AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003908.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003908.01.T01 MTR_1g070840 97.753 178 4 0 1 178 114 291 9.56e-132 370
MsG0180003908.01.T01 MTR_1g021080 41.818 165 79 5 3 165 112 261 6.32e-38 131
MsG0180003908.01.T01 MTR_6g092780 62.500 48 16 1 97 144 422 467 1.48e-14 70.9
MsG0180003908.01.T01 MTR_6g092780 44.118 68 36 1 97 164 351 416 4.65e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003908.01.T01 AT1G47720 36.196 163 95 3 4 164 98 253 1.36e-26 102
MsG0180003908.01.T01 AT4G20010 32.919 161 92 4 3 153 139 293 6.04e-19 83.2
MsG0180003908.01.T01 AT4G20010 50.820 61 28 1 97 157 310 368 4.04e-13 66.6
MsG0180003908.01.T01 AT4G20010 34.568 162 88 6 3 153 139 293 2.21e-18 81.6
MsG0180003908.01.T01 AT4G20010 50.820 61 28 1 97 157 310 368 4.07e-13 66.6
MsG0180003908.01.T01 AT5G44785 32.026 153 98 2 3 151 122 272 3.38e-16 75.9
MsG0180003908.01.T01 AT5G44785 58.182 55 21 1 97 151 380 432 8.51e-15 71.6
MsG0180003908.01.T01 AT5G44785 32.026 153 98 2 3 151 122 272 3.54e-16 75.5
MsG0180003908.01.T01 AT5G44785 58.182 55 21 1 97 151 378 430 8.82e-15 71.6
MsG0180003908.01.T01 AT1G31010 25.989 177 105 5 3 161 120 288 1.65e-11 62.0

Find 68 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGGATTCATTTGACATTT+TGG 0.051547 1:-69982156 MsG0180003908.01.T01:CDS
GGTCATCAGATTCATGTTTC+TGG 0.230684 1:-69982094 MsG0180003908.01.T01:CDS
TGCTTAAAATCAGGAGCTTT+GGG 0.254926 1:+69977906 None:intergenic
AACTGCACAAAGAAGTTTCT+AGG 0.297736 1:+69977682 None:intergenic
GATACTGTTGATTCTCTTGA+TGG 0.323867 1:-69982058 MsG0180003908.01.T01:CDS
ATTTGTAGAACCAAAATTTA+CGG 0.326329 1:+69977649 None:intergenic
GTGCTTAAAATCAGGAGCTT+TGG 0.338408 1:+69977905 None:intergenic
CAAACAACAAACTTACTATA+AGG 0.360042 1:-69982035 MsG0180003908.01.T01:intron
CAGATATTGATACTTTAATC+TGG 0.366821 1:-69977523 MsG0180003908.01.T01:three_prime_UTR
CTTCCGGGAAAGTTGTTGCT+TGG 0.369233 1:-69982216 None:intergenic
CTATTGTCCCACCACTCCCC+TGG 0.369869 1:+69981373 None:intergenic
TTTGTAGAACCAAAATTTAC+GGG 0.371024 1:+69977650 None:intergenic
AAGAAGTTTCTAGGTTGAAA+TGG 0.372283 1:+69977691 None:intergenic
CAGGGGAGTGGTGGGACAAT+AGG 0.384072 1:-69981372 MsG0180003908.01.T01:CDS
GGGTCTTATACCGGTCAAAA+TGG 0.387486 1:-69977795 MsG0180003908.01.T01:CDS
ACATTACATTGGGCAAGGTT+TGG 0.401166 1:+69977715 None:intergenic
CATGTCTAATATTTCCAGTT+GGG 0.406821 1:+69977824 None:intergenic
GTATCTTTGTGCTTAAAATC+AGG 0.409234 1:+69977897 None:intergenic
TGGTAGGATGCCCGTAGATA+TGG 0.414708 1:-69977775 MsG0180003908.01.T01:CDS
AGTCCAAGCAACAACTTTCC+CGG 0.430883 1:+69982213 None:intergenic
GGGACATTGTTTATAGTCTC+TGG 0.430971 1:-69977625 MsG0180003908.01.T01:three_prime_UTR
AGCAGCTGAATTTCATTGAT+AGG 0.434295 1:-69981912 MsG0180003908.01.T01:CDS
GGAGAAGCTCTGTGGATTGA+TGG 0.439305 1:-69977873 MsG0180003908.01.T01:CDS
CTGGTTCTGTGGTGGAATTA+TGG 0.451490 1:-69981414 MsG0180003908.01.T01:CDS
TTGCCAACCCAGGGGAGTGG+TGG 0.459728 1:-69981381 MsG0180003908.01.T01:CDS
TCCAGTTGGGATTTGACCCA+TGG 0.465033 1:+69977837 None:intergenic
ACCATGGGTCAAATCCCAAC+TGG 0.466020 1:-69977838 MsG0180003908.01.T01:CDS
CAAGCTTTCTTTGCCAACCC+AGG 0.471812 1:-69981391 MsG0180003908.01.T01:CDS
TTGAAATGGAACATTACATT+GGG 0.476213 1:+69977705 None:intergenic
TCTTTGCCAACCCAGGGGAG+TGG 0.478438 1:-69981384 MsG0180003908.01.T01:CDS
TATTGTCCCACCACTCCCCT+GGG 0.482045 1:+69981374 None:intergenic
ATCTGCGCTCACCATATCTA+CGG 0.486147 1:+69977764 None:intergenic
AATTCTAAACAATGGTAGCC+AGG 0.505181 1:+69977564 None:intergenic
TATGCTTCAAATGGTATGAC+TGG 0.505920 1:-69981433 MsG0180003908.01.T01:CDS
AAGGCGAGTTATGCTTCAAA+TGG 0.511136 1:-69981442 MsG0180003908.01.T01:CDS
AAGCTTTCTTTGCCAACCCA+GGG 0.515795 1:-69981390 MsG0180003908.01.T01:CDS
ATGAGGATGGGGTCTTATAC+CGG 0.520447 1:-69977804 MsG0180003908.01.T01:CDS
TCATGTCTAATATTTCCAGT+TGG 0.522776 1:+69977823 None:intergenic
ATCAGATTCATGTTTCTGGT+CGG 0.524990 1:-69982090 MsG0180003908.01.T01:CDS
GGGAGTGGTGGGACAATAGG+AGG 0.525627 1:-69981369 MsG0180003908.01.T01:CDS
GTCCCACCACTCCCCTGGGT+TGG 0.526435 1:+69981378 None:intergenic
TGTTATTGTTTCAGGCAAGA+AGG 0.526995 1:-69981461 MsG0180003908.01.T01:intron
