AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046402.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046402.01.T01 MTR_4g107440 81.235 421 24 2 27 392 16 436 0.0 657
MsG0880046402.01.T01 MTR_4g107440 93.827 162 10 0 408 569 530 691 5.75e-97 321
MsG0880046402.01.T01 MTR_6g083900 25.428 409 237 9 40 392 36 432 8.42e-25 110
MsG0880046402.01.T01 MTR_6g083900 36.301 146 75 4 417 561 578 706 5.64e-14 75.9
MsG0880046402.01.T01 MTR_8g104410 25.791 411 228 9 46 392 37 434 2.05e-24 108
MsG0880046402.01.T01 MTR_8g104410 48.684 76 38 1 487 561 641 716 1.13e-13 74.7
MsG0880046402.01.T01 MTR_8g104410 48.684 76 38 1 487 561 405 480 7.28e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046402.01.T01 AT1G74770 30.263 684 295 27 44 569 28 687 9.29e-55 201
MsG0880046402.01.T01 AT1G74770 30.263 684 295 27 44 569 28 687 9.55e-55 201
MsG0880046402.01.T01 AT1G18910 31.507 438 212 10 27 392 12 433 3.09e-44 169
MsG0880046402.01.T01 AT1G18910 44.025 159 83 1 411 569 530 682 2.40e-27 118
MsG0880046402.01.T01 AT3G18290 26.531 294 198 5 108 392 159 443 2.97e-21 99.0

Find 106 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTCAAATCTTTCTTAA+TGG 0.165016 8:-72935952 None:intergenic
CTCATACTTGCTCACACTTT+TGG 0.185809 8:-72937489 None:intergenic
TTGTCCTATTCCTCATCTTC+TGG 0.209206 8:+72937464 MsG0880046402.01.T01:CDS
TGTTCTTTAGCAGACAATTT+TGG 0.230266 8:-72935442 None:intergenic
TCTCTCCCCGCCCTCGTTGA+TGG 0.237963 8:+72931665 MsG0880046402.01.T01:exon
AATATCAGGTCAATTGGTTT+TGG 0.241534 8:-72937629 None:intergenic
ACTTATCCAGCTAAAATTCT+TGG 0.265565 8:+72936040 MsG0880046402.01.T01:CDS
CTCTCCCCGCCCTCGTTGAT+GGG 0.273223 8:+72931666 MsG0880046402.01.T01:exon
CTAATAAGAAATTCCGGTTC+TGG 0.275911 8:+72935993 MsG0880046402.01.T01:CDS
ACTTCCTCCAGCAACATTAT+AGG 0.279336 8:-72935499 None:intergenic
CAAGGCTATTAAGAAAGATT+TGG 0.279486 8:+72937661 MsG0880046402.01.T01:CDS
AGATTAAAGTTCTCCATCTT+TGG 0.282699 8:+72935922 MsG0880046402.01.T01:CDS
CTGATGTCCTCATCATTTAC+AGG 0.283854 8:+72936063 MsG0880046402.01.T01:CDS
GATTTGGATTACCTGGTTCT+TGG 0.328945 8:+72937677 MsG0880046402.01.T01:CDS
GTTAGAGGGGCATGATGATT+TGG 0.339167 8:+72937709 MsG0880046402.01.T01:CDS
AGATCCTTCCTTATCGGATA+TGG 0.341556 8:+72931729 MsG0880046402.01.T01:CDS
TCTTGGCTCATCTCAGTTAG+AGG 0.346802 8:+72937694 MsG0880046402.01.T01:CDS
TGCTGAAACTGCGTCGTCCT+TGG 0.348291 8:+72931893 MsG0880046402.01.T01:CDS
GGATCCAGAAGATGAGGAAT+AGG 0.349817 8:-72937468 None:intergenic
TTGGTCCGAGTTCATTCAAT+AGG 0.354396 8:+72935832 MsG0880046402.01.T01:CDS
GGAAATAGTGTTCCCAGCTT+TGG 0.358463 8:+72937799 MsG0880046402.01.T01:CDS
CCTCCGCATCACTATGGATT+TGG 0.369354 8:-72937775 None:intergenic
TAGACTTGGAAAGTCGGTTA+TGG 0.374692 8:-72936293 None:intergenic
TTTCCTCCTCCGCATCACTA+TGG 0.374978 8:-72937781 None:intergenic
CTTTATCTAATAAGAAATTC+CGG 0.393478 8:+72935987 MsG0880046402.01.T01:CDS
AAAGATGGAGAACTTTAATC+TGG 0.397162 8:-72935920 None:intergenic
TGGCCTATTGCCTCCAAAGC+TGG 0.404084 8:-72937812 None:intergenic
ACACTTCTTGGATGAGCTGA+TGG 0.415060 8:+72934127 MsG0880046402.01.T01:CDS
ACTATTTCACGGCAACGGTT+TGG 0.426162 8:-72931924 None:intergenic
CTTAACTTCAGAGCAGTGTC+AGG 0.426892 8:-72937551 None:intergenic
TAGTGTTCCTATAATGTTGC+TGG 0.432236 8:+72935492 MsG0880046402.01.T01:CDS
AGACTTGGAAAGTCGGTTAT+GGG 0.435699 8:-72936292 None:intergenic
TCTTGCAGTGTTGTTTCCAT+TGG 0.452534 8:-72935595 None:intergenic
CTCTTCCTCCATATCCGATA+AGG 0.457568 8:-72931737 None:intergenic
GAAGCTTAACAACTATTTCA+CGG 0.471904 8:-72931935 None:intergenic
AAATTAATTCCTGTGGAGTA+TGG 0.476959 8:-72937515 None:intergenic
TTGAATGAACTCGGACCAAA+TGG 0.479156 8:-72935828 None:intergenic
TAATGGCGTTATGCCAAAGA+TGG 0.482078 8:-72935935 None:intergenic
GAATTTGCTGCATGAAGTCT+TGG 0.482807 8:-72937581 None:intergenic
CACTTCTTGGATGAGCTGAT+GGG 0.490110 8:+72934128 MsG0880046402.01.T01:CDS
CTTGGCTCATCTCAGTTAGA+GGG 0.492451 8:+72937695 MsG0880046402.01.T01:CDS
AAGTCTACTGAACATTTCCT+TGG 0.493469 8:+72936309 MsG0880046402.01.T01:CDS
AGGAGGAGATCCTTCCTTAT+CGG 0.493689 8:+72931723 MsG0880046402.01.T01:CDS
AATGACAAAGAAACAGAAGA+TGG 0.493756 8:+72935891 MsG0880046402.01.T01:CDS
TTCCCAGCTTTGGAGGCAAT+AGG 0.498064 8:+72937809 MsG0880046402.01.T01:CDS
TAAGAAAGATTTGGATTACC+TGG 0.500025 8:+72937670 MsG0880046402.01.T01:CDS
CAAGTTCAGAACGCAGAGCT+TGG 0.505710 8:-72931854 None:intergenic
AAATTTGTAGAGAAGCTTTG+CGG 0.506688 8:+72936399 MsG0880046402.01.T01:CDS
GAGGAACTCCAAGGTTCTCA+TGG 0.507247 8:+72935786 MsG0880046402.01.T01:CDS
TAACCCCATCAACGAGGGCG+GGG 0.507249 8:-72931670 None:intergenic
CTTATCGGATATGGAGGAAG+AGG 0.508490 8:+72931738 MsG0880046402.01.T01:CDS
AAGGAAATGTTCAGTAGACT+TGG 0.518193 8:-72936307 None:intergenic
AGAAAATGAAGGAAGCTTGT+GGG 0.524602 8:+72937387 MsG0880046402.01.T01:CDS
GTAACCCCATCAACGAGGGC+GGG 0.525470 8:-72931671 None:intergenic
AATCCATAGTGATGCGGAGG+AGG 0.526381 8:+72937778 MsG0880046402.01.T01:CDS
CGGATATGGAGGAAGAGGAG+AGG 0.527604 8:+72931743 MsG0880046402.01.T01:CDS
CATGTTTGTGATCAAAGTGT+AGG 0.528781 8:-72937854 None:intergenic
AATAGTGTTCCCAGCTTTGG+AGG 0.531830 8:+72937802 MsG0880046402.01.T01:CDS
GGCCTATTGCCTCCAAAGCT+GGG 0.536547 8:-72937811 None:intergenic
CTGCTTGTTTATCTGCTGAA+AGG 0.541320 8:-72935543 None:intergenic
AAACAAACGAAGAGAAGTAT+AGG 0.546504 8:-72931828 None:intergenic
