AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001264.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001264.01.T01 MTR_1g034240 76.842 285 13 3 1 232 1 285 1.96e-148 421
MsG0180001264.01.T01 MTR_4g068320 46.875 288 87 9 3 232 2 281 3.22e-66 211
MsG0180001264.01.T01 MTR_1g034210 36.039 308 64 7 1 232 1 251 3.28e-42 146
MsG0180001264.01.T01 MTR_1g034210 36.039 308 64 7 1 232 1 251 1.61e-41 145
MsG0180001264.01.T01 MTR_5g070440 52.083 48 23 0 7 54 21 68 1.99e-12 65.9
MsG0180001264.01.T01 MTR_3g005490 46.552 58 26 1 2 54 11 68 2.71e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001264.01.T01 AT3G18990 55.769 52 23 0 3 54 2 53 2.47e-14 71.6
MsG0180001264.01.T01 AT3G18990 55.769 52 23 0 3 54 2 53 2.65e-14 72.0

Find 113 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACATTAGAGAACAATTT+AGG 0.133108 1:+18518432 MsG0180001264.01.T01:three_prime_UTR
TCATTGCAGAATTTGTTTAA+TGG 0.251640 1:+18517497 MsG0180001264.01.T01:CDS
CTAAACTCAACCACGTTAAC+TGG 0.274983 1:+18517525 MsG0180001264.01.T01:CDS
CATTGCAGAATTTGTTTAAT+GGG 0.276665 1:+18517498 MsG0180001264.01.T01:CDS
TTATTAACCCCTTCCTCATT+AGG 0.282526 1:-18517665 None:intergenic
TGATGGCACTGTCTGGCGTC+TGG 0.293334 1:+18517126 MsG0180001264.01.T01:CDS
TATCGACTCCTTTGAATTCC+TGG 0.294296 1:+18517379 MsG0180001264.01.T01:CDS
GCGGCCCTCTTATTTATATA+GGG 0.304158 1:+18518172 MsG0180001264.01.T01:three_prime_UTR
TTGTCCTAGTGCCGTATCTT+GGG 0.306706 1:+18518879 MsG0180001264.01.T01:three_prime_UTR
CTTGTCCTAGTGCCGTATCT+TGG 0.309939 1:+18518878 MsG0180001264.01.T01:three_prime_UTR
TTTATATAGGGGATGTATAA+TGG 0.315777 1:+18518184 MsG0180001264.01.T01:three_prime_UTR
TATTTCCTAAGAAAATTATC+TGG 0.317191 1:-18517064 None:intergenic
GTACTCTGGTTTATTCAGTT+TGG 0.321400 1:+18518718 MsG0180001264.01.T01:three_prime_UTR
CATCCTTGGCTTAACTTTGC+CGG 0.321580 1:-18518404 None:intergenic
GCCTGTTCGCTGCCTATATA+AGG 0.330810 1:+18518378 MsG0180001264.01.T01:three_prime_UTR
TTACATTAGAGAACAATTTA+GGG 0.346465 1:+18518433 MsG0180001264.01.T01:three_prime_UTR
CTTTGCCGGCCTCCTTATAT+AGG 0.355535 1:-18518390 None:intergenic
AGAGATTCAAAGCATAATCT+TGG 0.363466 1:-18515229 None:intergenic
TTACCAATTGTCTAGTTTGA+AGG 0.397207 1:-18515311 None:intergenic
ATCCCTTCAAACTAGACAAT+TGG 0.398966 1:+18515308 MsG0180001264.01.T01:CDS
TTACTCAGATCTAAATTGTT+GGG 0.408825 1:-18515171 None:intergenic
CTCTTACTTCTGAGTGATCC+TGG 0.420066 1:+18518696 MsG0180001264.01.T01:three_prime_UTR
TGCGGCCCTCTTATTTATAT+AGG 0.421241 1:+18518171 MsG0180001264.01.T01:three_prime_UTR
TCTGAGTGATCCTGGTACTC+TGG 0.421596 1:+18518704 MsG0180001264.01.T01:three_prime_UTR
ATTCAGTCAACCAGAGATAT+AGG 0.424869 1:+18517584 MsG0180001264.01.T01:CDS
ATTACTCAGATCTAAATTGT+TGG 0.426490 1:-18515172 None:intergenic
CTGTTCCTGATGGCACTGTC+TGG 0.439890 1:+18517119 MsG0180001264.01.T01:CDS
CTTGCAATGCACCAGGAGTA+AGG 0.441488 1:-18517418 None:intergenic
TATATCTCTGGTTGACTGAA+TGG 0.443124 1:-18517582 None:intergenic
TTAAACAAATTCTGCAATGA+TGG 0.444180 1:-18517494 None:intergenic
CACTTTGTTTCGTGTAAAAG+AGG 0.446820 1:+18518511 MsG0180001264.01.T01:three_prime_UTR
CTGAATAGGGTTTGAGGAGA+AGG 0.449747 1:+18515138 MsG0180001264.01.T01:five_prime_UTR
TTCGTGTAAAAGAGGACGTC+AGG 0.453202 1:+18518519 MsG0180001264.01.T01:three_prime_UTR
ACATCCCCTATATAAATAAG+AGG 0.455776 1:-18518177 None:intergenic
TAATGTAATCATACCATCCT+TGG 0.459963 1:-18518418 None:intergenic
GATGGCACTGTCTGGCGTCT+GGG 0.465269 1:+18517127 MsG0180001264.01.T01:CDS
TCCTTATATAGGCAGCGAAC+AGG 0.471449 1:-18518379 None:intergenic
TAGGCGTTTGAACTTAGTTA+TGG 0.472201 1:+18518764 MsG0180001264.01.T01:three_prime_UTR
TGTCTAGTTTGAAGGGATGA+AGG 0.472503 1:-18515303 None:intergenic
ATTAAGCTTCAGATCTCTGA+TGG 0.476714 1:+18518346 MsG0180001264.01.T01:three_prime_UTR
CACGTTAACTGGGGAGATAT+CGG 0.483067 1:+18517536 MsG0180001264.01.T01:CDS
GACTTGCAGCACTACCTCTC+TGG 0.488129 1:-18518489 None:intergenic
GCACCAGGAGTAAGGTTTGA+AGG 0.495370 1:-18517410 None:intergenic
GGGTTGCAATAGTCGAAAGC+TGG 0.499258 1:-18517093 None:intergenic
CAGCAGAAGAGAAAGAGAAA+GGG 0.502320 1:+18518095 MsG0180001264.01.T01:CDS