ATGGAACATTACATTGGGCA+AGG 0.536143 1:+69977710 None:intergenic
GAAATATTAGACATGAGGAT+GGG 0.536442 1:-69977816 MsG0180003908.01.T01:CDS
GCTTCTCAACATGTTCAGAA+AGG 0.542292 1:-69982115 MsG0180003908.01.T01:CDS
CTTATACCGGTCAAAATGGT+AGG 0.543946 1:-69977791 MsG0180003908.01.T01:CDS
CATTGATAGGAGTGACGCGC+CGG 0.549062 1:-69981899 MsG0180003908.01.T01:CDS
GTTGAAATGGAACATTACAT+TGG 0.549390 1:+69977704 None:intergenic
GGAAATATTAGACATGAGGA+TGG 0.554921 1:-69977817 MsG0180003908.01.T01:CDS
TGCCAACCCAGGGGAGTGGT+GGG 0.556445 1:-69981380 MsG0180003908.01.T01:CDS
AGTTGGGATTTGACCCATGG+TGG 0.556762 1:+69977840 None:intergenic
GGATTTGACCCATGGTGGAG+TGG 0.565295 1:+69977845 None:intergenic
AAATGGTATGACTGGTTCTG+TGG 0.565847 1:-69981425 MsG0180003908.01.T01:CDS
TGAACAGGTAGGATCACTCT+TGG 0.571670 1:+69977491 None:intergenic
TGGTAGATCCACTCCACCAT+GGG 0.571714 1:-69977853 MsG0180003908.01.T01:CDS
TCTGCGCTCACCATATCTAC+GGG 0.572725 1:+69977765 None:intergenic
GCTTAAAATCAGGAGCTTTG+GGG 0.595796 1:+69977907 None:intergenic
AAAACGCTTCGCAAATGTCG+TGG 0.597891 1:-69982174 MsG0180003908.01.T01:exon
TCTTGATCATGTGACCGCAC+CGG 0.610253 1:+69981880 None:intergenic
AAATATTAGACATGAGGATG+GGG 0.613312 1:-69977815 MsG0180003908.01.T01:CDS
AACTGGAAATATTAGACATG+AGG 0.632652 1:-69977821 MsG0180003908.01.T01:CDS
ATGGTAGATCCACTCCACCA+TGG 0.638276 1:-69977854 MsG0180003908.01.T01:CDS
TGGTATGACTGGTTCTGTGG+TGG 0.639075 1:-69981422 MsG0180003908.01.T01:CDS
TTCATTATGTCTGATGACAA+TGG 0.656636 1:-69981850 MsG0180003908.01.T01:intron
AGCTTTCTTTGCCAACCCAG+GGG 0.662573 1:-69981389 MsG0180003908.01.T01:CDS
AAGATACTGGAGAAGCTCTG+TGG 0.678600 1:-69977881 MsG0180003908.01.T01:CDS
ATAGGAGTGACGCGCCGGTG+CGG 0.681821 1:-69981894 MsG0180003908.01.T01:CDS
GTGGGACAATAGGAGGAACA+AGG 0.691913 1:-69981362 MsG0180003908.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTAAATTGAATAATAAAA+TGG - Chr1:69979184-69979203 MsG0180003908.01.T01:intron 10.0%
!! ACTAAATTGAATAATAAAAT+GGG - Chr1:69979185-69979204 MsG0180003908.01.T01:intron 10.0%
!! TATTAAAACTTATAATTAGA+TGG - Chr1:69981269-69981288 MsG0180003908.01.T01:intron 10.0%
!!! CAATTTTTTATAAAATGAAA+TGG + Chr1:69981731-69981750 None:intergenic 10.0%
!!! TCATTAATTCTTTAAAAAAA+TGG + Chr1:69979225-69979244 None:intergenic 10.0%
!! AAAAATCTAATTCTAAACAA+TGG + Chr1:69982163-69982182 None:intergenic 15.0%
!! AAGAGATATTAAAATAATCT+TGG + Chr1:69979893-69979912 None:intergenic 15.0%
!! ACAATATTCAATTTACATAT+TGG + Chr1:69979434-69979453 None:intergenic 15.0%
!! AGAAAGATACAATAAATAAA+TGG - Chr1:69980836-69980855 MsG0180003908.01.T01:intron 15.0%
!! ATATGAAAAAAAACAATTTG+AGG + Chr1:69978641-69978660 None:intergenic 15.0%
!! TATGAAAAAAAACAATTTGA+GGG + Chr1:69978640-69978659 None:intergenic 15.0%
!! TTTAAAGAATTAATGAACAA+TGG - Chr1:69979229-69979248 MsG0180003908.01.T01:intron 15.0%
!! TTTAAATAACTTATCCATTA+AGG - Chr1:69979673-69979692 MsG0180003908.01.T01:intron 15.0%
!!! ATTGTTTAGAATTAGATTTT+TGG - Chr1:69982162-69982181 MsG0180003908.01.T01:CDS 15.0%
!!! GAATAATTATAAGTTTTTAG+GGG + Chr1:69981219-69981238 None:intergenic 15.0%
!!! GGAATAATTATAAGTTTTTA+GGG + Chr1:69981220-69981239 None:intergenic 15.0%
!!! TAATTTTTGCTTTGTTTTTT+TGG - Chr1:69977708-69977727 MsG0180003908.01.T01:three_prime_UTR 15.0%
!!! TATCAATATGTTGATTTTTT+TGG - Chr1:69978841-69978860 MsG0180003908.01.T01:intron 15.0%
!!! TGGAATAATTATAAGTTTTT+AGG + Chr1:69979873-69979892 None:intergenic 15.0%
!!! TTATATATTAAGTGTACTTT+TGG - Chr1:69977893-69977912 MsG0180003908.01.T01:CDS 15.0%
!!! TTTTATTTATATAACGATCT+GGG + Chr1:69980214-69980233 None:intergenic 15.0%
!!! TTTTTATTTATATAACGATC+TGG + Chr1:69980215-69980234 None:intergenic 15.0%
!!! TTTTTTATAAAATGAAATGG+AGG + Chr1:69981728-69981747 None:intergenic 15.0%
!! AAGAGATATTAAAACAGTAT+TGG + Chr1:69981241-69981260 None:intergenic 20.0%
!! AAGTTGAATTAAATGTAAAG+TGG - Chr1:69977961-69977980 MsG0180003908.01.T01:intron 20.0%
!! AGTTGAATTAAATGTAAAGT+GGG - Chr1:69977962-69977981 MsG0180003908.01.T01:intron 20.0%
!! ATTTGTAGAACCAAAATTTA+CGG + Chr1:69982070-69982089 None:intergenic 20.0%
!! TAAAAAAGAAATGAAGGAAA+CGG + Chr1:69980293-69980312 None:intergenic 20.0%
