AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001772.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001772.01.T01 MTR_1g042730 97.122 417 7 2 1 412 1 417 0.0 832
MsG0180001772.01.T01 MTR_8g088160 49.084 273 126 8 65 330 48 314 2.20e-80 251
MsG0180001772.01.T01 MTR_4g015040 88.679 53 6 0 177 229 21 73 4.75e-30 111
MsG0180001772.01.T01 MTR_7g114980 30.091 329 187 12 61 384 16 306 2.62e-27 111
MsG0180001772.01.T01 MTR_7g114980 31.023 303 166 12 61 358 16 280 3.87e-26 107
MsG0180001772.01.T01 MTR_1g047250 27.548 363 204 11 56 404 1 318 3.05e-25 105
MsG0180001772.01.T01 MTR_7g114990 27.844 334 182 12 61 384 18 302 8.46e-25 104
MsG0180001772.01.T01 MTR_7g021850 28.000 350 198 14 60 402 8 310 6.63e-24 102
MsG0180001772.01.T01 MTR_7g115010 27.954 347 187 12 61 403 14 301 3.02e-23 100
MsG0180001772.01.T01 MTR_7g114970 27.628 333 189 10 60 384 11 299 3.79e-22 97.1
MsG0180001772.01.T01 MTR_7g021680 27.429 350 199 14 60 402 8 309 1.49e-21 95.1
MsG0180001772.01.T01 MTR_7g021820 27.429 350 199 14 60 402 8 309 1.49e-21 95.1
MsG0180001772.01.T01 MTR_7g114970 28.013 307 169 10 60 358 11 273 2.75e-20 90.9
MsG0180001772.01.T01 MTR_7g114970 28.013 307 169 10 60 358 11 273 2.98e-20 90.5
MsG0180001772.01.T01 MTR_1g102750 26.126 333 194 14 60 384 9 297 2.50e-19 89.0
MsG0180001772.01.T01 MTR_1g102750 27.036 307 172 14 60 358 9 271 7.22e-19 87.0
MsG0180001772.01.T01 MTR_3g449790 24.925 333 197 10 60 379 39 331 3.27e-18 85.9
MsG0180001772.01.T01 MTR_3g092140 25.965 285 152 10 47 304 10 262 4.25e-17 83.6
MsG0180001772.01.T01 MTR_3g449790 24.625 333 192 10 60 379 39 325 1.66e-16 80.9
MsG0180001772.01.T01 MTR_7g114970 29.148 223 122 7 166 384 15 205 1.03e-15 76.6
MsG0180001772.01.T01 MTR_7g114970 27.556 225 123 7 60 280 11 199 2.66e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001772.01.T01 AT1G04420 73.449 403 100 2 17 412 10 412 0.0 625
MsG0180001772.01.T01 AT1G04690 29.217 332 197 8 56 383 1 298 1.48e-28 114
MsG0180001772.01.T01 AT1G60690 28.857 350 195 13 60 402 11 313 5.22e-24 102
MsG0180001772.01.T01 AT1G60710 28.940 349 196 14 60 402 11 313 1.18e-23 101
MsG0180001772.01.T01 AT1G60680 27.515 338 195 11 60 390 11 305 9.02e-23 99.0
MsG0180001772.01.T01 AT1G10810 27.507 349 201 12 60 402 11 313 5.04e-21 94.0
MsG0180001772.01.T01 AT1G60750 28.000 350 182 13 60 402 12 298 1.50e-20 92.4
MsG0180001772.01.T01 AT1G60730 27.429 350 200 14 60 402 11 313 3.00e-20 91.7
MsG0180001772.01.T01 AT1G60730 27.479 353 216 14 60 402 11 333 8.80e-20 90.5
MsG0180001772.01.T01 AT5G53580 26.361 349 188 15 55 384 36 334 8.82e-18 84.7
MsG0180001772.01.T01 AT1G10810 28.854 253 135 10 60 306 11 224 4.77e-17 80.9
MsG0180001772.01.T01 AT1G60680 28.049 246 135 9 60 301 11 218 6.89e-16 77.4
MsG0180001772.01.T01 AT1G10810 27.076 277 161 9 128 402 24 261 1.23e-15 77.4
MsG0180001772.01.T01 AT4G33670 24.791 359 211 13 56 408 4 309 6.30e-13 69.7

Find 99 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAAGGTATAGTCTTTAA+AGG 0.245194 1:-26691027 None:intergenic
CCTTGCGTCTCTTTCTTCAT+TGG 0.260368 1:-26688322 None:intergenic
GGTCAGAGTCACCAAGTTTC+CGG 0.262736 1:-26686848 None:intergenic
CGTTATGCGGCCGTACAAAC+TGG 0.271337 1:+26691122 MsG0180001772.01.T01:three_prime_UTR
CAAGCAAGCTATAGCTGTTC+TGG 0.272185 1:-26689543 None:intergenic
TTCTGGATACTGACAATCTT+TGG 0.280723 1:-26689526 None:intergenic
AAGCCAATGTTGCAATTCTT+TGG 0.310094 1:-26690377 None:intergenic
GATCGCTACGTTGCATTGTT+TGG 0.310293 1:+26688963 MsG0180001772.01.T01:CDS
GTCTCTTTCTTCATTGGAAT+CGG 0.313776 1:-26688316 None:intergenic
GAGTGATTTCACTGATATTA+AGG 0.318627 1:-26686869 None:intergenic
CAATGTTTCAGATGACGTTT+GGG 0.328708 1:+26687899 MsG0180001772.01.T01:intron
ATTCCTATGATCCTTCAAAA+TGG 0.338544 1:+26688991 MsG0180001772.01.T01:CDS
AGGAGTTAGACCATGTTTCT+TGG 0.357872 1:-26690822 None:intergenic
AATCCAAGCGCGAGCTGAAC+AGG 0.376331 1:-26690842 None:intergenic
TTCTTACCCGTGAAAGTGAT+TGG 0.390126 1:-26690517 None:intergenic
TGTGAGAGATCGTCCATTCA+TGG 0.397619 1:+26690865 MsG0180001772.01.T01:CDS
CTCAATTATGCATTTGAGAA+TGG 0.398022 1:+26687955 MsG0180001772.01.T01:CDS
GCAATGTTTCAGATGACGTT+TGG 0.403265 1:+26687898 MsG0180001772.01.T01:intron
TTTCAAGAACTTATCAATGA+AGG 0.411788 1:+26689050 MsG0180001772.01.T01:CDS
TGAGAGATCGAGTTACTTAC+GGG 0.414574 1:+26688593 MsG0180001772.01.T01:CDS
TTGATTTGTTGCAGATTCAT+TGG 0.416629 1:+26688700 MsG0180001772.01.T01:CDS