TTGTTTATCTGCTGAAAGGA+AGG 0.548791 8:-72935539 None:intergenic
GTTCAGAACGCAGAGCTTGG+TGG 0.550240 8:-72931851 None:intergenic
AGGAGAGGAAAACGATGTGA+TGG 0.550670 8:+72931758 MsG0880046402.01.T01:CDS
ATGACAAAGAAACAGAAGAT+GGG 0.553658 8:+72935892 MsG0880046402.01.T01:CDS
GAGAAAATGAAGGAAGCTTG+TGG 0.556774 8:+72937386 MsG0880046402.01.T01:CDS
CTCAATTGAAAAGTTCCGAC+AGG 0.557534 8:+72937324 MsG0880046402.01.T01:CDS
TTGAACATAACAGCACCAAT+GGG 0.557659 8:+72934087 MsG0880046402.01.T01:intron
GACGACGCAGTTTCAGCAAA+CGG 0.560323 8:-72931888 None:intergenic
CTTGAACATAACAGCACCAA+TGG 0.564553 8:+72934086 MsG0880046402.01.T01:intron
AATAGAATCAAACAGCCCAT+TGG 0.580674 8:-72934102 None:intergenic
TAACAACTATTTCACGGCAA+CGG 0.584286 8:-72931929 None:intergenic
GTAGGAATCCATGAGAACCT+TGG 0.584879 8:-72935794 None:intergenic
GTTCAGTAGACTTGGAAAGT+CGG 0.586659 8:-72936299 None:intergenic
TCTCCCCGCCCTCGTTGATG+GGG 0.595433 8:+72931667 MsG0880046402.01.T01:exon
AATGGAAACAACACTGCAAG+AGG 0.596748 8:+72935597 MsG0880046402.01.T01:CDS
TATGTGCAAATTAATTCCTG+TGG 0.596921 8:-72937522 None:intergenic
TCCTTCCTTATCGGATATGG+AGG 0.602235 8:+72931732 MsG0880046402.01.T01:CDS
TTGGCTCATCTCAGTTAGAG+GGG 0.602553 8:+72937696 MsG0880046402.01.T01:CDS
CTGAAAATATGTCCTAGTGA+AGG 0.604553 8:-72935760 None:intergenic
AGTAACCCCATCAACGAGGG+CGG 0.608390 8:-72931672 None:intergenic
ACGGTTTGGATCATGTTCCA+AGG 0.612507 8:-72931910 None:intergenic
AAGCAGCCACATAAAAGTTG+TGG 0.612852 8:+72937431 MsG0880046402.01.T01:CDS
ACATATGCTGCAAGTCCTGT+CGG 0.614416 8:-72937339 None:intergenic
TTTCAGAGTGAGGAACTCCA+AGG 0.615602 8:+72935777 MsG0880046402.01.T01:CDS
TCCTCCATATCCGATAAGGA+AGG 0.618279 8:-72931733 None:intergenic
TATGAGACACCATACTCCAC+AGG 0.618586 8:+72937506 MsG0880046402.01.T01:CDS
TGACAAAGAAACAGAAGATG+GGG 0.619682 8:+72935893 MsG0880046402.01.T01:CDS
AAGAACAAGCCTCACTTGTG+TGG 0.624146 8:+72935458 MsG0880046402.01.T01:CDS
GAAAGGAAGGATACCATCCA+TGG 0.624285 8:-72935526 None:intergenic
TCATTGCGCTGCTGAAGATG+AGG 0.625736 8:+72931994 MsG0880046402.01.T01:CDS
CCAAATCCATAGTGATGCGG+AGG 0.625818 8:+72937775 MsG0880046402.01.T01:CDS
TAGTTCCTATTGAATGAACT+CGG 0.626105 8:-72935837 None:intergenic
ACTGAGATGAGCCAAGAACC+AGG 0.628393 8:-72937688 None:intergenic
AGTATTACCTGTAAATGATG+AGG 0.629939 8:-72936070 None:intergenic
CCCATCTACAGTGAAAATGT+CGG 0.631028 8:-72931700 None:intergenic
GCAACAATCAAACCTTCACT+AGG 0.639654 8:+72935748 MsG0880046402.01.T01:CDS
TTAACTTCAGAGCAGTGTCA+GGG 0.642545 8:-72937550 None:intergenic
TATGAATTGCCACACAAGTG+AGG 0.645881 8:-72935467 None:intergenic
GTCAGTAACCCCATCAACGA+GGG 0.647057 8:-72931675 None:intergenic
TGTTCCTATAATGTTGCTGG+AGG 0.651755 8:+72935495 MsG0880046402.01.T01:CDS
CTTCAATGTGACTTTCACCA+AGG 0.654694 8:-72936326 None:intergenic
TTGTGATCAAAGTGTAGGCA+TGG 0.662122 8:-72937849 None:intergenic
TCACCAAATCCATAGTGATG+CGG 0.678375 8:+72937772 MsG0880046402.01.T01:CDS
ATCTACAGTGAAAATGTCGG+CGG 0.696904 8:-72931697 None:intergenic
GGTCAGTAACCCCATCAACG+AGG 0.704261 8:-72931676 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACATCATTAATTATTTTA+TGG - Chr8:72933838-72933857 None:intergenic 10.0%
!!! ATTTAAGTTTATTTTTTGTT+AGG + Chr8:72933761-72933780 MsG0880046402.01.T01:intron 10.0%
!!! CAAATTAATCTTTTTTTTTT+TGG - Chr8:72932447-72932466 None:intergenic 10.0%
!!! TATAACTTCAAAATAATTTT+TGG + Chr8:72934006-72934025 MsG0880046402.01.T01:intron 10.0%
!!! TTTAAGTTTATTTTTTGTTA+GGG + Chr8:72933762-72933781 MsG0880046402.01.T01:intron 10.0%
!! AACCTAAATGAAAATTAATA+TGG - Chr8:72933396-72933415 None:intergenic 15.0%
!! AATTTCAAAATTAAAGATGT+AGG - Chr8:72935315-72935334 None:intergenic 15.0%
!! ACCTAAATGAAAATTAATAT+GGG - Chr8:72933395-72933414 None:intergenic 15.0%
!! ATAAAACAACCTTAAAATAT+AGG + Chr8:72934852-72934871 MsG0880046402.01.T01:intron 15.0%
!! ATTTAAATAAAATAGAGTGA+AGG + Chr8:72933576-72933595 MsG0880046402.01.T01:intron 15.0%
!! CCTATTTATAAGAAAAATTT+GGG - Chr8:72933121-72933140 None:intergenic 15.0%
!! TAAAACAACCTTAAAATATA+GGG + Chr8:72934853-72934872 MsG0880046402.01.T01:intron 15.0%
!! TAGATCTGAATTATTAAAAA+AGG - Chr8:72935697-72935716 None:intergenic 15.0%
!! TATTTAAGCTATAGTTATAA+AGG - Chr8:72934835-72934854 None:intergenic 15.0%
!! TCCTATTTATAAGAAAAATT+TGG - Chr8:72933122-72933141 None:intergenic 15.0%
!! TGTAAAATTATGTTTGAATT+TGG + Chr8:72932821-72932840 MsG0880046402.01.T01:intron 15.0%
!! TTAAAGAAAAGTTCAATTTA+TGG + Chr8:72936918-72936937 MsG0880046402.01.T01:intron 15.0%
!! TTAATTAGTTAATCCTTTAT+TGG - Chr8:72934799-72934818 None:intergenic 15.0%
!!! AATTGAACTTTTCTTTAAAA+TGG - Chr8:72936916-72936935 None:intergenic 15.0%
!!! ATCATTAATTATTTTATGGA+GGG - Chr8:72933834-72933853 None:intergenic 15.0%
!!! ATCTATAACTTTTCTTAATA+GGG - Chr8:72933426-72933445 None:intergenic 15.0%
!!! ATTTTTTCTTCTTCATTTAA+AGG + Chr8:72937005-72937024 MsG0880046402.01.T01:intron 15.0%
!!! TGTATATATAATTGACTTAA+TGG + Chr8:72933549-72933568 MsG0880046402.01.T01:intron 15.0%
!!! TTAAGTTTATTTTTTGTTAG+GGG + Chr8:72933763-72933782 MsG0880046402.01.T01:intron 15.0%
!!! TTATACTACTTTTTAATGTT+TGG + Chr8:72933974-72933993 MsG0880046402.01.T01:intron 15.0%
!!! TTATTTAGTTTATTCGATTT+TGG + Chr8:72934499-72934518 MsG0880046402.01.T01:intron 15.0%
!! AAACACCTAATAAACAAATA+GGG - Chr8:72937071-72937090 None:intergenic 20.0%
