AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042164.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042164.01.T01 MTR_0096s0020 96.923 260 7 1 1 259 1 260 0.0 508
MsG0880042164.01.T01 MTR_8g467540 26.154 260 173 6 39 284 62 316 1.14e-17 82.4
MsG0880042164.01.T01 MTR_8g467540 26.154 260 173 6 39 284 62 316 1.14e-17 82.4
MsG0880042164.01.T01 MTR_1g099420 34.021 97 64 0 188 284 238 334 1.76e-12 67.4
MsG0880042164.01.T01 MTR_8g099085 29.932 147 91 2 150 284 189 335 2.43e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042164.01.T01 AT2G20725 50.000 238 115 3 55 290 66 301 9.38e-78 239
MsG0880042164.01.T01 AT1G14270 28.014 282 171 6 26 292 74 338 1.39e-18 85.1
MsG0880042164.01.T01 AT1G14270 42.000 100 58 0 193 292 113 212 1.49e-18 82.8
MsG0880042164.01.T01 AT1G14270 42.000 100 58 0 193 292 113 212 1.49e-18 82.8
MsG0880042164.01.T01 AT1G14270 42.000 100 58 0 193 292 133 232 2.10e-18 82.8
MsG0880042164.01.T01 AT5G60750 32.990 97 65 0 188 284 243 339 1.04e-11 65.1

Find 62 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACAGATTACTTGGCTTTA+AGG 0.139149 8:-4701272 MsG0880042164.01.T01:intron
CTGCATTGTCACTCCTCTTT+TGG 0.166860 8:-4697747 MsG0880042164.01.T01:CDS
TTCCCGTAACACTGAGTAAA+AGG 0.216225 8:+4702800 None:intergenic
ATTTGGGTTTATTGCTCTTC+TGG 0.227639 8:-4701317 MsG0880042164.01.T01:CDS
TTGTCATCAGCTCTGGGATT+TGG 0.232068 8:-4701334 MsG0880042164.01.T01:CDS
CTTCATATCCCTCTCAGTTT+TGG 0.250022 8:-4702717 MsG0880042164.01.T01:CDS
TGTCATCAGCTCTGGGATTT+GGG 0.270923 8:-4701333 MsG0880042164.01.T01:CDS
TCCTTGGATGCTCCTATTGC+TGG 0.317162 8:-4697580 MsG0880042164.01.T01:CDS
CTACTTGCTGACAGATTACT+TGG 0.328616 8:-4701280 MsG0880042164.01.T01:CDS
AATTTCCCACTCAACTTGAT+AGG 0.351762 8:-4702920 MsG0880042164.01.T01:CDS
TTTGTACAACTGTTCATCAT+TGG 0.365425 8:-4697608 MsG0880042164.01.T01:CDS
TACAGCTTGTTGCCACTTCA+TGG 0.373289 8:+4697679 None:intergenic
GTGGGAAATTTAACATAAAC+AGG 0.374096 8:+4702933 None:intergenic
CAAATTTCCAGTCCAGCAAT+AGG 0.384377 8:+4697568 None:intergenic
TTCATCATTGGGTGTGTCCT+TGG 0.388968 8:-4697596 MsG0880042164.01.T01:CDS
AATTATTGAGTGACAGGAAC+TGG 0.389545 8:-4701360 MsG0880042164.01.T01:CDS
ATATATGTCATGTCAGTAAC+GGG 0.400593 8:-4702966 None:intergenic
CTCTTGAGATATCACTGTTT+AGG 0.403202 8:+4697789 None:intergenic
TTGGAAGAAGTTGTTTATAG+AGG 0.413244 8:-4697728 MsG0880042164.01.T01:CDS
TTGAATGGTAAGAAGAGATA+TGG 0.430408 8:+4701465 None:intergenic
TTGTACAACTGTTCATCATT+GGG 0.432716 8:-4697607 MsG0880042164.01.T01:CDS
TTACTCAGTGTTACGGGAAG+AGG 0.442324 8:-4702796 MsG0880042164.01.T01:CDS
TCTTGAGTTTAATGCGGCTC+TGG 0.446196 8:-4701440 MsG0880042164.01.T01:CDS
AAAATAAATTATTGAGTGAC+AGG 0.453429 8:-4701366 MsG0880042164.01.T01:CDS
AAACTTGAAAATTTATATTG+TGG 0.465118 8:+4701394 None:intergenic
CCAAGAGGTGCCATTGCAAA+AGG 0.465524 8:-4702839 MsG0880042164.01.T01:CDS
GAAAAGATAAAGAACAAGAT+TGG 0.486664 8:+4702743 None:intergenic
GGATGCTCCTATTGCTGGAC+TGG 0.488522 8:-4697575 MsG0880042164.01.T01:CDS
ATTAAACTCAAGAACTTGAA+TGG 0.494812 8:+4701450 None:intergenic
CATGGCAGAGTGGTGATGTA+TGG 0.496794 8:-4702767 MsG0880042164.01.T01:CDS
TAAACAACTTCTTCCAAAAG+AGG 0.497470 8:+4697734 None:intergenic
AGGAGGATCTCCTTCAATGT+TGG 0.499718 8:+4697809 None:intergenic
TCCCACTCAACTTGATAGGT+TGG 0.507603 8:-4702916 MsG0880042164.01.T01:CDS
GGTGACGTTACCTGAGTTTG+TGG 0.512052 8:+4702645 None:intergenic
TCCCGTAACACTGAGTAAAA+GGG 0.518710 8:+4702801 None:intergenic
TCCGTCGTTGCGTTCCTCAC+AGG 0.521165 8:-4702687 MsG0880042164.01.T01:CDS
TTGAGATATCACTGTTTAGG+AGG 0.536495 8:+4697792 None:intergenic
TTGTTGCCACTTCATGGTGG+AGG 0.558411 8:+4697685 None:intergenic
CAAATAGAAACTCGAAATTG+AGG 0.559048 8:-4702863 MsG0880042164.01.T01:CDS
CATATATGTCATGTCAGTAA+CGG 0.559970 8:-4702967 None:intergenic
TCCAGCAATAGGAGCATCCA+AGG 0.564400 8:+4697579 None:intergenic
TGTTAGCAATCCAACATTGA+AGG 0.566242 8:-4697819 MsG0880042164.01.T01:CDS
CACTTTCCTCCACCATGAAG+TGG 0.568923 8:-4697691 MsG0880042164.01.T01:CDS
TCTTCTTCACCCACAAACTC+AGG 0.573899 8:-4702655 MsG0880042164.01.T01:intron
ACCAACCTATCAAGTTGAGT+GGG 0.585589 8:+4702915 None:intergenic
TTTATATTGTGGTTTAGCCG+TGG 0.588482 8:+4701405 None:intergenic
CATACATCACCACTCTGCCA+TGG 0.603331 8:+4702768 None:intergenic
AGCTTGTTGCCACTTCATGG+TGG 0.613499 8:+4697682 None:intergenic
GAGAATCCACCAAAACTGAG+AGG 0.615353 8:+4702708 None:intergenic
TCCTGTGAGGAACGCAACGA+CGG 0.619915 8:+4702686 None:intergenic
TGAGTTTGTGGGTGAAGAAG+AGG 0.620343 8:+4702657 None:intergenic
GTGACGTTACCTGAGTTTGT+GGG 0.621704 8:+4702646 None:intergenic
TACCAACCTATCAAGTTGAG+TGG 0.636822 8:+4702914 None:intergenic
TCAAGTTCTTGAGTTTAATG+CGG 0.637510 8:-4701446 MsG0880042164.01.T01:CDS
TCTGGTTGTATTGAAGTCCA+CGG 0.651123 8:-4701422 MsG0880042164.01.T01:CDS
AGAATCCACCAAAACTGAGA+GGG 0.651965 8:+4702709 None:intergenic
TACGGGAAGAGGATAGTCCA+TGG 0.659102 8:-4702785 MsG0880042164.01.T01:CDS
ACTCGAAATTGAGGTCCAAG+AGG 0.683963 8:-4702854 MsG0880042164.01.T01:CDS