CTAGGCGGCGGAACACTCTC+TGG 0.422546 1:+26690416 MsG0180001772.01.T01:CDS
CTGAGAGATCGAGTTACTTA+CGG 0.423724 1:+26688592 MsG0180001772.01.T01:CDS
ATAATTGAACTCGCCATGAA+TGG 0.430321 1:-26690878 None:intergenic
CCATTGCAATACCGGAAACT+TGG 0.437127 1:+26686837 MsG0180001772.01.T01:CDS
ACTCCTGTTCAGCTCGCGCT+TGG 0.440067 1:+26690839 MsG0180001772.01.T01:CDS
AGAAAAGCCTTAAGCGTCTT+GGG 0.443249 1:+26688667 MsG0180001772.01.T01:CDS
TCAACAATCCATTGCAATAC+CGG 0.444341 1:+26686829 MsG0180001772.01.T01:CDS
TTCATGGCGAGTTCAATTAT+CGG 0.446341 1:+26690881 MsG0180001772.01.T01:CDS
ATCATAGCAACAAAAGTTTG+CGG 0.453007 1:+26688564 MsG0180001772.01.T01:CDS
TCTCTTTCTTCATTGGAATC+GGG 0.453136 1:-26688315 None:intergenic
CATCCAAAGAATTGCAACAT+TGG 0.453546 1:+26690374 MsG0180001772.01.T01:CDS
CAATGTTGCAATTCTTTGGA+TGG 0.454759 1:-26690373 None:intergenic
ATTCCTGTCATGACTTCTGC+TGG 0.463780 1:-26690968 None:intergenic
GAATCTCTTCCCTGGCTACA+TGG 0.467731 1:+26690484 MsG0180001772.01.T01:CDS
GATATAACCAATCACTTTCA+CGG 0.468306 1:+26690510 MsG0180001772.01.T01:CDS
GTTTCAAATGAGACTTCATA+TGG 0.472814 1:+26689463 MsG0180001772.01.T01:CDS
AACAATGCAACGTAGCGATC+TGG 0.476923 1:-26688960 None:intergenic
GTCCATGCAGCTAAAGTTGA+GGG 0.478100 1:+26689499 MsG0180001772.01.T01:CDS
TTATATCTTTCCATGTAGCC+AGG 0.480910 1:-26690494 None:intergenic
AATCAGTCCCAAGACGCTTA+AGG 0.481062 1:-26688674 None:intergenic
GTATTGCAATGGATTGTTGA+TGG 0.486435 1:-26686826 None:intergenic
AGAGTGTTCCGCCGCCTAGT+GGG 0.496927 1:-26690412 None:intergenic
TATTCAATACCCAGTTTGTA+CGG 0.498226 1:-26691132 None:intergenic
GAGAAAAGCCTTAAGCGTCT+TGG 0.499990 1:+26688666 MsG0180001772.01.T01:CDS
CTGATCTCTATATAGCTAGC+TGG 0.502112 1:+26688350 MsG0180001772.01.T01:CDS
AATATCAGTGAAATCACTCT+TGG 0.502115 1:+26686873 MsG0180001772.01.T01:CDS
TGTTCAACAAACGGCACACT+AGG 0.508236 1:-26689017 None:intergenic
CCAAGTTTCCGGTATTGCAA+TGG 0.509251 1:-26686837 None:intergenic
GTCATGACTTCTGCTGGTAA+AGG 0.518717 1:-26690962 None:intergenic
TCCGCCGCCTAGTGGGGAAT+AGG 0.518898 1:-26690405 None:intergenic
TATAGTCTTTAAAGGATGCT+AGG 0.527210 1:-26691019 None:intergenic
ATATTCTTATATCAGTTCCA+TGG 0.527633 1:+26691059 MsG0180001772.01.T01:three_prime_UTR
CATTGACAAATAACTCAACA+TGG 0.528289 1:-26691157 None:intergenic
AACTATTAAGTATCTTGAGT+TGG 0.528848 1:+26690799 MsG0180001772.01.T01:CDS
GAGAGTGTTCCGCCGCCTAG+TGG 0.531448 1:-26690413 None:intergenic
GTTATGCGGCCGTACAAACT+GGG 0.534500 1:+26691123 MsG0180001772.01.T01:three_prime_UTR
GCTTGCAACTGTTCAACAAA+CGG 0.537666 1:-26689026 None:intergenic
GTCCCTCAACTTTAGCTGCA+TGG 0.544863 1:-26689501 None:intergenic
TCCTATTCCCCACTAGGCGG+CGG 0.552022 1:+26690404 MsG0180001772.01.T01:CDS
AGCTGCTAAGAAGCCATGGC+CGG 0.553641 1:+26686660 MsG0180001772.01.T01:exon
ATATAACCAATCACTTTCAC+GGG 0.562310 1:+26690511 MsG0180001772.01.T01:CDS
AGAACTTATCAATGAAGGAA+AGG 0.566138 1:+26689055 MsG0180001772.01.T01:CDS
TTGCTATCCTATTCCCCACT+AGG 0.566323 1:+26690398 MsG0180001772.01.T01:CDS
CTTGAGTTGGCCAAGAAACA+TGG 0.566480 1:+26690812 MsG0180001772.01.T01:CDS
GGAAGACTGAATCTCTTCCC+TGG 0.567807 1:+26690476 MsG0180001772.01.T01:CDS
ATGCATCAGGTACGTTACAT+AGG 0.569919 1:+26689439 MsG0180001772.01.T01:intron
ATTCAATACGTATCTATCCA+TGG 0.572770 1:-26691076 None:intergenic
TGGTGTGAGAGAATGAGAAA+TGG 0.573879 1:-26686712 None:intergenic
TGAGACTTCATATGGAGTGA+TGG 0.573984 1:+26689471 MsG0180001772.01.T01:CDS
TGTCCATGCAGCTAAAGTTG+AGG 0.581678 1:+26689498 MsG0180001772.01.T01:CDS
TATATCTTTCCATGTAGCCA+GGG 0.587281 1:-26690493 None:intergenic
GAAAGAGCAGACACCGGCCA+TGG 0.588039 1:-26686673 None:intergenic
GTAAAAGAAGATGCATTCTG+AGG 0.588784 1:+26686769 MsG0180001772.01.T01:CDS
GATGTGCACGAGTGTGGTGT+TGG 0.599619 1:+26686560 MsG0180001772.01.T01:five_prime_UTR
AATTATCGGTGCAACATCTG+TGG 0.606607 1:+26690895 MsG0180001772.01.T01:CDS
GATAAGCTGCTAAGAAGCCA+TGG 0.609538 1:+26686656 MsG0180001772.01.T01:exon
TTACCAGCAGAAGTCATGAC+AGG 0.613222 1:+26690965 MsG0180001772.01.T01:CDS
GAGTGTTCCGCCGCCTAGTG+GGG 0.617674 1:-26690411 None:intergenic
GACGTTTGGGGAGCAAAACA+CGG 0.625843 1:+26687912 MsG0180001772.01.T01:CDS
GGCAAATATCAAAGAAAGTG+TGG 0.631997 1:+26688644 MsG0180001772.01.T01:CDS
CCTATGATCCTTCAAAATGG+AGG 0.632626 1:+26688994 MsG0180001772.01.T01:CDS
AAAGAAGATGCATTCTGAGG+AGG 0.636463 1:+26686772 MsG0180001772.01.T01:CDS
AGAAATGGCAACAACGTCGG+AGG 0.648860 1:-26686697 None:intergenic
TTGATGGCGGCACAAACAAG+AGG 0.649025 1:-26686810 None:intergenic
