None:intergenic 30.0%
! GATCGACTTAAACTTTGATA+AGG + Chr6:102874661-102874680 MsG0680035347.01.T01:intron 30.0%
! TCAACAATCACTTGATGATT+TGG + Chr6:102872266-102872285 MsG0680035347.01.T01:five_prime_UTR 30.0%
! TGTGAAGTTTAGCTTAACAA+AGG + Chr6:102876837-102876856 MsG0680035347.01.T01:intron 30.0%
! TTGATTTGATGAAATTAGCC+AGG + Chr6:102876372-102876391 MsG0680035347.01.T01:intron 30.0%
! TTTAGAATCACGATATTCCA+TGG + Chr6:102875141-102875160 MsG0680035347.01.T01:intron 30.0%
! TTTAGTTTCCAAACTCAAGT+TGG - Chr6:102872902-102872921 None:intergenic 30.0%
! TTTGAATACTAGTCTGAATG+AGG - Chr6:102877119-102877138 None:intergenic 30.0%
!! AGTAGGCTCTAAGAATTAAT+GGG + Chr6:102873343-102873362 MsG0680035347.01.T01:intron 30.0%
!! ATACTACTTCTGAGATATTG+TGG - Chr6:102873173-102873192 None:intergenic 30.0%
!! TTCGATTCATTTGTTTTCCT+GGG - Chr6:102876585-102876604 None:intergenic 30.0%
!! TTTCGATTCATTTGTTTTCC+TGG - Chr6:102876586-102876605 None:intergenic 30.0%
!!! ATGTCAACATTTTGAGATGA+AGG - Chr6:102873748-102873767 None:intergenic 30.0%
!!! ATTTTGAGATGAAGGATCTT+GGG - Chr6:102873740-102873759 None:intergenic 30.0%
!!! GTCATTTTGGTTAGAAATGT+TGG + Chr6:102877826-102877845 MsG0680035347.01.T01:three_prime_UTR 30.0%
!!! TTTGGGTTTTTTGAAATTGG+TGG + Chr6:102872493-102872512 MsG0680035347.01.T01:intron 30.0%
AAACTCTTGTAGGATGCAAA+TGG - Chr6:102874271-102874290 None:intergenic 35.0%
AAATAACCTTGAGACACTAG+AGG + Chr6:102875478-102875497 MsG0680035347.01.T01:intron 35.0%
AAATCCTGATCAGCATCTAT+TGG - Chr6:102877483-102877502 None:intergenic 35.0%
AACACAAAGGTTATCGATGT+TGG - Chr6:102874754-102874773 None:intergenic 35.0%
AACTCTTGTAGGATGCAAAT+GGG - Chr6:102874270-102874289 None:intergenic 35.0%
AAGAGGCCTAATTTGGTATT+TGG + Chr6:102877209-102877228 MsG0680035347.01.T01:intron 35.0%
AATGGAAGAATTTGTGGTAG+CGG + Chr6:102875549-102875568 MsG0680035347.01.T01:intron 35.0%
AATGGAGACAAAGAAACACA+AGG + Chr6:102872760-102872779 MsG0680035347.01.T01:intron 35.0%
AATGTCCAAAATTACGACAC+CGG + Chr6:102876196-102876215 MsG0680035347.01.T01:intron 35.0%
AATTTAGCAAACCAAGCTCT+AGG + Chr6:102873930-102873949 MsG0680035347.01.T01:intron 35.0%
ACAATTGTTAGATTGTGCCA+CGG - Chr6:102876416-102876435 None:intergenic 35.0%
ACACAAAGGTTATCGATGTT+GGG - Chr6:102874753-102874772 None:intergenic 35.0%
ACATTCAACTGTAGGACAAT+TGG + Chr6:102876167-102876186 MsG0680035347.01.T01:intron 35.0%
ACTAATCAATGTAGTCGTGT+GGG - Chr6:102876926-102876945 None:intergenic 35.0%
ACTAGAAGAGAAGAACGAAA+TGG - Chr6:102872193-102872212 None:intergenic 35.0%
AGACGAGTTTGATTCTGATT+CGG + Chr6:102877596-102877615 MsG0680035347.01.T01:CDS 35.0%
AGAGTTATTACCAATGACAG+GGG + Chr6:102874919-102874938 MsG0680035347.01.T01:intron 35.0%
AGATAAGATGAAGTTCACCA+CGG + Chr6:102872989-102873008 MsG0680035347.01.T01:intron 35.0%
AGCCCCAAAAAGTAACTTAA+TGG + Chr6:102873714-102873733 MsG0680035347.01.T01:intron 35.0%
AGCTATGCAGGAAGAATTAT+TGG - Chr6:102874342-102874361 None:intergenic 35.0%
AGGTAGGCTTAAATTAGAGA+GGG + Chr6:102875774-102875793 MsG0680035347.01.T01:intron 35.0%
ATAATTGGCCAACAGAGATA+AGG + Chr6:102875719-102875738 MsG0680035347.01.T01:intron 35.0%
ATATCGAATAATCCGAAGGA+CGG + Chr6:102873410-102873429 MsG0680035347.01.T01:intron 35.0%
ATCAAATGGTGAAGCTGAAA+TGG + Chr6:102875372-102875391 MsG0680035347.01.T01:intron 35.0%
ATTTAGCAAACCAAGCTCTA+GGG + Chr6:102873931-102873950 MsG0680035347.01.T01:intron 35.0%
CAAATGGAAACTCACTCAAA+TGG - Chr6:102874084-102874103 None:intergenic 35.0%
CAATGGTAATCACGAAGATA+AGG + Chr6:102874434-102874453 MsG0680035347.01.T01:intron 35.0%
CAGTTGTAACATTCAACTGT+AGG + Chr6:102876159-102876178 MsG0680035347.01.T01:intron 35.0%