GAGGATAGTCCATGGCAGAG+TGG 0.688866 8:-4702777 MsG0880042164.01.T01:CDS
ATGTCATGTCAGTAACGGGG+TGG 0.692719 8:-4702962 None:intergenic
GAAGAGGTTGCTGTCCTGTG+AGG 0.743551 8:+4702673 None:intergenic
TATATGTCATGTCAGTAACG+GGG 0.767785 8:-4702965 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATTTATTTCAC+AGG + Chr8:4697955-4697974 None:intergenic 10.0%
!! AAATAAATATTAATTCCATA+AGG + Chr8:4698621-4698640 None:intergenic 10.0%
!! AGAATTAAAAAAATAAATGA+AGG - Chr8:4701426-4701445 MsG0880042164.01.T01:CDS 10.0%
!! ATAAAAAAAAAATATTTCAC+AGG + Chr8:4697926-4697945 None:intergenic 10.0%
!! ATAAAATTACTAACAAAATA+AGG + Chr8:4697852-4697871 None:intergenic 10.0%
!! GAATTAAAAAAATAAATGAA+GGG - Chr8:4701427-4701446 MsG0880042164.01.T01:CDS 10.0%
!! TAAAAAAAAAAAATTTACAG+GGG - Chr8:4698094-4698113 MsG0880042164.01.T01:intron 10.0%
!! TTAAATAAATCTATATGAAA+AGG + Chr8:4698556-4698575 None:intergenic 10.0%
!!! TAACAAATTTTATTTGTAAT+TGG - Chr8:4698588-4698607 MsG0880042164.01.T01:intron 10.0%
!! AAAAAAAAAAAATTTACAGG+GGG - Chr8:4698095-4698114 MsG0880042164.01.T01:intron 15.0%
!! AAACTTGAAAATTTATATTG+TGG + Chr8:4699068-4699087 None:intergenic 15.0%
!! AAATTTCTATAAGTGATAAT+CGG + Chr8:4699296-4699315 None:intergenic 15.0%
!! TATGTTAAATAATCTTCTAA+AGG + Chr8:4698685-4698704 None:intergenic 15.0%
!! TATTTAAATTACAAAGAGTT+TGG + Chr8:4698282-4698301 None:intergenic 15.0%
!! TTTAACAAATGTTAACTTTA+GGG - Chr8:4699546-4699565 MsG0880042164.01.T01:intron 15.0%
!!! AAATAAAGTATCATTTCAAA+TGG + Chr8:4698533-4698552 None:intergenic 15.0%
!!! AGGAATTTTTTTGTTTTATT+AGG + Chr8:4702440-4702459 None:intergenic 15.0%
!!! TAAAGTTAACATTTGTTAAA+GGG + Chr8:4699546-4699565 None:intergenic 15.0%
!!! TAGTAATTTTATAGCATTAA+TGG - Chr8:4697860-4697879 MsG0880042164.01.T01:intron 15.0%
!! AAAAAAAAATATTTCACAGG+AGG + Chr8:4697923-4697942 None:intergenic 20.0%
!! AAAAAAAACACAAAATTCGA+TGG + Chr8:4702580-4702599 None:intergenic 20.0%
!! AAAAAAATTTATTTCACAGG+AGG + Chr8:4697952-4697971 None:intergenic 20.0%
!! AAAATAAATTATTGAGTGAC+AGG - Chr8:4699093-4699112 MsG0880042164.01.T01:intron 20.0%
!! AAAATAAGGATAAAGGATAA+AGG + Chr8:4697838-4697857 None:intergenic 20.0%
!! AAACGAGTAAATAATCATTT+GGG + Chr8:4698349-4698368 None:intergenic 20.0%
!! AAATAGATGTAAATATAGTG+AGG - Chr8:4699353-4699372 MsG0880042164.01.T01:intron 20.0%
!! ATAAAAATAGGTCATGAATA+AGG + Chr8:4702957-4702976 None:intergenic 20.0%
!! ATGATCACTAAACTATTATT+AGG - Chr8:4701954-4701973 MsG0880042164.01.T01:intron 20.0%
!! ATGGTAAAAGTTACATTAAA+GGG + Chr8:4702603-4702622 None:intergenic 20.0%
!! CTTGTTTCATTAAGAAAATA+AGG + Chr8:4702018-4702037 None:intergenic 20.0%
!! CTTTAACAAATGTTAACTTT+AGG - Chr8:4699545-4699564 MsG0880042164.01.T01:intron 20.0%
!! TAAACGAGTAAATAATCATT+TGG + Chr8:4698350-4698369 None:intergenic 20.0%
!! TACTAACAAAATAAGGATAA+AGG + Chr8:4697845-4697864 None:intergenic 20.0%
!! TATGGTAAAAGTTACATTAA+AGG + Chr8:4702604-4702623 None:intergenic 20.0%
!! TCACTATATTTACATCTATT+TGG + Chr8:4699354-4699373 None:intergenic 20.0%
!! TGAAAAAAAAAATTACAAGG+TGG - Chr8:4698067-4698086 MsG0880042164.01.T01:intron 20.0%
!! TGAAAATGACATATATTACA+GGG + Chr8:4697894-4697913 None:intergenic 20.0%
!!! AATAAAAACTCCTTTTTGTA+TGG + Chr8:4698000-4698019 None:intergenic 20.0%
!!! AGTTTCTATTTGTGTTTTTT+TGG + Chr8:4697588-4697607 None:intergenic 20.0%
!!! CAAAAATTTTGGTTTTTGTA+TGG - Chr8:4698028-4698047 MsG0880042164.01.T01:intron 20.0%
!!! CAATTTGGTGTATAAAATTA+GGG + Chr8:4698166-4698185 None:intergenic 20.0%
!!! CTAAAGTTAACATTTGTTAA+AGG + Chr8:4699547-4699566 None:intergenic 20.0%
!!! CTACACAAGAATTTTTATTT+TGG + Chr8:4699399-4699418 None:intergenic 20.0%
!!! CTCTGAAAAAAAAAATTACA+AGG - Chr8:4698064-4698083 MsG0880042164.01.T01:intron 20.0%
!!! GAATTTTTATTTTGGTCTAA+AGG + Chr8:4699391-4699410 None:intergenic 20.0%
!!! TCAATTTGGTGTATAAAATT+AGG + Chr8:4698167-4698186 None:intergenic 20.0%
!!! TGTTAAGATATTTTAACACA+TGG - Chr8:4698947-4698966 MsG0880042164.01.T01:intron 20.0%
! ATCACCATATTAATTCCATA+AGG + Chr8:4698659-4698678 None:intergenic 25.0%
! ATTAAACTCAAGAACTTGAA+TGG + Chr8:4699012-4699031 None:intergenic 25.0%
! ATTGCAGATTCATATAACTA+TGG - Chr8:4700924-4700943 MsG0880042164.01.T01:intron 25.0%
! CTGAAAATGACATATATTAC+AGG + Chr8:4697895-4697914 None:intergenic 25.0%
! GAAAAGATAAAGAACAAGAT+TGG + Chr8:4697719-4697738 None:intergenic 25.0%
! GTATCCTTATGGAATTAATA+TGG - Chr8:4698614-4698633 MsG0880042164.01.T01:intron 25.0%
! TAACAACACTAGTAATAGAT+TGG - Chr8:4701788-4701807 MsG0880042164.01.T01:intron 25.0%
! TAATTTAAATACGTTCGACA+AGG - Chr8:4698291-4698310 MsG0880042164.01.T01:intron 25.0%
! TCTTATGTTGCAAATATAAC+AGG - Chr8:4698766-4698785 MsG0880042164.01.T01:intron 25.0%
! TCTTTACAATTCAAAGTCAA+AGG - Chr8:4701617-4701636 MsG0880042164.01.T01:intron 25.0%
! TGGTGTATTAACAAAATTTC+AGG + Chr8:4702463-4702482 None:intergenic 25.0%