GCCCTTCGTACGGCTTCTCA+TGG 0.503637 1:-18517313 None:intergenic
GAACTGAACACCTATATCTC+TGG 0.504709 1:-18517594 None:intergenic
TAACTAAGTTCAAACGCCTA+TGG 0.505970 1:-18518761 None:intergenic
ACAGCAGAAGAGAAAGAGAA+AGG 0.506257 1:+18518094 MsG0180001264.01.T01:CDS
CTGATTTAGTTGAGCTGACA+CGG 0.508771 1:-18518613 None:intergenic
TAAACTCAACCACGTTAACT+GGG 0.517161 1:+18517526 MsG0180001264.01.T01:CDS
TACCAATTGTCTAGTTTGAA+GGG 0.519590 1:-18515310 None:intergenic
TGAATATAATGACTCAGTTA+CGG 0.523065 1:+18518958 MsG0180001264.01.T01:three_prime_UTR
TCACCTTCAAACCTTACTCC+TGG 0.530653 1:+18517407 MsG0180001264.01.T01:CDS
AGACGCCAGACAGTGCCATC+AGG 0.531089 1:-18517124 None:intergenic
GCATAGCAAGGCCCTTCGTA+CGG 0.535143 1:-18517323 None:intergenic
GTCTAGTTTGAAGGGATGAA+GGG 0.543517 1:-18515302 None:intergenic
GGTTTGAAGGTGATGAATCC+AGG 0.544026 1:-18517397 None:intergenic
GGATGATAATTTGCATAGCA+AGG 0.545527 1:-18517335 None:intergenic
AGAATGAGCTTGTGAAAAGA+AGG 0.547922 1:-18515279 None:intergenic
AACTCTACAGAATGGATGGT+TGG 0.548610 1:-18518144 None:intergenic
ATTGCAGAATTTGTTTAATG+GGG 0.548631 1:+18517499 MsG0180001264.01.T01:CDS
TCCTGGTGCATTGCAAGACA+AGG 0.548892 1:+18517424 MsG0180001264.01.T01:CDS
ACCTTGTCTTGCAATGCACC+AGG 0.549286 1:-18517425 None:intergenic
ATTCAAAGCATAATCTTGGA+AGG 0.549766 1:-18515225 None:intergenic
TTGTGTAACTGTAGGTGCAC+TGG 0.551946 1:+18517994 MsG0180001264.01.T01:intron
TGATTGAAAGTTGAAAACTT+TGG 0.552047 1:-18515199 None:intergenic
CTGACACGGTGCTGCAAGTG+AGG 0.554904 1:-18518599 None:intergenic
TGTCCTAGTGCCGTATCTTG+GGG 0.555034 1:+18518880 MsG0180001264.01.T01:three_prime_UTR
CGCTGCCTATATAAGGAGGC+CGG 0.556022 1:+18518385 MsG0180001264.01.T01:three_prime_UTR
ACTGAATAAACCAGAGTACC+AGG 0.558954 1:-18518714 None:intergenic
TTGCGCTATCCTAATGAGGA+AGG 0.562431 1:+18517656 MsG0180001264.01.T01:CDS
CGGCCCTCTTATTTATATAG+GGG 0.563668 1:+18518173 MsG0180001264.01.T01:three_prime_UTR
GCCATGAGAAGCCGTACGAA+GGG 0.566427 1:+18517312 MsG0180001264.01.T01:intron
TATATAAATAAGAGGGCCGC+AGG 0.566564 1:-18518169 None:intergenic
TTAGAGAACAATTTAGGGGA+AGG 0.568521 1:+18518438 MsG0180001264.01.T01:three_prime_UTR
TTTGGCTTGGTTGTGAAGAA+GGG 0.575829 1:-18518550 None:intergenic
TGCAGAATTTGTTTAATGGG+GGG 0.577486 1:+18517501 MsG0180001264.01.T01:CDS
TTGCAGAATTTGTTTAATGG+GGG 0.578544 1:+18517500 MsG0180001264.01.T01:CDS
TGCGCTATCCTAATGAGGAA+GGG 0.580496 1:+18517657 MsG0180001264.01.T01:CDS
CAAAAGTTAACCCCAAGATA+CGG 0.581416 1:-18518890 None:intergenic
GAAATTGCGCTATCCTAATG+AGG 0.581484 1:+18517652 MsG0180001264.01.T01:CDS
GGTTGCAATAGTCGAAAGCT+GGG 0.584695 1:-18517092 None:intergenic
TGATGAATCCAGGAATTCAA+AGG 0.585718 1:-18517387 None:intergenic
GCGCTATCCTAATGAGGAAG+GGG 0.586754 1:+18517658 MsG0180001264.01.T01:CDS
TCTGGCGTCTGGGATTGAAA+AGG 0.595088 1:+18517137 MsG0180001264.01.T01:CDS
CGATATCTCCCCAGTTAACG+TGG 0.595115 1:-18517535 None:intergenic
CACTGCTGAAAATGATGAGG+AGG 0.595680 1:+18518021 MsG0180001264.01.T01:CDS
CGCAGGACAACTCTACAGAA+TGG 0.599765 1:-18518152 None:intergenic
GCAACCCTCACTGTTCCTGA+TGG 0.602871 1:+18517109 MsG0180001264.01.T01:CDS
CATCCCCTATATAAATAAGA+GGG 0.603183 1:-18518176 None:intergenic
TTAAGCTTCAGATCTCTGAT+GGG 0.604595 1:+18518347 MsG0180001264.01.T01:three_prime_UTR
GGACAACTCTACAGAATGGA+TGG 0.606558 1:-18518148 None:intergenic
AGAAAACTTCAAGAAAGAAG+CGG 0.610439 1:+18517699 MsG0180001264.01.T01:CDS
GCGCAATTTCAATCCTTCAG+TGG 0.610517 1:-18517639 None:intergenic
GATGGAGTATGATTCTTCGC+TGG 0.611475 1:-18517476 None:intergenic
AGCCATGAGAAGCCGTACGA+AGG 0.612723 1:+18517311 MsG0180001264.01.T01:intron
CGGCAAAGTTAAGCCAAGGA+TGG 0.614481 1:+18518405 MsG0180001264.01.T01:three_prime_UTR
TAACCCCAAGATACGGCACT+AGG 0.617673 1:-18518883 None:intergenic
AGATCTCTGATGGGAGACAG+TGG 0.629937 1:+18518356 MsG0180001264.01.T01:three_prime_UTR
AGGCCGGCAAAGTTAAGCCA+AGG 0.645093 1:+18518401 MsG0180001264.01.T01:three_prime_UTR
TACATTAGAGAACAATTTAG+GGG 0.655070 1:+18518434 MsG0180001264.01.T01:three_prime_UTR
TGACACGGTGCTGCAAGTGA+GGG 0.655075 1:-18518598 None:intergenic