CATAACCAAGGTCACATAAT+TGG + Chr6:102875704-102875723 MsG0680035347.01.T01:intron 35.0%
CATTCAACTGTAGGACAATT+GGG + Chr6:102876168-102876187 MsG0680035347.01.T01:intron 35.0%
CCATACACATCTCAACAAAA+TGG - Chr6:102875073-102875092 None:intergenic 35.0%
CCTTCTGATAAAACTCTTGT+AGG - Chr6:102874281-102874300 None:intergenic 35.0%
CGTGATGTTAAAGCAAAAAG+CGG + Chr6:102877663-102877682 MsG0680035347.01.T01:CDS 35.0%
CTACACCAGGTAATTCTAAA+TGG - Chr6:102875936-102875955 None:intergenic 35.0%
CTAGAAGAGAAGAACGAAAT+GGG - Chr6:102872192-102872211 None:intergenic 35.0%
CTAGTGCATTCTGATATTTG+GGG - Chr6:102875352-102875371 None:intergenic 35.0%
CTAGTGTCTCAAGGTTATTT+AGG - Chr6:102875478-102875497 None:intergenic 35.0%
CTTGAGTTCTTCAATTCCAA+TGG + Chr6:102873776-102873795 MsG0680035347.01.T01:intron 35.0%
GAAAAGAAACTAACACTGTG+AGG + Chr6:102876444-102876463 MsG0680035347.01.T01:intron 35.0%
GAACTTCATCTTATCTCCAT+TGG - Chr6:102872985-102873004 None:intergenic 35.0%
GAGAGTTATTACCAATGACA+GGG + Chr6:102874918-102874937 MsG0680035347.01.T01:intron 35.0%
GAGTAACAGTGAGGTATATT+AGG + Chr6:102873505-102873524 MsG0680035347.01.T01:intron 35.0%
GATTTGATGAGGGATATTCT+AGG + Chr6:102877498-102877517 MsG0680035347.01.T01:CDS 35.0%
GCAATTACCAATTACATGAG+AGG + Chr6:102877720-102877739 MsG0680035347.01.T01:three_prime_UTR 35.0%
GCATTATATCAAACACATGG+AGG - Chr6:102872366-102872385 None:intergenic 35.0%
GGATGAGATATGTATTAGGT+AGG + Chr6:102875758-102875777 MsG0680035347.01.T01:intron 35.0%
GTGATGTTAAAGCAAAAAGC+GGG + Chr6:102877664-102877683 MsG0680035347.01.T01:CDS 35.0%
TAGCAAGAAACAAACATTGG+TGG - Chr6:102873235-102873254 None:intergenic 35.0%
TAGGAAAAAGATCGACATCA+GGG + Chr6:102874609-102874628 MsG0680035347.01.T01:intron 35.0%
TAGGTAGGCTTAAATTAGAG+AGG + Chr6:102875773-102875792 MsG0680035347.01.T01:intron 35.0%
TAGTATACTCATGAGACTGA+AGG + Chr6:102874822-102874841 MsG0680035347.01.T01:intron 35.0%
TATCTTCCTGAGTTTCTACA+TGG - Chr6:102872673-102872692 None:intergenic 35.0%
TCAGAATGCACTAGATCAAA+TGG + Chr6:102875358-102875377 MsG0680035347.01.T01:intron 35.0%
TCATGAACCAGAATCCTATA+AGG - Chr6:102874393-102874412 None:intergenic 35.0%
TGAGTTTGGAAACTAAAGTG+CGG + Chr6:102872905-102872924 MsG0680035347.01.T01:intron 35.0%
TGATGTTAAAGCAAAAAGCG+GGG + Chr6:102877665-102877684 MsG0680035347.01.T01:CDS 35.0%
TGATTCTTCACATTAGCATG+TGG - Chr6:102872240-102872259 None:intergenic 35.0%
TTAGCATGTGGAATAGTAGA+AGG - Chr6:102872228-102872247 None:intergenic 35.0%
TTCACAAAATCTCATTCTCC+AGG - Chr6:102872937-102872956 None:intergenic 35.0%
TTCATGTTGAAGAGTTGAAG+CGG + Chr6:102877026-102877045 MsG0680035347.01.T01:intron 35.0%
TTGAAGGTGAAGATTTGAAG+GGG - Chr6:102872152-102872171 None:intergenic 35.0%
TTGATACCATGTAGAAACTC+AGG + Chr6:102876616-102876635 MsG0680035347.01.T01:intron 35.0%
TTGGAAGACATAAGCAATGA+AGG + Chr6:102872285-102872304 MsG0680035347.01.T01:exon 35.0%
TTGTAGAGAGAGAGAATTGA+AGG - Chr6:102872168-102872187 None:intergenic 35.0%
TTGTTGTCGATACTGTAAGA+CGG - Chr6:102876112-102876131 None:intergenic 35.0%
! CCATTTTGTTGAGATGTGTA+TGG + Chr6:102875070-102875089 MsG0680035347.01.T01:intron 35.0%
! GAAGCATAGTGGAATAACAA+TGG + Chr6:102874417-102874436 MsG0680035347.01.T01:intron 35.0%
! GAAGTATTATCTTCGAGTGA+TGG - Chr6:102873693-102873712 None:intergenic 35.0%
! GATTTTGTGAACAAATCAGC+CGG + Chr6:102872946-102872965 MsG0680035347.01.T01:intron 35.0%
! TGGGACAATTTTGAATCAAG+TGG + Chr6:102876082-102876101 MsG0680035347.01.T01:intron 35.0%
! TTGTCTTTTCTTAGTGAGCA+GGG - Chr6:102875118-102875137 None:intergenic 35.0%
! TTTAGAATTACCTGGTGTAG+TGG + Chr6:102875936-102875955 MsG0680035347.01.T01:intron 35.0%
! TTTTCCTGACATGTATATCC+TGG + Chr6:102873999-102874018 MsG0680035347.01.T01:intron 35.0%