ATTGACAAATAACTCAACAT+GGG 0.663910 1:-26691156 None:intergenic
GAAATCTCAATCTCGTGACA+AGG 0.665936 1:+26688375 MsG0180001772.01.T01:CDS
ATGAGAAATGGCAACAACGT+CGG 0.668018 1:-26686700 None:intergenic
GGAGGAGAAAGAGCAGACAC+CGG 0.670007 1:-26686679 None:intergenic
CCAATGAAGAAAGAGACGCA+AGG 0.676962 1:+26688322 MsG0180001772.01.T01:CDS
AACAACGTGTTTGTATTGTG+TGG 0.687492 1:+26686625 MsG0180001772.01.T01:five_prime_UTR
TAATGCTCTTGATACTGCTG+AGG 0.693085 1:+26687981 MsG0180001772.01.T01:CDS
TTGCAATGGATTGTTGATGG+CGG 0.699878 1:-26686823 None:intergenic
TGAGGAGGACGAGAACTGTG+AGG 0.701626 1:+26686787 MsG0180001772.01.T01:CDS
AATGTTTCAGATGACGTTTG+GGG 0.703795 1:+26687900 MsG0180001772.01.T01:intron
CTGTCTATAACAATAAACAG+AGG 0.736786 1:+26686592 MsG0180001772.01.T01:five_prime_UTR
GTACTTACGAAAACGTTATG+CGG 0.742006 1:+26691109 MsG0180001772.01.T01:three_prime_UTR
CTATCCTATTCCCCACTAGG+CGG 0.752007 1:+26690401 MsG0180001772.01.T01:CDS
GTATTGTTGAGAGACAGTGA+TGG 0.782107 1:-26686732 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATAAATGAAGAAAA+TGG - Chr1:26687707-26687726 None:intergenic 10.0%
!!! CAAATTTTCAAAAAAATAAA+AGG + Chr1:26687511-26687530 MsG0180001772.01.T01:intron 10.0%
!!! TTATTTAAAGTTGTTATTAA+GGG + Chr1:26687724-26687743 MsG0180001772.01.T01:intron 10.0%
!!! TTTATTTAAAGTTGTTATTA+AGG + Chr1:26687723-26687742 MsG0180001772.01.T01:intron 10.0%
!! AAACAAAAAAGAATAATAAG+AGG - Chr1:26686936-26686955 None:intergenic 15.0%
!! AACCTATACATTTATATAAA+AGG - Chr1:26687787-26687806 None:intergenic 15.0%
!! AAGTTAATGTAAAAATTAGA+AGG + Chr1:26687612-26687631 MsG0180001772.01.T01:intron 15.0%
!! AATAAAGGAAAATTCTTAAT+TGG - Chr1:26690754-26690773 None:intergenic 15.0%
!! ACCTATACATTTATATAAAA+GGG - Chr1:26687786-26687805 None:intergenic 15.0%
!! TAAAATTCAAGTATTTGAAT+TGG + Chr1:26688078-26688097 MsG0180001772.01.T01:intron 15.0%
!!! AATGTATTACTTTTAAAACT+TGG - Chr1:26689741-26689760 None:intergenic 15.0%
!!! AATGTGATTTTTATTGTATT+AGG + Chr1:26688838-26688857 MsG0180001772.01.T01:intron 15.0%
!!! ATGTATTACTTTTAAAACTT+GGG - Chr1:26689740-26689759 None:intergenic 15.0%
!!! TATTTTTGCAAATTTCTTAA+TGG - Chr1:26690250-26690269 None:intergenic 15.0%
!! AACCAAACATGAAAAAATAA+AGG - Chr1:26690769-26690788 None:intergenic 20.0%
!! TAACTATTACTATAGATTGA+AGG - Chr1:26689234-26689253 None:intergenic 20.0%
!! TATGATGCTTATTACTTTAT+TGG + Chr1:26688748-26688767 MsG0180001772.01.T01:intron 20.0%
!!! TCCCTTTTATATAAATGTAT+AGG + Chr1:26687782-26687801 MsG0180001772.01.T01:intron 20.0%
!!! TGTATTACTTTTAAAACTTG+GGG - Chr1:26689739-26689758 None:intergenic 20.0%
!!! TTCCTTTATTTTTTCATGTT+TGG + Chr1:26690764-26690783 MsG0180001772.01.T01:intron 20.0%
! AAACAGACTAATAATCATGA+TGG - Chr1:26688166-26688185 None:intergenic 25.0%
! AACACAAATCATATACTGTA+AGG - Chr1:26689678-26689697 None:intergenic 25.0%
! AACCATACACTAAAAGTTTA+CGG - Chr1:26690114-26690133 None:intergenic 25.0%
! AACTATTAAGTATCTTGAGT+TGG + Chr1:26690799-26690818 MsG0180001772.01.T01:CDS 25.0%
! ACAAATGATTACAGATAACA+TGG + Chr1:26689868-26689887 MsG0180001772.01.T01:intron 25.0%
! ATATTCTTATATCAGTTCCA+TGG + Chr1:26691059-26691078 MsG0180001772.01.T01:three_prime_UTR 25.0%
! ATTGACAAATAACTCAACAT+GGG - Chr1:26691159-26691178 None:intergenic 25.0%
! TAGAAAAGATAAAGCATGTT+AGG - Chr1:26689090-26689109 None:intergenic 25.0%
! TAGAGAGTCCAAATTAAAAA+AGG + Chr1:26689769-26689788 MsG0180001772.01.T01:intron 25.0%
! TGAACATAAGTTTATAAGTG+CGG - Chr1:26687542-26687561 None:intergenic 25.0%
! TTATAATAACCAAACTGAAC+TGG - Chr1:26690689-26690708 None:intergenic 25.0%
! TTTCAAGAACTTATCAATGA+AGG + Chr1:26689050-26689069 MsG0180001772.01.T01:CDS 25.0%
!! ACTATACCTTTGAATTTTTC+GGG + Chr1:26691036-26691055 MsG0180001772.01.T01:three_prime_UTR 25.0%
!! ATCACTTAATTTTGTATTGC+TGG + Chr1:26689628-26689647 MsG0180001772.01.T01:intron 25.0%
!! GACTATACCTTTGAATTTTT+CGG + Chr1:26691035-26691054 MsG0180001772.01.T01:three_prime_UTR 25.0%
!! TGATTTTCTGCTTTCATTAT+AGG + Chr1:26688937-26688956 MsG0180001772.01.T01:intron 25.0%
!! TTCAAAGGTATAGTCTTTAA+AGG - Chr1:26691030-26691049 None:intergenic 25.0%
!!! TAATTCGGTTTTGAAAAAGA+CGG - Chr1:26690574-26690593 None:intergenic 25.0%
!!! TTTTTTAATTTGGACTCTCT+AGG - Chr1:26689770-26689789 None:intergenic 25.0%
!!! TTTTTTCATGTTTGGTTTTC+AGG + Chr1:26690772-26690791 MsG0180001772.01.T01:intron 25.0%
AAAGTGACTTGAAAGTAAAG+TGG + Chr1:26687078-26687097 MsG0180001772.01.T01:intron 30.0%