! TGTATTAACAAAATTTCAGG+AGG + Chr8:4702460-4702479 None:intergenic 25.0%
!! AGAGGTTTTTGAACATAAAT+AGG - Chr8:4700535-4700554 MsG0880042164.01.T01:intron 25.0%
!! AGTTATTGTTGTTACAAAAG+CGG - Chr8:4701401-4701420 MsG0880042164.01.T01:CDS 25.0%
!! CTTATAGAAATTTTGCTACT+AGG - Chr8:4699303-4699322 MsG0880042164.01.T01:intron 25.0%
!! GAATTGGAAGTTTCATTTTA+AGG - Chr8:4698825-4698844 MsG0880042164.01.T01:intron 25.0%
!! TCAATGATTTGGAAAATGAA+AGG - Chr8:4701287-4701306 MsG0880042164.01.T01:CDS 25.0%
!!! ATAGATTACCTTTTGTTGTA+AGG - Chr8:4701983-4702002 MsG0880042164.01.T01:intron 25.0%
!!! CTGTAATATATGTCATTTTC+AGG - Chr8:4697893-4697912 MsG0880042164.01.T01:intron 25.0%
!!! CTTTCATTTTCTGAAATGAA+AGG - Chr8:4698861-4698880 MsG0880042164.01.T01:intron 25.0%
!!! GTTTTCTAAGAAAAATGTCA+TGG + Chr8:4700819-4700838 None:intergenic 25.0%
!!! TTTTCAGGTTATGATTTCTA+TGG + Chr8:4701147-4701166 None:intergenic 25.0%
AAAGTCAAAACAACGTGAAA+AGG + Chr8:4698927-4698946 None:intergenic 30.0%
AACAAACAACATGAGAGAAA+TGG - Chr8:4698239-4698258 MsG0880042164.01.T01:intron 30.0%
AATGATTCAGAACTTTGACA+AGG + Chr8:4701656-4701675 None:intergenic 30.0%
AATTACAAAGAGTTTGGACT+TGG + Chr8:4698276-4698295 None:intergenic 30.0%
ACCTAATAGACCATACAAAA+AGG - Chr8:4697987-4698006 MsG0880042164.01.T01:intron 30.0%
ACTCTAACAAAATAGGAAAG+AGG - Chr8:4701355-4701374 MsG0880042164.01.T01:CDS 30.0%
ATACATAGTGAATTGAGACT+GGG - Chr8:4700039-4700058 MsG0880042164.01.T01:intron 30.0%
ATGATTTCTAACGATATACG+AGG - Chr8:4699838-4699857 MsG0880042164.01.T01:intron 30.0%
CAAATAGAAACTCGAAATTG+AGG - Chr8:4697596-4697615 MsG0880042164.01.T01:CDS 30.0%
GAAAATAGTTCTTCCAAATC+TGG - Chr8:4698404-4698423 MsG0880042164.01.T01:intron 30.0%
GAACATAAATAGGCTCAAAT+TGG - Chr8:4700545-4700564 MsG0880042164.01.T01:intron 30.0%
GTATAACTACTCTAATACAC+TGG - Chr8:4701458-4701477 MsG0880042164.01.T01:CDS 30.0%
GTGGGAAATTTAACATAAAC+AGG + Chr8:4697529-4697548 None:intergenic 30.0%
GTTGAGAAAATGGTATTTGA+TGG - Chr8:4700152-4700171 MsG0880042164.01.T01:intron 30.0%
TAAACAACTTCTTCCAAAAG+AGG + Chr8:4702728-4702747 None:intergenic 30.0%
TAAATTTGTGCAGTTCTGTA+AGG - Chr8:4698800-4698819 MsG0880042164.01.T01:intron 30.0%
TAGTCAAAGTAGAAGAAAGA+TGG - Chr8:4701590-4701609 MsG0880042164.01.T01:intron 30.0%
TATACATAGTGAATTGAGAC+TGG - Chr8:4700038-4700057 MsG0880042164.01.T01:intron 30.0%
TCAAGTTCTTGAGTTTAATG+CGG - Chr8:4699013-4699032 MsG0880042164.01.T01:intron 30.0%
TCTTTGTAAGAAAGATTCCT+TGG - Chr8:4699993-4700012 MsG0880042164.01.T01:intron 30.0%
TGCTGTGATAAAGAATGATA+TGG - Chr8:4701561-4701580 MsG0880042164.01.T01:intron 30.0%
TGTATTAGAGTAGTTATACC+TGG + Chr8:4701457-4701476 None:intergenic 30.0%
TGTGACAACTCTAACAAAAT+AGG - Chr8:4701348-4701367 MsG0880042164.01.T01:CDS 30.0%
TTATGTTCAAAAACCTCTCT+AGG + Chr8:4700533-4700552 None:intergenic 30.0%
TTGAATGGTAAGAAGAGATA+TGG + Chr8:4698997-4699016 None:intergenic 30.0%
TTGGAAGAAGTTGTTTATAG+AGG - Chr8:4702731-4702750 MsG0880042164.01.T01:CDS 30.0%
TTGTACAACTGTTCATCATT+GGG - Chr8:4702852-4702871 MsG0880042164.01.T01:CDS 30.0%
TTTGTACAACTGTTCATCAT+TGG - Chr8:4702851-4702870 MsG0880042164.01.T01:CDS 30.0%
! ATTATTTAGGGAGTATGTGA+AGG + Chr8:4702368-4702387 None:intergenic 30.0%
! TAGTGTTGTTAAATGTGCTT+TGG + Chr8:4701779-4701798 None:intergenic 30.0%
! TCCTTTTTGTATGGTCTATT+AGG + Chr8:4697991-4698010 None:intergenic 30.0%
! TTTTATACAACACGCTTCTA+AGG - Chr8:4698887-4698906 MsG0880042164.01.T01:intron 30.0%
! TTTTGTATGGTCTATTAGGT+GGG + Chr8:4697987-4698006 None:intergenic 30.0%
! TTTTTGTATGGTCTATTAGG+TGG + Chr8:4697988-4698007 None:intergenic 30.0%
!! ATCTTTTGTGTTGGTCAATT+TGG + Chr8:4698181-4698200 None:intergenic 30.0%
!! CAAAGTTCTGAATCATTCAT+GGG - Chr8:4701659-4701678 MsG0880042164.01.T01:intron 30.0%
!! GTAATTGGTTTGTATCCTTA+TGG - Chr8:4698603-4698622 MsG0880042164.01.T01:intron 30.0%
!! TCAAAGTTCTGAATCATTCA+TGG - Chr8:4701658-4701677 MsG0880042164.01.T01:intron 30.0%
!! TTTTTCAGAGTACCTCTAAT+AGG + Chr8:4698054-4698073 None:intergenic 30.0%
AAATAAATGAAGGGATTGCC+AGG - Chr8:4701436-4701455 MsG0880042164.01.T01:CDS 35.0%
AAATTTACAGGGGGTAAACT+TGG - Chr8:4698104-4698123 MsG0880042164.01.T01:intron 35.0%
AACAACATGAGAGAAATGGT+TGG - Chr8:4698243-4698262 MsG0880042164.01.T01:intron 35.0%
AACACACCCTTAAGGATTTA+TGG - Chr8:4699791-4699810 MsG0880042164.01.T01:intron 35.0%
AAGACTGCTTACAATAGATG+TGG + Chr8:4698750-4698769 None:intergenic 35.0%
AATTATTGAGTGACAGGAAC+TGG - Chr8:4699099-4699118 MsG0880042164.01.T01:intron 35.0%
AATTGCATGTAAACCAACCA+AGG + Chr8:4700013-4700032 None:intergenic 35.0%
AATTTCCCACTCAACTTGAT+AGG - Chr8:4697539-4697558 MsG0880042164.01.T01:CDS 35.0%
ACAAAGCTCTTAGTTGTGAT+AGG - Chr8:4699936-4699955 MsG0880042164.01.T01:intron 35.0%
ACACCTTAAGTGGGAATAAA+TGG - Chr8:4698452-4698471 MsG0880042164.01.T01:intron 35.0%
ACCATTCTACCAAGAAAGTT+CGG + Chr8:4699507-4699526 None:intergenic 35.0%
ACTGAAAGCTCTCAATGATT+TGG - Chr8:4701276-4701295 MsG0880042164.01.T01:CDS 35.0%