! TTTTTGTGTTCGTGTTGAAG+AGG + Chr6:102877192-102877211 MsG0680035347.01.T01:intron 35.0%
!! AAGTGGATTGAACATCAGAA+GGG + Chr6:102874531-102874550 MsG0680035347.01.T01:intron 35.0%
!! AATCGAACATTTGGTTCTAG+AGG + Chr6:102873588-102873607 MsG0680035347.01.T01:intron 35.0%
!! ACAAGAGTTTTATCAGAAGG+AGG + Chr6:102874281-102874300 MsG0680035347.01.T01:intron 35.0%
!! AGTATTGCAGAGGTATTTGA+AGG + Chr6:102877452-102877471 MsG0680035347.01.T01:CDS 35.0%
!! CCTACAAGAGTTTTATCAGA+AGG + Chr6:102874278-102874297 MsG0680035347.01.T01:intron 35.0%
!! GAGTAGGCTCTAAGAATTAA+TGG + Chr6:102873342-102873361 MsG0680035347.01.T01:intron 35.0%
!! GTAGGCTCTAAGAATTAATG+GGG + Chr6:102873344-102873363 MsG0680035347.01.T01:intron 35.0%
!! GTATTGCAGAGGTATTTGAA+GGG + Chr6:102877453-102877472 MsG0680035347.01.T01:CDS 35.0%
!! TATAGGATTCTGGTTCATGA+TGG + Chr6:102874393-102874412 MsG0680035347.01.T01:intron 35.0%
!! TATTGCAGAGGTATTTGAAG+GGG + Chr6:102877454-102877473 MsG0680035347.01.T01:CDS 35.0%
!! TCGATTCATTTGTTTTCCTG+GGG - Chr6:102876584-102876603 None:intergenic 35.0%
!! TTGAGACAACTTTTTCCTTC+TGG - Chr6:102875982-102876001 None:intergenic 35.0%
!!! CATTTTGAGATGAAGGATCT+TGG - Chr6:102873741-102873760 None:intergenic 35.0%
!!! CTGTGTTGTTTTCTTGGTTA+TGG - Chr6:102874782-102874801 None:intergenic 35.0%
!!! GGCCATTAAGTTACTTTTTG+GGG - Chr6:102873719-102873738 None:intergenic 35.0%
!!! GGGCCATTAAGTTACTTTTT+GGG - Chr6:102873720-102873739 None:intergenic 35.0%
!!! TGGGCCATTAAGTTACTTTT+TGG - Chr6:102873721-102873740 None:intergenic 35.0%
AAAGCTCGTCTTGTAGCAAA+AGG - Chr6:102874203-102874222 None:intergenic 40.0%
AAGCTCGTCTTGTAGCAAAA+GGG - Chr6:102874202-102874221 None:intergenic 40.0%
AATACTGCCTCAAAGACTTC+TGG - Chr6:102877438-102877457 None:intergenic 40.0%
AATAGCTTTCTACAGGAGCT+CGG - Chr6:102876343-102876362 None:intergenic 40.0%
ACCACTGGAAGAAGTCAATT+GGG + Chr6:102876283-102876302 MsG0680035347.01.T01:intron 40.0%
ACTCTTTATCGGCAACTTGT+AGG - Chr6:102873534-102873553 None:intergenic 40.0%
AGCTTCAACCAACTTGAGTT+TGG + Chr6:102872891-102872910 MsG0680035347.01.T01:intron 40.0%
ATGCGAATACGTTGGGATAT+TGG + Chr6:102874725-102874744 MsG0680035347.01.T01:intron 40.0%
ATGCTGATCAGGATTTGATG+AGG + Chr6:102877487-102877506 MsG0680035347.01.T01:CDS 40.0%
ATTCCATGGCATTATCTCGT+CGG + Chr6:102875155-102875174 MsG0680035347.01.T01:intron 40.0%
ATTGGAGAAAACCCACACAT+GGG - Chr6:102874318-102874337 None:intergenic 40.0%
CTACATGGTATCAAGAGCTT+AGG - Chr6:102876610-102876629 None:intergenic 40.0%
CTAGAACCCTCTCATGTAAT+TGG - Chr6:102877730-102877749 None:intergenic 40.0%
CTAGGAAAAAGATCGACATC+AGG + Chr6:102874608-102874627 MsG0680035347.01.T01:intron 40.0%
CTGAGTTTCTACACCCAAAA+AGG - Chr6:102872666-102872685 None:intergenic 40.0%
GAAATTAGCCAGGTTGCAAT+TGG + Chr6:102876382-102876401 MsG0680035347.01.T01:intron 40.0%
GACTAATCAATGTAGTCGTG+TGG - Chr6:102876927-102876946 None:intergenic 40.0%
GCACAAATGTTGGACTCAAT+AGG + Chr6:102875571-102875590 MsG0680035347.01.T01:intron 40.0%
GCAGGAAGAATTATTGGCAT+TGG - Chr6:102874336-102874355 None:intergenic 40.0%
GCGTAGCAAGAAACAAACAT+TGG - Chr6:102873238-102873257 None:intergenic 40.0%
GGAGAGTTATTACCAATGAC+AGG + Chr6:102874917-102874936 MsG0680035347.01.T01:intron 40.0%
GTCGATGACATGATTATCAC+TGG - Chr6:102873810-102873829 None:intergenic 40.0%
GTGGAATAAAGACGCTCAAA+AGG + Chr6:102874896-102874915 MsG0680035347.01.T01:intron 40.0%
TAAATTGGCCAATTGCAACC+TGG - Chr6:102876393-102876412 None:intergenic 40.0%
TAATCACGAAGATAAGGAGG+TGG + Chr6:102874440-102874459 MsG0680035347.01.T01:intron 40.0%
TAGATTGTGCCACGGTAAAT+TGG - Chr6:102876408-102876427 None:intergenic 40.0%