AATATCAGTGAAATCACTCT+TGG + Chr1:26686873-26686892 MsG0180001772.01.T01:CDS 30.0%
AGAACTTATCAATGAAGGAA+AGG + Chr1:26689055-26689074 MsG0180001772.01.T01:CDS 30.0%
AGATAAAGCATGTTAGGAAT+AGG - Chr1:26689084-26689103 None:intergenic 30.0%
AGTTTATGCTAATTGATGTG+TGG - Chr1:26689369-26689388 None:intergenic 30.0%
ATATAACCAATCACTTTCAC+GGG + Chr1:26690511-26690530 MsG0180001772.01.T01:CDS 30.0%
ATCATAGCAACAAAAGTTTG+CGG + Chr1:26688564-26688583 MsG0180001772.01.T01:CDS 30.0%
ATGATAATCTATGCACAAAG+AGG - Chr1:26688549-26688568 None:intergenic 30.0%
ATTCAATACGTATCTATCCA+TGG - Chr1:26691079-26691098 None:intergenic 30.0%
ATTCCTATGATCCTTCAAAA+TGG + Chr1:26688991-26689010 MsG0180001772.01.T01:CDS 30.0%
ATTGGTTATCTTGTTAACCA+TGG - Chr1:26690736-26690755 None:intergenic 30.0%
CAGTTTGGTTATTATAACAC+TGG + Chr1:26690692-26690711 MsG0180001772.01.T01:intron 30.0%
CATTGACAAATAACTCAACA+TGG - Chr1:26691160-26691179 None:intergenic 30.0%
CCAATTTATCCTTCAAACAT+GGG + Chr1:26690036-26690055 MsG0180001772.01.T01:intron 30.0%
CTCAATTATGCATTTGAGAA+TGG + Chr1:26687955-26687974 MsG0180001772.01.T01:CDS 30.0%
CTGTCTATAACAATAAACAG+AGG + Chr1:26686592-26686611 MsG0180001772.01.T01:five_prime_UTR 30.0%
GAATATCCCGAAAAATTCAA+AGG - Chr1:26691045-26691064 None:intergenic 30.0%
GAGTGATTTCACTGATATTA+AGG - Chr1:26686872-26686891 None:intergenic 30.0%
GATATAACCAATCACTTTCA+CGG + Chr1:26690510-26690529 MsG0180001772.01.T01:CDS 30.0%
GATCATATTCATATGCACTT+TGG + Chr1:26690058-26690077 MsG0180001772.01.T01:intron 30.0%
GATGCTTATTACTTTATTGG+TGG + Chr1:26688751-26688770 MsG0180001772.01.T01:intron 30.0%
GATTACAGATAACATGGTTT+AGG + Chr1:26689874-26689893 MsG0180001772.01.T01:intron 30.0%
GCACTTATAAACTTATGTTC+AGG + Chr1:26687541-26687560 MsG0180001772.01.T01:intron 30.0%
GTATCAACCTTAAAAAAACC+CGG + Chr1:26687297-26687316 MsG0180001772.01.T01:intron 30.0%
GTTTCAAATGAGACTTCATA+TGG + Chr1:26689463-26689482 MsG0180001772.01.T01:CDS 30.0%
TAAAAGTTTACGGATCACAT+TGG - Chr1:26690104-26690123 None:intergenic 30.0%
TATTCAATACCCAGTTTGTA+CGG - Chr1:26691135-26691154 None:intergenic 30.0%
TCAAAGACTTATGAATCACA+AGG - Chr1:26689326-26689345 None:intergenic 30.0%
TCCAATTTATCCTTCAAACA+TGG + Chr1:26690035-26690054 MsG0180001772.01.T01:intron 30.0%
TCTCACAATCAGCAATTTAT+AGG + Chr1:26689973-26689992 MsG0180001772.01.T01:intron 30.0%
TGATAATCTATGCACAAAGA+GGG - Chr1:26688548-26688567 None:intergenic 30.0%
TTATTTGAGCAGTTCAATTG+CGG - Chr1:26690657-26690676 None:intergenic 30.0%
TTCAATGACTTTAAACCACT+CGG + Chr1:26690625-26690644 MsG0180001772.01.T01:intron 30.0%
! AAAGTAAAGTGGTTTGTGTT+TGG + Chr1:26687089-26687108 MsG0180001772.01.T01:intron 30.0%
! AAGTAAAGTGGTTTGTGTTT+GGG + Chr1:26687090-26687109 MsG0180001772.01.T01:intron 30.0%
! ATCCGTAAACTTTTAGTGTA+TGG + Chr1:26690109-26690128 MsG0180001772.01.T01:intron 30.0%
! ATGCTTTTACAACAACTGAA+CGG + Chr1:26690939-26690958 MsG0180001772.01.T01:CDS 30.0%
! CATCAATGTCTTCTTTTAGT+TGG - Chr1:26690922-26690941 None:intergenic 30.0%
! TATAGTCTTTAAAGGATGCT+AGG - Chr1:26691022-26691041 None:intergenic 30.0%
! TTTGTAATTTTGCATGCATC+AGG + Chr1:26689426-26689445 MsG0180001772.01.T01:intron 30.0%
!! AATTCTAAAGCTGCAAAAAG+TGG + Chr1:26690455-26690474 MsG0180001772.01.T01:CDS 30.0%
!! AGTTTTGCTTTGACTTCAAT+TGG + Chr1:26687432-26687451 MsG0180001772.01.T01:intron 30.0%
!! TTGATTTGTTGCAGATTCAT+TGG + Chr1:26688700-26688719 MsG0180001772.01.T01:CDS 30.0%
!!! ACTTTCAAGTCACTTTTACT+CGG - Chr1:26687074-26687093 None:intergenic 30.0%
!!! CAGGAAAGCCTTTTTTAATT+TGG - Chr1:26689780-26689799 None:intergenic 30.0%
!!! TTGGACGTTTTTGAAGTTTA+AGG - Chr1:26690085-26690104 None:intergenic 30.0%
AACAACGTGTTTGTATTGTG+TGG + Chr1:26686625-26686644 MsG0180001772.01.T01:five_prime_UTR 35.0%
AAGCCAATGTTGCAATTCTT+TGG - Chr1:26690380-26690399 None:intergenic 35.0%
AATAACCAAACTGAACTGGA+TGG - Chr1:26690685-26690704 None:intergenic 35.0%
AATGTTTCAGATGACGTTTG+GGG + Chr1:26687900-26687919 MsG0180001772.01.T01:intron 35.0%
AGCTTCTTCATGTTCTTAGT+TGG + Chr1:26690315-26690334 MsG0180001772.01.T01:intron 35.0%
AGGTCAATCTCATTCAATGT+GGG + Chr1:26687561-26687580 MsG0180001772.01.T01:intron 35.0%
ATAATTGAACTCGCCATGAA+TGG - Chr1:26690881-26690900 None:intergenic 35.0%
CAATCCAAGAACCAACTAAT+CGG - Chr1:26687486-26687505 None:intergenic 35.0%
CAATGTTGCAATTCTTTGGA+TGG - Chr1:26690376-26690395 None:intergenic 35.0%