!! TATCTTCAAATTATCAATTC+TGG - Chr1:69978068-69978087 MsG0180003908.01.T01:intron 20.0%
!! TATTACACTAATGAATTCTA+TGG - Chr1:69978911-69978930 MsG0180003908.01.T01:intron 20.0%
!! TCATTAGTGTAATAACAAAA+CGG + Chr1:69978905-69978924 None:intergenic 20.0%
!! TGCAAAAAAATAAAATTAGG+AGG + Chr1:69978691-69978710 None:intergenic 20.0%
!! TGGTGCAAAAAAATAAAATT+AGG + Chr1:69978694-69978713 None:intergenic 20.0%
!! TTCAAAATGCAAAAACAATA+GGG + Chr1:69978668-69978687 None:intergenic 20.0%
!! TTTATATAGTCAAAATTGAG+TGG - Chr1:69978879-69978898 MsG0180003908.01.T01:intron 20.0%
!!! AAATTCTGTTCAAATTTTAC+AGG + Chr1:69978162-69978181 None:intergenic 20.0%
!!! AAATTTTGGTTCTACAAATA+GGG - Chr1:69982071-69982090 MsG0180003908.01.T01:CDS 20.0%
!!! AATAATTTCTTTTCTGAACA+AGG - Chr1:69980015-69980034 MsG0180003908.01.T01:intron 20.0%
!!! AATTTTCTCATTAATGCAAA+AGG + Chr1:69981311-69981330 None:intergenic 20.0%
!!! AGAATTATCTGAAATTATGA+TGG - Chr1:69980953-69980972 MsG0180003908.01.T01:intron 20.0%
!!! ATTTTCTCATTAATGCAAAA+GGG + Chr1:69981310-69981329 None:intergenic 20.0%
!!! CTGAAAAGGTTTTTATTTTT+TGG + Chr1:69981342-69981361 None:intergenic 20.0%
!!! GAATTGATTTTGACATTATT+TGG + Chr1:69978122-69978141 None:intergenic 20.0%
!!! TAAATTTTGGTTCTACAAAT+AGG - Chr1:69982070-69982089 MsG0180003908.01.T01:CDS 20.0%
!!! TGATTTTGAATGAATTGATT+TGG - Chr1:69977934-69977953 MsG0180003908.01.T01:intron 20.0%
!!! TTTTATTTTTTAATGGCAGT+TGG + Chr1:69980598-69980617 None:intergenic 20.0%
! AAAAAAAACAATTTGAGGGT+TGG + Chr1:69978636-69978655 None:intergenic 25.0%
! AACAAAATCTTATTCATCAG+TGG + Chr1:69981696-69981715 None:intergenic 25.0%
! AATTTATAGTTCTTCACGTT+TGG - Chr1:69980419-69980438 MsG0180003908.01.T01:intron 25.0%
! AGAAAAAGCTCAAAGTTATA+TGG + Chr1:69978236-69978255 None:intergenic 25.0%
! AGAATTAACTCCAAATACAA+TGG + Chr1:69978520-69978539 None:intergenic 25.0%
! AGTGCATAAAAAAGAAATGA+AGG + Chr1:69980299-69980318 None:intergenic 25.0%
! ATCTATTTGAAAAGACCTTA+GGG - Chr1:69981129-69981148 MsG0180003908.01.T01:intron 25.0%
! CAAACAACAAACTTACTATA+AGG - Chr1:69977681-69977700 MsG0180003908.01.T01:three_prime_UTR 25.0%
! CAGATATTGATACTTTAATC+TGG - Chr1:69982193-69982212 MsG0180003908.01.T01:five_prime_UTR 25.0%
! CATAAGTGGTTTATAGATTT+GGG + Chr1:69980689-69980708 None:intergenic 25.0%
! GAAAAGCTTACGATAATAAT+AGG - Chr1:69981006-69981025 MsG0180003908.01.T01:intron 25.0%
! GTTCAAAATGCAAAAACAAT+AGG + Chr1:69978669-69978688 None:intergenic 25.0%
! TATCTATTTGAAAAGACCTT+AGG - Chr1:69981128-69981147 MsG0180003908.01.T01:intron 25.0%
! TATTCATCAGTGGTTATAAA+CGG + Chr1:69981686-69981705 None:intergenic 25.0%
! TGTCTACTACAAAATTAGAT+GGG - Chr1:69981160-69981179 MsG0180003908.01.T01:intron 25.0%
! TTGAAATGGAACATTACATT+GGG + Chr1:69982014-69982033 None:intergenic 25.0%
! TTTGTAGAACCAAAATTTAC+GGG + Chr1:69982069-69982088 None:intergenic 25.0%
!! ATAAAAACCTTTTCAGAACA+AGG - Chr1:69981346-69981365 MsG0180003908.01.T01:intron 25.0%
!! TTTTCTCATTAATGCAAAAG+GGG + Chr1:69981309-69981328 None:intergenic 25.0%
!!! ACTGTTTTAATATCTCTTTC+TGG - Chr1:69981243-69981262 MsG0180003908.01.T01:intron 25.0%
!!! TATATGATTTGTTCTGAACA+TGG + Chr1:69980787-69980806 None:intergenic 25.0%
!!! TCATTTCTAGAATGGTAAAA+AGG + Chr1:69980641-69980660 None:intergenic 25.0%
!!! TGAGTTGAACAATAATTTTG+AGG - Chr1:69978009-69978028 MsG0180003908.01.T01:intron 25.0%
!!! TGATTTTTTTGGATATGCAA+TGG - Chr1:69978852-69978871 MsG0180003908.01.T01:intron 25.0%
!!! TTTTTTATGCACTGAAGTTT+AGG - Chr1:69980306-69980325 MsG0180003908.01.T01:intron 25.0%
AAATATTAGACATGAGGATG+GGG - Chr1:69981901-69981920 MsG0180003908.01.T01:CDS 30.0%
AACTGGAAATATTAGACATG+AGG - Chr1:69981895-69981914 MsG0180003908.01.T01:CDS 30.0%
AAGTATCAAGAATGTATCGT+AGG - Chr1:69978970-69978989 MsG0180003908.01.T01:intron 30.0%
AATTAACACGAAACTCCATA+GGG - Chr1:69979135-69979154 MsG0180003908.01.T01:intron 30.0%
AATTGAATGACAATGTGTTG+TGG - Chr1:69977759-69977778 MsG0180003908.01.T01:CDS 30.0%
AGACATTCGTAAAGTATGTT+TGG - Chr1:69979341-69979360 MsG0180003908.01.T01:intron 30.0%
AGCTTCAATAGAATAGCTAA+CGG - Chr1:69981069-69981088 MsG0180003908.01.T01:intron 30.0%