TATACTCATGAGACTGAAGG+AGG + Chr6:102874825-102874844 MsG0680035347.01.T01:intron 40.0%
TATCAGAAGGAGGATCAACA+AGG + Chr6:102874291-102874310 MsG0680035347.01.T01:intron 40.0%
TCACACCAATAGCTTTCTAC+AGG - Chr6:102876350-102876369 None:intergenic 40.0%
TGAGGAGTGAATCGAACATT+TGG + Chr6:102873579-102873598 MsG0680035347.01.T01:intron 40.0%
TGCAATTCCAGAAGTCTTTG+AGG + Chr6:102877428-102877447 MsG0680035347.01.T01:CDS 40.0%
TGCGAATACGTTGGGATATT+GGG + Chr6:102874726-102874745 MsG0680035347.01.T01:intron 40.0%
TGCTGATCAGGATTTGATGA+GGG + Chr6:102877488-102877507 MsG0680035347.01.T01:CDS 40.0%
TGGTAATCACGAAGATAAGG+AGG + Chr6:102874437-102874456 MsG0680035347.01.T01:intron 40.0%
TTATTACCAATGACAGGGGA+AGG + Chr6:102874923-102874942 MsG0680035347.01.T01:intron 40.0%
TTCTAACTCGCCATTGAGAA+AGG + Chr6:102874046-102874065 MsG0680035347.01.T01:intron 40.0%
! AAGGTCACGTTTTCATTCGT+TGG - Chr6:102876471-102876490 None:intergenic 40.0%
! ACATCAGGGTTAGTAAAGAG+AGG + Chr6:102874623-102874642 MsG0680035347.01.T01:intron 40.0%
! ATGAGGGATATTCTAGGGAA+GGG + Chr6:102877504-102877523 MsG0680035347.01.T01:CDS 40.0%
! CGTCTTGCTCATAGTTCTAT+CGG - Chr6:102875514-102875533 None:intergenic 40.0%
! CTCTCGTCATGTTGTCTTTT+GGG - Chr6:102874705-102874724 None:intergenic 40.0%
! GTTGTCTTTTCTTAGTGAGC+AGG - Chr6:102875119-102875138 None:intergenic 40.0%
! TAGATTTTTCCCGCCTATCT+GGG + Chr6:102876899-102876918 MsG0680035347.01.T01:intron 40.0%
! TAGTCTTAGTCTCCGTAGTT+GGG + Chr6:102876942-102876961 MsG0680035347.01.T01:intron 40.0%
! TCTCTCGTCATGTTGTCTTT+TGG - Chr6:102874706-102874725 None:intergenic 40.0%
! TTCATGATGGTGAAGCATAG+TGG + Chr6:102874406-102874425 MsG0680035347.01.T01:intron 40.0%
! TTTAGCAAACCAAGCTCTAG+GGG + Chr6:102873932-102873951 MsG0680035347.01.T01:intron 40.0%
!! AGTGGATTGAACATCAGAAG+GGG + Chr6:102874532-102874551 MsG0680035347.01.T01:intron 40.0%
!! ATTGCAGAGGTATTTGAAGG+GGG + Chr6:102877455-102877474 MsG0680035347.01.T01:CDS 40.0%
!! CAGTGACTCTGATTTTGAAG+AGG + Chr6:102877626-102877645 MsG0680035347.01.T01:CDS 40.0%
!! GAAGTGGATTGAACATCAGA+AGG + Chr6:102874530-102874549 MsG0680035347.01.T01:intron 40.0%
!! GAGTTTGATTCTGATTCGGA+GGG + Chr6:102877600-102877619 MsG0680035347.01.T01:CDS 40.0%
!! TTAGTCTTAGTCTCCGTAGT+TGG + Chr6:102876941-102876960 MsG0680035347.01.T01:intron 40.0%
!! TTCTGATTTTGATCAGACCG+TGG + Chr6:102876051-102876070 MsG0680035347.01.T01:intron 40.0%
!!! CTTTTTGGGTGTAGAAACTC+AGG + Chr6:102872664-102872683 MsG0680035347.01.T01:intron 40.0%
AAAATACCGAGAACCTCCCA+TGG + Chr6:102875309-102875328 MsG0680035347.01.T01:intron 45.0%
AAAGGGTTCACTCAGGAGTA+TGG - Chr6:102874185-102874204 None:intergenic 45.0%
AAGAGAGGAGTGGAAGTAGA+CGG + Chr6:102874638-102874657 MsG0680035347.01.T01:intron 45.0%
AATGAGACGCTCATGTCATG+TGG + Chr6:102875887-102875906 MsG0680035347.01.T01:intron 45.0%
ACAAGAGGCTGAGATAAGCA+TGG + Chr6:102875003-102875022 MsG0680035347.01.T01:intron 45.0%
ACGACGATGCCAAAGTTGAA+TGG + Chr6:102875531-102875550 MsG0680035347.01.T01:intron 45.0%
ACGAGAGATGCGAATACGTT+GGG + Chr6:102874718-102874737 MsG0680035347.01.T01:intron 45.0%
AGAGGGAGATAGAACCTGTA+TGG + Chr6:102875791-102875810 MsG0680035347.01.T01:intron 45.0%
AGAGTCGAATGACGATGATG+AGG + Chr6:102877530-102877549 MsG0680035347.01.T01:CDS 45.0%
AGATTCGGAAGACGATGATG+AGG + Chr6:102877566-102877585 MsG0680035347.01.T01:CDS 45.0%
AGTGAGTTTCCATTTGCGAG+TGG + Chr6:102874088-102874107 MsG0680035347.01.T01:intron 45.0%
ATACCTCACTGTTACTCGTC+CGG - Chr6:102873502-102873521 None:intergenic 45.0%
ATCAACAAGGTCCCATGTGT+GGG + Chr6:102874304-102874323 MsG0680035347.01.T01:intron 45.0%
ATCTGTGGAGGCTTCCTTAT+AGG + Chr6:102874376-102874395 MsG0680035347.01.T01:intron 45.0%