CAATGTTTCAGATGACGTTT+GGG + Chr1:26687899-26687918 MsG0180001772.01.T01:intron 35.0%
CATCCAAAGAATTGCAACAT+TGG + Chr1:26690374-26690393 MsG0180001772.01.T01:CDS 35.0%
CCAAGTATTCAAAGATCTAC+AGG - Chr1:26689799-26689818 None:intergenic 35.0%
CCCATGTTTGAAGGATAAAT+TGG - Chr1:26690039-26690058 None:intergenic 35.0%
CCTGTAGATCTTTGAATACT+TGG + Chr1:26689796-26689815 MsG0180001772.01.T01:intron 35.0%
GAATATGATCCCATGTTTGA+AGG - Chr1:26690048-26690067 None:intergenic 35.0%
GGCAAATATCAAAGAAAGTG+TGG + Chr1:26688644-26688663 MsG0180001772.01.T01:CDS 35.0%
GTAAAAGAAGATGCATTCTG+AGG + Chr1:26686769-26686788 MsG0180001772.01.T01:CDS 35.0%
GTACAAGTGTGAAAATGAGA+TGG - Chr1:26688046-26688065 None:intergenic 35.0%
GTACTTACGAAAACGTTATG+CGG + Chr1:26691109-26691128 MsG0180001772.01.T01:three_prime_UTR 35.0%
GTATTAGTTGTTCAGGAGTT+TGG + Chr1:26688397-26688416 MsG0180001772.01.T01:intron 35.0%
GTCTCTTTCTTCATTGGAAT+CGG - Chr1:26688319-26688338 None:intergenic 35.0%
GTGAAAATGAGATGGAATGA+AGG - Chr1:26688038-26688057 None:intergenic 35.0%
GTTCAAAAACAAGTTTAGCC+TGG - Chr1:26688893-26688912 None:intergenic 35.0%
TATATCTTTCCATGTAGCCA+GGG - Chr1:26690496-26690515 None:intergenic 35.0%
TCAACAATCCATTGCAATAC+CGG + Chr1:26686829-26686848 MsG0180001772.01.T01:CDS 35.0%
TCACATACACATGTACAAGA+AGG - Chr1:26689397-26689416 None:intergenic 35.0%
TCACCAAACACAGAAATTGT+TGG - Chr1:26687402-26687421 None:intergenic 35.0%
TCATATACTGTAAGGACAAC+AGG - Chr1:26689670-26689689 None:intergenic 35.0%
TCTCTTTCTTCATTGGAATC+GGG - Chr1:26688318-26688337 None:intergenic 35.0%
TTATATCTTTCCATGTAGCC+AGG - Chr1:26690497-26690516 None:intergenic 35.0%
TTCATGGCGAGTTCAATTAT+CGG + Chr1:26690881-26690900 MsG0180001772.01.T01:CDS 35.0%
TTCTGGATACTGACAATCTT+TGG - Chr1:26689529-26689548 None:intergenic 35.0%
! AGAAATAGTGATGATGAACC+AGG + Chr1:26688872-26688891 MsG0180001772.01.T01:intron 35.0%
! AGCAAATACAAAGTACTCCT+CGG - Chr1:26689162-26689181 None:intergenic 35.0%
! GTAAGTACAGTTCTTTTCTG+AGG + Chr1:26689584-26689603 MsG0180001772.01.T01:intron 35.0%
! GTAGCATGTTGTTGATTGAT+TGG + Chr1:26687874-26687893 MsG0180001772.01.T01:intron 35.0%
! GTTAACCATGGTTTAGAGTA+TGG - Chr1:26690724-26690743 None:intergenic 35.0%
! TAAATCTCAGTCTAGCTTCA+GGG - Chr1:26688450-26688469 None:intergenic 35.0%
! TGACAAGGTATTAGTTGTTC+AGG + Chr1:26688390-26688409 MsG0180001772.01.T01:intron 35.0%
! TTTGAAACTTGAGTCAAGCA+TGG + Chr1:26688805-26688824 MsG0180001772.01.T01:intron 35.0%
!! ATGTTTTGTTCCACTTCTAG+AGG - Chr1:26687276-26687295 None:intergenic 35.0%
!! GTATTGCAATGGATTGTTGA+TGG - Chr1:26686829-26686848 None:intergenic 35.0%
!! TGTTTTGTTCCACTTCTAGA+GGG - Chr1:26687275-26687294 None:intergenic 35.0%
!! TTCATGCATGTTTTGTTCTG+CGG + Chr1:26687018-26687037 MsG0180001772.01.T01:intron 35.0%
!!! TGCACCTTTGGAATCAATTT+TGG + Chr1:26687248-26687267 MsG0180001772.01.T01:intron 35.0%
!!! TTTAGGATTTTAGTTGCCAG+AGG + Chr1:26689891-26689910 MsG0180001772.01.T01:intron 35.0%
AATTATCGGTGCAACATCTG+TGG + Chr1:26690895-26690914 MsG0180001772.01.T01:CDS 40.0%
AATTTACCCCACTCCAAGTT+AGG - Chr1:26690218-26690237 None:intergenic 40.0%
AGAAAAGCCTTAAGCGTCTT+GGG + Chr1:26688667-26688686 MsG0180001772.01.T01:CDS 40.0%
AGATTGCAAGAGTTGTGTGT+AGG - Chr1:26688225-26688244 None:intergenic 40.0%
AGGAGTTAGACCATGTTTCT+TGG - Chr1:26690825-26690844 None:intergenic 40.0%
AGTTGTGTGTAGGGATAACT+TGG - Chr1:26688215-26688234 None:intergenic 40.0%
ATGAGAAATGGCAACAACGT+CGG - Chr1:26686703-26686722 None:intergenic 40.0%
ATGCATCAGGTACGTTACAT+AGG + Chr1:26689439-26689458 MsG0180001772.01.T01:intron 40.0%
ATTTACCCCACTCCAAGTTA+GGG - Chr1:26690217-26690236 None:intergenic 40.0%
CAGGTCAATCTCATTCAATG+TGG + Chr1:26687560-26687579 MsG0180001772.01.T01:intron 40.0%
CCTATGATCCTTCAAAATGG+AGG + Chr1:26688994-26689013 MsG0180001772.01.T01:CDS 40.0%
CGTAATCAATTCTGCACCTT+TGG + Chr1:26687236-26687255 MsG0180001772.01.T01:intron 40.0%
CTAAAGAGTAGCATACTCCT+AGG - Chr1:26687354-26687373 None:intergenic 40.0%
CTGAGAGATCGAGTTACTTA+CGG + Chr1:26688592-26688611 MsG0180001772.01.T01:CDS 40.0%
CTGATCTCTATATAGCTAGC+TGG + Chr1:26688350-26688369 MsG0180001772.01.T01:CDS 40.0%
GAAATCTCAATCTCGTGACA+AGG + Chr1:26688375-26688394 MsG0180001772.01.T01:CDS 40.0%
GATTGCAAGAGTTGTGTGTA+GGG - Chr1:26688224-26688243 None:intergenic 40.0%
GCAATGTTTCAGATGACGTT+TGG + Chr1:26687898-26687917 MsG0180001772.01.T01:intron 40.0%
GCTAAAAATTCCCCAAAAGC+AGG - Chr1:26690009-26690028 None:intergenic 40.0%