AGGCTAAAAATCAATTGTAG+AGG - Chr1:69978029-69978048 MsG0180003908.01.T01:intron 30.0%
AGTATCAAGAATGTATCGTA+GGG - Chr1:69978971-69978990 MsG0180003908.01.T01:intron 30.0%
ATCCAATATTATCGTTACCT+TGG - Chr1:69981600-69981619 MsG0180003908.01.T01:intron 30.0%
ATTTGAACAGAATTTACCAG+TGG - Chr1:69978167-69978186 MsG0180003908.01.T01:intron 30.0%
CATGTCTAATATTTCCAGTT+GGG + Chr1:69981895-69981914 None:intergenic 30.0%
CCAAATCTATAAACCACTTA+TGG - Chr1:69980687-69980706 MsG0180003908.01.T01:intron 30.0%
CCATAAGTGGTTTATAGATT+TGG + Chr1:69980690-69980709 None:intergenic 30.0%
CTCTAACCTATATGCAATTT+GGG - Chr1:69978769-69978788 MsG0180003908.01.T01:intron 30.0%
CTTCAAATTATCAATTCTGG+AGG - Chr1:69978071-69978090 MsG0180003908.01.T01:intron 30.0%
GAAAAAGTTCTCATTAATGC+AGG + Chr1:69979981-69980000 None:intergenic 30.0%
GAAATATTAGACATGAGGAT+GGG - Chr1:69981900-69981919 MsG0180003908.01.T01:CDS 30.0%
GAATGAAGAGAAAGTTGTTT+GGG + Chr1:69978729-69978748 None:intergenic 30.0%
GATACATTCTTGATACTTAG+TGG + Chr1:69978968-69978987 None:intergenic 30.0%
GTATCTTTGTGCTTAAAATC+AGG + Chr1:69981822-69981841 None:intergenic 30.0%
GTGTCTACTACAAAATTAGA+TGG - Chr1:69981159-69981178 MsG0180003908.01.T01:intron 30.0%
GTTGAAATGGAACATTACAT+TGG + Chr1:69982015-69982034 None:intergenic 30.0%
TAATGCAAGCTGCAAAATAT+TGG + Chr1:69981483-69981502 None:intergenic 30.0%
TATACCAAGAGATATGTGTT+CGG - Chr1:69979263-69979282 MsG0180003908.01.T01:intron 30.0%
TCAGTGCATGAAAAATGAAA+TGG + Chr1:69979573-69979592 None:intergenic 30.0%
TCATGTCTAATATTTCCAGT+TGG + Chr1:69981896-69981915 None:intergenic 30.0%
TCTAACCTATATGCAATTTG+GGG - Chr1:69978770-69978789 MsG0180003908.01.T01:intron 30.0%
TCTATTTGAAAAGACCTTAG+GGG - Chr1:69981130-69981149 MsG0180003908.01.T01:intron 30.0%
TCTCTAACCTATATGCAATT+TGG - Chr1:69978768-69978787 MsG0180003908.01.T01:intron 30.0%
TGAATGAAGAGAAAGTTGTT+TGG + Chr1:69978730-69978749 None:intergenic 30.0%
TGCAATCTTTATCTGATTCT+TGG - Chr1:69979043-69979062 MsG0180003908.01.T01:intron 30.0%
TGTTAACATGCCATTGTATT+TGG - Chr1:69978507-69978526 MsG0180003908.01.T01:intron 30.0%
TTCATTATGTCTGATGACAA+TGG - Chr1:69977866-69977885 MsG0180003908.01.T01:CDS 30.0%
TTGTCAATAAAACTGTGCTT+TGG - Chr1:69981395-69981414 MsG0180003908.01.T01:CDS 30.0%
TTTCTTTATCTGGATCAACA+TGG - Chr1:69981624-69981643 MsG0180003908.01.T01:intron 30.0%
TTTGTTTGTATGATATGTGC+TGG - Chr1:69979087-69979106 MsG0180003908.01.T01:intron 30.0%
! AAGAAGTTTCTAGGTTGAAA+TGG + Chr1:69982028-69982047 None:intergenic 30.0%
! AATGTAAAGTGGGTATTGTT+TGG - Chr1:69977972-69977991 MsG0180003908.01.T01:intron 30.0%
! CATTGGGTTTCAAGTATTAT+CGG - Chr1:69980731-69980750 MsG0180003908.01.T01:intron 30.0%
! CCATTCTAGAAATGATACTT+AGG - Chr1:69980646-69980665 MsG0180003908.01.T01:intron 30.0%
! CCTAAGTATCATTTCTAGAA+TGG + Chr1:69980649-69980668 None:intergenic 30.0%
! GAAATGATACTTAGGCTTTT+CGG - Chr1:69980654-69980673 MsG0180003908.01.T01:intron 30.0%
! GATTTTAAGCACAAAGATAC+TGG - Chr1:69981822-69981841 MsG0180003908.01.T01:intron 30.0%
! GGGAGTATATGTTGTTTAAT+AGG + Chr1:69980527-69980546 None:intergenic 30.0%
! GTGGATTCATTTGACATTTT+GGG - Chr1:69977561-69977580 MsG0180003908.01.T01:three_prime_UTR 30.0%
! GTTAATTAGGTGTTAAGTTG+AGG - Chr1:69981094-69981113 MsG0180003908.01.T01:intron 30.0%
! TAGCTGACTCAATATAATAC+AGG + Chr1:69980168-69980187 None:intergenic 30.0%
! TCATAAACTTGCTTCAAACA+AGG + Chr1:69979013-69979032 None:intergenic 30.0%
! TCTAGTCAATTTTATTAGCC+TGG - Chr1:69982134-69982153 MsG0180003908.01.T01:CDS 30.0%
! TCTTAATGGAAAAGGTACAA+CGG + Chr1:69980078-69980097 None:intergenic 30.0%
! TTAGTTCTTTATGTTTGCAG+AGG - Chr1:69979752-69979771 MsG0180003908.01.T01:intron 30.0%
! TTTAGAACATTAAACCTCGT+AGG - Chr1:69979318-69979337 MsG0180003908.01.T01:intron 30.0%
! TTTTTCATGCACTGAAGTTT+AGG - Chr1:69979578-69979597 MsG0180003908.01.T01:intron 30.0%
!! AAAAGAACCTTGTTCTGAAA+AGG + Chr1:69981356-69981375 None:intergenic 30.0%
!! ATCCATTAAGGATTAGTTTC+TGG - Chr1:69979685-69979704 MsG0180003908.01.T01:intron 30.0%
!! GCTTTTTCTGTTATTGTTTC+AGG - Chr1:69978247-69978266 MsG0180003908.01.T01:intron 30.0%
!! TAATTTCCCCAAGTTTTTAG+AGG + Chr1:69980485-69980504 None:intergenic 30.0%