AGTGCCATCAGGAACAGTGA+GGG 0.674235 1:-18517113 None:intergenic
TGTTCGCTGCCTATATAAGG+AGG 0.677351 1:+18518381 MsG0180001264.01.T01:three_prime_UTR
AGCCACTGCTGAAAATGATG+AGG 0.685162 1:+18518018 MsG0180001264.01.T01:CDS
TGAGCTGCTTAGAACCAGAG+AGG 0.691078 1:+18518475 MsG0180001264.01.T01:three_prime_UTR
CAGTGCCATCAGGAACAGTG+AGG 0.694859 1:-18517114 None:intergenic
TTGTGAAAAGAAGGACGAGG+AGG 0.697547 1:-18515270 None:intergenic
AGCTTGTGAAAAGAAGGACG+AGG 0.710821 1:-18515273 None:intergenic
AAACTCAACCACGTTAACTG+GGG 0.714026 1:+18517527 MsG0180001264.01.T01:CDS
CATTCTGTAGAGTTGTCCTG+CGG 0.717327 1:+18518153 MsG0180001264.01.T01:exon
GTTAACTGGGGAGATATCGG+TGG 0.726802 1:+18517539 MsG0180001264.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTAAATAAAT+TGG - Chr1:18516795-18516814 None:intergenic 0.0%
!! CTTAAAATCATTAATATATG+TGG + Chr1:18515834-18515853 MsG0180001264.01.T01:intron 15.0%
!! TTATGAGTATTACTAATATT+TGG + Chr1:18517008-18517027 MsG0180001264.01.T01:intron 15.0%
!!! AATAAAGTTTGGATTTTTTT+AGG + Chr1:18515490-18515509 MsG0180001264.01.T01:intron 15.0%
!!! ATAATTTTCTTAGGAAATAT+GGG + Chr1:18517068-18517087 MsG0180001264.01.T01:CDS 15.0%
!!! ATCTTTTAATTTTGGTAAAA+AGG + Chr1:18516427-18516446 MsG0180001264.01.T01:intron 15.0%
!!! CACATATATTAATGATTTTA+AGG - Chr1:18515836-18515855 None:intergenic 15.0%
!!! TAGTTTTGAATCTTTTAATA+TGG + Chr1:18518787-18518806 MsG0180001264.01.T01:three_prime_UTR 15.0%
!!! TATGAATTTAAGTTTACATA+AGG + Chr1:18516859-18516878 MsG0180001264.01.T01:intron 15.0%
!!! TTAACTTTTGTTTTTTGTTT+TGG + Chr1:18518903-18518922 MsG0180001264.01.T01:three_prime_UTR 15.0%
!!! TTCTTTTGATCTTTTAATTT+TGG + Chr1:18516419-18516438 MsG0180001264.01.T01:intron 15.0%
!!! TTTTGTTTAAAGTTTTTGAT+TGG + Chr1:18515383-18515402 MsG0180001264.01.T01:intron 15.0%
!! ATCCAAACTTTATTATCAAA+AGG - Chr1:18515484-18515503 None:intergenic 20.0%
!! ATTACATTAGAGAACAATTT+AGG + Chr1:18518432-18518451 MsG0180001264.01.T01:three_prime_UTR 20.0%
!! TATTTCCTAAGAAAATTATC+TGG - Chr1:18517067-18517086 None:intergenic 20.0%
!! TCCAAACTTTATTATCAAAA+GGG - Chr1:18515483-18515502 None:intergenic 20.0%
!! TTACATTAGAGAACAATTTA+GGG + Chr1:18518433-18518452 MsG0180001264.01.T01:three_prime_UTR 20.0%
!! TTTAATTGAGACTATCATAT+TGG + Chr1:18515988-18516007 MsG0180001264.01.T01:intron 20.0%
!!! AAGCATAAAAGTATTTTTGT+TGG - Chr1:18516840-18516859 None:intergenic 20.0%
!!! AATTTAATTTGTGTAACTGT+AGG + Chr1:18517986-18518005 MsG0180001264.01.T01:intron 20.0%
!!! GATAATTTTCTTAGGAAATA+TGG + Chr1:18517067-18517086 MsG0180001264.01.T01:CDS 20.0%
!!! TAATTTTCTTAGGAAATATG+GGG + Chr1:18517069-18517088 MsG0180001264.01.T01:CDS 20.0%
!!! TTTGTTTTTTGTTTTGGTTT+TGG + Chr1:18518909-18518928 MsG0180001264.01.T01:three_prime_UTR 20.0%
! AAAAACTACTCATTTCCAAA+TGG - Chr1:18516537-18516556 None:intergenic 25.0%
! AAAACCTCTTCTATTAAGTA+TGG + Chr1:18516486-18516505 MsG0180001264.01.T01:intron 25.0%
! AAAAGATCAAAAGAAGTTCA+AGG - Chr1:18516414-18516433 None:intergenic 25.0%
! AAACTCATGATCAAAATCAT+GGG - Chr1:18515529-18515548 None:intergenic 25.0%
! AAATCAGCTAAAAATTAGCA+GGG + Chr1:18518629-18518648 MsG0180001264.01.T01:three_prime_UTR 25.0%
! AGACAATGAAATCATAAACA+TGG - Chr1:18516943-18516962 None:intergenic 25.0%
! ATAAACATGGAATCATAACA+CGG - Chr1:18516930-18516949 None:intergenic 25.0%
! ATTACTCAGATCTAAATTGT+TGG - Chr1:18515175-18515194 None:intergenic 25.0%
! CTTTGCAAAAAGAATTTGAA+CGG + Chr1:18518310-18518329 MsG0180001264.01.T01:three_prime_UTR 25.0%
! TAAATCAGCTAAAAATTAGC+AGG + Chr1:18518628-18518647 MsG0180001264.01.T01:three_prime_UTR 25.0%
! TACATTAGAGAACAATTTAG+GGG + Chr1:18518434-18518453 MsG0180001264.01.T01:three_prime_UTR 25.0%
! TAGTCTCAATTAAACACATT+TGG - Chr1:18515982-18516001 None:intergenic 25.0%
! TCTTCAATGTCTTCAAAAAT+AGG - Chr1:18517359-18517378 None:intergenic 25.0%
! TCTTTGAATGAAAATTCTTG+TGG + Chr1:18515748-18515767 MsG0180001264.01.T01:intron 25.0%
! TGAATATAATGACTCAGTTA+CGG + Chr1:18518958-18518977 MsG0180001264.01.T01:three_prime_UTR 25.0%
! TGATTGAAAGTTGAAAACTT+TGG - Chr1:18515202-18515221 None:intergenic 25.0%