GCTTGCAACTGTTCAACAAA+CGG - Chr1:26689029-26689048 None:intergenic 40.0%
GGTCAATCTCATTCAATGTG+GGG + Chr1:26687562-26687581 MsG0180001772.01.T01:intron 40.0%
GTATTGTTGAGAGACAGTGA+TGG - Chr1:26686735-26686754 None:intergenic 40.0%
GTGCCAACAATTTCTGTGTT+TGG + Chr1:26687396-26687415 MsG0180001772.01.T01:intron 40.0%
TAATGCTCTTGATACTGCTG+AGG + Chr1:26687981-26688000 MsG0180001772.01.T01:CDS 40.0%
TCAGACCATACTCTAAACCA+TGG + Chr1:26690716-26690735 MsG0180001772.01.T01:intron 40.0%
TGAGACTTCATATGGAGTGA+TGG + Chr1:26689471-26689490 MsG0180001772.01.T01:CDS 40.0%
TGAGAGATCGAGTTACTTAC+GGG + Chr1:26688593-26688612 MsG0180001772.01.T01:CDS 40.0%
TGCTGGTACGATGTCTAATT+CGG - Chr1:26690589-26690608 None:intergenic 40.0%
TGGTGTGAGAGAATGAGAAA+TGG - Chr1:26686715-26686734 None:intergenic 40.0%
TTCTTACCCGTGAAAGTGAT+TGG - Chr1:26690520-26690539 None:intergenic 40.0%
TTGAAGGTGGCAAGAGAAAT+AGG + Chr1:26689921-26689940 MsG0180001772.01.T01:intron 40.0%
! AAAGAAGATGCATTCTGAGG+AGG + Chr1:26686772-26686791 MsG0180001772.01.T01:CDS 40.0%
! CTAAATCTCAGTCTAGCTTC+AGG - Chr1:26688451-26688470 None:intergenic 40.0%
! CTAGGAGTATGCTACTCTTT+AGG + Chr1:26687352-26687371 MsG0180001772.01.T01:intron 40.0%
!! AGTACAGTTCTTTTCTGAGG+TGG + Chr1:26689587-26689606 MsG0180001772.01.T01:intron 40.0%
!! CATACATTCTCCTGCTTTTG+GGG + Chr1:26689996-26690015 MsG0180001772.01.T01:intron 40.0%
!! CCTCCATTTTGAAGGATCAT+AGG - Chr1:26688997-26689016 None:intergenic 40.0%
!! CTTGTGAGAAGTCGTTTTGA+AGG + Chr1:26689562-26689581 MsG0180001772.01.T01:CDS 40.0%
!! GCATACATTCTCCTGCTTTT+GGG + Chr1:26689995-26690014 MsG0180001772.01.T01:intron 40.0%
!! GTTTTGTTCCACTTCTAGAG+GGG - Chr1:26687274-26687293 None:intergenic 40.0%
!! TGTTTTTGCAGTTGATCTCG+TGG + Chr1:26690343-26690362 MsG0180001772.01.T01:intron 40.0%
!! TTGCAATGGATTGTTGATGG+CGG - Chr1:26686826-26686845 None:intergenic 40.0%
!!! TTACAGGCCGGGTTTTTTTA+AGG - Chr1:26687307-26687326 None:intergenic 40.0%
AAAAACGATGTGCACGAGTG+TGG + Chr1:26686554-26686573 MsG0180001772.01.T01:five_prime_UTR 45.0%
AACAATGCAACGTAGCGATC+TGG - Chr1:26688963-26688982 None:intergenic 45.0%
AACTTCACACCCGCTAACTT+AGG - Chr1:26690292-26690311 None:intergenic 45.0%
AATCAGTCCCAAGACGCTTA+AGG - Chr1:26688677-26688696 None:intergenic 45.0%
ACACAGAAATTGTTGGCACC+TGG - Chr1:26687395-26687414 None:intergenic 45.0%
ACAGAAATTGTTGGCACCTG+GGG - Chr1:26687393-26687412 None:intergenic 45.0%
ACTCCAAGTTAGGGTTCAAC+TGG - Chr1:26690208-26690227 None:intergenic 45.0%
ACTTCACACCCGCTAACTTA+GGG - Chr1:26690291-26690310 None:intergenic 45.0%
AGTCCAGTTGAACCCTAACT+TGG + Chr1:26690202-26690221 MsG0180001772.01.T01:intron 45.0%
AGTTGAACCCTAACTTGGAG+TGG + Chr1:26690207-26690226 MsG0180001772.01.T01:intron 45.0%
ATCGTACCAGCATGACTTCT+GGG + Chr1:26690597-26690616 MsG0180001772.01.T01:intron 45.0%
ATTCCTGTCATGACTTCTGC+TGG - Chr1:26690971-26690990 None:intergenic 45.0%
CAAGCAAGCTATAGCTGTTC+TGG - Chr1:26689546-26689565 None:intergenic 45.0%
CACAGAAATTGTTGGCACCT+GGG - Chr1:26687394-26687413 None:intergenic 45.0%
CCAAGTTTCCGGTATTGCAA+TGG - Chr1:26686840-26686859 None:intergenic 45.0%
CCAATGAAGAAAGAGACGCA+AGG + Chr1:26688322-26688341 MsG0180001772.01.T01:CDS 45.0%
CCATTGCAATACCGGAAACT+TGG + Chr1:26686837-26686856 MsG0180001772.01.T01:CDS 45.0%
CCTTGCGTCTCTTTCTTCAT+TGG - Chr1:26688325-26688344 None:intergenic 45.0%
CTGAACCATCCAGTTCAGTT+TGG + Chr1:26690677-26690696 MsG0180001772.01.T01:intron 45.0%
GAGAAAAGCCTTAAGCGTCT+TGG + Chr1:26688666-26688685 MsG0180001772.01.T01:CDS 45.0%
GATAAGCTGCTAAGAAGCCA+TGG + Chr1:26686656-26686675 MsG0180001772.01.T01:exon 45.0%
GATCGCTACGTTGCATTGTT+TGG + Chr1:26688963-26688982 MsG0180001772.01.T01:CDS 45.0%
GGATTGATCCTCCGATTAGT+TGG + Chr1:26687472-26687491 MsG0180001772.01.T01:intron 45.0%
GTCATGACTTCTGCTGGTAA+AGG - Chr1:26690965-26690984 None:intergenic 45.0%
GTCCATGCAGCTAAAGTTGA+GGG + Chr1:26689499-26689518 MsG0180001772.01.T01:CDS 45.0%
GTTGAACCCTAACTTGGAGT+GGG + Chr1:26690208-26690227 MsG0180001772.01.T01:intron 45.0%
TCCAAGAACCAACTAATCGG+AGG - Chr1:26687483-26687502 None:intergenic 45.0%
TGTCCATGCAGCTAAAGTTG+AGG + Chr1:26689498-26689517 MsG0180001772.01.T01:CDS 45.0%
TGTGAGAGATCGTCCATTCA+TGG + Chr1:26690865-26690884 MsG0180001772.01.T01:CDS 45.0%
TGTTCAACAAACGGCACACT+AGG - Chr1:26689020-26689039 None:intergenic 45.0%
TTACCAGCAGAAGTCATGAC+AGG + Chr1:26690965-26690984 MsG0180001772.01.T01:CDS 45.0%