AGAATGGTACATCAGTTCAT+AGG - Chr8:4699519-4699538 MsG0880042164.01.T01:intron 35.0%
AGCATTATAAGTTTCATCCC+TGG - Chr8:4702407-4702426 MsG0880042164.01.T01:intron 35.0%
ATAACTGAAGCAAACTGTTG+TGG - Chr8:4700405-4700424 MsG0880042164.01.T01:intron 35.0%
ATAAGTTTCATCCCTGGATA+CGG - Chr8:4702413-4702432 MsG0880042164.01.T01:intron 35.0%
ATCATTTGGGTCCATGAATA+TGG + Chr8:4698336-4698355 None:intergenic 35.0%
ATGTGGTGACAACATAACAT+AGG - Chr8:4700317-4700336 MsG0880042164.01.T01:intron 35.0%
ATGTTGCAAATATAACAGGC+TGG - Chr8:4698770-4698789 MsG0880042164.01.T01:intron 35.0%
ATTGAGACAGATATGAACCA+GGG - Chr8:4700494-4700513 MsG0880042164.01.T01:intron 35.0%
CAATTCAAATGAGGTCATGA+TGG + Chr8:4700655-4700674 None:intergenic 35.0%
CACACTCCATAAATCCTTAA+GGG + Chr8:4699800-4699819 None:intergenic 35.0%
CACCTTAAGTGGGAATAAAT+GGG - Chr8:4698453-4698472 MsG0880042164.01.T01:intron 35.0%
CAGTCATACATGTTTGGTAA+AGG - Chr8:4702106-4702125 MsG0880042164.01.T01:intron 35.0%
CATACTCAGTCATACATGTT+TGG - Chr8:4702100-4702119 MsG0880042164.01.T01:intron 35.0%
CATCATGACCTCATTTGAAT+TGG - Chr8:4700653-4700672 MsG0880042164.01.T01:intron 35.0%
CATTTGAATGCGATCTTTGA+AGG + Chr8:4700954-4700973 None:intergenic 35.0%
CTATAATTGCCGAACTTTCT+TGG - Chr8:4699495-4699514 MsG0880042164.01.T01:intron 35.0%
CTCTTGAGATATCACTGTTT+AGG + Chr8:4702673-4702692 None:intergenic 35.0%
CTTAAGGATTTATGGAGTGT+GGG - Chr8:4699799-4699818 MsG0880042164.01.T01:intron 35.0%
GAAATGGCCTATATTACAAG+GGG - Chr8:4698126-4698145 MsG0880042164.01.T01:intron 35.0%
GGAAATGGCCTATATTACAA+GGG - Chr8:4698125-4698144 MsG0880042164.01.T01:intron 35.0%
GGAAGACAAAAGGTTTAAGT+TGG - Chr8:4699859-4699878 MsG0880042164.01.T01:intron 35.0%
GGGAATAAATGGGAAATATG+AGG - Chr8:4698463-4698482 MsG0880042164.01.T01:intron 35.0%
GTGTATGACAGTTGAGAAAA+TGG - Chr8:4700142-4700161 MsG0880042164.01.T01:intron 35.0%
TAAACACCAGATACCATGTT+GGG - Chr8:4701239-4701258 MsG0880042164.01.T01:intron 35.0%
TAATACACTGGCATGCAATT+AGG - Chr8:4701470-4701489 MsG0880042164.01.T01:intron 35.0%
TCAAATGGTTAGTAATCGCA+AGG + Chr8:4698518-4698537 None:intergenic 35.0%
TCGATTTACGTGTGTATGTT+TGG - Chr8:4700227-4700246 MsG0880042164.01.T01:intron 35.0%
TCTTTACCTTTCCAAGTCAA+GGG - Chr8:4700179-4700198 MsG0880042164.01.T01:intron 35.0%
TGGAAATGGCCTATATTACA+AGG - Chr8:4698124-4698143 MsG0880042164.01.T01:intron 35.0%
TGTAAGAAAGATTCCTTGGT+TGG - Chr8:4699997-4700016 MsG0880042164.01.T01:intron 35.0%
TGTGTTTGGATTGAGGATTT+AGG - Chr8:4699569-4699588 MsG0880042164.01.T01:intron 35.0%
TGTTAGCAATCCAACATTGA+AGG - Chr8:4702640-4702659 MsG0880042164.01.T01:intron 35.0%
TGTTCTACCCCTTGTAATAT+AGG + Chr8:4698136-4698155 None:intergenic 35.0%
TTATGCATCTTCACTTACGT+TGG - Chr8:4701088-4701107 MsG0880042164.01.T01:intron 35.0%
TTCCCATTTATTCCCACTTA+AGG + Chr8:4698458-4698477 None:intergenic 35.0%
TTCTACAGAAGTCATTCCTA+AGG - Chr8:4701209-4701228 MsG0880042164.01.T01:intron 35.0%
TTCTCTCATTAGTTGCTAGT+TGG + Chr8:4700904-4700923 None:intergenic 35.0%
TTCTTTACCTTTCCAAGTCA+AGG - Chr8:4700178-4700197 MsG0880042164.01.T01:intron 35.0%
TTGAAGAAGAATGTTCAGAC+TGG - Chr8:4700113-4700132 MsG0880042164.01.T01:intron 35.0%
TTGAGATATCACTGTTTAGG+AGG + Chr8:4702670-4702689 None:intergenic 35.0%
TTTATATTGTGGTTTAGCCG+TGG + Chr8:4699057-4699076 None:intergenic 35.0%
TTTGGATTGAGGATTTAGGA+GGG - Chr8:4699573-4699592 MsG0880042164.01.T01:intron 35.0%
! ATCATAACCTGAAAAGTGTG+TGG - Chr8:4701152-4701171 MsG0880042164.01.T01:intron 35.0%
! ATTTGGGTTTATTGCTCTTC+TGG - Chr8:4699142-4699161 MsG0880042164.01.T01:intron 35.0%
! CTGAAATGCATCTTTTGTGT+TGG + Chr8:4698190-4698209 None:intergenic 35.0%
! CTTGTTCTTTCCTTTTGCAA+TGG + Chr8:4697633-4697652 None:intergenic 35.0%
! GTCTCTTTTGCTAATCAGTT+TGG + Chr8:4698214-4698233 None:intergenic 35.0%
! GTTTTTGTATGGCCTATTAG+AGG - Chr8:4698039-4698058 MsG0880042164.01.T01:intron 35.0%
! TAAATCCTTAAGGGTGTGTT+TGG + Chr8:4699791-4699810 None:intergenic 35.0%
! TCTTTTCCATTCACAAATGC+AGG - Chr8:4698971-4698990 MsG0880042164.01.T01:intron 35.0%
! TTTTATTAGGACCGTATCCA+GGG + Chr8:4702427-4702446 None:intergenic 35.0%
!! CAAAAGGTTTAAGTTGGATG+TGG - Chr8:4699865-4699884 MsG0880042164.01.T01:intron 35.0%
!! GAGTAAGAAAGATTAGCTTG+AGG - Chr8:4700717-4700736 MsG0880042164.01.T01:intron 35.0%
!! TGACAGATTACTTGGCTTTA+AGG - Chr8:4699187-4699206 MsG0880042164.01.T01:intron 35.0%
!! TGGTGTTTAGTTTGATCCTT+AGG + Chr8:4701228-4701247 None:intergenic 35.0%
!! TGTTAACTTTAGGGTGTGTT+TGG - Chr8:4699555-4699574 MsG0880042164.01.T01:intron 35.0%
!!! AACCTGGTTTTGAATGAACA+AGG - Chr8:4700264-4700283 MsG0880042164.01.T01:intron 35.0%
!!! ACCTGGTTTTGAATGAACAA+GGG - Chr8:4700265-4700284 MsG0880042164.01.T01:intron 35.0%
!!! CTACTAGGTGTTTTAGAAGT+GGG - Chr8:4699318-4699337 MsG0880042164.01.T01:intron 35.0%
AAAGAGTCGAAGCTTCTTCA+AGG - Chr8:4701739-4701758 MsG0880042164.01.T01:intron 40.0%
AACATAACATAGGCATGAGG+TGG - Chr8:4700327-4700346 MsG0880042164.01.T01:intron 40.0%