! TTAAACAAATTCTGCAATGA+TGG - Chr1:18517497-18517516 None:intergenic 25.0%
! TTACTCAGATCTAAATTGTT+GGG - Chr1:18515174-18515193 None:intergenic 25.0%
! TTATGATTGTTGCAAGAAAA+GGG + Chr1:18515418-18515437 MsG0180001264.01.T01:intron 25.0%
! TTCTATTAAGTATGGAAAGA+TGG + Chr1:18516494-18516513 MsG0180001264.01.T01:intron 25.0%
! TTGTTATGATTCTTGATGAA+GGG + Chr1:18515559-18515578 MsG0180001264.01.T01:intron 25.0%
! TTTATATAGGGGATGTATAA+TGG + Chr1:18518184-18518203 MsG0180001264.01.T01:three_prime_UTR 25.0%
! TTTGACTAAAAAGCTGAATA+GGG + Chr1:18515125-18515144 MsG0180001264.01.T01:five_prime_UTR 25.0%
! TTTGCATATCTAGAAATTTG+AGG - Chr1:18516463-18516482 None:intergenic 25.0%
!! AACCAACCAATTCAATTTTA+GGG - Chr1:18515705-18515724 None:intergenic 25.0%
!! ATTGCAGAATTTGTTTAATG+GGG + Chr1:18517499-18517518 MsG0180001264.01.T01:CDS 25.0%
!! CATTGCAGAATTTGTTTAAT+GGG + Chr1:18517498-18517517 MsG0180001264.01.T01:CDS 25.0%
!! TAACCAACCAATTCAATTTT+AGG - Chr1:18515706-18515725 None:intergenic 25.0%
!! TCATTGCAGAATTTGTTTAA+TGG + Chr1:18517497-18517516 MsG0180001264.01.T01:CDS 25.0%
!! TTTCTAGTATTCACTTATGA+AGG + Chr1:18517228-18517247 MsG0180001264.01.T01:intron 25.0%
!! TTTTAGCCCTAAAATTGAAT+TGG + Chr1:18515696-18515715 MsG0180001264.01.T01:intron 25.0%
!!! AATGTTATTTTCAATTGCAG+AGG + Chr1:18517038-18517057 MsG0180001264.01.T01:intron 25.0%
!!! ACCCTTTTGATAATAAAGTT+TGG + Chr1:18515479-18515498 MsG0180001264.01.T01:intron 25.0%
!!! AGTTTTGTAATTTGTCTATC+TGG - Chr1:18518665-18518684 None:intergenic 25.0%
!!! ATGGATATTTTGTTTTGACT+TGG + Chr1:18518806-18518825 MsG0180001264.01.T01:three_prime_UTR 25.0%
!!! GTTTAGTTTTGTGATTTTTC+TGG + Chr1:18515635-18515654 MsG0180001264.01.T01:intron 25.0%
!!! TTATTATCAAAAGGGTATCA+GGG - Chr1:18515475-18515494 None:intergenic 25.0%
!!! TTGATACTTTTTATGTCCAT+AGG + Chr1:18518745-18518764 MsG0180001264.01.T01:three_prime_UTR 25.0%
!!! TTTATTATCAAAAGGGTATC+AGG - Chr1:18515476-18515495 None:intergenic 25.0%
AAAAGAAGTTCAAGGATTTG+GGG - Chr1:18516406-18516425 None:intergenic 30.0%
ACATCCCCTATATAAATAAG+AGG - Chr1:18518180-18518199 None:intergenic 30.0%
ACTAACTACCATGCTAAAAA+CGG - Chr1:18516572-18516591 None:intergenic 30.0%
AGAAAACTTCAAGAAAGAAG+CGG + Chr1:18517699-18517718 MsG0180001264.01.T01:CDS 30.0%
AGAGATTCAAAGCATAATCT+TGG - Chr1:18515232-18515251 None:intergenic 30.0%
ATTAACTACCATGCTGAAAA+TGG - Chr1:18516133-18516152 None:intergenic 30.0%
ATTCAAAGCATAATCTTGGA+AGG - Chr1:18515228-18515247 None:intergenic 30.0%
CAAAAGAAGTTCAAGGATTT+GGG - Chr1:18516407-18516426 None:intergenic 30.0%
CAAACTCATGATCAAAATCA+TGG - Chr1:18515530-18515549 None:intergenic 30.0%
CACTTATTAAGTATGACCTT+TGG + Chr1:18516057-18516076 MsG0180001264.01.T01:intron 30.0%
CATCCCCTATATAAATAAGA+GGG - Chr1:18518179-18518198 None:intergenic 30.0%
CTTTCCATACTTAATAGAAG+AGG - Chr1:18516493-18516512 None:intergenic 30.0%
GGAAAAAACAATCAGTGATT+AGG - Chr1:18516659-18516678 None:intergenic 30.0%
GTTATGATTGTTGCAAGAAA+AGG + Chr1:18515417-18515436 MsG0180001264.01.T01:intron 30.0%
GTTGTTATGATTCTTGATGA+AGG + Chr1:18515558-18515577 MsG0180001264.01.T01:intron 30.0%
GTTTGACTAAAAAGCTGAAT+AGG + Chr1:18515124-18515143 MsG0180001264.01.T01:five_prime_UTR 30.0%
TAATGTAATCATACCATCCT+TGG - Chr1:18518421-18518440 None:intergenic 30.0%
TCAAAAGAAGTTCAAGGATT+TGG - Chr1:18516408-18516427 None:intergenic 30.0%
TCTAGAAATTTGAGGATTTG+CGG - Chr1:18516455-18516474 None:intergenic 30.0%
TCTTCTCTTTCACTTAAAAC+AGG - Chr1:18515920-18515939 None:intergenic 30.0%
TTTAAACTCGAGATTTGACT+CGG - Chr1:18516974-18516993 None:intergenic 30.0%
! AAATCTTCTAAGAGCTTACT+TGG - Chr1:18517734-18517753 None:intergenic 30.0%
! AAGAATTTGAACGGTTTTTC+AGG + Chr1:18518319-18518338 MsG0180001264.01.T01:three_prime_UTR 30.0%
! ATTTTCAGTCACTCATTCAA+AGG - Chr1:18516311-18516330 None:intergenic 30.0%
! ATTTTGTTCAACGTTACCAT+TGG + Chr1:18517195-18517214 MsG0180001264.01.T01:intron 30.0%
! GGATTCCAGATAATTTTCTT+AGG + Chr1:18517059-18517078 MsG0180001264.01.T01:CDS 30.0%
! TACCAATTGTCTAGTTTGAA+GGG - Chr1:18515313-18515332 None:intergenic 30.0%