CAATGGCGAGTTAGAAGAAG+AGG - Chr6:102874042-102874061 None:intergenic 45.0%
CACCACTGGAAGAAGTCAAT+TGG + Chr6:102876282-102876301 MsG0680035347.01.T01:intron 45.0%
CATTGGAGAAAACCCACACA+TGG - Chr6:102874319-102874338 None:intergenic 45.0%
CATTGGCACTCTTGATCAAC+CGG - Chr6:102872968-102872987 None:intergenic 45.0%
CCACTGGAAGAAGTCAATTG+GGG + Chr6:102876284-102876303 MsG0680035347.01.T01:intron 45.0%
CGAATGACGATGATGAGGTA+GGG + Chr6:102877535-102877554 MsG0680035347.01.T01:CDS 45.0%
CGTGTTGAAGAGGCCTAATT+TGG + Chr6:102877202-102877221 MsG0680035347.01.T01:intron 45.0%
CTCGTGGAAAACGTCATTGT+GGG + Chr6:102873062-102873081 MsG0680035347.01.T01:intron 45.0%
CTGAGATATTGTGGCTTCGT+TGG - Chr6:102873164-102873183 None:intergenic 45.0%
CTTATGCACGTAAGCCATAC+AGG - Chr6:102875808-102875827 None:intergenic 45.0%
GAGACATATGCAGGTTCTTC+TGG - Chr6:102874569-102874588 None:intergenic 45.0%
GAGCTCCTGTAGAAAGCTAT+TGG + Chr6:102876342-102876361 MsG0680035347.01.T01:intron 45.0%
GAGGCTTCCTTATAGGATTC+TGG + Chr6:102874383-102874402 MsG0680035347.01.T01:intron 45.0%
GATTGAACATCAGAAGGGGT+TGG + Chr6:102874536-102874555 MsG0680035347.01.T01:intron 45.0%
GCATGTGGAATAGTAGAAGG+TGG - Chr6:102872225-102872244 None:intergenic 45.0%
GGCTCTTTATGGTCTCAAAC+AGG - Chr6:102873958-102873977 None:intergenic 45.0%
GTGGAATAGTAGAAGGTGGA+GGG - Chr6:102872221-102872240 None:intergenic 45.0%
GTGTGACGTTGAGATGAACA+AGG + Chr6:102876538-102876557 MsG0680035347.01.T01:intron 45.0%
GTTCGATTCACTCCTCAAGA+TGG - Chr6:102873576-102873595 None:intergenic 45.0%
GTTGGCCAATTATGTGACCT+TGG - Chr6:102875712-102875731 None:intergenic 45.0%
TAAGAGATCCATCAGCAGTG+TGG + Chr6:102875824-102875843 MsG0680035347.01.T01:intron 45.0%
TCCTCCAGGATATACATGTC+AGG - Chr6:102874006-102874025 None:intergenic 45.0%
TCCTGACATGTATATCCTGG+AGG + Chr6:102874002-102874021 MsG0680035347.01.T01:intron 45.0%
TCGAATGACGATGATGAGGT+AGG + Chr6:102877534-102877553 MsG0680035347.01.T01:CDS 45.0%
TGACATGTATATCCTGGAGG+AGG + Chr6:102874005-102874024 MsG0680035347.01.T01:intron 45.0%
TGCAATTGGCCAATTTACCG+TGG + Chr6:102876396-102876415 MsG0680035347.01.T01:intron 45.0%
TGTAGCAAAAGGGTTCACTC+AGG - Chr6:102874192-102874211 None:intergenic 45.0%
TGTCGATACTGTAAGACGGT+TGG - Chr6:102876108-102876127 None:intergenic 45.0%
TGTGGAATAGTAGAAGGTGG+AGG - Chr6:102872222-102872241 None:intergenic 45.0%
TTTCCGACGAGATAATGCCA+TGG - Chr6:102875161-102875180 None:intergenic 45.0%
TTTCCTAGTGACACACATGC+AGG - Chr6:102874596-102874615 None:intergenic 45.0%
! AGCCTACTCTGATGCTGATT+GGG - Chr6:102873331-102873350 None:intergenic 45.0%
! AGGGTTAGTAAAGAGAGGAG+TGG + Chr6:102874628-102874647 MsG0680035347.01.T01:intron 45.0%
! ATCACTGGTGATGACTCCAT+TGG - Chr6:102873795-102873814 None:intergenic 45.0%
! CAATATGTTTGGTTCGCTCG+TGG + Chr6:102873046-102873065 MsG0680035347.01.T01:intron 45.0%
! GATGAGGGATATTCTAGGGA+AGG + Chr6:102877503-102877522 MsG0680035347.01.T01:CDS 45.0%
! GGTTATGGCACTGAACACAA+AGG - Chr6:102874767-102874786 None:intergenic 45.0%
! GTAGATTTTTCCCGCCTATC+TGG + Chr6:102876898-102876917 MsG0680035347.01.T01:intron 45.0%
! TGAGGGATATTCTAGGGAAG+GGG + Chr6:102877505-102877524 MsG0680035347.01.T01:CDS 45.0%
!! AGTTCGAACAGAGTTGATGC+GGG + Chr6:102874127-102874146 MsG0680035347.01.T01:intron 45.0%
!! CGAGTTTGATTCTGATTCGG+AGG + Chr6:102877599-102877618 MsG0680035347.01.T01:CDS 45.0%
!! GAGTTCGAACAGAGTTGATG+CGG + Chr6:102874126-102874145 MsG0680035347.01.T01:intron 45.0%
!! TCTTTGAGGCAGTATTGCAG+AGG + Chr6:102877442-102877461 MsG0680035347.01.T01:CDS 45.0%
!! TGATGGTTTGTTTCTCTCGC+AGG - Chr6:102873676-102873695 None:intergenic 45.0%
!! TGATTTTGATCAGACCGTGG+AGG + Chr6:102876054-102876073 MsG0680035347.01.T01:intron 45.0%