AAGAGTCGAAGCTTCTTCAA+GGG - Chr8:4701740-4701759 MsG0880042164.01.T01:intron 40.0%
AATAACTACACACAGTCACG+AGG + Chr8:4702491-4702510 None:intergenic 40.0%
AATGTGCTTTGGTAAAGCCT+AGG + Chr8:4701768-4701787 None:intergenic 40.0%
AGAAGAACAGCTTATCAGTC+TGG - Chr8:4699417-4699436 MsG0880042164.01.T01:intron 40.0%
AGAATCCACCAAAACTGAGA+GGG + Chr8:4697753-4697772 None:intergenic 40.0%
AGATACCATGTTGGGATATC+TGG - Chr8:4701247-4701266 MsG0880042164.01.T01:intron 40.0%
AGATATCCCAACATGGTATC+TGG + Chr8:4701248-4701267 None:intergenic 40.0%
AGGAAAGAGGAACTAACTGA+AGG - Chr8:4701368-4701387 MsG0880042164.01.T01:CDS 40.0%
ATAGACTCACACACCTTAAG+TGG - Chr8:4698442-4698461 MsG0880042164.01.T01:intron 40.0%
ATAGATGTGGACCTTAGTTC+TGG + Chr8:4698737-4698756 None:intergenic 40.0%
ATATGGCCTGCATTTGTGAA+TGG + Chr8:4698980-4698999 None:intergenic 40.0%
ATGAGAGTGAGAGTTTGTGA+AGG + Chr8:4702342-4702361 None:intergenic 40.0%
ATGTGCTTTGGTAAAGCCTA+GGG + Chr8:4701767-4701786 None:intergenic 40.0%
CAAATTTCCAGTCCAGCAAT+AGG + Chr8:4702894-4702913 None:intergenic 40.0%
CATTGAGACAGATATGAACC+AGG - Chr8:4700493-4700512 MsG0880042164.01.T01:intron 40.0%
CCACACTCCATAAATCCTTA+AGG + Chr8:4699801-4699820 None:intergenic 40.0%
CCTAGTAGCCACTAAAAACA+TGG - Chr8:4701704-4701723 MsG0880042164.01.T01:intron 40.0%
CCTTAAGGATTTATGGAGTG+TGG - Chr8:4699798-4699817 MsG0880042164.01.T01:intron 40.0%
CGATATACGAGGAAGACAAA+AGG - Chr8:4699849-4699868 MsG0880042164.01.T01:intron 40.0%
CGCATTCAAATGCTCTTTCA+TGG - Chr8:4700962-4700981 MsG0880042164.01.T01:intron 40.0%
CGTGACTGTGTGTAGTTATT+CGG - Chr8:4702491-4702510 MsG0880042164.01.T01:intron 40.0%
CTAAACACCAGATACCATGT+TGG - Chr8:4701238-4701257 MsG0880042164.01.T01:intron 40.0%
CTGGTTCATATCTGTCTCAA+TGG + Chr8:4700495-4700514 None:intergenic 40.0%
CTTAGTTGTGATAGGCTAAG+AGG - Chr8:4699944-4699963 MsG0880042164.01.T01:intron 40.0%
GAAGAACAGCTTATCAGTCT+GGG - Chr8:4699418-4699437 MsG0880042164.01.T01:intron 40.0%
GAAGGATCATGAGAGTTTGT+CGG + Chr8:4702324-4702343 None:intergenic 40.0%
GACAACATAACATAGGCATG+AGG - Chr8:4700324-4700343 MsG0880042164.01.T01:intron 40.0%
GAGTTTCTTCTTTGGATCCA+AGG + Chr8:4701025-4701044 None:intergenic 40.0%
GATCCAAAGAAGAAACTCAG+AGG - Chr8:4701027-4701046 MsG0880042164.01.T01:intron 40.0%
GCAGTTCTGTAAGGTTGAAT+TGG - Chr8:4698809-4698828 MsG0880042164.01.T01:intron 40.0%
GGGGGTAAATACTTCTTTGA+TGG - Chr8:4699452-4699471 MsG0880042164.01.T01:intron 40.0%
GTATAAGTGAGAAAACCGTG+AGG - Chr8:4699887-4699906 MsG0880042164.01.T01:intron 40.0%
GTTCGGCAATTATAGCAATG+AGG + Chr8:4699490-4699509 None:intergenic 40.0%
GTTTGGATTGAGGATTTAGG+AGG - Chr8:4699572-4699591 MsG0880042164.01.T01:intron 40.0%
TAGACTCACACACCTTAAGT+GGG - Chr8:4698443-4698462 MsG0880042164.01.T01:intron 40.0%
TAGCAGCTCCTTACAACAAA+AGG + Chr8:4701994-4702013 None:intergenic 40.0%
TCAAAGTCAAAGGAAGCTCA+AGG - Chr8:4701627-4701646 MsG0880042164.01.T01:intron 40.0%
TCCCGTAACACTGAGTAAAA+GGG + Chr8:4697661-4697680 None:intergenic 40.0%
TCTGGTTGTATTGAAGTCCA+CGG - Chr8:4699037-4699056 MsG0880042164.01.T01:intron 40.0%
TGGATTCTCTCACGATAGAT+GGG + Chr8:4700884-4700903 None:intergenic 40.0%
TGTCAGGTTTGTAAAGAGTC+TGG + Chr8:4700595-4700614 None:intergenic 40.0%
TGTTACTCTACGTATCAGTC+TGG + Chr8:4700450-4700469 None:intergenic 40.0%
TTCCCGTAACACTGAGTAAA+AGG + Chr8:4697662-4697681 None:intergenic 40.0%
TTGAGACAGATATGAACCAG+GGG - Chr8:4700495-4700514 MsG0880042164.01.T01:intron 40.0%
TTGGATTCTCTCACGATAGA+TGG + Chr8:4700885-4700904 None:intergenic 40.0%
TTGGATTGAGGATTTAGGAG+GGG - Chr8:4699574-4699593 MsG0880042164.01.T01:intron 40.0%
TTTGGGTCCATGAATATGGA+AGG + Chr8:4698332-4698351 None:intergenic 40.0%
! ACATTTAGCTTCCCTTGACT+TGG + Chr8:4700193-4700212 None:intergenic 40.0%
! ACTAGGTAGGCTTTTAAGCA+AGG + Chr8:4701690-4701709 None:intergenic 40.0%
! AGGAGATCAGTGTAGTTTGT+AGG - Chr8:4699964-4699983 MsG0880042164.01.T01:intron 40.0%
! ATAACCTGAAAAGTGTGTGG+TGG - Chr8:4701155-4701174 MsG0880042164.01.T01:intron 40.0%
! CTACTTGCTGACAGATTACT+TGG - Chr8:4699179-4699198 MsG0880042164.01.T01:intron 40.0%
! CTCCCTTTTACTCAGTGTTA+CGG - Chr8:4697656-4697675 MsG0880042164.01.T01:CDS 40.0%
! CTTCATATCCCTCTCAGTTT+TGG - Chr8:4697742-4697761 MsG0880042164.01.T01:CDS 40.0%
! GGAGATCAGTGTAGTTTGTA+GGG - Chr8:4699965-4699984 MsG0880042164.01.T01:intron 40.0%
! TCCCTTTTACTCAGTGTTAC+GGG - Chr8:4697657-4697676 MsG0880042164.01.T01:CDS 40.0%
! TGGTTTTTGTCATCAGCTCT+GGG - Chr8:4699119-4699138 MsG0880042164.01.T01:intron 40.0%
! TTCTTCTTTTACCACTGCTC+TGG + Chr8:4701123-4701142 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG - Chr8:4699562-4699581 MsG0880042164.01.T01:intron 40.0%
!! ACCAACCTATCAAGTTGAGT+GGG + Chr8:4697547-4697566 None:intergenic 40.0%
!! ATACAACACGCTTCTAAGGT+AGG - Chr8:4698891-4698910 MsG0880042164.01.T01:intron 40.0%
!! CAAAGAAGTATTTACCCCCA+TGG + Chr8:4699451-4699470 None:intergenic 40.0%