! TCAAATTCTTTTTGCAAAGC+AGG - Chr1:18518309-18518328 None:intergenic 30.0%
! TTACCAATTGTCTAGTTTGA+AGG - Chr1:18515314-18515333 None:intergenic 30.0%
! TTGCAGAATTTGTTTAATGG+GGG + Chr1:18517500-18517519 MsG0180001264.01.T01:CDS 30.0%
! TTTTAAACGGGTCATATACT+CGG - Chr1:18516280-18516299 None:intergenic 30.0%
! TTTTTAACAGGTCATGTACT+CGG - Chr1:18516680-18516699 None:intergenic 30.0%
!! AAATTGGTTTGACCTAAGTA+TGG - Chr1:18516779-18516798 None:intergenic 30.0%
!! AATTGGTTTGACCTAAGTAT+GGG - Chr1:18516778-18516797 None:intergenic 30.0%
!! CATGATTTTGATCATGAGTT+TGG + Chr1:18515528-18515547 MsG0180001264.01.T01:intron 30.0%
!! TGATTTTAAGGAAAACATCG+AGG - Chr1:18515824-18515843 None:intergenic 30.0%
!!! AAAGGTGCGTTGTTTTTAAA+CGG - Chr1:18516293-18516312 None:intergenic 30.0%
!!! AAAGGTGCGTTTTTTTTAAC+AGG - Chr1:18516692-18516711 None:intergenic 30.0%
!!! TCACCTTTTGAAATTATGAC+CGG + Chr1:18517882-18517901 MsG0180001264.01.T01:intron 30.0%
AAAAAGCTGAATAGGGTTTG+AGG + Chr1:18515132-18515151 MsG0180001264.01.T01:five_prime_UTR 35.0%
ACACATTTCCAAATTGCTAC+TGG - Chr1:18516093-18516112 None:intergenic 35.0%
ACACCGGTCATAATTTCAAA+AGG - Chr1:18517888-18517907 None:intergenic 35.0%
AGAATGAGCTTGTGAAAAGA+AGG - Chr1:18515282-18515301 None:intergenic 35.0%
AGCCCTAAAATTGAATTGGT+TGG + Chr1:18515700-18515719 MsG0180001264.01.T01:intron 35.0%
ATCCCTTCAAACTAGACAAT+TGG + Chr1:18515308-18515327 MsG0180001264.01.T01:CDS 35.0%
ATTAAGCTTCAGATCTCTGA+TGG + Chr1:18518346-18518365 MsG0180001264.01.T01:three_prime_UTR 35.0%
ATTCAGTCAACCAGAGATAT+AGG + Chr1:18517584-18517603 MsG0180001264.01.T01:CDS 35.0%
CAAAAGTTAACCCCAAGATA+CGG - Chr1:18518893-18518912 None:intergenic 35.0%
GAGTTTAAAAAGTCCACTGA+AGG + Chr1:18517626-18517645 MsG0180001264.01.T01:CDS 35.0%
TAAACTCAACCACGTTAACT+GGG + Chr1:18517526-18517545 MsG0180001264.01.T01:CDS 35.0%
TAACTAAGTTCAAACGCCTA+TGG - Chr1:18518764-18518783 None:intergenic 35.0%
TACTGGCAATAACAATCCAA+AGG - Chr1:18516076-18516095 None:intergenic 35.0%
TAGGCGTTTGAACTTAGTTA+TGG + Chr1:18518764-18518783 MsG0180001264.01.T01:three_prime_UTR 35.0%
TATATCTCTGGTTGACTGAA+TGG - Chr1:18517585-18517604 None:intergenic 35.0%
TGATGAATCCAGGAATTCAA+AGG - Chr1:18517390-18517409 None:intergenic 35.0%
TGTTATTGCCAGTAGCAATT+TGG + Chr1:18516082-18516101 MsG0180001264.01.T01:intron 35.0%
TTAAGCTTCAGATCTCTGAT+GGG + Chr1:18518347-18518366 MsG0180001264.01.T01:three_prime_UTR 35.0%
TTAGAGAACAATTTAGGGGA+AGG + Chr1:18518438-18518457 MsG0180001264.01.T01:three_prime_UTR 35.0%
TTATTAACCCCTTCCTCATT+AGG - Chr1:18517668-18517687 None:intergenic 35.0%
! AAACCTTTTCTCACCAGAAA+AGG + Chr1:18516378-18516397 MsG0180001264.01.T01:intron 35.0%
! ATGAATCTCCATTTTCAGCA+TGG + Chr1:18516122-18516141 MsG0180001264.01.T01:intron 35.0%
! ATTCTTTTTGCAAAGCAGGA+AGG - Chr1:18518305-18518324 None:intergenic 35.0%
! CACTTTGTTTCGTGTAAAAG+AGG + Chr1:18518511-18518530 MsG0180001264.01.T01:three_prime_UTR 35.0%
! GGATGATAATTTGCATAGCA+AGG - Chr1:18517338-18517357 None:intergenic 35.0%
! GTACTCTGGTTTATTCAGTT+TGG + Chr1:18518718-18518737 MsG0180001264.01.T01:three_prime_UTR 35.0%
! GTTGCAAGAAAAGGGTTTTT+AGG + Chr1:18515426-18515445 MsG0180001264.01.T01:intron 35.0%
! TGCAGAATTTGTTTAATGGG+GGG + Chr1:18517501-18517520 MsG0180001264.01.T01:CDS 35.0%
! TTTTTGCATGGCTCACATTT+TGG - Chr1:18518571-18518590 None:intergenic 35.0%
!! GAAAGATGGATTGCTATTAC+TGG + Chr1:18516508-18516527 MsG0180001264.01.T01:intron 35.0%
!! GCACTGACATTTTAGATCAA+AGG + Chr1:18517784-18517803 MsG0180001264.01.T01:intron 35.0%
!! GTGTTGAAATTTTGATCACC+AGG + Chr1:18515661-18515680 MsG0180001264.01.T01:intron 35.0%
!! GTTAGTTTGTTTGTGTCTAG+TGG + Chr1:18515722-18515741 MsG0180001264.01.T01:intron 35.0%
!! TAGAAAGTATCCAATGCCAA+TGG - Chr1:18517214-18517233 None:intergenic 35.0%
!! TTGCAAGACAAGGTTTTTAG+TGG + Chr1:18517434-18517453 MsG0180001264.01.T01:CDS 35.0%
!!! AAGGTGCGTTGTTTTTAAAC+GGG - Chr1:18516292-18516311 None:intergenic 35.0%
!!! ATGAATCTCCGTTTTTAGCA+TGG + Chr1:18516561-18516580 MsG0180001264.01.T01:intron 35.0%