!!! TGTAGCCGGTGTCGTAATTT+TGG - Chr6:102876204-102876223 None:intergenic 45.0%
AAGAGCAGAGTCATGAGCAC+TGG + Chr6:102873875-102873894 MsG0680035347.01.T01:intron 50.0%
AAGGACGGCTGCATAATGTG+TGG + Chr6:102873425-102873444 MsG0680035347.01.T01:intron 50.0%
ACGACGATCACTAGGATCAC+CGG + Chr6:102873305-102873324 MsG0680035347.01.T01:intron 50.0%
ACTAAAGTGCGGAAACGTCC+TGG + Chr6:102872916-102872935 MsG0680035347.01.T01:intron 50.0%
AGAGAGGAGTGGAAGTAGAC+GGG + Chr6:102874639-102874658 MsG0680035347.01.T01:intron 50.0%
AGGCTGAGATAAGCATGGCA+CGG + Chr6:102875008-102875027 MsG0680035347.01.T01:intron 50.0%
ATAGGGACTGGGCGTAAGAT+CGG - Chr6:102875628-102875647 None:intergenic 50.0%
ATCCCCCCTCAAACTCAAGT+GGG + Chr6:102872865-102872884 MsG0680035347.01.T01:intron 50.0%
ATTCGTCAGCATCTTCTCCG+TGG - Chr6:102873009-102873028 None:intergenic 50.0%
CAATTGCTGCCACTCGCAAA+TGG - Chr6:102874100-102874119 None:intergenic 50.0%
CACATTATGCAGCCGTCCTT+CGG - Chr6:102873425-102873444 None:intergenic 50.0%
CCATCAGCAGTGTGGATAGA+AGG + Chr6:102875832-102875851 MsG0680035347.01.T01:intron 50.0%
CCTTCTATCCACACTGCTGA+TGG - Chr6:102875835-102875854 None:intergenic 50.0%
CGACTTCGCAAGGCTCTTTA+TGG - Chr6:102873969-102873988 None:intergenic 50.0%
CGGAACAACGTCATCAGAAG+TGG + Chr6:102874514-102874533 MsG0680035347.01.T01:intron 50.0%
CTAAACTTGAACCGCGTGCT+CGG - Chr6:102874805-102874824 None:intergenic 50.0%
CTCTTGTCCTGAACGTGCTT+GGG - Chr6:102874990-102875009 None:intergenic 50.0%
GACGAGAGATGCGAATACGT+TGG + Chr6:102874717-102874736 MsG0680035347.01.T01:intron 50.0%
GACGATGATGAGGTAGGGAA+GGG + Chr6:102877540-102877559 MsG0680035347.01.T01:CDS 50.0%
GAGCCTACTCTGATGCTGAT+TGG - Chr6:102873332-102873351 None:intergenic 50.0%
GATCAACAAGGTCCCATGTG+TGG + Chr6:102874303-102874322 MsG0680035347.01.T01:intron 50.0%
GCTCGTGGAAAACGTCATTG+TGG + Chr6:102873061-102873080 MsG0680035347.01.T01:intron 50.0%
GGAGCCAATAGATGCTGATC+AGG + Chr6:102877476-102877495 MsG0680035347.01.T01:CDS 50.0%
GGTAGGGAAGGGAACAGATT+CGG + Chr6:102877551-102877570 MsG0680035347.01.T01:CDS 50.0%
TACAGTCAGTGAGACCTGCT+CGG + Chr6:102873625-102873644 MsG0680035347.01.T01:intron 50.0%
TATCCGGACGAGTAACAGTG+AGG + Chr6:102873496-102873515 MsG0680035347.01.T01:intron 50.0%
TCTTGTCCTGAACGTGCTTG+GGG - Chr6:102874989-102875008 None:intergenic 50.0%
TGACGATGATGAGGTAGGGA+AGG + Chr6:102877539-102877558 MsG0680035347.01.T01:CDS 50.0%
TTGCGTCCTCTAGTGTCTCA+AGG - Chr6:102875487-102875506 None:intergenic 50.0%
! CCCCAATTGACTTCTTCCAG+TGG - Chr6:102876287-102876306 None:intergenic 50.0%
! GAACCTGCATGTGTGTCACT+AGG + Chr6:102874590-102874609 MsG0680035347.01.T01:intron 50.0%
! TACTCAAGAAGGCACACCAC+TGG + Chr6:102876268-102876287 MsG0680035347.01.T01:intron 50.0%
! TACTCTGATGCTGATTGGGC+CGG - Chr6:102873327-102873346 None:intergenic 50.0%
!! CAAGGTATGTCGACTTCGCA+AGG - Chr6:102873979-102873998 None:intergenic 50.0%
!! CGGTTGATCAAGAGTGCCAA+TGG + Chr6:102872966-102872985 MsG0680035347.01.T01:intron 50.0%
!! GCAGCAGGAGTATTACCAGA+AGG + Chr6:102875964-102875983 MsG0680035347.01.T01:intron 50.0%
!! GCAGGTTCTGAGACATATGC+AGG - Chr6:102874578-102874597 None:intergenic 50.0%
!! TGTGGTAGCGGCACAAATGT+TGG + Chr6:102875561-102875580 MsG0680035347.01.T01:intron 50.0%
!!! GCTCGGCTGTGTTGTTTTCT+TGG - Chr6:102874788-102874807 None:intergenic 50.0%
AAACAACACAGCCGAGCACG+CGG + Chr6:102874791-102874810 MsG0680035347.01.T01:intron 55.0%
AAGCCTCCACAGATCCTCGT+TGG - Chr6:102874370-102874389 None:intergenic 55.0%
ACAGTCAGTGAGACCTGCTC+GGG + Chr6:102873626-102873645 MsG0680035347.01.T01:intron 55.0%
ACCGGACAACTCATAGGGAC+TGG - Chr6:102875640-102875659 None:intergenic 55.0%