!! TGTGTTGTGGATTTTTGTTT+AGG - Chr1:69977772-69977791 MsG0180003908.01.T01:CDS 30.0%
!!! ATTTTTTAATGGCAGTTGGA+TGG + Chr1:69980594-69980613 None:intergenic 30.0%
!!! GGTTCTTTTGATTTCATTCT+TGG - Chr1:69981367-69981386 MsG0180003908.01.T01:CDS 30.0%
AAAACTGTGCTTTGGTACAT+TGG - Chr1:69981403-69981422 MsG0180003908.01.T01:CDS 35.0%
AACTGCACAAAGAAGTTTCT+AGG + Chr1:69982037-69982056 None:intergenic 35.0%
AAGTGGTTTATAGATTTGGG+TGG + Chr1:69980686-69980705 None:intergenic 35.0%
AATGAAGGAAACGGCAATAT+TGG + Chr1:69980284-69980303 None:intergenic 35.0%
AATTCTAAACAATGGTAGCC+AGG + Chr1:69982155-69982174 None:intergenic 35.0%
AGCAGCTGAATTTCATTGAT+AGG - Chr1:69977804-69977823 MsG0180003908.01.T01:CDS 35.0%
AGCCAAGGTAACGATAATAT+TGG + Chr1:69981605-69981624 None:intergenic 35.0%
ATACTTGAAACCCAATGCTA+TGG + Chr1:69980728-69980747 None:intergenic 35.0%
ATGTAGTATCTACCTTTAGC+TGG - Chr1:69978198-69978217 MsG0180003908.01.T01:intron 35.0%
CAATTAACACGAAACTCCAT+AGG - Chr1:69979134-69979153 MsG0180003908.01.T01:intron 35.0%
CACAACACAGACATATCATT+AGG + Chr1:69978797-69978816 None:intergenic 35.0%
CACAATCTTCATAGCAAAAG+AGG + Chr1:69979162-69979181 None:intergenic 35.0%
CCAAAGGATGAGATTTATGT+TGG - Chr1:69980366-69980385 MsG0180003908.01.T01:intron 35.0%
CCAACATAAATCTCATCCTT+TGG + Chr1:69980369-69980388 None:intergenic 35.0%
CTCCAGAAACTAATCCTTAA+TGG + Chr1:69979690-69979709 None:intergenic 35.0%
CTTCAATAGAATAGCTAACG+GGG - Chr1:69981071-69981090 MsG0180003908.01.T01:intron 35.0%
GAATATTCAGTGTTCGTCAA+TGG - Chr1:69981028-69981047 MsG0180003908.01.T01:intron 35.0%
GCTTATCTGATTCTGAACAA+GGG + Chr1:69979726-69979745 None:intergenic 35.0%
GCTTCAATAGAATAGCTAAC+GGG - Chr1:69981070-69981089 MsG0180003908.01.T01:intron 35.0%
GGAAATATTAGACATGAGGA+TGG - Chr1:69981899-69981918 MsG0180003908.01.T01:CDS 35.0%
GTGCATGAAAAATGAAATGG+AGG + Chr1:69979570-69979589 None:intergenic 35.0%
GTTATAAACGGAGTTAGACA+TGG + Chr1:69981674-69981693 None:intergenic 35.0%
TAATACAGGCAGCAAGATAT+TGG + Chr1:69980154-69980173 None:intergenic 35.0%
TACTACATACTACAATCCAC+TGG + Chr1:69978186-69978205 None:intergenic 35.0%
TACTTGAAACCCAATGCTAT+GGG + Chr1:69980727-69980746 None:intergenic 35.0%
TATGATATGTGCTGGAAACA+TGG - Chr1:69979095-69979114 MsG0180003908.01.T01:intron 35.0%
TATGCTTCAAATGGTATGAC+TGG - Chr1:69978283-69978302 MsG0180003908.01.T01:intron 35.0%
TATTGGAATTGTTCCCTTCA+CGG + Chr1:69980137-69980156 None:intergenic 35.0%
TGCTTAAAATCAGGAGCTTT+GGG + Chr1:69981813-69981832 None:intergenic 35.0%
TGCTTATCTGATTCTGAACA+AGG + Chr1:69979727-69979746 None:intergenic 35.0%
TGGAGTTTCGTGTTAATTGA+AGG + Chr1:69979133-69979152 None:intergenic 35.0%
TGTAGTATCTACCTTTAGCT+GGG - Chr1:69978199-69978218 MsG0180003908.01.T01:intron 35.0%
TGTTATTGTTTCAGGCAAGA+AGG - Chr1:69978255-69978274 MsG0180003908.01.T01:intron 35.0%
TTCAATAGAATAGCTAACGG+GGG - Chr1:69981072-69981091 MsG0180003908.01.T01:intron 35.0%
TTGGATGGAATTTAACAGCA+GGG + Chr1:69980579-69980598 None:intergenic 35.0%
! ATGCACTGAAGTTTAGGATT+AGG - Chr1:69979584-69979603 MsG0180003908.01.T01:intron 35.0%
! ATGGGTTGTTTATACCTCAA+GGG - Chr1:69981178-69981197 MsG0180003908.01.T01:intron 35.0%
! ATGTTGTTTAATAGGACCTC+AGG + Chr1:69980519-69980538 None:intergenic 35.0%
! ATTAATGCAAAAGGGGTACA+CGG + Chr1:69981302-69981321 None:intergenic 35.0%
! CGTGGATTCATTTGACATTT+TGG - Chr1:69977560-69977579 MsG0180003908.01.T01:three_prime_UTR 35.0%
! GAAGTTTAGGATTAGGAAGA+GGG - Chr1:69979591-69979610 MsG0180003908.01.T01:intron 35.0%
! TCTGAACAAGGTTTTTACGT+TGG - Chr1:69980027-69980046 MsG0180003908.01.T01:intron 35.0%
! TGAAGTTTAGGATTAGGAAG+AGG - Chr1:69979590-69979609 MsG0180003908.01.T01:intron 35.0%
! TGCATTTTGCCCGTAAATTT+TGG - Chr1:69982057-69982076 MsG0180003908.01.T01:CDS 35.0%
! TGTTGTTTAATAGGACCTCA+GGG + Chr1:69980518-69980537 None:intergenic 35.0%
! TTACCTTGGCTTTCTTTATC+TGG - Chr1:69981614-69981633 MsG0180003908.01.T01:intron 35.0%
!! AATTAGGTGTTAAGTTGAGG+AGG - Chr1:69981097-69981116 MsG0180003908.01.T01:intron 35.0%
!! ATCAGATTCATGTTTCTGGT+CGG - Chr1:69977626-69977645 MsG0180003908.01.T01:three_prime_UTR 35.0%