!!! CAAGGTTTTTAGTGGATCTT+TGG + Chr1:18517442-18517461 MsG0180001264.01.T01:CDS 35.0%
!!! GAAAAGGGTTTTTAGGTTTG+TGG + Chr1:18515433-18515452 MsG0180001264.01.T01:intron 35.0%
AAACTCAACCACGTTAACTG+GGG + Chr1:18517527-18517546 MsG0180001264.01.T01:CDS 40.0%
AACTCTACAGAATGGATGGT+TGG - Chr1:18518147-18518166 None:intergenic 40.0%
AATGATGTGTGTCAGACACT+CGG - Chr1:18517815-18517834 None:intergenic 40.0%
ACAGCAGAAGAGAAAGAGAA+AGG + Chr1:18518094-18518113 MsG0180001264.01.T01:CDS 40.0%
CAAGGAAGTTTGAGGATTCT+CGG - Chr1:18516725-18516744 None:intergenic 40.0%
CAGCAGAAGAGAAAGAGAAA+GGG + Chr1:18518095-18518114 MsG0180001264.01.T01:CDS 40.0%
CTAAAATCAACTCAGCAACC+TGG - Chr1:18515682-18515701 None:intergenic 40.0%
CTAAACTCAACCACGTTAAC+TGG + Chr1:18517525-18517544 MsG0180001264.01.T01:CDS 40.0%
CTGATTTAGTTGAGCTGACA+CGG - Chr1:18518616-18518635 None:intergenic 40.0%
GAAAAGGTTGACAACCGAAT+TGG + Chr1:18517153-18517172 MsG0180001264.01.T01:intron 40.0%
GAAATTGCGCTATCCTAATG+AGG + Chr1:18517652-18517671 MsG0180001264.01.T01:CDS 40.0%
GAACTGAACACCTATATCTC+TGG - Chr1:18517597-18517616 None:intergenic 40.0%
GGCTTTACATTTGCAGATCT+AGG - Chr1:18516344-18516363 None:intergenic 40.0%
TATATAAATAAGAGGGCCGC+AGG - Chr1:18518172-18518191 None:intergenic 40.0%
TGCTATTACTGGTAGCCATT+TGG + Chr1:18516519-18516538 MsG0180001264.01.T01:intron 40.0%
TGGTCGTGTGTGTTAATTTC+AGG + Chr1:18516254-18516273 MsG0180001264.01.T01:intron 40.0%
TTCAACGTTACCATTGGCAT+TGG + Chr1:18517201-18517220 MsG0180001264.01.T01:intron 40.0%
! ACTGAATAAACCAGAGTACC+AGG - Chr1:18518717-18518736 None:intergenic 40.0%
! CGGCCCTCTTATTTATATAG+GGG + Chr1:18518173-18518192 MsG0180001264.01.T01:three_prime_UTR 40.0%
! CTGGTGAGAAAAGGTTTTTC+TGG - Chr1:18516375-18516394 None:intergenic 40.0%
! GAGGGTTCAACATTTTTGCA+TGG - Chr1:18518583-18518602 None:intergenic 40.0%
! GCGGCCCTCTTATTTATATA+GGG + Chr1:18518172-18518191 MsG0180001264.01.T01:three_prime_UTR 40.0%
! GTCTAGTTTGAAGGGATGAA+GGG - Chr1:18515305-18515324 None:intergenic 40.0%
! TGCGGCCCTCTTATTTATAT+AGG + Chr1:18518171-18518190 MsG0180001264.01.T01:three_prime_UTR 40.0%
! TGTCTAGTTTGAAGGGATGA+AGG - Chr1:18515306-18515325 None:intergenic 40.0%
!! AAGGTTTTTCTGGTGAGAAG+AGG - Chr1:18516365-18516384 None:intergenic 40.0%
!! TATCGACTCCTTTGAATTCC+TGG + Chr1:18517379-18517398 MsG0180001264.01.T01:CDS 40.0%
!! TTTGGCTTGGTTGTGAAGAA+GGG - Chr1:18518553-18518572 None:intergenic 40.0%
!!! TTTTGGCTTGGTTGTGAAGA+AGG - Chr1:18518554-18518573 None:intergenic 40.0%
ACAGGCAAGCATCTGCAATT+AGG - Chr1:18516233-18516252 None:intergenic 45.0%
AGCCACTGCTGAAAATGATG+AGG + Chr1:18518018-18518037 MsG0180001264.01.T01:CDS 45.0%
AGCTTGTGAAAAGAAGGACG+AGG - Chr1:18515276-18515295 None:intergenic 45.0%
ATGATGTGTGTCAGACACTC+GGG - Chr1:18517814-18517833 None:intergenic 45.0%
ATTAACACACACGACCACAC+AGG - Chr1:18516251-18516270 None:intergenic 45.0%
ATTCTCGGTCACACGTTCAA+AGG - Chr1:18516710-18516729 None:intergenic 45.0%
CAAAGCAGGAAGGCAAATAC+TGG - Chr1:18518295-18518314 None:intergenic 45.0%
CACGTTAACTGGGGAGATAT+CGG + Chr1:18517536-18517555 MsG0180001264.01.T01:CDS 45.0%
CACTGCTGAAAATGATGAGG+AGG + Chr1:18518021-18518040 MsG0180001264.01.T01:CDS 45.0%
CAGCCATCGACAAACCAATT+CGG - Chr1:18517170-18517189 None:intergenic 45.0%
CATCCTTGGCTTAACTTTGC+CGG - Chr1:18518407-18518426 None:intergenic 45.0%
CATTCTGTAGAGTTGTCCTG+CGG + Chr1:18518153-18518172 MsG0180001264.01.T01:exon 45.0%
CGAGAATCCTCAAACTTCCT+TGG + Chr1:18516723-18516742 MsG0180001264.01.T01:intron 45.0%
CTCTTACTTCTGAGTGATCC+TGG + Chr1:18518696-18518715 MsG0180001264.01.T01:three_prime_UTR 45.0%
CTGAATAGGGTTTGAGGAGA+AGG + Chr1:18515138-18515157 MsG0180001264.01.T01:five_prime_UTR 45.0%
CTTCCTGTGTCAGTGTTTCA+TGG + Chr1:18517926-18517945 MsG0180001264.01.T01:intron 45.0%
GATGGAGTATGATTCTTCGC+TGG - Chr1:18517479-18517498 None:intergenic 45.0%
GCAAAGACCAAGGAAGTTTG+AGG - Chr1:18516733-18516752 None:intergenic 45.0%
GCGCAATTTCAATCCTTCAG+TGG - Chr1:18517642-18517661 None:intergenic 45.0%
GGACAACTCTACAGAATGGA+TGG - Chr1:18518151-18518170 None:intergenic 45.0%