!! ACGGTCTAATAATAAAATAA+AGG - Chr8:72932045-72932064 None:intergenic 20.0%
!! ACTAGTTAAGGAATTATAAA+GGG - Chr8:72936652-72936671 None:intergenic 20.0%
!! ATATCTAACTTAAATGATTG+TGG + Chr8:72932976-72932995 MsG0880046402.01.T01:intron 20.0%
!! ATCTGAATTATTAAAAAAGG+CGG - Chr8:72935694-72935713 None:intergenic 20.0%
!! CTTTATCTAATAAGAAATTC+CGG + Chr8:72935987-72936006 MsG0880046402.01.T01:CDS 20.0%
!! GAAAGTTATATTCAGAAATT+TGG - Chr8:72936219-72936238 None:intergenic 20.0%
!! GATAGATTTCATATAATTCA+GGG - Chr8:72932275-72932294 None:intergenic 20.0%
!! TAAGAGATTAATTAACATTG+AGG - Chr8:72932909-72932928 None:intergenic 20.0%
!! TAATAAAATATCCACATGTT+GGG + Chr8:72936744-72936763 MsG0880046402.01.T01:intron 20.0%
!! TACTAAAATGTGTTATAACT+TGG + Chr8:72937170-72937189 MsG0880046402.01.T01:intron 20.0%
!! TAGTATAAGAAAACTTGTAT+TGG + Chr8:72933149-72933168 MsG0880046402.01.T01:intron 20.0%
!! TATCTAACTTAAATGATTGT+GGG + Chr8:72932977-72932996 MsG0880046402.01.T01:intron 20.0%
!! TATTAAACTGATGAACTAAA+AGG - Chr8:72936729-72936748 None:intergenic 20.0%
!! TTAATAAAATATCCACATGT+TGG + Chr8:72936743-72936762 MsG0880046402.01.T01:intron 20.0%
!! TTCTTATAGTATATAGATCA+TGG + Chr8:72934534-72934553 MsG0880046402.01.T01:intron 20.0%
!! TTCTTTCAAATCTTTCTTAA+TGG - Chr8:72935955-72935974 None:intergenic 20.0%
!!! AAATTAATATTTGTTGGACA+TGG - Chr8:72935087-72935106 None:intergenic 20.0%
!!! ATTTTTCTTATAAATAGGAC+CGG + Chr8:72933123-72933142 MsG0880046402.01.T01:intron 20.0%
!!! CATCATTAATTATTTTATGG+AGG - Chr8:72933835-72933854 None:intergenic 20.0%
!!! CATCTATAACTTTTCTTAAT+AGG - Chr8:72933427-72933446 None:intergenic 20.0%
!!! CCCAAATTTTTCTTATAAAT+AGG + Chr8:72933118-72933137 MsG0880046402.01.T01:intron 20.0%
!!! GAAAAAATTGTTGATGAATA+TGG - Chr8:72936993-72937012 None:intergenic 20.0%
!!! TAAATATATGAAGTTTTCAG+TGG + Chr8:72936850-72936869 MsG0880046402.01.T01:intron 20.0%
!!! TATCACTAACATTTTCAAAT+TGG - Chr8:72933741-72933760 None:intergenic 20.0%
!!! TATTCTCTCTAAAACTAATA+AGG - Chr8:72933222-72933241 None:intergenic 20.0%
!!! TCCCATATTAATTTTCATTT+AGG + Chr8:72933391-72933410 MsG0880046402.01.T01:intron 20.0%
!!! TCTATAACTTTTCTTAATAG+GGG - Chr8:72933425-72933444 None:intergenic 20.0%
!!! TCTCTTAAGCATTTTTTTAA+CGG + Chr8:72932922-72932941 MsG0880046402.01.T01:intron 20.0%
!!! TCTTTTTTGGATCAAATTTA+TGG + Chr8:72936954-72936973 MsG0880046402.01.T01:intron 20.0%
!!! TTTATCTTGATAATACGTTT+AGG - Chr8:72936790-72936809 None:intergenic 20.0%
!!! TTTTTTTTCAAAGAGTGATT+TGG - Chr8:72933634-72933653 None:intergenic 20.0%
! AAACGTGTATTTATCACAAT+AGG - Chr8:72934400-72934419 None:intergenic 25.0%
! AAAGAACAAAAGATGTAACT+AGG - Chr8:72934289-72934308 None:intergenic 25.0%
! AAATATCTAACTTAAAACCG+TGG - Chr8:72932561-72932580 None:intergenic 25.0%
! AAGAAAAATATCAGGTCAAT+TGG - Chr8:72937638-72937657 None:intergenic 25.0%
! AATAAAATATCCACATGTTG+GGG + Chr8:72936745-72936764 MsG0880046402.01.T01:intron 25.0%
! AATATCTAACTTAAAACCGT+GGG - Chr8:72932560-72932579 None:intergenic 25.0%
! AATGTGACATTAATATGAGA+CGG + Chr8:72933887-72933906 MsG0880046402.01.T01:intron 25.0%
! ACCATCGTCATATATTATTT+GGG - Chr8:72936700-72936719 None:intergenic 25.0%
! ACTCAGAGAGTAAATTAATT+GGG - Chr8:72934760-72934779 None:intergenic 25.0%
! ATGACAATGAAATGTATGAA+GGG + Chr8:72935258-72935277 MsG0880046402.01.T01:intron 25.0%
! CAATAAAATATTACTCCTTC+CGG + Chr8:72933011-72933030 MsG0880046402.01.T01:intron 25.0%
! CACAATAGGTTCAAATAAAT+GGG - Chr8:72934386-72934405 None:intergenic 25.0%
! CACTAGTTAAGGAATTATAA+AGG - Chr8:72936653-72936672 None:intergenic 25.0%
! CGAGTCAAATTAATATTTGT+TGG - Chr8:72935093-72935112 None:intergenic 25.0%
! CGATAGATTTCATATAATTC+AGG - Chr8:72932276-72932295 None:intergenic 25.0%
! CTACATATAGAAAAACCATT+TGG + Chr8:72935813-72935832 MsG0880046402.01.T01:CDS 25.0%
! CTTACTTCGTAAAATCAATT+AGG + Chr8:72932517-72932536 MsG0880046402.01.T01:intron 25.0%
! GAAACACCTAATAAACAAAT+AGG - Chr8:72937072-72937091 None:intergenic 25.0%
! GATTAAACAGCAATGTTAAT+AGG - Chr8:72932101-72932120 None:intergenic 25.0%
! TAAATAGTAAATACATCCCA+CGG + Chr8:72932541-72932560 MsG0880046402.01.T01:intron 25.0%
! TAATTCAGATCTAATTGTGA+AGG + Chr8:72935704-72935723 MsG0880046402.01.T01:intron 25.0%
! TATGAATGTTCATCAATTCT+TGG + Chr8:72932315-72932334 MsG0880046402.01.T01:intron 25.0%
! TATTATTAGACCGTAGAATT+AGG + Chr8:72932051-72932070 MsG0880046402.01.T01:intron 25.0%
! TATTTATGTGTCTGTATAAG+TGG - Chr8:72936836-72936855 None:intergenic 25.0%
! TCAACAAAAGTTAATGTATC+TGG + Chr8:72933058-72933077 MsG0880046402.01.T01:intron 25.0%
! TCACAATAGGTTCAAATAAA+TGG - Chr8:72934387-72934406 None:intergenic 25.0%
! TCTGAATTATTAAAAAAGGC+GGG - Chr8:72935693-72935712 None:intergenic 25.0%
! TTAAACACATCCTAATTCTA+CGG - Chr8:72932064-72932083 None:intergenic 25.0%
! TTTCAAATTGGAGACAAATT+AGG - Chr8:72933729-72933748 None:intergenic 25.0%
!! CAAATGGTTTTTCTATATGT+AGG - Chr8:72935815-72935834 None:intergenic 25.0%
!! GCATTTTACCCTATATTTTA+AGG - Chr8:72934864-72934883 None:intergenic 25.0%
!! TGATTCTATTTTACACTTCT+TGG + Chr8:72934115-72934134 MsG0880046402.01.T01:CDS 25.0%
!! TTCTCTACAAATTTTGTCAA+AGG - Chr8:72936393-72936412 None:intergenic 25.0%
!! TTTTAATGAAATTGCACCAA+TGG + Chr8:72935579-72935598 MsG0880046402.01.T01:CDS 25.0%