!! ATTAGGTGTTAAGTTGAGGA+GGG - Chr1:69981098-69981117 MsG0180003908.01.T01:intron 35.0%
!! GAGAAAGTTGTTTGGGTTTT+TGG + Chr1:69978722-69978741 None:intergenic 35.0%
!! GATACTGTTGATTCTCTTGA+TGG - Chr1:69977658-69977677 MsG0180003908.01.T01:three_prime_UTR 35.0%
!! GTTGTGGATTTTTGTTTAGG+TGG - Chr1:69977775-69977794 MsG0180003908.01.T01:CDS 35.0%
AAAGCACATATCAACCGTGA+AGG - Chr1:69980120-69980139 MsG0180003908.01.T01:intron 40.0%
AAAGGCTAGTAGAAAGAGCA+TGG + Chr1:69978571-69978590 None:intergenic 40.0%
AAGCACATATCAACCGTGAA+GGG - Chr1:69980121-69980140 MsG0180003908.01.T01:intron 40.0%
AAGGCGAGTTATGCTTCAAA+TGG - Chr1:69978274-69978293 MsG0180003908.01.T01:intron 40.0%
ACATTACATTGGGCAAGGTT+TGG + Chr1:69982004-69982023 None:intergenic 40.0%
AGGTTTCCCTATTACAAGGT+TGG - Chr1:69980337-69980356 MsG0180003908.01.T01:intron 40.0%
AGTGTTCGTCAATGGAAAAC+TGG - Chr1:69981036-69981055 MsG0180003908.01.T01:intron 40.0%
AGTGTTTGCATGAGACATCT+GGG - Chr1:69980880-69980899 MsG0180003908.01.T01:intron 40.0%
ATAGCTAACGGGGGTTAATT+AGG - Chr1:69981081-69981100 MsG0180003908.01.T01:intron 40.0%
ATGGAACATTACATTGGGCA+AGG + Chr1:69982009-69982028 None:intergenic 40.0%
CAAGTCCCAACCTTGTAATA+GGG + Chr1:69980346-69980365 None:intergenic 40.0%
CCACAGTACAAGGTTTATGT+CGG - Chr1:69979647-69979666 MsG0180003908.01.T01:intron 40.0%
CTTATACCGGTCAAAATGGT+AGG - Chr1:69981925-69981944 MsG0180003908.01.T01:CDS 40.0%
GAGGAAATCATTGAAAGCAG+TGG + Chr1:69979551-69979570 None:intergenic 40.0%
GATCCAGATAAAGAAAGCCA+AGG + Chr1:69981620-69981639 None:intergenic 40.0%
GCAAAGCACATCAAAAGTGA+AGG - Chr1:69981449-69981468 MsG0180003908.01.T01:CDS 40.0%
GCTTAAAATCAGGAGCTTTG+GGG + Chr1:69981812-69981831 None:intergenic 40.0%
GCTTCTCAACATGTTCAGAA+AGG - Chr1:69977601-69977620 MsG0180003908.01.T01:three_prime_UTR 40.0%
GGGACATTGTTTATAGTCTC+TGG - Chr1:69982091-69982110 MsG0180003908.01.T01:CDS 40.0%
GGTCATCAGATTCATGTTTC+TGG - Chr1:69977622-69977641 MsG0180003908.01.T01:three_prime_UTR 40.0%
GGTTTCCCTATTACAAGGTT+GGG - Chr1:69980338-69980357 MsG0180003908.01.T01:intron 40.0%
GTACATTGGCCAATAAGAAC+TGG - Chr1:69981417-69981436 MsG0180003908.01.T01:CDS 40.0%
GTGCTTAAAATCAGGAGCTT+TGG + Chr1:69981814-69981833 None:intergenic 40.0%
GTGTCTACTGTGAAAGTAGA+GGG + Chr1:69980549-69980568 None:intergenic 40.0%
GTTGGATGGAATTTAACAGC+AGG + Chr1:69980580-69980599 None:intergenic 40.0%
GTTGTTTAATAGGACCTCAG+GGG + Chr1:69980517-69980536 None:intergenic 40.0%
TAGGACCCCAAATTGCATAT+AGG + Chr1:69978778-69978797 None:intergenic 40.0%
TAGTGTTTGCATGAGACATC+TGG - Chr1:69980879-69980898 MsG0180003908.01.T01:intron 40.0%
TGCAAGTAGCCAGTTCTTAT+TGG + Chr1:69981429-69981448 None:intergenic 40.0%
TGCGTCTTCACAAACATTTC+TGG - Chr1:69981770-69981789 MsG0180003908.01.T01:intron 40.0%
TGGATGGAATTTAACAGCAG+GGG + Chr1:69980578-69980597 None:intergenic 40.0%
TGGTAGGTTTCCCTATTACA+AGG - Chr1:69980333-69980352 MsG0180003908.01.T01:intron 40.0%
TGTCTACTGTGAAAGTAGAG+GGG + Chr1:69980548-69980567 None:intergenic 40.0%
TGTGTCTACTGTGAAAGTAG+AGG + Chr1:69980550-69980569 None:intergenic 40.0%
! ACTACGCCTCTAAAAACTTG+GGG - Chr1:69980476-69980495 MsG0180003908.01.T01:intron 40.0%
! AGACTACGCCTCTAAAAACT+TGG - Chr1:69980474-69980493 MsG0180003908.01.T01:intron 40.0%
! ATGAGACATCTGGGATTAAG+AGG - Chr1:69980889-69980908 MsG0180003908.01.T01:intron 40.0%
! CAGCTGACTCTTAATGGAAA+AGG + Chr1:69980086-69980105 None:intergenic 40.0%
! CTGAAGTTTAGGACAATGGT+AGG - Chr1:69980317-69980336 MsG0180003908.01.T01:intron 40.0%
! CTTGTGCTCTTTTCCATAAG+TGG + Chr1:69980703-69980722 None:intergenic 40.0%
! GACTACGCCTCTAAAAACTT+GGG - Chr1:69980475-69980494 MsG0180003908.01.T01:intron 40.0%
! TACAGTCAGCTGACTCTTAA+TGG + Chr1:69980092-69980111 None:intergenic 40.0%
! TAGTAGAAAGAGCATGGTTG+AGG + Chr1:69978565-69978584 None:intergenic 40.0%
! TGCACTGAAGTTTAGGACAA+TGG - Chr1:69980313-69980332 MsG0180003908.01.T01:intron 40.0%
! TTTAGGATTAGGAAGAGGGT+AGG - Chr1:69979595-69979614 MsG0180003908.01.T01:intron 40.0%
!! AAATGGTATGACTGGTTCTG+TGG - Chr1:69978291-69978310 MsG0180003908.01.T01:intron 40.0%
!! GATGGGTTGTTTATACCTCA+AGG - Chr1:69981177-69981196 MsG0180003908.01.T01:intron 40.0%