TTGAACCCTAACTTGGAGTG+GGG + Chr1:26690209-26690228 MsG0180001772.01.T01:intron 45.0%
TTGCTATCCTATTCCCCACT+AGG + Chr1:26690398-26690417 MsG0180001772.01.T01:CDS 45.0%
TTGGCGCACTAGTGAATGAT+AGG + Chr1:26687451-26687470 MsG0180001772.01.T01:intron 45.0%
! ACACTAGGCCTCCATTTTGA+AGG - Chr1:26689005-26689024 None:intergenic 45.0%
! GGACAATGCAGACATTTTGC+GGG + Chr1:26688614-26688633 MsG0180001772.01.T01:CDS 45.0%
! GGCATACATTCTCCTGCTTT+TGG + Chr1:26689994-26690013 MsG0180001772.01.T01:intron 45.0%
! GGGACAATGCAGACATTTTG+CGG + Chr1:26688613-26688632 MsG0180001772.01.T01:CDS 45.0%
! GGGGCCAAAATTGATTCCAA+AGG - Chr1:26687255-26687274 None:intergenic 45.0%
! TCCTCCGATTAGTTGGTTCT+TGG + Chr1:26687479-26687498 MsG0180001772.01.T01:intron 45.0%
!! AATTTTGGCCCCTCTAGAAG+TGG + Chr1:26687263-26687282 MsG0180001772.01.T01:intron 45.0%
!! CTTGAGTTGGCCAAGAAACA+TGG + Chr1:26690812-26690831 MsG0180001772.01.T01:CDS 45.0%
!! TTTTAGTTGCCAGAGGTGCA+AGG + Chr1:26689898-26689917 MsG0180001772.01.T01:intron 45.0%
!!! AGACATTTTGCGGGTTGATG+CGG + Chr1:26688623-26688642 MsG0180001772.01.T01:CDS 45.0%
!!! GTTTTGACTTAGAGAAGCCG+AGG + Chr1:26689142-26689161 MsG0180001772.01.T01:intron 45.0%
AGAAATGGCAACAACGTCGG+AGG - Chr1:26686700-26686719 None:intergenic 50.0%
CACCATGACCCTAAGTTAGC+GGG + Chr1:26690280-26690299 MsG0180001772.01.T01:intron 50.0%
CAGAAATTGTTGGCACCTGG+GGG - Chr1:26687392-26687411 None:intergenic 50.0%
CATCGTACCAGCATGACTTC+TGG + Chr1:26690596-26690615 MsG0180001772.01.T01:intron 50.0%
CTATCCTATTCCCCACTAGG+CGG + Chr1:26690401-26690420 MsG0180001772.01.T01:CDS 50.0%
GAATCTCTTCCCTGGCTACA+TGG + Chr1:26690484-26690503 MsG0180001772.01.T01:CDS 50.0%
GACGTTTGGGGAGCAAAACA+CGG + Chr1:26687912-26687931 MsG0180001772.01.T01:CDS 50.0%
GCACCATGACCCTAAGTTAG+CGG + Chr1:26690279-26690298 MsG0180001772.01.T01:intron 50.0%
GGAAGACTGAATCTCTTCCC+TGG + Chr1:26690476-26690495 MsG0180001772.01.T01:CDS 50.0%
GGTCAGAGTCACCAAGTTTC+CGG - Chr1:26686851-26686870 None:intergenic 50.0%
GTCCCTCAACTTTAGCTGCA+TGG - Chr1:26689504-26689523 None:intergenic 50.0%
GTGTCAAGTTTGAATCCCCC+AGG + Chr1:26687374-26687393 MsG0180001772.01.T01:intron 50.0%
GTTATGCGGCCGTACAAACT+GGG + Chr1:26691123-26691142 MsG0180001772.01.T01:three_prime_UTR 50.0%
!! CAATTGCGGTTTTGTCCGAG+TGG - Chr1:26690643-26690662 None:intergenic 50.0%
!! TTGATGGCGGCACAAACAAG+AGG - Chr1:26686813-26686832 None:intergenic 50.0%
AATCCAAGCGCGAGCTGAAC+AGG - Chr1:26690845-26690864 None:intergenic 55.0%
ACCAGCATGACTTCTGGGTC+AGG + Chr1:26690602-26690621 MsG0180001772.01.T01:intron 55.0%
ACCTGACCCAGAAGTCATGC+TGG - Chr1:26690606-26690625 None:intergenic 55.0%
AGCTGCTAAGAAGCCATGGC+CGG + Chr1:26686660-26686679 MsG0180001772.01.T01:exon 55.0%
CACCCGCTAACTTAGGGTCA+TGG - Chr1:26690285-26690304 None:intergenic 55.0%
CACCTTCAACCTTGCACCTC+TGG - Chr1:26689910-26689929 None:intergenic 55.0%
CATACTCCTAGGTCACCACC+AGG - Chr1:26687343-26687362 None:intergenic 55.0%
CGTTATGCGGCCGTACAAAC+TGG + Chr1:26691122-26691141 MsG0180001772.01.T01:three_prime_UTR 55.0%
GATGTGCACGAGTGTGGTGT+TGG + Chr1:26686560-26686579 MsG0180001772.01.T01:five_prime_UTR 55.0%
GGAGGAGAAAGAGCAGACAC+CGG - Chr1:26686682-26686701 None:intergenic 55.0%
TGAGGAGGACGAGAACTGTG+AGG + Chr1:26686787-26686806 MsG0180001772.01.T01:CDS 55.0%
! CAGAGGTGCAAGGTTGAAGG+TGG + Chr1:26689908-26689927 MsG0180001772.01.T01:intron 55.0%
! TGCCAGAGGTGCAAGGTTGA+AGG + Chr1:26689905-26689924 MsG0180001772.01.T01:intron 55.0%
AAAACCCGGCCTGTAACCCC+AGG + Chr1:26687311-26687330 MsG0180001772.01.T01:intron 60.0%
AAACCCGGCCTGTAACCCCA+GGG + Chr1:26687312-26687331 MsG0180001772.01.T01:intron 60.0%
AATCCCTGGGGTTACAGGCC+GGG - Chr1:26687318-26687337 None:intergenic 60.0%
ACTCCTGTTCAGCTCGCGCT+TGG + Chr1:26690839-26690858 MsG0180001772.01.T01:CDS 60.0%
AGGCCAATCCCTGGGGTTAC+AGG - Chr1:26687323-26687342 None:intergenic 60.0%
CAATCCCTGGGGTTACAGGC+CGG - Chr1:26687319-26687338 None:intergenic 60.0%
GAAAGAGCAGACACCGGCCA+TGG - Chr1:26686676-26686695 None:intergenic 60.0%
TCACCACCAGGCCAATCCCT+GGG - Chr1:26687331-26687350 None:intergenic 60.0%
TCCTATTCCCCACTAGGCGG+CGG + Chr1:26690404-26690423 MsG0180001772.01.T01:CDS 60.0%
! AGAGTGTTCCGCCGCCTAGT+GGG - Chr1:26690415-26690434 None:intergenic 60.0%
!! GATTGGCCTGGTGGTGACCT+AGG + Chr1:26687334-26687353 MsG0180001772.01.T01:intron 60.0%
!! TGTAACCCCAGGGATTGGCC+TGG + Chr1:26687322-26687341 MsG0180001772.01.T01:intron 60.0%