!! TTTTTCATCTGAGAAAATGA+AGG + Chr8:72937376-72937395 MsG0880046402.01.T01:CDS 25.0%
!!! ACAATTTTTTTAACTCAGCA+AGG + Chr8:72936496-72936515 MsG0880046402.01.T01:intron 25.0%
!!! ATTCTCTTTTCAAGAAATTG+AGG + Chr8:72936458-72936477 MsG0880046402.01.T01:CDS 25.0%
!!! CTAATTGATTTTACGAAGTA+AGG - Chr8:72932519-72932538 None:intergenic 25.0%
!!! CTAGCTATATCTTTCTTTTT+TGG + Chr8:72936941-72936960 MsG0880046402.01.T01:intron 25.0%
!!! GGTAAATATTTGCTATTATC+AGG + Chr8:72934249-72934268 MsG0880046402.01.T01:intron 25.0%
!!! TGGATACTTTTTATGACTTA+AGG - Chr8:72932620-72932639 None:intergenic 25.0%
!!! TTTAGTTTATTCGATTTTGG+TGG + Chr8:72934502-72934521 MsG0880046402.01.T01:intron 25.0%
AAAAACCACATTGATCCATT+AGG - Chr8:72934331-72934350 None:intergenic 30.0%
AAAGATGGAGAACTTTAATC+TGG - Chr8:72935923-72935942 None:intergenic 30.0%
AAATTAATTCCTGTGGAGTA+TGG - Chr8:72937518-72937537 None:intergenic 30.0%
AAATTTGTAGAGAAGCTTTG+CGG + Chr8:72936399-72936418 MsG0880046402.01.T01:CDS 30.0%
AAGTGAACCAAAGTTGAAAA+GGG - Chr8:72934904-72934923 None:intergenic 30.0%
AATGACAAAGAAACAGAAGA+TGG + Chr8:72935891-72935910 MsG0880046402.01.T01:CDS 30.0%
ACTGATGAACTAAAAGGTTA+AGG - Chr8:72936723-72936742 None:intergenic 30.0%
ACTTATCCAGCTAAAATTCT+TGG + Chr8:72936040-72936059 MsG0880046402.01.T01:CDS 30.0%
ACTTATCTGCATTAATGCAA+AGG + Chr8:72934659-72934678 MsG0880046402.01.T01:intron 30.0%
AGATTAAAGTTCTCCATCTT+TGG + Chr8:72935922-72935941 MsG0880046402.01.T01:CDS 30.0%
AGCAATTGTAATAGGAAGTT+AGG + Chr8:72934564-72934583 MsG0880046402.01.T01:intron 30.0%
AGTATTACCTGTAAATGATG+AGG - Chr8:72936073-72936092 None:intergenic 30.0%
ATGACAAAGAAACAGAAGAT+GGG + Chr8:72935892-72935911 MsG0880046402.01.T01:CDS 30.0%
ATTCTCTATTGCATAAAGGA+GGG + Chr8:72937229-72937248 MsG0880046402.01.T01:intron 30.0%
CAAGGCTATTAAGAAAGATT+TGG + Chr8:72937661-72937680 MsG0880046402.01.T01:CDS 30.0%
CACTCAGAGAGTAAATTAAT+TGG - Chr8:72934761-72934780 None:intergenic 30.0%
CATGACAATGAAATGTATGA+AGG + Chr8:72935257-72935276 MsG0880046402.01.T01:intron 30.0%
CCTTGTGAAAGAAAAATATC+AGG - Chr8:72937646-72937665 None:intergenic 30.0%
CTCGGTTAAAAGTTATTATG+TGG + Chr8:72932662-72932681 MsG0880046402.01.T01:intron 30.0%
CTGAAATGTCTCTTGTAAAT+AGG - Chr8:72933038-72933057 None:intergenic 30.0%
CTGAATTATTAAAAAAGGCG+GGG - Chr8:72935692-72935711 None:intergenic 30.0%
CTTCATACATTTCATTGTCA+TGG - Chr8:72935259-72935278 None:intergenic 30.0%
GAAGCTTAACAACTATTTCA+CGG - Chr8:72931938-72931957 None:intergenic 30.0%
GACCATCGTCATATATTATT+TGG - Chr8:72936701-72936720 None:intergenic 30.0%
GAGATTAATTAACATTGAGG+TGG - Chr8:72932906-72932925 None:intergenic 30.0%
GTACTGAAAGCAATTGTAAT+AGG + Chr8:72934556-72934575 MsG0880046402.01.T01:intron 30.0%
TAAGAAAGATTTGGATTACC+TGG + Chr8:72937670-72937689 MsG0880046402.01.T01:CDS 30.0%
TAAGTGAACCAAAGTTGAAA+AGG - Chr8:72934905-72934924 None:intergenic 30.0%
TAGTTCCTATTGAATGAACT+CGG - Chr8:72935840-72935859 None:intergenic 30.0%
TATGTGCAAATTAATTCCTG+TGG - Chr8:72937525-72937544 None:intergenic 30.0%
TCAAGAATTGAAGCCAATAA+AGG + Chr8:72934783-72934802 MsG0880046402.01.T01:intron 30.0%
TCAATTTCTCAGACTAACAT+AGG - Chr8:72932129-72932148 None:intergenic 30.0%
TCCCAAATAATATATGACGA+TGG + Chr8:72936696-72936715 MsG0880046402.01.T01:intron 30.0%
TGAATTATTAAAAAAGGCGG+GGG - Chr8:72935691-72935710 None:intergenic 30.0%
TGACAATGAAATGTATGAAG+GGG + Chr8:72935259-72935278 MsG0880046402.01.T01:intron 30.0%
TGACACCCTATTTGTTTATT+AGG + Chr8:72937063-72937082 MsG0880046402.01.T01:intron 30.0%
TGGTTACAGATTTCCAAAAA+CGG + Chr8:72937729-72937748 MsG0880046402.01.T01:CDS 30.0%
TTTAGAAAGAACTGCAGAAA+TGG + Chr8:72937097-72937116 MsG0880046402.01.T01:intron 30.0%
TTTCATGCAATTAATTGCTC+AGG + Chr8:72935196-72935215 MsG0880046402.01.T01:intron 30.0%
! AAACAAACGAAGAGAAGTAT+AGG - Chr8:72931831-72931850 None:intergenic 30.0%
! AAGTTTTCTTATACTACCTC+CGG - Chr8:72933145-72933164 None:intergenic 30.0%
! AATACGTTTAGGATCAAGAA+TGG - Chr8:72936779-72936798 None:intergenic 30.0%
! AGATCTAATTGTGAAGGTTT+TGG + Chr8:72935710-72935729 MsG0880046402.01.T01:intron 30.0%
! ATATGAGATTGAACCGTTTT+TGG - Chr8:72937745-72937764 None:intergenic 30.0%
! ATGAGCATTTTAGATAGAAG+AGG - Chr8:72936177-72936196 None:intergenic 30.0%
! CCTGATATTTTTCTTTCACA+AGG + Chr8:72937643-72937662 MsG0880046402.01.T01:CDS 30.0%
! CGGAAGGAGTAATATTTTAT+TGG - Chr8:72933013-72933032 None:intergenic 30.0%
! TATAGAGGTGTAACTAACTT+GGG + Chr8:72933302-72933321 MsG0880046402.01.T01:intron 30.0%
! TGTTCTTTAGCAGACAATTT+TGG - Chr8:72935445-72935464 None:intergenic 30.0%
! TTATAGAGGTGTAACTAACT+TGG + Chr8:72933301-72933320 MsG0880046402.01.T01:intron 30.0%
! TTTTTGTCCTTTCAAAGTTG+AGG - Chr8:72935030-72935049 None:intergenic 30.0%
!! AATATCAGGTCAATTGGTTT+TGG - Chr8:72937632-72937651 None:intergenic 30.0%
!! ACTCTCTTTTTCATCAAACT+CGG + Chr8:72932644-72932663 MsG0880046402.01.T01:intron 30.0%
!! ATTTTAATCCTCTTCCAAGA+CGG - Chr8:72933183-72933202 None:intergenic 30.0%
!! CTTACTGACTTAGCATTAAA+CGG - Chr8:72932688-72932707 None:intergenic 30.0%
!! CTTTCCTTGTTTCATTTTTC+AGG + Chr8:72934305-72934324 MsG0880046402.01.T01:intron 30.0%
!! CTTTTTGACTATGCTTTTGT+TGG + Chr8:72934353-72934372 MsG0880046402.01.T01:intron 30.0%
!! TGATGAAAAAGAGAGTATTG+TGG - Chr8:72932640-72932659 None:intergenic 30.0%
!!! ACATGGTTTTTTCTTGCATT+CGG - Chr8:72935070-72935089 None:intergenic 30.0%