!! TAAAAAGCGTTCCCAGCTAA+AGG + Chr1:69978213-69978232 None:intergenic 40.0%
!! TCTACTAGCCTTTCAATCAG+TGG - Chr1:69978578-69978597 MsG0180003908.01.T01:intron 40.0%
!! TTGCGAAGCGTTTTTCTTGA+CGG + Chr1:69977536-69977555 None:intergenic 40.0%
AAAACGCTTCGCAAATGTCG+TGG - Chr1:69977542-69977561 MsG0180003908.01.T01:three_prime_UTR 45.0%
AAATCGAACACCCTGATCCA+AGG - Chr1:69979514-69979533 MsG0180003908.01.T01:intron 45.0%
AAGATACTGGAGAAGCTCTG+TGG - Chr1:69981835-69981854 MsG0180003908.01.T01:intron 45.0%
AAGCTTTCTTTGCCAACCCA+GGG - Chr1:69978326-69978345 MsG0180003908.01.T01:intron 45.0%
AAGTCCTAAGCCTAGAAACC+GGG + Chr1:69979624-69979643 None:intergenic 45.0%
AATCGAACACCCTGATCCAA+GGG - Chr1:69979515-69979534 MsG0180003908.01.T01:intron 45.0%
AATTACACTGACCTCCCTTG+AGG + Chr1:69981195-69981214 None:intergenic 45.0%
AGCACAAGACCCATAGCATT+GGG - Chr1:69980715-69980734 MsG0180003908.01.T01:intron 45.0%
ATCTGCGCTCACCATATCTA+CGG + Chr1:69981955-69981974 None:intergenic 45.0%
CAAGTCCTAAGCCTAGAAAC+CGG + Chr1:69979625-69979644 None:intergenic 45.0%
CATAGCAAAAGAGGTCCCTA+TGG + Chr1:69979153-69979172 None:intergenic 45.0%
CCGACATAAACCTTGTACTG+TGG + Chr1:69979650-69979669 None:intergenic 45.0%
CTTTACGAATGTCTCCTACG+AGG + Chr1:69979335-69979354 None:intergenic 45.0%
GAGTATGCAGTATGCCAACA+GGG + Chr1:69979959-69979978 None:intergenic 45.0%
GCAAGTCCCAACCTTGTAAT+AGG + Chr1:69980347-69980366 None:intergenic 45.0%
GGTTGTTTATACCTCAAGGG+AGG - Chr1:69981181-69981200 MsG0180003908.01.T01:intron 45.0%
GTAGACACTAATCTCCCCTA+AGG + Chr1:69981147-69981166 None:intergenic 45.0%
GTCTACTGTGAAAGTAGAGG+GGG + Chr1:69980547-69980566 None:intergenic 45.0%
GTTGCCGAACACATATCTCT+TGG + Chr1:69979270-69979289 None:intergenic 45.0%
! ATGAGGATGGGGTCTTATAC+CGG - Chr1:69981912-69981931 MsG0180003908.01.T01:CDS 45.0%
! GGGTCTTATACCGGTCAAAA+TGG - Chr1:69981921-69981940 MsG0180003908.01.T01:CDS 45.0%
!! AATTACACTGACTTCCCCTG+AGG - Chr1:69980500-69980519 MsG0180003908.01.T01:intron 45.0%
!! ACTAGCCTTTCAATCAGTGG+CGG - Chr1:69978581-69978600 MsG0180003908.01.T01:intron 45.0%
!! CATTTCTGGTAACTTCGCAG+AGG - Chr1:69981784-69981803 MsG0180003908.01.T01:intron 45.0%
!! CTGGTTCTGTGGTGGAATTA+TGG - Chr1:69978302-69978321 MsG0180003908.01.T01:intron 45.0%
!!! TGTTTGGGTTTTTGGCTAGC+TGG + Chr1:69978714-69978733 None:intergenic 45.0%
!! TTGAATATAATATTATTATA+AGG - Chr1:69979406-69979425 MsG0180003908.01.T01:intron 5.0%
!!! TTTTTGTTTTTATTTTTTAA+TGG + Chr1:69980605-69980624 None:intergenic 5.0%
ACAAGGTTGGGACTTGCCAA+AGG - Chr1:69980350-69980369 MsG0180003908.01.T01:intron 50.0%
ACCATGGGTCAAATCCCAAC+TGG - Chr1:69981878-69981897 MsG0180003908.01.T01:CDS 50.0%
AGCTTTCTTTGCCAACCCAG+GGG - Chr1:69978327-69978346 MsG0180003908.01.T01:intron 50.0%
AGTTGGGATTTGACCCATGG+TGG + Chr1:69981879-69981898 None:intergenic 50.0%
ATGGTAGATCCACTCCACCA+TGG - Chr1:69981862-69981881 MsG0180003908.01.T01:CDS 50.0%
CAAGCTTTCTTTGCCAACCC+AGG - Chr1:69978325-69978344 MsG0180003908.01.T01:intron 50.0%
CAGTATGCCAACAGGGTTGA+CGG + Chr1:69979952-69979971 None:intergenic 50.0%
GAGCACAAGACCCATAGCAT+TGG - Chr1:69980714-69980733 MsG0180003908.01.T01:intron 50.0%
GGAGTATGCAGTATGCCAAC+AGG + Chr1:69979960-69979979 None:intergenic 50.0%
GTGGGACAATAGGAGGAACA+AGG - Chr1:69978354-69978373 MsG0180003908.01.T01:intron 50.0%
TCCAGTTGGGATTTGACCCA+TGG + Chr1:69981882-69981901 None:intergenic 50.0%
TCTGCGCTCACCATATCTAC+GGG + Chr1:69981954-69981973 None:intergenic 50.0%
TCTTGATCATGTGACCGCAC+CGG + Chr1:69977839-69977858 None:intergenic 50.0%
TGGTAGATCCACTCCACCAT+GGG - Chr1:69981863-69981882 MsG0180003908.01.T01:CDS 50.0%
TGGTAGGATGCCCGTAGATA+TGG - Chr1:69981941-69981960 MsG0180003908.01.T01:intron 50.0%
! GGAGAAGCTCTGTGGATTGA+TGG - Chr1:69981843-69981862 MsG0180003908.01.T01:intron 50.0%
!! AGGTGTTAAGTTGAGGAGGG+AGG - Chr1:69981101-69981120 MsG0180003908.01.T01:intron 50.0%
!! GGGCATCCTACCATTTTGAC+CGG + Chr1:69981934-69981953 None:intergenic 50.0%
!! TGGTATGACTGGTTCTGTGG+TGG - Chr1:69978294-69978313 MsG0180003908.01.T01:intron 50.0%
AGGACTTGCGCCACAGTACA+AGG - Chr1:69979637-69979656 MsG0180003908.01.T01:intron 55.0%
CAAACAGCCGTCAACCCTGT+TGG - Chr1:69979942-69979961 MsG0180003908.01.T01:intron 55.0%