GGTTGCAATAGTCGAAAGCT+GGG - Chr1:18517095-18517114 None:intergenic 45.0%
GGTTTGAAGGTGATGAATCC+AGG - Chr1:18517400-18517419 None:intergenic 45.0%
TAGCCATGAAACACTGACAC+AGG - Chr1:18517932-18517951 None:intergenic 45.0%
TCACCTTCAAACCTTACTCC+TGG + Chr1:18517407-18517426 MsG0180001264.01.T01:CDS 45.0%
TCCTTATATAGGCAGCGAAC+AGG - Chr1:18518382-18518401 None:intergenic 45.0%
TGCGCTATCCTAATGAGGAA+GGG + Chr1:18517657-18517676 MsG0180001264.01.T01:CDS 45.0%
TGTTCGCTGCCTATATAAGG+AGG + Chr1:18518381-18518400 MsG0180001264.01.T01:three_prime_UTR 45.0%
TTCGTGTAAAAGAGGACGTC+AGG + Chr1:18518519-18518538 MsG0180001264.01.T01:three_prime_UTR 45.0%
TTGCAGATCTAGGAAGTTCG+AGG - Chr1:18516334-18516353 None:intergenic 45.0%
TTGCGCTATCCTAATGAGGA+AGG + Chr1:18517656-18517675 MsG0180001264.01.T01:CDS 45.0%
TTGTCCTAGTGCCGTATCTT+GGG + Chr1:18518879-18518898 MsG0180001264.01.T01:three_prime_UTR 45.0%
TTGTGAAAAGAAGGACGAGG+AGG - Chr1:18515273-18515292 None:intergenic 45.0%
TTGTGTAACTGTAGGTGCAC+TGG + Chr1:18517994-18518013 MsG0180001264.01.T01:intron 45.0%
! CTCCTCATCATTTTCAGCAG+TGG - Chr1:18518023-18518042 None:intergenic 45.0%
!! CAACCGAATTGGTTTGTCGA+TGG + Chr1:18517164-18517183 MsG0180001264.01.T01:intron 45.0%
!! GCTCCTTTTCTGGTGAGAAA+AGG - Chr1:18516384-18516403 None:intergenic 45.0%
!!! ATTTTTTTTTTTTTTTGAAT+TGG + Chr1:18515358-18515377 MsG0180001264.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTGAATT+GGG + Chr1:18515359-18515378 MsG0180001264.01.T01:intron 5.0%
AACCACACGTGTCAGTGTAG+CGG - Chr1:18517849-18517868 None:intergenic 50.0%
ACCTTGTCTTGCAATGCACC+AGG - Chr1:18517428-18517447 None:intergenic 50.0%
ACGCACTGAGATGACAACAC+CGG - Chr1:18517904-18517923 None:intergenic 50.0%
AGATCTCTGATGGGAGACAG+TGG + Chr1:18518356-18518375 MsG0180001264.01.T01:three_prime_UTR 50.0%
AGTGCCATCAGGAACAGTGA+GGG - Chr1:18517116-18517135 None:intergenic 50.0%
ATTGCAGATGCTTGCCTGTG+TGG + Chr1:18516234-18516253 MsG0180001264.01.T01:intron 50.0%
CGATATCTCCCCAGTTAACG+TGG - Chr1:18517538-18517557 None:intergenic 50.0%
CGCAGGACAACTCTACAGAA+TGG - Chr1:18518155-18518174 None:intergenic 50.0%
CGGCAAAGTTAAGCCAAGGA+TGG + Chr1:18518405-18518424 MsG0180001264.01.T01:three_prime_UTR 50.0%
CTACCAACGAGCAAAGACCA+AGG - Chr1:18516743-18516762 None:intergenic 50.0%
CTTGCAATGCACCAGGAGTA+AGG - Chr1:18517421-18517440 None:intergenic 50.0%
CTTGTCCTAGTGCCGTATCT+TGG + Chr1:18518878-18518897 MsG0180001264.01.T01:three_prime_UTR 50.0%
CTTTGCCGGCCTCCTTATAT+AGG - Chr1:18518393-18518412 None:intergenic 50.0%
GCACCAGGAGTAAGGTTTGA+AGG - Chr1:18517413-18517432 None:intergenic 50.0%
GCCTGTTCGCTGCCTATATA+AGG + Chr1:18518378-18518397 MsG0180001264.01.T01:three_prime_UTR 50.0%
GCGCTATCCTAATGAGGAAG+GGG + Chr1:18517658-18517677 MsG0180001264.01.T01:CDS 50.0%
GGGTTGCAATAGTCGAAAGC+TGG - Chr1:18517096-18517115 None:intergenic 50.0%
GTTAACTGGGGAGATATCGG+TGG + Chr1:18517539-18517558 MsG0180001264.01.T01:CDS 50.0%
TAACCCCAAGATACGGCACT+AGG - Chr1:18518886-18518905 None:intergenic 50.0%
TCCTGGTGCATTGCAAGACA+AGG + Chr1:18517424-18517443 MsG0180001264.01.T01:CDS 50.0%
TCTGAGTGATCCTGGTACTC+TGG + Chr1:18518704-18518723 MsG0180001264.01.T01:three_prime_UTR 50.0%
TGACCTAAGTATGGGCCCAA+TGG - Chr1:18516770-18516789 None:intergenic 50.0%
TGAGCTGCTTAGAACCAGAG+AGG + Chr1:18518475-18518494 MsG0180001264.01.T01:three_prime_UTR 50.0%
TGTCCTAGTGCCGTATCTTG+GGG + Chr1:18518880-18518899 MsG0180001264.01.T01:three_prime_UTR 50.0%
! CTTCCTTGGTCTTTGCTCGT+TGG + Chr1:18516737-18516756 MsG0180001264.01.T01:intron 50.0%
! TCTGGCGTCTGGGATTGAAA+AGG + Chr1:18517137-18517156 MsG0180001264.01.T01:CDS 50.0%
!! AGGATTTGGGGCTCCTTTTC+TGG - Chr1:18516394-18516413 None:intergenic 50.0%
!! CGAATTGGTTTGTCGATGGC+TGG + Chr1:18517168-18517187 MsG0180001264.01.T01:intron 50.0%
!! CTCGTTGGTAGTGCACCATT+GGG + Chr1:18516752-18516771 MsG0180001264.01.T01:intron 50.0%
!!! GCATGGCTCACATTTTGGCT+TGG - Chr1:18518566-18518585 None:intergenic 50.0%
AGCCATGAGAAGCCGTACGA+AGG + Chr1:18517311-18517330 MsG0180001264.01.T01:intron 55.0%
AGGCCGGCAAAGTTAAGCCA+AGG + Chr1:18518401-18518420 MsG0180001264.01.T01:three_prime_UTR 55.0%