!! GTTTTATTAGGACCGTATCC+AGG + Chr8:4702428-4702447 None:intergenic 40.0%
!! TACCAACCTATCAAGTTGAG+TGG + Chr8:4697548-4697567 None:intergenic 40.0%
!!! ACGGGAAACCATGTTTTTAG+TGG + Chr8:4701715-4701734 None:intergenic 40.0%
!!! CCATGTTTTTAGTGGCTACT+AGG + Chr8:4701707-4701726 None:intergenic 40.0%
!!! CCTGGTTTTGAATGAACAAG+GGG - Chr8:4700266-4700285 MsG0880042164.01.T01:intron 40.0%
!!! GCTACTAGGTGTTTTAGAAG+TGG - Chr8:4699317-4699336 MsG0880042164.01.T01:intron 40.0%
!!! GTTTTTAGTGGCTACTAGGT+AGG + Chr8:4701703-4701722 None:intergenic 40.0%
!!! TGTCGGACGTTAGTTTTCTT+AGG + Chr8:4702307-4702326 None:intergenic 40.0%
AAATCTGGTCAGTGGTCTAC+TGG - Chr8:4698419-4698438 MsG0880042164.01.T01:intron 45.0%
AACTCGATGCTTGTGCAGAA+AGG + Chr8:4701904-4701923 None:intergenic 45.0%
AAGCTTCGACTCTTTCGCTA+CGG + Chr8:4701734-4701753 None:intergenic 45.0%
AATCCTCTGCTGACATACTC+TGG + Chr8:4700687-4700706 None:intergenic 45.0%
ACAGGGGGTAAACTTGGAAA+TGG - Chr8:4698110-4698129 MsG0880042164.01.T01:intron 45.0%
ACTCGAAATTGAGGTCCAAG+AGG - Chr8:4697605-4697624 MsG0880042164.01.T01:CDS 45.0%
ACTGAAGCAAACTGTTGTGG+AGG - Chr8:4700408-4700427 MsG0880042164.01.T01:intron 45.0%
AGAGTAACATTTCTTCCCCG+AGG - Chr8:4700461-4700480 MsG0880042164.01.T01:intron 45.0%
AGGAGGATCTCCTTCAATGT+TGG + Chr8:4702653-4702672 None:intergenic 45.0%
AGTAACATTTCTTCCCCGAG+GGG - Chr8:4700463-4700482 MsG0880042164.01.T01:intron 45.0%
AGTAGACCACTGACCAGATT+TGG + Chr8:4698420-4698439 None:intergenic 45.0%
ATTGAGGATTTAGGAGGGGA+AGG - Chr8:4699578-4699597 MsG0880042164.01.T01:intron 45.0%
CACTAAAGCTGCAAGGTCAA+CGG - Chr8:4700617-4700636 MsG0880042164.01.T01:intron 45.0%
CAGTCTGCAGCAATGCAATA+TGG + Chr8:4702622-4702641 None:intergenic 45.0%
CATGAGAGAAATGGTTGGAG+TGG - Chr8:4698248-4698267 MsG0880042164.01.T01:intron 45.0%
CCCCTTGTTCATTCAAAACC+AGG + Chr8:4700269-4700288 None:intergenic 45.0%
GACGTCACCTTCCATATTCA+TGG - Chr8:4698322-4698341 MsG0880042164.01.T01:intron 45.0%
GAGAATCCACCAAAACTGAG+AGG + Chr8:4697754-4697773 None:intergenic 45.0%
GAGTAACATTTCTTCCCCGA+GGG - Chr8:4700462-4700481 MsG0880042164.01.T01:intron 45.0%
GCCGAACTTTCTTGGTAGAA+TGG - Chr8:4699503-4699522 MsG0880042164.01.T01:intron 45.0%
GGATGAGCATTTGTCAAACC+TGG - Chr8:4700248-4700267 MsG0880042164.01.T01:intron 45.0%
GGATTCTCTCACGATAGATG+GGG + Chr8:4700883-4700902 None:intergenic 45.0%
GTATGCTTCCTAGTGTTCAG+TGG - Chr8:4701538-4701557 MsG0880042164.01.T01:intron 45.0%
GTGACGTTACCTGAGTTTGT+GGG + Chr8:4697816-4697835 None:intergenic 45.0%
GTGCCTCTGAGTTTCTTCTT+TGG + Chr8:4701033-4701052 None:intergenic 45.0%
GTTCTTCCAAATCTGGTCAG+TGG - Chr8:4698411-4698430 MsG0880042164.01.T01:intron 45.0%
TCACTCCAGATATCCCAACA+TGG + Chr8:4701255-4701274 None:intergenic 45.0%
TCCATCCAAACACACCCTTA+AGG - Chr8:4699783-4699802 MsG0880042164.01.T01:intron 45.0%
TCCCACTCAACTTGATAGGT+TGG - Chr8:4697543-4697562 MsG0880042164.01.T01:CDS 45.0%
TCGCTAGCTGTAGCAGTATT+GGG + Chr8:4701847-4701866 None:intergenic 45.0%
TCTTCTTCACCCACAAACTC+AGG - Chr8:4697804-4697823 MsG0880042164.01.T01:CDS 45.0%
TCTTGAGTTTAATGCGGCTC+TGG - Chr8:4699019-4699038 MsG0880042164.01.T01:intron 45.0%
TGACACTCACTAAAGCTGCA+AGG - Chr8:4700610-4700629 MsG0880042164.01.T01:intron 45.0%
TGAGTTTGTGGGTGAAGAAG+AGG + Chr8:4697805-4697824 None:intergenic 45.0%
TGATCGGGCCAATTCAAATG+AGG + Chr8:4700664-4700683 None:intergenic 45.0%
TGCTGACATACTCTGGTGAT+CGG + Chr8:4700680-4700699 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + Chr8:4699777-4699796 None:intergenic 45.0%
TTACTCAGTGTTACGGGAAG+AGG - Chr8:4697663-4697682 MsG0880042164.01.T01:CDS 45.0%
TTCATCATTGGGTGTGTCCT+TGG - Chr8:4702863-4702882 MsG0880042164.01.T01:CDS 45.0%
TTCGCTAGCTGTAGCAGTAT+TGG + Chr8:4701848-4701867 None:intergenic 45.0%
TTGAGAGAGTCAACGAACCT+TGG - Chr8:4701005-4701024 MsG0880042164.01.T01:intron 45.0%
TTGAGGATTTAGGAGGGGAA+GGG - Chr8:4699579-4699598 MsG0880042164.01.T01:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + Chr8:4699773-4699792 None:intergenic 45.0%
! ACTATCTAGGATGGCATGCT+TGG - Chr8:4700068-4700087 MsG0880042164.01.T01:intron 45.0%
! CTGCATTGTCACTCCTCTTT+TGG - Chr8:4702712-4702731 MsG0880042164.01.T01:CDS 45.0%
! GTTGACTCTCTCAACATGGT+TGG + Chr8:4700999-4701018 None:intergenic 45.0%
! TAAGGGTGTGTTTGGATGGA+GGG + Chr8:4699783-4699802 None:intergenic 45.0%
! TCCTTAAGGGTGTGTTTGGA+TGG + Chr8:4699787-4699806 None:intergenic 45.0%
! TCTCAATGGTTTTCTCCCCT+CGG + Chr8:4700481-4700500 None:intergenic 45.0%
! TTAAGGGTGTGTTTGGATGG+AGG + Chr8:4699784-4699803 None:intergenic 45.0%
! TTGCAGCTTTAGTGAGTGTC+AGG + Chr8:4700611-4700630 None:intergenic 45.0%
!! CATATCCCTCTCAGTTTTGG+TGG - Chr8:4697745-4697764 MsG0880042164.01.T01:CDS 45.0%
!! CTGGTTTTTGTCATCAGCTC+TGG - Chr8:4699118-4699137 MsG0880042164.01.T01:intron 45.0%
!! GTTCGTTGACTCTCTCAACA+TGG + Chr8:4701003-4701022 None:intergenic 45.0%
!! TACAGCTTGTTGCCACTTCA+TGG + Chr8:4702783-4702802 None:intergenic 45.0%