CATTGATAGGAGTGACGCGC+CGG - Chr1:69977817-69977836 MsG0180003908.01.T01:CDS 55.0%
TAGGAAGAGGGTAGGTTGCC+CGG - Chr1:69979603-69979622 MsG0180003908.01.T01:intron 55.0%
TATTGTCCCACCACTCCCCT+GGG + Chr1:69978345-69978364 None:intergenic 55.0%
TGCATCCCCTCACCACAATG+TGG + Chr1:69978609-69978628 None:intergenic 55.0%
TTGAAAGCAGTGGCGTTGCC+AGG + Chr1:69979541-69979560 None:intergenic 55.0%
! GGATTTGACCCATGGTGGAG+TGG + Chr1:69981874-69981893 None:intergenic 55.0%
! GTTGCCCGGTTTCTAGGCTT+AGG - Chr1:69979617-69979636 MsG0180003908.01.T01:intron 55.0%
! TGGCTCCGCCACTGATTGAA+AGG + Chr1:69978589-69978608 None:intergenic 55.0%
AACACCCTGATCCAAGGGCC+TGG - Chr1:69979520-69979539 MsG0180003908.01.T01:intron 60.0%
CGGAGCCACATTGTGGTGAG+GGG - Chr1:69978601-69978620 MsG0180003908.01.T01:intron 60.0%
CTATTGTCCCACCACTCCCC+TGG + Chr1:69978346-69978365 None:intergenic 60.0%
GCGGAGCCACATTGTGGTGA+GGG - Chr1:69978600-69978619 MsG0180003908.01.T01:intron 60.0%
GGGTAGGTTGCCCGGTTTCT+AGG - Chr1:69979611-69979630 MsG0180003908.01.T01:intron 60.0%
GTTGCCAGGCCCTTGGATCA+GGG + Chr1:69979527-69979546 None:intergenic 60.0%
TCTTTGCCAACCCAGGGGAG+TGG - Chr1:69978332-69978351 MsG0180003908.01.T01:intron 60.0%
! CAGGGGAGTGGTGGGACAAT+AGG - Chr1:69978344-69978363 MsG0180003908.01.T01:intron 60.0%
! GGGAGTGGTGGGACAATAGG+AGG - Chr1:69978347-69978366 MsG0180003908.01.T01:intron 60.0%
! TCAGTGGCGGAGCCACATTG+TGG - Chr1:69978594-69978613 MsG0180003908.01.T01:intron 60.0%
CGTTGCCAGGCCCTTGGATC+AGG + Chr1:69979528-69979547 None:intergenic 65.0%
GGCGGAGCCACATTGTGGTG+AGG - Chr1:69978599-69978618 MsG0180003908.01.T01:intron 65.0%
TGCCAACCCAGGGGAGTGGT+GGG - Chr1:69978336-69978355 MsG0180003908.01.T01:intron 65.0%
TTGCCAACCCAGGGGAGTGG+TGG - Chr1:69978335-69978354 MsG0180003908.01.T01:intron 65.0%
! ATAGGAGTGACGCGCCGGTG+CGG - Chr1:69977822-69977841 MsG0180003908.01.T01:CDS 65.0%
CAGTGGCGTTGCCAGGCCCT+TGG + Chr1:69979534-69979553 None:intergenic 70.0%
GTCCCACCACTCCCCTGGGT+TGG + Chr1:69978341-69978360 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 69977506 69982232 69977506 ID=MsG0180003908.01;Name=MsG0180003908.01
Chr1 mRNA 69977506 69982232 69977506 ID=MsG0180003908.01.T01;Parent=MsG0180003908.01;Name=MsG0180003908.01.T01;_AED=0.48;_eAED=0.48;_QI=50|1|1|1|1|0.75|4|240|178
Chr1 exon 69977506 69977934 69977506 ID=MsG0180003908.01.T01:exon:52285;Parent=MsG0180003908.01.T01
Chr1 exon 69981363 69981469 69981363 ID=MsG0180003908.01.T01:exon:52284;Parent=MsG0180003908.01.T01
Chr1 exon 69981851 69981944 69981851 ID=MsG0180003908.01.T01:exon:52283;Parent=MsG0180003908.01.T01
Chr1 exon 69982036 69982232 69982036 ID=MsG0180003908.01.T01:exon:52282;Parent=MsG0180003908.01.T01
Chr1 five_prime_UTR 69982183 69982232 69982183 ID=MsG0180003908.01.T01:five_prime_utr;Parent=MsG0180003908.01.T01
Chr1 CDS 69982036 69982182 69982036 ID=MsG0180003908.01.T01:cds;Parent=MsG0180003908.01.T01
Chr1 CDS 69981851 69981944 69981851 ID=MsG0180003908.01.T01:cds;Parent=MsG0180003908.01.T01
Chr1 CDS 69981363 69981469 69981363 ID=MsG0180003908.01.T01:cds;Parent=MsG0180003908.01.T01
Chr1 CDS 69977746 69977934 69977746 ID=MsG0180003908.01.T01:cds;Parent=MsG0180003908.01.T01
Chr1 three_prime_UTR 69977506 69977745 69977506 ID=MsG0180003908.01.T01:three_prime_utr;Parent=MsG0180003908.01.T01
Gene Sequence

>MsG0180003908.01.T01

ATGTCGTGGATTCATTTGACATTTTGGGATGAACTTGCTCATGTTGCTTCTCAACATGTTCAGAAAGGTCATCAGATTCATGTTTCTGGTCGGCTTGTTACTGATACTGTTGATTCTCTTGATGGCAAACAACAAACTTACTATAAGGTGGTTGCTCAGCAGCTGAATTTCATTGATAGGAGTGACGCGCCGGTGCGGTCACATGATCAAGATTTTGATTTCATTATGTCTGATGACAATGGCAAGAAGGCGAGTTATGCTTCAAATGGTATGACTGGTTCTGTGGTGGAATTATGGCAAGCTTTCTTTGCCAACCCAGGGGAGTGGTGGGACAATAGGAGGAACAAGAGGAACCCCAAAGCTCCTGATTTTAAGCACAAAGATACTGGAGAAGCTCTGTGGATTGATGGTAGATCCACTCCACCATGGGTCAAATCCCAACTGGAAATATTAGACATGAGGATGGGGTCTTATACCGGTCAAAATGGTAGGATGCCCGTAGATATGGTGAGCGCAGATGAAATGTTGTCTTTCTAA

Protein sequence

>MsG0180003908.01.T01

MSWIHLTFWDELAHVASQHVQKGHQIHVSGRLVTDTVDSLDGKQQTYYKVVAQQLNFIDRSDAPVRSHDQDFDFIMSDDNGKKASYASNGMTGSVVELWQAFFANPGEWWDNRRNKRNPKAPDFKHKDTGEALWIDGRSTPPWVKSQLEILDMRMGSYTGQNGRMPVDMVSADEMLSF*