!!! GTTGAGTTGGGAATTTATTT+TGG - Chr8:72934639-72934658 None:intergenic 30.0%
!!! TCATTGGACATTTTGACTAA+TGG + Chr8:72934950-72934969 MsG0880046402.01.T01:intron 30.0%
!!! TCTGACATGTCTTACTTTTT+TGG + Chr8:72936093-72936112 MsG0880046402.01.T01:intron 30.0%
AAGATGACCTCAACTTTGAA+AGG + Chr8:72935020-72935039 MsG0880046402.01.T01:intron 35.0%
AAGGAAATGTTCAGTAGACT+TGG - Chr8:72936310-72936329 None:intergenic 35.0%
AAGTCTACTGAACATTTCCT+TGG + Chr8:72936309-72936328 MsG0880046402.01.T01:CDS 35.0%
AATAGAATCAAACAGCCCAT+TGG - Chr8:72934105-72934124 None:intergenic 35.0%
AATGAGTGTGCACTATAGAA+GGG - Chr8:72934935-72934954 None:intergenic 35.0%
AATTATTAAAAAAGGCGGGG+GGG - Chr8:72935689-72935708 None:intergenic 35.0%
ACATGTATGTGTGTTTGACA+AGG + Chr8:72933932-72933951 MsG0880046402.01.T01:intron 35.0%
ACCATACATCCTAAACTAAC+AGG - Chr8:72934709-72934728 None:intergenic 35.0%
ACTTGTCTGAAAAAGAATCC+AGG + Chr8:72937203-72937222 MsG0880046402.01.T01:intron 35.0%
AGAAAATGAAGGAAGCTTGT+GGG + Chr8:72937387-72937406 MsG0880046402.01.T01:CDS 35.0%
AGACTAAATTGAAGACAGAG+CGG - Chr8:72932221-72932240 None:intergenic 35.0%
AGTGAACCAAAGTTGAAAAG+GGG - Chr8:72934903-72934922 None:intergenic 35.0%
ATGTCTCTTGTAAATAGGAC+CGG - Chr8:72933033-72933052 None:intergenic 35.0%
ATGTGTCTGTATAAGTGGAT+AGG - Chr8:72936831-72936850 None:intergenic 35.0%
CATTCTCTATTGCATAAAGG+AGG + Chr8:72937228-72937247 MsG0880046402.01.T01:intron 35.0%
CCACAACTCTGTATTTATAG+AGG + Chr8:72933287-72933306 MsG0880046402.01.T01:intron 35.0%
CCTCTATAAATACAGAGTTG+TGG - Chr8:72933290-72933309 None:intergenic 35.0%
CTAACTTAAATGATTGTGGG+AGG + Chr8:72932980-72932999 MsG0880046402.01.T01:intron 35.0%
CTAATAAGAAATTCCGGTTC+TGG + Chr8:72935993-72936012 MsG0880046402.01.T01:CDS 35.0%
CTAATAAGGCACAACATAAG+AGG - Chr8:72933208-72933227 None:intergenic 35.0%
CTCCTTTATGCAATAGAGAA+TGG - Chr8:72937230-72937249 None:intergenic 35.0%
CTGAAAATATGTCCTAGTGA+AGG - Chr8:72935763-72935782 None:intergenic 35.0%
CTGTTAGTCATAATTGACAC+CGG - Chr8:72935130-72935149 None:intergenic 35.0%
CTTCTTCTTTCAGCATATGT+TGG - Chr8:72934225-72934244 None:intergenic 35.0%
GAATTATTAAAAAAGGCGGG+GGG - Chr8:72935690-72935709 None:intergenic 35.0%
GTCAATTATGACTAACAGTC+AGG + Chr8:72935132-72935151 MsG0880046402.01.T01:intron 35.0%
GTCCATTCTCTATTGCATAA+AGG + Chr8:72937225-72937244 MsG0880046402.01.T01:intron 35.0%
GTCTTGGAAGAGGATTAAAA+TGG + Chr8:72933182-72933201 MsG0880046402.01.T01:intron 35.0%
GTGCGTATTGAATTATGCTT+GGG + Chr8:72932859-72932878 MsG0880046402.01.T01:intron 35.0%
TAACAACTATTTCACGGCAA+CGG - Chr8:72931932-72931951 None:intergenic 35.0%
TAATTCCTTAACTAGTGCCA+CGG - Chr8:72936540-72936559 None:intergenic 35.0%
TAGGCCTGAAAAATGAAACA+AGG - Chr8:72934312-72934331 None:intergenic 35.0%
TAGTGTTCCTATAATGTTGC+TGG + Chr8:72935492-72935511 MsG0880046402.01.T01:CDS 35.0%
TCAAATTTATCCATTGCCTC+AGG + Chr8:72935403-72935422 MsG0880046402.01.T01:intron 35.0%
TCAACAAAAGCGAATGTATC+TGG - Chr8:72933098-72933117 None:intergenic 35.0%
TGACAAAGAAACAGAAGATG+GGG + Chr8:72935893-72935912 MsG0880046402.01.T01:CDS 35.0%
TGCGTATTGAATTATGCTTG+GGG + Chr8:72932860-72932879 MsG0880046402.01.T01:intron 35.0%
TGTGCGTATTGAATTATGCT+TGG + Chr8:72932858-72932877 MsG0880046402.01.T01:intron 35.0%
TGTGTCTGTATAAGTGGATA+GGG - Chr8:72936830-72936849 None:intergenic 35.0%
TTAAAGTGATCTGAACCATG+AGG + Chr8:72935227-72935246 MsG0880046402.01.T01:intron 35.0%
TTACATGAATATCCAGTGCA+TGG - Chr8:72934043-72934062 None:intergenic 35.0%
TTGAACATAACAGCACCAAT+GGG + Chr8:72934087-72934106 MsG0880046402.01.T01:intron 35.0%
TTGTTTATCTGCTGAAAGGA+AGG - Chr8:72935542-72935561 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG + Chr8:72933126-72933145 MsG0880046402.01.T01:intron 35.0%
! AAACAAATAGGGTGTCAGAA+TGG - Chr8:72937060-72937079 None:intergenic 35.0%
! AACAAATAGGGTGTCAGAAT+GGG - Chr8:72937059-72937078 None:intergenic 35.0%
! AATTTTCCGCTCTCAAAACT+AGG + Chr8:72932712-72932731 MsG0880046402.01.T01:intron 35.0%
! AGACAATTTTGGATCAGAAG+AGG - Chr8:72935434-72935453 None:intergenic 35.0%
! AGTTGATGTCCTGTTAGTTT+AGG + Chr8:72934697-72934716 MsG0880046402.01.T01:intron 35.0%
! ATTTTCCGCTCTCAAAACTA+GGG + Chr8:72932713-72932732 MsG0880046402.01.T01:intron 35.0%
! CGACGAAGTTTGAAATTAAG+CGG - Chr8:72932480-72932499 None:intergenic 35.0%
! CTGCAGTTCTTTCTAAAGAT+AGG - Chr8:72937094-72937113 None:intergenic 35.0%
! TAGGACATATTTTCAGAGTG+AGG + Chr8:72935767-72935786 MsG0880046402.01.T01:CDS 35.0%
! TCCTGTTAGTTTAGGATGTA+TGG + Chr8:72934705-72934724 MsG0880046402.01.T01:intron 35.0%
! TCTCTGACATTTTCATACAG+AGG + Chr8:72933670-72933689 MsG0880046402.01.T01:intron 35.0%
! TTCTTGCCACAACTTTTATG+TGG - Chr8:72937440-72937459 None:intergenic 35.0%
! TTTTACCTGAATAACCGATG+CGG - Chr8:72937303-72937322 None:intergenic 35.0%
!! AAATGATTGTGGGAGGTATT+TGG + Chr8:72932987-72933006 MsG0880046402.01.T01:intron 35.0%
!! AATGCAGATAAGTGTTGAGT+TGG - Chr8:72934652-72934671 None:intergenic 35.0%
!! ACACATTTTAGTAACCCAAG+TGG - Chr8:72937163-72937182 None:intergenic 35.0%
!! ATGCAGATAAGTGTTGAGTT+GGG - Chr8:72934651-72934670 None:intergenic 35.0%
!! ATTTTGAGAACATCCAGAAC+CGG - Chr8:72936009-72936028 None:intergenic 35.0%
!!! GTTTCATTTTTCAGGCCTAA+TGG + Chr8:72934313-72934332 MsG0880046402.01.T01:intron 35.0%