!! TAGCTTCCCTTGACTTGGAA+AGG + Chr8:4700188-4700207 None:intergenic 45.0%
!! TGTCATCAGCTCTGGGATTT+GGG - Chr8:4699126-4699145 MsG0880042164.01.T01:intron 45.0%
!! TTGTCATCAGCTCTGGGATT+TGG - Chr8:4699125-4699144 MsG0880042164.01.T01:intron 45.0%
!! AATAAAAAAAAAAAATTTAC+AGG - Chr8:4698092-4698111 MsG0880042164.01.T01:intron 5.0%
!! AATAAAACAATATATTATTT+AGG + Chr8:4702381-4702400 None:intergenic 5.0%
!! AATTAATATTTATTTGTAAT+TGG - Chr8:4698626-4698645 MsG0880042164.01.T01:intron 5.0%
!! ATAAAAAAAAAAAATTTACA+GGG - Chr8:4698093-4698112 MsG0880042164.01.T01:intron 5.0%
!! ATAAAACAATATATTATTTA+GGG + Chr8:4702380-4702399 None:intergenic 5.0%
!!! ATTTTTTTTTACAAAAATTT+TGG - Chr8:4698017-4698036 MsG0880042164.01.T01:intron 5.0%
AAAACCGTGAGGTTGACTGG+CGG - Chr8:4699898-4699917 MsG0880042164.01.T01:intron 50.0%
AAGCTGTGGAACAGCCTGAA+AGG - Chr8:4700371-4700390 MsG0880042164.01.T01:intron 50.0%
AAGCTTCTTCAAGGGACCCT+AGG - Chr8:4701748-4701767 MsG0880042164.01.T01:intron 50.0%
ACTACACACAGTCACGAGGT+CGG + Chr8:4702487-4702506 None:intergenic 50.0%
AGATATGAACCAGGGGAAGG+AGG - Chr8:4700502-4700521 MsG0880042164.01.T01:intron 50.0%
AGCTGCTGCACTAGTCAAAG+TGG - Chr8:4701511-4701530 MsG0880042164.01.T01:intron 50.0%
AGCTTCGACTCTTTCGCTAC+GGG + Chr8:4701733-4701752 None:intergenic 50.0%
CACTTTCCTCCACCATGAAG+TGG - Chr8:4702768-4702787 MsG0880042164.01.T01:CDS 50.0%
CATACATCACCACTCTGCCA+TGG + Chr8:4697694-4697713 None:intergenic 50.0%
CATGCCAAGGTCCAGAACTA+AGG - Chr8:4698723-4698742 MsG0880042164.01.T01:intron 50.0%
CGCAAGGACACTAATACGCA+GGG + Chr8:4698502-4698521 None:intergenic 50.0%
CTGCACTAGTCAAAGTGGCA+TGG - Chr8:4701516-4701535 MsG0880042164.01.T01:intron 50.0%
GAAGCAAACTGTTGTGGAGG+TGG - Chr8:4700411-4700430 MsG0880042164.01.T01:intron 50.0%
GACAGATATGAACCAGGGGA+AGG - Chr8:4700499-4700518 MsG0880042164.01.T01:intron 50.0%
GACTGGGAGTTGCACTATCT+AGG - Chr8:4700055-4700074 MsG0880042164.01.T01:intron 50.0%
GAGAAAACCGTGAGGTTGAC+TGG - Chr8:4699895-4699914 MsG0880042164.01.T01:intron 50.0%
GCAAGGACACTAATACGCAG+GGG + Chr8:4698501-4698520 None:intergenic 50.0%
GCATGAGGTGGAGTTTGATG+CGG - Chr8:4700339-4700358 MsG0880042164.01.T01:intron 50.0%
GCTGACATACTCTGGTGATC+GGG + Chr8:4700679-4700698 None:intergenic 50.0%
GGAGAAGATTACCAGAGCAG+TGG - Chr8:4701109-4701128 MsG0880042164.01.T01:intron 50.0%
GGGAGTTGCACTATCTAGGA+TGG - Chr8:4700059-4700078 MsG0880042164.01.T01:intron 50.0%
GGTGACGTTACCTGAGTTTG+TGG + Chr8:4697817-4697836 None:intergenic 50.0%
GGTTGAGCTAGAGCATGATG+TGG - Chr8:4700300-4700319 MsG0880042164.01.T01:intron 50.0%
GTCTCTGTTACAGAGCTTGC+TGG - Chr8:4700750-4700769 MsG0880042164.01.T01:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + Chr8:4699774-4699793 None:intergenic 50.0%
TACGGGAAGAGGATAGTCCA+TGG - Chr8:4697674-4697693 MsG0880042164.01.T01:CDS 50.0%
TATGCCTTCACCAGCCTTTC+AGG + Chr8:4700388-4700407 None:intergenic 50.0%
TCACAGCACCACTGAACACT+AGG + Chr8:4701549-4701568 None:intergenic 50.0%
TCACCAGAGTATGTCAGCAG+AGG - Chr8:4700681-4700700 MsG0880042164.01.T01:intron 50.0%
TCCTTGGATGCTCCTATTGC+TGG - Chr8:4702879-4702898 MsG0880042164.01.T01:CDS 50.0%
TCGCAAGGACACTAATACGC+AGG + Chr8:4698503-4698522 None:intergenic 50.0%
TGAGGTCATGATGGCTGCTA+TGG + Chr8:4700646-4700665 None:intergenic 50.0%
TGTGGAGGTGGTTGAAACTG+TGG - Chr8:4700423-4700442 MsG0880042164.01.T01:intron 50.0%
TTACTATCCCAGCCATGCCA+AGG - Chr8:4698710-4698729 MsG0880042164.01.T01:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + Chr8:4699772-4699791 None:intergenic 50.0%
TTTGGTCTAAAGGCGAGAGC+AGG + Chr8:4699381-4699400 None:intergenic 50.0%
! AGTCTGGGATGCAAACCATG+GGG - Chr8:4699433-4699452 MsG0880042164.01.T01:intron 50.0%
! CAGTCTGGGATGCAAACCAT+GGG - Chr8:4699432-4699451 MsG0880042164.01.T01:intron 50.0%
! CATGGCAGAGTGGTGATGTA+TGG - Chr8:4697692-4697711 MsG0880042164.01.T01:CDS 50.0%
! CCTTTTGCAATGGCACCTCT+TGG + Chr8:4697623-4697642 None:intergenic 50.0%
! CTCAATGGTTTTCTCCCCTC+GGG + Chr8:4700480-4700499 None:intergenic 50.0%
! TCAATGGTTTTCTCCCCTCG+GGG + Chr8:4700479-4700498 None:intergenic 50.0%
! TCAGTCTGGGATGCAAACCA+TGG - Chr8:4699431-4699450 MsG0880042164.01.T01:intron 50.0%
! TCGACCACCACACACTTTTC+AGG + Chr8:4701162-4701181 None:intergenic 50.0%
! TGAAAAGTGTGTGGTGGTCG+AGG - Chr8:4701161-4701180 MsG0880042164.01.T01:intron 50.0%
! TTGTTGCCACTTCATGGTGG+AGG + Chr8:4702777-4702796 None:intergenic 50.0%
!! AGCTTGTTGCCACTTCATGG+TGG + Chr8:4702780-4702799 None:intergenic 50.0%
!! CCAAGAGGTGCCATTGCAAA+AGG - Chr8:4697620-4697639 MsG0880042164.01.T01:CDS 50.0%
!! CTTAGTTCTGGACCTTGGCA+TGG + Chr8:4698725-4698744 None:intergenic 50.0%
!! TCCAGCAATAGGAGCATCCA+AGG + Chr8:4702883-4702902 None:intergenic 50.0%
!! TGGACCTTAGTTCTGGACCT+TGG + Chr8:4698730-4698749 None:intergenic 50.0%
AAAGTGTGTGGTGGTCGAGG+TGG - Chr8:4701164-4701183 MsG0880042164.01.T01:intron 55.0%
ACAGCCTGAAAGGCTGGTGA+AGG - Chr8:4700381-4700400 MsG0880042164.01.T01:intron 55.0%