AGAACCTCCCATGGTAGGTG+TGG + Chr6:102875318-102875337 MsG0680035347.01.T01:intron 55.0%
AGAGACGAATACGACGTGCG+TGG - Chr6:102872125-102872144 None:intergenic 55.0%
AGTGATCGTCGTTCCACCAC+TGG - Chr6:102873297-102873316 None:intergenic 55.0%
ATCCTGCACACGACATCCAG+AGG + Chr6:102875666-102875685 MsG0680035347.01.T01:intron 55.0%
ATTGTCCCACTCGTCCTCCA+CGG - Chr6:102876071-102876090 None:intergenic 55.0%
CACCTACCATGGGAGGTTCT+CGG - Chr6:102875318-102875337 None:intergenic 55.0%
CACGGACCGGACAACTCATA+GGG - Chr6:102875645-102875664 None:intergenic 55.0%
CATCCCCCCTCAAACTCAAG+TGG + Chr6:102872864-102872883 MsG0680035347.01.T01:intron 55.0%
CCAAGCACGTTCAGGACAAG+AGG + Chr6:102874988-102875007 MsG0680035347.01.T01:intron 55.0%
CCCAGTCCCTATGAGTTGTC+CGG + Chr6:102875636-102875655 MsG0680035347.01.T01:intron 55.0%
CCGGACAACTCATAGGGACT+GGG - Chr6:102875639-102875658 None:intergenic 55.0%
CCTCTTGTCCTGAACGTGCT+TGG - Chr6:102874991-102875010 None:intergenic 55.0%
CGTCTTCCTTCCCCTGTCAT+TGG - Chr6:102874932-102874951 None:intergenic 55.0%
CTCCGCCCACTTGAGTTTGA+GGG - Chr6:102872873-102872892 None:intergenic 55.0%
GAACCTCCCATGGTAGGTGT+GGG + Chr6:102875319-102875338 MsG0680035347.01.T01:intron 55.0%
GATGTCGTGTGCAGGATCCA+CGG - Chr6:102875663-102875682 None:intergenic 55.0%
GCTGCATAATGTGTGGTGCG+TGG + Chr6:102873432-102873451 MsG0680035347.01.T01:intron 55.0%
GCTGCTCTTTCCACTACACC+AGG - Chr6:102875949-102875968 None:intergenic 55.0%
GGCCCAATCAGCATCAGAGT+AGG + Chr6:102873326-102873345 MsG0680035347.01.T01:intron 55.0%
GTTTACATGCGTCCTCCTCC+AGG - Chr6:102874020-102874039 None:intergenic 55.0%
TACCCTCGGAGGAAGCTCAA+CGG + Chr6:102874469-102874488 MsG0680035347.01.T01:intron 55.0%
TACCGAGAACCTCCCATGGT+AGG + Chr6:102875313-102875332 MsG0680035347.01.T01:intron 55.0%
TAGTCGTGTGGGACCCAGAT+AGG - Chr6:102876915-102876934 None:intergenic 55.0%
TCAAACAGGCCCCTAGAGCT+TGG - Chr6:102873944-102873963 None:intergenic 55.0%
TCCGCCCACTTGAGTTTGAG+GGG - Chr6:102872872-102872891 None:intergenic 55.0%
TCGTTGGCAGCAAGCTATGC+AGG - Chr6:102874354-102874373 None:intergenic 55.0%
TCTGATCTTGTCTCCCGAGC+AGG - Chr6:102873642-102873661 None:intergenic 55.0%
TTAGTCTCCGTAGTTGGGCG+CGG + Chr6:102876947-102876966 MsG0680035347.01.T01:intron 55.0%
TTCCTCTGGATGTCGTGTGC+AGG - Chr6:102875671-102875690 None:intergenic 55.0%
TTGCTGCCAACGAGGATCTG+TGG + Chr6:102874361-102874380 MsG0680035347.01.T01:intron 55.0%
! AGTTGAAGAGGCGCGTTGCA+AGG + Chr6:102877385-102877404 MsG0680035347.01.T01:intron 55.0%
! GGTGTAGTGGAAAGAGCAGC+AGG + Chr6:102875949-102875968 MsG0680035347.01.T01:intron 55.0%
! GTGGTGGAACGACGATCACT+AGG + Chr6:102873297-102873316 MsG0680035347.01.T01:intron 55.0%
!! ACAGAGTTGATGCGGGCAAC+AGG + Chr6:102874134-102874153 MsG0680035347.01.T01:intron 55.0%
!! AGAGTTGATGCGGGCAACAG+GGG + Chr6:102874136-102874155 MsG0680035347.01.T01:intron 55.0%
!! CAGAGTTGATGCGGGCAACA+GGG + Chr6:102874135-102874154 MsG0680035347.01.T01:intron 55.0%
!! GGAGGTGGATTGCTTACCCT+CGG + Chr6:102874455-102874474 MsG0680035347.01.T01:intron 55.0%
!! TGCATAGCTTGCTGCCAACG+AGG + Chr6:102874353-102874372 MsG0680035347.01.T01:intron 55.0%
ATCAGACCGTGGAGGACGAG+TGG + Chr6:102876062-102876081 MsG0680035347.01.T01:intron 60.0%
CACCGTTGAGCTTCCTCCGA+GGG - Chr6:102874474-102874493 None:intergenic 60.0%
CCACGGACCGGACAACTCAT+AGG - Chr6:102875646-102875665 None:intergenic 60.0%
CCATGGTAGGTGTGGGAGCA+GGG + Chr6:102875326-102875345 MsG0680035347.01.T01:intron 60.0%
CCCCCTCAAACTCAAGTGGG+CGG + Chr6:102872868-102872887 MsG0680035347.01.T01:intron 60.0%
CCGCCCACTTGAGTTTGAGG+GGG - Chr6:102872871-102872890 None:intergenic 60.0%
CCTATGAGTTGTCCGGTCCG+TGG + Chr6:102875643-102875662 MsG0680035347.01.T01:intron 60.0%