!!! TGTCTTACTTTTTTGGTCTG+TGG + Chr8:72936100-72936119 MsG0880046402.01.T01:intron 35.0%
!!! TTGTGAAGGTTTTGGTTTCT+TGG + Chr8:72935718-72935737 MsG0880046402.01.T01:intron 35.0%
AAAATTGCGAGGGACTGAAT+TGG + Chr8:72933803-72933822 MsG0880046402.01.T01:intron 40.0%
AAAGTTGAAAAGGGGAAGAG+GGG - Chr8:72934895-72934914 None:intergenic 40.0%
AAATGTTAACTAGTGCCCCT+GGG - Chr8:72936677-72936696 None:intergenic 40.0%
AAATTGCGAGGGACTGAATT+GGG + Chr8:72933804-72933823 MsG0880046402.01.T01:intron 40.0%
AAGCAGCCACATAAAAGTTG+TGG + Chr8:72937431-72937450 MsG0880046402.01.T01:CDS 40.0%
AATTCCTTAACTAGTGCCAC+GGG - Chr8:72936539-72936558 None:intergenic 40.0%
ACTTCCTCCAGCAACATTAT+AGG - Chr8:72935502-72935521 None:intergenic 40.0%
AGACTTGGAAAGTCGGTTAT+GGG - Chr8:72936295-72936314 None:intergenic 40.0%
AGATCCTTCCTTATCGGATA+TGG + Chr8:72931729-72931748 MsG0880046402.01.T01:CDS 40.0%
ATCAGAAGAGGAAAAACCTG+AGG - Chr8:72935422-72935441 None:intergenic 40.0%
ATCTACAGTGAAAATGTCGG+CGG - Chr8:72931700-72931719 None:intergenic 40.0%
CAAAGTTGAAAAGGGGAAGA+GGG - Chr8:72934896-72934915 None:intergenic 40.0%
CAATGAGTGTGCACTATAGA+AGG - Chr8:72934936-72934955 None:intergenic 40.0%
CAATGCAGTACACAAGTTCT+CGG - Chr8:72934180-72934199 None:intergenic 40.0%
CCCATCTACAGTGAAAATGT+CGG - Chr8:72931703-72931722 None:intergenic 40.0%
CCCTCTGATACAATGAGTTA+CGG - Chr8:72933706-72933725 None:intergenic 40.0%
CCGTAACTCATTGTATCAGA+GGG + Chr8:72933703-72933722 MsG0880046402.01.T01:intron 40.0%
CTCAATTGAAAAGTTCCGAC+AGG + Chr8:72937324-72937343 MsG0880046402.01.T01:CDS 40.0%
CTGATGTCCTCATCATTTAC+AGG + Chr8:72936063-72936082 MsG0880046402.01.T01:CDS 40.0%
CTGCTTGTTTATCTGCTGAA+AGG - Chr8:72935546-72935565 None:intergenic 40.0%
CTTCAATGTGACTTTCACCA+AGG - Chr8:72936329-72936348 None:intergenic 40.0%
CTTCTATAGTGCACACTCAT+TGG + Chr8:72934934-72934953 MsG0880046402.01.T01:intron 40.0%
CTTGAACATAACAGCACCAA+TGG + Chr8:72934086-72934105 MsG0880046402.01.T01:intron 40.0%
GAGAAAATGAAGGAAGCTTG+TGG + Chr8:72937386-72937405 MsG0880046402.01.T01:CDS 40.0%
GAGAGAGAGAGAGAAGAAAA+GGG - Chr8:72931651-72931670 None:intergenic 40.0%
GCAACAATCAAACCTTCACT+AGG + Chr8:72935748-72935767 MsG0880046402.01.T01:CDS 40.0%
GTTCAGTAGACTTGGAAAGT+CGG - Chr8:72936302-72936321 None:intergenic 40.0%
TAATGGCGTTATGCCAAAGA+TGG - Chr8:72935938-72935957 None:intergenic 40.0%
TAGACTTGGAAAGTCGGTTA+TGG - Chr8:72936296-72936315 None:intergenic 40.0%
TATGAATTGCCACACAAGTG+AGG - Chr8:72935470-72935489 None:intergenic 40.0%
TATGCAATAGAGAATGGACC+TGG - Chr8:72937224-72937243 None:intergenic 40.0%
TATGCTGAAAGAAGAAGAGC+AGG + Chr8:72934228-72934247 MsG0880046402.01.T01:intron 40.0%
TCACCAAATCCATAGTGATG+CGG + Chr8:72937772-72937791 MsG0880046402.01.T01:CDS 40.0%
TCCGTAACTCATTGTATCAG+AGG + Chr8:72933702-72933721 MsG0880046402.01.T01:intron 40.0%
TGCATTCGGAGAACAAAGAA+TGG - Chr8:72935056-72935075 None:intergenic 40.0%
TGTTCCTATAATGTTGCTGG+AGG + Chr8:72935495-72935514 MsG0880046402.01.T01:CDS 40.0%
TTAACTTCAGAGCAGTGTCA+GGG - Chr8:72937553-72937572 None:intergenic 40.0%
TTATGACTAACAGTCAGGCT+TGG + Chr8:72935137-72935156 MsG0880046402.01.T01:intron 40.0%
TTGAATGAACTCGGACCAAA+TGG - Chr8:72935831-72935850 None:intergenic 40.0%
TTGCACCATTGTTGCATGAA+TGG + Chr8:72937275-72937294 MsG0880046402.01.T01:intron 40.0%
TTGGTCCGAGTTCATTCAAT+AGG + Chr8:72935832-72935851 MsG0880046402.01.T01:CDS 40.0%
TTGTCATGGAATCAACCTCA+TGG - Chr8:72935245-72935264 None:intergenic 40.0%
TTGTCCTATTCCTCATCTTC+TGG + Chr8:72937464-72937483 MsG0880046402.01.T01:CDS 40.0%
! ACATTTTCACTGTAGATGGG+AGG + Chr8:72931703-72931722 MsG0880046402.01.T01:CDS 40.0%
! ACTTTTGGATCCAGAAGATG+AGG - Chr8:72937477-72937496 None:intergenic 40.0%
! AGTCCTTCACAATTTTCTCG+CGG + Chr8:72933607-72933626 MsG0880046402.01.T01:intron 40.0%
! CCGACATTTTCACTGTAGAT+GGG + Chr8:72931700-72931719 MsG0880046402.01.T01:CDS 40.0%
! CTCATACTTGCTCACACTTT+TGG - Chr8:72937492-72937511 None:intergenic 40.0%
! GATTTGGATTACCTGGTTCT+TGG + Chr8:72937677-72937696 MsG0880046402.01.T01:CDS 40.0%
! TTTTTGTTAGGGGCTGAGTT+GGG + Chr8:72933773-72933792 MsG0880046402.01.T01:intron 40.0%
!! CATCAGCCAAGAATTTTAGC+TGG - Chr8:72936049-72936068 None:intergenic 40.0%
!! GAATTTGCTGCATGAAGTCT+TGG - Chr8:72937584-72937603 None:intergenic 40.0%
!!! AAGGTTTTGGTTTCTTGGCT+TGG + Chr8:72935723-72935742 MsG0880046402.01.T01:intron 40.0%
!!! ATGATCCCTAGTTTTGAGAG+CGG - Chr8:72932721-72932740 None:intergenic 40.0%
!!! GCATGGCTAATGTTTTTAGC+TGG - Chr8:72937835-72937854 None:intergenic 40.0%
!!! TAGGCACTGATTTTCCTGTA+CGG + Chr8:72934583-72934602 MsG0880046402.01.T01:intron 40.0%
!!! TTTTTTGTTAGGGGCTGAGT+TGG + Chr8:72933772-72933791 MsG0880046402.01.T01:intron 40.0%
AAGAACAAGCCTCACTTGTG+TGG + Chr8:72935458-72935477 MsG0880046402.01.T01:CDS 45.0%
AATGTTAACTAGTGCCCCTG+GGG - Chr8:72936676-72936695 None:intergenic 45.0%
AATTCCTTAACTAGTGCCCC+AGG + Chr8:72936657-72936676 MsG0880046402.01.T01:intron 45.0%
ACACTTCTTGGATGAGCTGA+TGG + Chr8:72934127-72934146 MsG0880046402.01.T01:CDS 45.0%
ACATATGCTGCAAGTCCTGT+CGG - Chr8:72937342-72937361 None:intergenic 45.0%
ACTATTTCACGGCAACGGTT+TGG - Chr8:72931927-72931946 None:intergenic 45.0%
ACTCGTGAAAATGACCATGC+CGG + Chr8:72935108-72935127 MsG0880046402.01.T01:intron 45.0%
AGAGGAAAAACCTGAGGCAA+TGG - Chr8:72935416-72935435 None:intergenic 45.0%