CAGTGCCATCAGGAACAGTG+AGG - Chr1:18517117-18517136 None:intergenic 55.0%
CGCTGCCTATATAAGGAGGC+CGG + Chr1:18518385-18518404 MsG0180001264.01.T01:three_prime_UTR 55.0%
CTGTTCCTGATGGCACTGTC+TGG + Chr1:18517119-18517138 MsG0180001264.01.T01:CDS 55.0%
GACTTGCAGCACTACCTCTC+TGG - Chr1:18518492-18518511 None:intergenic 55.0%
GCAACCCTCACTGTTCCTGA+TGG + Chr1:18517109-18517128 MsG0180001264.01.T01:CDS 55.0%
GCACCATTGGGCCCATACTT+AGG + Chr1:18516764-18516783 MsG0180001264.01.T01:intron 55.0%
GCATAGCAAGGCCCTTCGTA+CGG - Chr1:18517326-18517345 None:intergenic 55.0%
GCCATGAGAAGCCGTACGAA+GGG + Chr1:18517312-18517331 MsG0180001264.01.T01:intron 55.0%
!! GCTCGTTGGTAGTGCACCAT+TGG + Chr1:18516751-18516770 MsG0180001264.01.T01:intron 55.0%
!! TGACACGGTGCTGCAAGTGA+GGG - Chr1:18518601-18518620 None:intergenic 55.0%
AGACGCCAGACAGTGCCATC+AGG - Chr1:18517127-18517146 None:intergenic 60.0%
CACACGTGTCAGTGTAGCGG+CGG - Chr1:18517846-18517865 None:intergenic 60.0%
GATGGCACTGTCTGGCGTCT+GGG + Chr1:18517127-18517146 MsG0180001264.01.T01:CDS 60.0%
GCCCTTCGTACGGCTTCTCA+TGG - Chr1:18517316-18517335 None:intergenic 60.0%
TGATGGCACTGTCTGGCGTC+TGG + Chr1:18517126-18517145 MsG0180001264.01.T01:CDS 60.0%
TGTCAGTGTAGCGGCGGAGT+TGG - Chr1:18517840-18517859 None:intergenic 60.0%
!! CTGACACGGTGCTGCAAGTG+AGG - Chr1:18518602-18518621 None:intergenic 60.0%
CGCCGCTACACTGACACGTG+TGG + Chr1:18517844-18517863 MsG0180001264.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 18515102 18518992 18515102 ID=MsG0180001264.01;Name=MsG0180001264.01
Chr1 mRNA 18515102 18518992 18515102 ID=MsG0180001264.01.T01;Parent=MsG0180001264.01;Name=MsG0180001264.01.T01;_AED=0.46;_eAED=0.46;_QI=165|0.75|0.6|1|0.5|0.4|5|740|246
Chr1 exon 18515102 18515329 18515102 ID=MsG0180001264.01.T01:exon:6292;Parent=MsG0180001264.01.T01
Chr1 exon 18517058 18517158 18517058 ID=MsG0180001264.01.T01:exon:6293;Parent=MsG0180001264.01.T01
Chr1 exon 18517313 18517734 18517313 ID=MsG0180001264.01.T01:exon:6294;Parent=MsG0180001264.01.T01
Chr1 exon 18518008 18518205 18518008 ID=MsG0180001264.01.T01:exon:6295;Parent=MsG0180001264.01.T01
Chr1 exon 18518296 18518992 18518296 ID=MsG0180001264.01.T01:exon:6296;Parent=MsG0180001264.01.T01
Chr1 five_prime_UTR 18515102 18515266 18515102 ID=MsG0180001264.01.T01:five_prime_utr;Parent=MsG0180001264.01.T01
Chr1 CDS 18515267 18515329 18515267 ID=MsG0180001264.01.T01:cds;Parent=MsG0180001264.01.T01
Chr1 CDS 18517058 18517158 18517058 ID=MsG0180001264.01.T01:cds;Parent=MsG0180001264.01.T01
Chr1 CDS 18517313 18517734 18517313 ID=MsG0180001264.01.T01:cds;Parent=MsG0180001264.01.T01
Chr1 CDS 18518008 18518162 18518008 ID=MsG0180001264.01.T01:cds;Parent=MsG0180001264.01.T01
Chr1 three_prime_UTR 18518163 18518205 18518163 ID=MsG0180001264.01.T01:three_prime_utr;Parent=MsG0180001264.01.T01
Chr1 three_prime_UTR 18518296 18518992 18518296 ID=MsG0180001264.01.T01:three_prime_utr;Parent=MsG0180001264.01.T01
Gene Sequence

>MsG0180001264.01.T01

ATGCCTCCTCGTCCTTCTTTTCACAAGCTCATTCTCCCTTCATCCCTTCAAACTAGACAATTGAGGATTCCAGATAATTTTCTTAGGAAATATGGGGCCCAGCTTTCGACTATTGCAACCCTCACTGTTCCTGATGGCACTGTCTGGCGTCTGGGATTGAAAAGCCATGAGAAGCCGTACGAAGGGCCTTGCTATGCAAATTATCATCCTATTTTTGAAGACATTGAAGATATCGACTCCTTTGAATTCCTGGATTCATCACCTTCAAACCTTACTCCTGGTGCATTGCAAGACAAGGTTTTTAGTGGATCTTTGGATCAACTAACACCAGCGAAGAATCATACTCCATCATTGCAGAATTTGTTTAATGGGGGGTCTAAACTCAACCACGTTAACTGGGGAGATATCGGTGGTACTCTTTCTTCAAAGAGTGCCATTCAGTCAACCAGAGATATAGGTGTTCAGTTCAATGCTAATGAGTTTAAAAAGTCCACTGAAGGATTGAAATTGCGCTATCCTAATGAGGAAGGGGTTAATAATACTGATACGAAGAAAACTTCAAGAAAGAAGCGGAAATCAGATCCAAGTGCACTGGAAGCCACTGCTGAAAATGATGAGGAGGCAGAGCGCTATCGATTCTATGAAAGTGCGTCAGCAAGAAAAAGAACTGTAACAGCAGAAGAGAAAGAGAAAGGGCAATTAATGAGTCAAAGACTTTTGAACCAACCATCCATTCTGTAG

Protein sequence

>MsG0180001264.01.T01

MPPRPSFHKLILPSSLQTRQLRIPDNFLRKYGAQLSTIATLTVPDGTVWRLGLKSHEKPYEGPCYANYHPIFEDIEDIDSFEFLDSSPSNLTPGALQDKVFSGSLDQLTPAKNHTPSLQNLFNGGSKLNHVNWGDIGGTLSSKSAIQSTRDIGVQFNANEFKKSTEGLKLRYPNEEGVNNTDTKKTSRKKRKSDPSALEATAENDEEAERYRFYESASARKRTVTAEEKEKGQLMSQRLLNQPSIL*