CCTGCTCCCACACCTACCAT+GGG - Chr6:102875328-102875347 None:intergenic 60.0%
CGCCCACTTGAGTTTGAGGG+GGG - Chr6:102872870-102872889 None:intergenic 60.0%
CGCGTTGCAAGGCTTCGAGA+AGG + Chr6:102877396-102877415 MsG0680035347.01.T01:CDS 60.0%
CTCGGAGGAAGCTCAACGGT+GGG + Chr6:102874473-102874492 MsG0680035347.01.T01:intron 60.0%
CTGCCAACGAGGATCTGTGG+AGG + Chr6:102874364-102874383 MsG0680035347.01.T01:intron 60.0%
GCTCCGCCCACTTGAGTTTG+AGG - Chr6:102872874-102872893 None:intergenic 60.0%
GCTTCACCCCAAGCACGTTC+AGG + Chr6:102874980-102874999 MsG0680035347.01.T01:intron 60.0%
GGACTGGGCGTAAGATCGGA+AGG - Chr6:102875624-102875643 None:intergenic 60.0%
GTAGTTGGGCGCGGAGGATA+CGG + Chr6:102876956-102876975 MsG0680035347.01.T01:intron 60.0%
GTATCCTCCGCGCCCAACTA+CGG - Chr6:102876957-102876976 None:intergenic 60.0%
TAGTTGGGCGCGGAGGATAC+GGG + Chr6:102876957-102876976 MsG0680035347.01.T01:intron 60.0%
TCAGACCGTGGAGGACGAGT+GGG + Chr6:102876063-102876082 MsG0680035347.01.T01:intron 60.0%
TCGTGTGGGACCCAGATAGG+CGG - Chr6:102876912-102876931 None:intergenic 60.0%
! GGAGGTGCAGGATCAACGGT+CGG + Chr6:102874494-102874513 MsG0680035347.01.T01:intron 60.0%
! GGTGGGAGGTGCAGGATCAA+CGG + Chr6:102874490-102874509 MsG0680035347.01.T01:intron 60.0%
!! GGTGGATTGCTTACCCTCGG+AGG + Chr6:102874458-102874477 MsG0680035347.01.T01:intron 60.0%
AGTTGGGCGCGGAGGATACG+GGG + Chr6:102876958-102876977 MsG0680035347.01.T01:intron 65.0%
CCACCGTTGAGCTTCCTCCG+AGG - Chr6:102874475-102874494 None:intergenic 65.0%
CCCATGGTAGGTGTGGGAGC+AGG + Chr6:102875325-102875344 MsG0680035347.01.T01:intron 65.0%
CCCTGCTCCCACACCTACCA+TGG - Chr6:102875329-102875348 None:intergenic 65.0%
CCTCGGAGGAAGCTCAACGG+TGG + Chr6:102874472-102874491 MsG0680035347.01.T01:intron 65.0%
CGTGTGCAGGATCCACGGAC+CGG - Chr6:102875658-102875677 None:intergenic 65.0%
CGTGTGGGACCCAGATAGGC+GGG - Chr6:102876911-102876930 None:intergenic 65.0%
GCTCCCACACCTACCATGGG+AGG - Chr6:102875325-102875344 None:intergenic 65.0%
GGAGGAAGCTCAACGGTGGG+AGG + Chr6:102874476-102874495 MsG0680035347.01.T01:intron 65.0%
! AGCTCAACGGTGGGAGGTGC+AGG + Chr6:102874482-102874501 MsG0680035347.01.T01:intron 65.0%
GTCTCCGTAGTTGGGCGCGG+AGG + Chr6:102876950-102876969 MsG0680035347.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 102872028 102877899 102872028 ID=MsG0680035347.01;Name=MsG0680035347.01
Chr6 mRNA 102872028 102877899 102872028 ID=MsG0680035347.01.T01;Parent=MsG0680035347.01;Name=MsG0680035347.01.T01;_AED=0.37;_eAED=0.37;_QI=273|0|0.5|1|0|0.5|2|195|107
Chr6 exon 102872028 102872306 102872028 ID=MsG0680035347.01.T01:exon:10984;Parent=MsG0680035347.01.T01
Chr6 exon 102877387 102877899 102877387 ID=MsG0680035347.01.T01:exon:10985;Parent=MsG0680035347.01.T01
Chr6 five_prime_UTR 102872028 102872300 102872028 ID=MsG0680035347.01.T01:five_prime_utr;Parent=MsG0680035347.01.T01
Chr6 CDS 102872301 102872306 102872301 ID=MsG0680035347.01.T01:cds;Parent=MsG0680035347.01.T01
Chr6 CDS 102877387 102877704 102877387 ID=MsG0680035347.01.T01:cds;Parent=MsG0680035347.01.T01
Chr6 three_prime_UTR 102877705 102877899 102877705 ID=MsG0680035347.01.T01:three_prime_utr;Parent=MsG0680035347.01.T01
Gene Sequence

>MsG0680035347.01.T01

ATGAAGTTGAAGAGGCGCGTTGCAAGGCTTCGAGAAGGCGATGATGATGCAATTCCAGAAGTCTTTGAGGCAGTATTGCAGAGGTATTTGAAGGGGGAGCCAATAGATGCTGATCAGGATTTGATGAGGGATATTCTAGGGAAGGGGACAGAGTCGAATGACGATGATGAGGTAGGGAAGGGAACAGATTCGGAAGACGATGATGAGGAAAATGAAGACGAGTTTGATTCTGATTCGGAGGGAATCAGTGACTCTGATTTTGAAGAGGAAGAAGCTTTTAATCGTGATGTTAAAGCAAAAAGCGGGGTCAATTTAATGAAGTGA
Protein sequence

>MsG0680035347.01.T01

MKLKRRVARLREGDDDAIPEVFEAVLQRYLKGEPIDADQDLMRDILGKGTESNDDDEVGKGTDSEDDDEENEDEFDSDSEGISDSDFEEEEAFNRDVKAKSGVNLMK*