AGCATGCATATGATGCCACT+TGG + Chr8:72937145-72937164 MsG0880046402.01.T01:intron 45.0%
AGGAGAGGAAAACGATGTGA+TGG + Chr8:72931758-72931777 MsG0880046402.01.T01:CDS 45.0%
AGGAGGAGATCCTTCCTTAT+CGG + Chr8:72931723-72931742 MsG0880046402.01.T01:CDS 45.0%
AGTCATAATTGACACCGGCA+TGG - Chr8:72935125-72935144 None:intergenic 45.0%
ATTCCTTAACTAGTGCCACG+GGG - Chr8:72936538-72936557 None:intergenic 45.0%
ATTCCTTAACTAGTGCCCCA+GGG + Chr8:72936658-72936677 MsG0880046402.01.T01:intron 45.0%
CACTTCTTGGATGAGCTGAT+GGG + Chr8:72934128-72934147 MsG0880046402.01.T01:CDS 45.0%
CCAAAGTTGAAAAGGGGAAG+AGG - Chr8:72934897-72934916 None:intergenic 45.0%
CGGAACCATTCATGCAACAA+TGG - Chr8:72937283-72937302 None:intergenic 45.0%
CTAAATTGAAGACAGAGCGG+TGG - Chr8:72932218-72932237 None:intergenic 45.0%
CTCTTCCTCCATATCCGATA+AGG - Chr8:72931740-72931759 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+AGG - Chr8:72933029-72933048 None:intergenic 45.0%
CTTAACTTCAGAGCAGTGTC+AGG - Chr8:72937554-72937573 None:intergenic 45.0%
CTTATCGGATATGGAGGAAG+AGG + Chr8:72931738-72931757 MsG0880046402.01.T01:CDS 45.0%
CTTGGCTCATCTCAGTTAGA+GGG + Chr8:72937695-72937714 MsG0880046402.01.T01:CDS 45.0%
GAAAGGAAGGATACCATCCA+TGG - Chr8:72935529-72935548 None:intergenic 45.0%
GAAATGTTAACTAGTGCCCC+TGG - Chr8:72936678-72936697 None:intergenic 45.0%
GCAGATTATCTTCCATGCAC+TGG + Chr8:72934028-72934047 MsG0880046402.01.T01:intron 45.0%
GGAAATAGTGTTCCCAGCTT+TGG + Chr8:72937799-72937818 MsG0880046402.01.T01:CDS 45.0%
GGAGAGAGAGAGAGAAGAAA+AGG - Chr8:72931652-72931671 None:intergenic 45.0%
GGATCCAGAAGATGAGGAAT+AGG - Chr8:72937471-72937490 None:intergenic 45.0%
GGTTTCAAAACCCCAACATG+TGG - Chr8:72936758-72936777 None:intergenic 45.0%
GTAGGAATCCATGAGAACCT+TGG - Chr8:72935797-72935816 None:intergenic 45.0%
TAAGCGCACACACAAGAGAA+AGG - Chr8:72935167-72935186 None:intergenic 45.0%
TAGACACACACATTCCGTAC+AGG - Chr8:72934600-72934619 None:intergenic 45.0%
TATGAGACACCATACTCCAC+AGG + Chr8:72937506-72937525 MsG0880046402.01.T01:CDS 45.0%
TATTGGTCAAGTCACCGTCT+TGG + Chr8:72933166-72933185 MsG0880046402.01.T01:intron 45.0%
TCCTCCATATCCGATAAGGA+AGG - Chr8:72931736-72931755 None:intergenic 45.0%
TCCTTCCTTATCGGATATGG+AGG + Chr8:72931732-72931751 MsG0880046402.01.T01:CDS 45.0%
TCTTGGCTCATCTCAGTTAG+AGG + Chr8:72937694-72937713 MsG0880046402.01.T01:CDS 45.0%
TTGCATGAATGGTTCCGCAT+CGG + Chr8:72937286-72937305 MsG0880046402.01.T01:intron 45.0%
TTGGCTCATCTCAGTTAGAG+GGG + Chr8:72937696-72937715 MsG0880046402.01.T01:CDS 45.0%
TTTCAGAGTGAGGAACTCCA+AGG + Chr8:72935777-72935796 MsG0880046402.01.T01:CDS 45.0%
! AATAGTGTTCCCAGCTTTGG+AGG + Chr8:72937802-72937821 MsG0880046402.01.T01:CDS 45.0%
! ACGGTTTGGATCATGTTCCA+AGG - Chr8:72931913-72931932 None:intergenic 45.0%
! CAGCATATGTTGGTAGACTG+AGG - Chr8:72934215-72934234 None:intergenic 45.0%
! CCTCTTCCCCTTTTCAACTT+TGG + Chr8:72934894-72934913 MsG0880046402.01.T01:intron 45.0%
! CTTGGGGTCACAAGCATTTT+TGG + Chr8:72932876-72932895 MsG0880046402.01.T01:intron 45.0%
! GCATGCATATGATGCCACTT+GGG + Chr8:72937146-72937165 MsG0880046402.01.T01:intron 45.0%
! GCCGACATTTTCACTGTAGA+TGG + Chr8:72931699-72931718 MsG0880046402.01.T01:CDS 45.0%
! GTTAGAGGGGCATGATGATT+TGG + Chr8:72937709-72937728 MsG0880046402.01.T01:CDS 45.0%
! TCAGGCCTAATGGATCAATG+TGG + Chr8:72934323-72934342 MsG0880046402.01.T01:intron 45.0%
! TTTTCACTGTAGATGGGAGG+AGG + Chr8:72931706-72931725 MsG0880046402.01.T01:CDS 45.0%
!! TTATTATATTTATAATGTTT+AGG + Chr8:72932373-72932392 MsG0880046402.01.T01:intron 5.0%
AATCCATAGTGATGCGGAGG+AGG + Chr8:72937778-72937797 MsG0880046402.01.T01:CDS 50.0%
ACTGAGATGAGCCAAGAACC+AGG - Chr8:72937691-72937710 None:intergenic 50.0%
CAAGTTCAGAACGCAGAGCT+TGG - Chr8:72931857-72931876 None:intergenic 50.0%
CACAAGTTCTCGGAACAGCT+TGG - Chr8:72934170-72934189 None:intergenic 50.0%
CCAAATCCATAGTGATGCGG+AGG + Chr8:72937775-72937794 MsG0880046402.01.T01:CDS 50.0%
CCTCCGCATCACTATGGATT+TGG - Chr8:72937778-72937797 None:intergenic 50.0%
GACGACGCAGTTTCAGCAAA+CGG - Chr8:72931891-72931910 None:intergenic 50.0%
GAGGAACTCCAAGGTTCTCA+TGG + Chr8:72935786-72935805 MsG0880046402.01.T01:CDS 50.0%
GGACCGCGAGAAAATTGTGA+AGG - Chr8:72933613-72933632 None:intergenic 50.0%
GGGCAGTGAGAAAATTGCGA+GGG + Chr8:72933793-72933812 MsG0880046402.01.T01:intron 50.0%
GTCAGTAACCCCATCAACGA+GGG - Chr8:72931678-72931697 None:intergenic 50.0%
TCAAGTCACCGTCTTGGAAG+AGG + Chr8:72933172-72933191 MsG0880046402.01.T01:intron 50.0%
TCATTGCGCTGCTGAAGATG+AGG + Chr8:72931994-72932013 MsG0880046402.01.T01:CDS 50.0%
TGAAAAGGGGAAGAGGGGAT+GGG - Chr8:72934890-72934909 None:intergenic 50.0%
TGGGCAGTGAGAAAATTGCG+AGG + Chr8:72933792-72933811 MsG0880046402.01.T01:intron 50.0%
TTCCTTAACTAGTGCCACGG+GGG - Chr8:72936537-72936556 None:intergenic 50.0%
TTCCTTAACTAGTGCCCCAG+GGG + Chr8:72936659-72936678 MsG0880046402.01.T01:intron 50.0%
TTGAAAAGGGGAAGAGGGGA+TGG - Chr8:72934891-72934910 None:intergenic 50.0%
TTTCCTCCTCCGCATCACTA+TGG - Chr8:72937784-72937803 None:intergenic 50.0%
! GGAGGAAGTTTTGCCATGGA+TGG + Chr8:72935513-72935532 MsG0880046402.01.T01:CDS 50.0%
! TGCTGGAGGAAGTTTTGCCA+TGG + Chr8:72935509-72935528 MsG0880046402.01.T01:CDS 50.0%
!! TGGTTCCGCATCGGTTATTC+AGG + Chr8:72937295-72937314 MsG0880046402.01.T01:intron 50.0%