CACCACCAGGCCAATCCCTG+GGG - Chr1:26687330-26687349 None:intergenic 65.0%
CGGCCTGTAACCCCAGGGAT+TGG + Chr1:26687317-26687336 MsG0180001772.01.T01:intron 65.0%
CTAGGCGGCGGAACACTCTC+TGG + Chr1:26690416-26690435 MsG0180001772.01.T01:CDS 65.0%
GAGTGTTCCGCCGCCTAGTG+GGG - Chr1:26690414-26690433 None:intergenic 65.0%
GTCACCACCAGGCCAATCCC+TGG - Chr1:26687332-26687351 None:intergenic 65.0%
TCCGCCGCCTAGTGGGGAAT+AGG - Chr1:26690408-26690427 None:intergenic 65.0%
!! AACCCCAGGGATTGGCCTGG+TGG + Chr1:26687325-26687344 MsG0180001772.01.T01:intron 65.0%
!! GAGAGTGTTCCGCCGCCTAG+TGG - Chr1:26690416-26690435 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 26686550 26691279 26686550 ID=MsG0180001772.01;Name=MsG0180001772.01
Chr1 mRNA 26686550 26691279 26686550 ID=MsG0180001772.01.T01;Parent=MsG0180001772.01;Name=MsG0180001772.01.T01;_AED=0.33;_eAED=0.33;_QI=125|1|1|1|1|1|8|246|412
Chr1 exon 26690794 26691279 26690794 ID=MsG0180001772.01.T01:exon:35151;Parent=MsG0180001772.01.T01
Chr1 exon 26690354 26690532 26690354 ID=MsG0180001772.01.T01:exon:35150;Parent=MsG0180001772.01.T01
Chr1 exon 26689448 26689583 26689448 ID=MsG0180001772.01.T01:exon:35149;Parent=MsG0180001772.01.T01
Chr1 exon 26688959 26689076 26688959 ID=MsG0180001772.01.T01:exon:35148;Parent=MsG0180001772.01.T01
Chr1 exon 26688561 26688721 26688561 ID=MsG0180001772.01.T01:exon:35147;Parent=MsG0180001772.01.T01
Chr1 exon 26688313 26688396 26688313 ID=MsG0180001772.01.T01:exon:35146;Parent=MsG0180001772.01.T01
Chr1 exon 26687910 26688005 26687910 ID=MsG0180001772.01.T01:exon:35145;Parent=MsG0180001772.01.T01
Chr1 exon 26686550 26686899 26686550 ID=MsG0180001772.01.T01:exon:35144;Parent=MsG0180001772.01.T01
Chr1 five_prime_UTR 26686550 26686674 26686550 ID=MsG0180001772.01.T01:five_prime_utr;Parent=MsG0180001772.01.T01
Chr1 CDS 26686675 26686899 26686675 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 CDS 26687910 26688005 26687910 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 CDS 26688313 26688396 26688313 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 CDS 26688561 26688721 26688561 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 CDS 26688959 26689076 26688959 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 CDS 26689448 26689583 26689448 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 CDS 26690354 26690532 26690354 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 CDS 26690794 26691033 26690794 ID=MsG0180001772.01.T01:cds;Parent=MsG0180001772.01.T01
Chr1 three_prime_UTR 26691034 26691279 26691034 ID=MsG0180001772.01.T01:three_prime_utr;Parent=MsG0180001772.01.T01
Gene Sequence

>MsG0180001772.01.T01

ATGGCCGGTGTCTGCTCTTTCTCCTCCGACGTTGTTGCCATTTCTCATTCTCTCACACCATCACTGTCTCTCAACAATACACTTTTAACAAGAAGTAAAAGAAGATGCATTCTGAGGAGGACGAGAACTGTGAGGCCTCTTGTTTGTGCCGCCATCAACAATCCATTGCAATACCGGAAACTTGGTGACTCTGACCTTAATATCAGTGAAATCACTCTTGGTACTATGACGTTTGGGGAGCAAAACACGGAAAAAGAATCTCATGACATACTCAATTATGCATTTGAGAATGGCATTAATGCTCTTGATACTGCTGAGGCTTACCCGATTCCAATGAAGAAAGAGACGCAAGGAAAAACTGATCTCTATATAGCTAGCTGGCTGAAATCTCAATCTCGTGACAAGATTATCATAGCAACAAAAGTTTGCGGTTATTCTGAGAGATCGAGTTACTTACGGGACAATGCAGACATTTTGCGGGTTGATGCGGCAAATATCAAAGAAAGTGTGGAGAAAAGCCTTAAGCGTCTTGGGACTGATTATATTGATTTGTTGCAGATTCATTGGCCAGATCGCTACGTTGCATTGTTTGGTGAATATTCCTATGATCCTTCAAAATGGAGGCCTAGTGTGCCGTTTGTTGAACAGTTGCAAGCTTTTCAAGAACTTATCAATGAAGGAAAGGTACGTTACATAGGTGTTTCAAATGAGACTTCATATGGAGTGATGGAATTTGTCCATGCAGCTAAAGTTGAGGGACTTCCAAAGATTGTCAGTATCCAGAACAGCTATAGCTTGCTTGTGAGAAGTCGTTTTGAAGTTGATCTCGTGGAAGTTTGCCATCCAAAGAATTGCAACATTGGCTTGCTATCCTATTCCCCACTAGGCGGCGGAACACTCTCTGGAAAATATATAGATATAAATTCTAAAGCTGCAAAAAGTGGAAGACTGAATCTCTTCCCTGGCTACATGGAAAGATATAACCAATCACTTTCACGGGAAGCAACTATTAAGTATCTTGAGTTGGCCAAGAAACATGGTCTAACTCCTGTTCAGCTCGCGCTTGGATTTGTGAGAGATCGTCCATTCATGGCGAGTTCAATTATCGGTGCAACATCTGTGGACCAACTAAAAGAAGACATTGATGCTTTTACAACAACTGAACGGCCTTTACCAGCAGAAGTCATGACAGGAATTGAAGCTATCTTCAAGAGATACAAAGATCCTAGCATCCTTTAA

Protein sequence

>MsG0180001772.01.T01

MAGVCSFSSDVVAISHSLTPSLSLNNTLLTRSKRRCILRRTRTVRPLVCAAINNPLQYRKLGDSDLNISEITLGTMTFGEQNTEKESHDILNYAFENGINALDTAEAYPIPMKKETQGKTDLYIASWLKSQSRDKIIIATKVCGYSERSSYLRDNADILRVDAANIKESVEKSLKRLGTDYIDLLQIHWPDRYVALFGEYSYDPSKWRPSVPFVEQLQAFQELINEGKVRYIGVSNETSYGVMEFVHAAKVEGLPKIVSIQNSYSLLVRSRFEVDLVEVCHPKNCNIGLLSYSPLGGGTLSGKYIDINSKAAKSGRLNLFPGYMERYNQSLSREATIKYLELAKKHGLTPVQLALGFVRDRPFMASSIIGATSVDQLKEDIDAFTTTERPLPAEVMTGIEAIFKRYKDPSIL*