AGGATTTAGGAGGGGAAGGG+AGG - Chr8:4699582-4699601 MsG0880042164.01.T01:intron 55.0%
ATGGAGGGTTTAGGAGGGGA+GGG + Chr8:4699768-4699787 None:intergenic 55.0%
CGAACTCTCTGGTGAAGTGC+AGG - Chr8:4700773-4700792 MsG0880042164.01.T01:intron 55.0%
GAACAAGGGGACGCAAGCAT+AGG - Chr8:4700279-4700298 MsG0880042164.01.T01:intron 55.0%
GAAGAGGTTGCTGTCCTGTG+AGG + Chr8:4697789-4697808 None:intergenic 55.0%
GACACTAATACGCAGGGGTC+GGG + Chr8:4698496-4698515 None:intergenic 55.0%
GAGGATAGTCCATGGCAGAG+TGG - Chr8:4697682-4697701 MsG0880042164.01.T01:CDS 55.0%
GATTTAGGAGGGGAAGGGAG+GGG - Chr8:4699584-4699603 MsG0880042164.01.T01:intron 55.0%
GGACACTAATACGCAGGGGT+CGG + Chr8:4698497-4698516 None:intergenic 55.0%
GGATGCTCCTATTGCTGGAC+TGG - Chr8:4702884-4702903 MsG0880042164.01.T01:CDS 55.0%
GGATTTAGGAGGGGAAGGGA+GGG - Chr8:4699583-4699602 MsG0880042164.01.T01:intron 55.0%
GGTCATGATGGCTGCTATGG+TGG + Chr8:4700643-4700662 None:intergenic 55.0%
GGTTGACTGGCGGAGGATAT+CGG - Chr8:4699908-4699927 MsG0880042164.01.T01:intron 55.0%
GTTGACTGGCGGAGGATATC+GGG - Chr8:4699909-4699928 MsG0880042164.01.T01:intron 55.0%
TATGAACCAGGGGAAGGAGG+TGG - Chr8:4700505-4700524 MsG0880042164.01.T01:intron 55.0%
TCCTGTGAGGAACGCAACGA+CGG + Chr8:4697776-4697795 None:intergenic 55.0%
TGAGGTGGAGTTTGATGCGG+TGG - Chr8:4700342-4700361 MsG0880042164.01.T01:intron 55.0%
TGCGGTGGTAGCATAAGCTG+TGG - Chr8:4700357-4700376 MsG0880042164.01.T01:intron 55.0%
TGTGGAACAGCCTGAAAGGC+TGG - Chr8:4700375-4700394 MsG0880042164.01.T01:intron 55.0%
TTCTGGACCTTGGCATGGCT+GGG + Chr8:4698720-4698739 None:intergenic 55.0%
! GTCTGGGATGCAAACCATGG+GGG - Chr8:4699434-4699453 MsG0880042164.01.T01:intron 55.0%
ACTGGCGGAGGATATCGGGA+TGG - Chr8:4699913-4699932 MsG0880042164.01.T01:intron 60.0%
CACACAGTCACGAGGTCGGT+TGG + Chr8:4702483-4702502 None:intergenic 60.0%
GAAGGAGGTGGAGCCTAGAG+AGG - Chr8:4700517-4700536 MsG0880042164.01.T01:intron 60.0%
GATGGAGGGTTTAGGAGGGG+AGG + Chr8:4699769-4699788 None:intergenic 60.0%
TCCGTCGTTGCGTTCCTCAC+AGG - Chr8:4697772-4697791 MsG0880042164.01.T01:CDS 60.0%
TCCTCCGCCAGTCAACCTCA+CGG + Chr8:4699905-4699924 None:intergenic 60.0%
! GTTCTGGACCTTGGCATGGC+TGG + Chr8:4698721-4698740 None:intergenic 60.0%
!! GAGCTTGCTGGCGAACTCTC+TGG - Chr8:4700762-4700781 MsG0880042164.01.T01:intron 60.0%
ACCGTGAGGTTGACTGGCGG+AGG - Chr8:4699901-4699920 MsG0880042164.01.T01:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - Chr8:4699588-4699607 MsG0880042164.01.T01:intron 65.0%
TAGGCTCCACCTCCTTCCCC+TGG + Chr8:4700514-4700533 None:intergenic 65.0%
TGTGGTGGTCGAGGTGGTGC+TGG - Chr8:4701170-4701189 MsG0880042164.01.T01:intron 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - Chr8:4699587-4699606 MsG0880042164.01.T01:intron 65.0%
! GGTGGTCGAGGTGGTGCTGG+TGG - Chr8:4701173-4701192 MsG0880042164.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 4697502 4702979 4697502 ID=MsG0880042164.01;Name=MsG0880042164.01
Chr8 mRNA 4697502 4702979 4697502 ID=MsG0880042164.01.T01;Parent=MsG0880042164.01;Name=MsG0880042164.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|0|0|3|0|293
Chr8 exon 4697502 4697843 4697502 ID=MsG0880042164.01.T01:exon:1500;Parent=MsG0880042164.01.T01
Chr8 exon 4701273 4701488 4701273 ID=MsG0880042164.01.T01:exon:1499;Parent=MsG0880042164.01.T01
Chr8 exon 4702656 4702979 4702656 ID=MsG0880042164.01.T01:exon:1498;Parent=MsG0880042164.01.T01
Chr8 CDS 4702656 4702979 4702656 ID=MsG0880042164.01.T01:cds;Parent=MsG0880042164.01.T01
Chr8 CDS 4701273 4701488 4701273 ID=MsG0880042164.01.T01:cds;Parent=MsG0880042164.01.T01
Chr8 CDS 4697502 4697843 4697502 ID=MsG0880042164.01.T01:cds;Parent=MsG0880042164.01.T01
Gene Sequence

>MsG0880042164.01.T01

ATGTCAGTAACGGGGTGGTTACAACCTGTTTATGTTAAATTTCCCACTCAACTTGATAGGTTGGTAGAGAAACACTTTTACAGCCAAAAAAACACAAATAGAAACTCGAAATTGAGGTCCAAGAGGTGCCATTGCAAAAGGAAAGAACAAGACACTCCCTTTTACTCAGTGTTACGGGAAGAGGATAGTCCATGGCAGAGTGGTGATGTATGGACCAATCTTGTTCTTTATCTTTTCACTCTTCATATCCCTCTCAGTTTTGGTGGATTCTCCGTCGTTGCGTTCCTCACAGGACAGCAACCTCTTCTTCACCCACAAACTCAGGCCATATCTCTTCTTACCATTCAAGTTCTTGAGTTTAATGCGGCTCTGGTTGTATTGAAGTCCACGGCTAAACCACAATATAAATTTTCAAGTTTCTTCGAAAATAAATTATTGAGTGACAGGAACTGGTTTTTGTCATCAGCTCTGGGATTTGGGTTTATTGCTCTTCTGGTTTGTCTAACATCACTACTTGCTGACAGATTACTTGGCTTTAAGACTGTTAGCAATCCAACATTGAAGGAGATCCTCCTAAACAGTGATATCTCAAGAGTGTGTTGTGTTACTGCTTACTGCATTGTCACTCCTCTTTTGGAAGAAGTTGTTTATAGAGGATTTCTGTTGACATCACTTTCCTCCACCATGAAGTGGCAACAAGCTGTAGTCATAAGCTCTGTTGTATTCAGTGCAATTCACTTCTCTAGTGAAAACTTTGTACAACTGTTCATCATTGGGTGTGTCCTTGGATGCTCCTATTGCTGGACTGGAAATTTGAAGTCTTCAATTGTTATTCATTCTTTGTACAATGCTTTGACCTTATTCATGACCTATTTTTATTAA
Protein sequence

>MsG0880042164.01.T01

MSVTGWLQPVYVKFPTQLDRLVEKHFYSQKNTNRNSKLRSKRCHCKRKEQDTPFYSVLREEDSPWQSGDVWTNLVLYLFTLHIPLSFGGFSVVAFLTGQQPLLHPQTQAISLLTIQVLEFNAALVVLKSTAKPQYKFSSFFENKLLSDRNWFLSSALGFGFIALLVCLTSLLADRLLGFKTVSNPTLKEILLNSDISRVCCVTAYCIVTPLLEEVVYRGFLLTSLSSTMKWQQAVVISSVVFSAIHFSSENFVQLFIIGCVLGCSYCWTGNLKSSIVIHSLYNALTLFMTYFY*