!! TTCCCAGCTTTGGAGGCAAT+AGG + Chr8:72937809-72937828 MsG0880046402.01.T01:CDS 50.0%
AGTAACCCCATCAACGAGGG+CGG - Chr8:72931675-72931694 None:intergenic 55.0%
CGGATATGGAGGAAGAGGAG+AGG + Chr8:72931743-72931762 MsG0880046402.01.T01:CDS 55.0%
GGCCTATTGCCTCCAAAGCT+GGG - Chr8:72937814-72937833 None:intergenic 55.0%
GGTCAGTAACCCCATCAACG+AGG - Chr8:72931679-72931698 None:intergenic 55.0%
GTTCAGAACGCAGAGCTTGG+TGG - Chr8:72931854-72931873 None:intergenic 55.0%
TGCTGAAACTGCGTCGTCCT+TGG + Chr8:72931893-72931912 MsG0880046402.01.T01:CDS 55.0%
TGGCCTATTGCCTCCAAAGC+TGG - Chr8:72937815-72937834 None:intergenic 55.0%
CATGTTAACCAGTGCCCCCG+TGG + Chr8:72936520-72936539 MsG0880046402.01.T01:intron 60.0%
GTAACCCCATCAACGAGGGC+GGG - Chr8:72931674-72931693 None:intergenic 60.0%
TAACCCCATCAACGAGGGCG+GGG - Chr8:72931673-72931692 None:intergenic 60.0%
TGCCCCCGTGGCACTAGTTA+AGG + Chr8:72936532-72936551 MsG0880046402.01.T01:intron 60.0%
! TGCCCCTGGGGCACTAGTTA+AGG - Chr8:72936664-72936683 None:intergenic 60.0%
CTCTCCCCGCCCTCGTTGAT+GGG + Chr8:72931666-72931685 MsG0880046402.01.T01:exon 65.0%
TCTCCCCGCCCTCGTTGATG+GGG + Chr8:72931667-72931686 MsG0880046402.01.T01:exon 65.0%
TCTCTCCCCGCCCTCGTTGA+TGG + Chr8:72931665-72931684 MsG0880046402.01.T01:exon 65.0%
! AACTAGTGCCACGGGGGCAC+TGG - Chr8:72936531-72936550 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 72931605 72937865 72931605 ID=MsG0880046402.01;Name=MsG0880046402.01
Chr8 mRNA 72931605 72937865 72931605 ID=MsG0880046402.01.T01;Parent=MsG0880046402.01;Name=MsG0880046402.01.T01;_AED=0.40;_eAED=0.40;_QI=79|0.4|0.5|1|1|1|6|0|573
Chr8 exon 72931605 72932015 72931605 ID=MsG0880046402.01.T01:exon:18865;Parent=MsG0880046402.01.T01
Chr8 exon 72934100 72934155 72934100 ID=MsG0880046402.01.T01:exon:18866;Parent=MsG0880046402.01.T01
Chr8 exon 72935425 72935618 72935425 ID=MsG0880046402.01.T01:exon:18867;Parent=MsG0880046402.01.T01
Chr8 exon 72935726 72936084 72935726 ID=MsG0880046402.01.T01:exon:18868;Parent=MsG0880046402.01.T01
Chr8 exon 72936248 72936479 72936248 ID=MsG0880046402.01.T01:exon:18869;Parent=MsG0880046402.01.T01
Chr8 exon 72937317 72937865 72937317 ID=MsG0880046402.01.T01:exon:18870;Parent=MsG0880046402.01.T01
Chr8 five_prime_UTR 72931605 72931683 72931605 ID=MsG0880046402.01.T01:five_prime_utr;Parent=MsG0880046402.01.T01
Chr8 CDS 72931684 72932015 72931684 ID=MsG0880046402.01.T01:cds;Parent=MsG0880046402.01.T01
Chr8 CDS 72934100 72934155 72934100 ID=MsG0880046402.01.T01:cds;Parent=MsG0880046402.01.T01
Chr8 CDS 72935425 72935618 72935425 ID=MsG0880046402.01.T01:cds;Parent=MsG0880046402.01.T01
Chr8 CDS 72935726 72936084 72935726 ID=MsG0880046402.01.T01:cds;Parent=MsG0880046402.01.T01
Chr8 CDS 72936248 72936479 72936248 ID=MsG0880046402.01.T01:cds;Parent=MsG0880046402.01.T01
Chr8 CDS 72937317 72937865 72937317 ID=MsG0880046402.01.T01:cds;Parent=MsG0880046402.01.T01
Gene Sequence

>MsG0880046402.01.T01

ATGGGGTTACTGACCGCCGACATTTTCACTGTAGATGGGAGGAGGAGATCCTTCCTTATCGGATATGGAGGAAGAGGAGAGGAAAACGATGTGATGGTGAACGATTCAGTTGACATTCTTTCTCGTTTTCAAATCTTCGATGCTCCTATACTTCTCTTCGTTTGTTTCCACCAAGCTCTGCGTTCTGAACTTGATCAGCTTCGTCCGTTTGCTGAAACTGCGTCGTCCTTGGAACATGATCCAAACCGTTGCCGTGAAATAGTTGTTAAGCTTCATCAGAGATTTCAGTTTTTGAAATTAGCTTTTAGTATCATTGCGCTGCTGAAGATGAGCACCAATGGGCTGTTTGATTCTATTTTACACTTCTTGGATGAGCTGATGGGCTCTAGTTTTTCCTCTTCTGATCCAAAATTGTCTGCTAAAGAACAAGCCTCACTTGTGTGGCAATTCATATGTAGTGTTCCTATAATGTTGCTGGAGGAAGTTTTGCCATGGATGGTATCCTTCCTTTCAGCAGATAAACAAGCAGAAGTTACTCAGTGTTTTAATGAAATTGCACCAATGGAAACAACACTGCAAGAGGTTTTGGTTTCTTGGCTTGGAAGCAACAATCAAACCTTCACTAGGACATATTTTCAGAGTGAGGAACTCCAAGGTTCTCATGGATTCCTACATATAGAAAAACCATTTGGTCCGAGTTCATTCAATAGGAACTACTCAAAAGAAATTTCGAGTCAGACGAAAGTGAATGACAAAGAAACAGAAGATGGGGTCAACCAGATTAAAGTTCTCCATCTTTGGCATAACGCCATTAAGAAAGATTTGAAAGAAATTCTGCAAGAGCTTTATCTAATAAGAAATTCCGGTTCTGGATGTTCTCAAAATTTAGACTCAATACTTATCCAGCTAAAATTCTTGGCTGATGTCCTCATCATTTACAGCAATGCTCTTAAGAAATTCTTTCATCTTGTACTGAACAAACATGCCCATAACCGACTTTCCAAGTCTACTGAACATTTCCTTGGTGAAAGTCACATTGAAGATTTACAACAGTTGCTATTCTATAACTCAGAAAGTGAAATGCCTTTGACAAAATTTGTAGAGAAGCTTTGCGGAAAACTTGAATTATTTGTATCAACAGTCAACAAACAATTCTCTTTTCAAGAAATTGAGGTAAAAACTCAATTGAAAAGTTCCGACAGGACTTGCAGCATATGTTCAAAAGAACACTCTTTTTCATCTGAGAAAATGAAGGAAGCTTGTGGGTTTTCATTTTTAAATTCTGACAAGCAGCCACATAAAAGTTGTGGCAAGAATTGTTTGTCCTATTCCTCATCTTCTGGATCCAAAAGTGTGAGCAAGTATGAGACACCATACTCCACAGGAATTAATTTGCACATATTTTTCCCTGACACTGCTCTGAAGTTAAGTCAGCATCCAAGACTTCATGCAGCAAATTCTTCTTCTGTTTCATTTCTTAATGATCCAAAACCAATTGACCTGATATTTTTCTTTCACAAGGCTATTAAGAAAGATTTGGATTACCTGGTTCTTGGCTCATCTCAGTTAGAGGGGCATGATGATTTGGTTACAGATTTCCAAAAACGGTTCAATCTCATATATTTTCTTCACCAAATCCATAGTGATGCGGAGGAGGAAATAGTGTTCCCAGCTTTGGAGGCAATAGGCCAGCTAAAAACATTAGCCATGCCTACACTTTGA

Protein sequence

>MsG0880046402.01.T01

MGLLTADIFTVDGRRRSFLIGYGGRGEENDVMVNDSVDILSRFQIFDAPILLFVCFHQALRSELDQLRPFAETASSLEHDPNRCREIVVKLHQRFQFLKLAFSIIALLKMSTNGLFDSILHFLDELMGSSFSSSDPKLSAKEQASLVWQFICSVPIMLLEEVLPWMVSFLSADKQAEVTQCFNEIAPMETTLQEVLVSWLGSNNQTFTRTYFQSEELQGSHGFLHIEKPFGPSSFNRNYSKEISSQTKVNDKETEDGVNQIKVLHLWHNAIKKDLKEILQELYLIRNSGSGCSQNLDSILIQLKFLADVLIIYSNALKKFFHLVLNKHAHNRLSKSTEHFLGESHIEDLQQLLFYNSESEMPLTKFVEKLCGKLELFVSTVNKQFSFQEIEVKTQLKSSDRTCSICSKEHSFSSEKMKEACGFSFLNSDKQPHKSCGKNCLSYSSSSGSKSVSKYETPYSTGINLHIFFPDTALKLSQHPRLHAANSSSVSFLNDPKPIDLIFFFHKAIKKDLDYLVLGSSQLEGHDDLVTDFQKRFNLIYFLHQIHSDAEEEIVFPALEAIGQLKTLAMPTL*